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Conserved domains on  [gi|746592962|ref|WP_039619177|]
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MULTISPECIES: flagellar motor stator protein MotA [Campylobacter]

Protein Classification

flagellar motor stator protein MotA( domain architecture ID 10013075)

flagellar motor stator protein MotA is required for rotation of the flagellar motor

Gene Symbol:  motA
Gene Ontology:  GO:0006935|GO:1902600|GO:0120101
PubMed:  32931735|6090403

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK08456 PRK08456
flagellar motor protein MotA; Validated
 1-257 1.83e-169

flagellar motor protein MotA; Validated


:

Pssm-ID: 181434 [Multi-domain]  Cd Length: 257  Bit Score: 468.05  E-value: 1.83e-169
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962   1 MDLSTILGMVLAVVSISVGDILEGGNPLHVLHLSSFLIVVPTAAFCAMTATHKKFVKAAYKELKLAFKGAGVNLSQRIAE 80
Cdd:PRK08456   1 MDLSTILGMVLAVASISVGDILEGGNPLHVIHLSSFIIVVPTALFAAMTATHKKYVKAAYKELKIVFKNPGVNLNERIKQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962  81 LVEYSIIARRDGLLALESKTNEIDNEFLKETMMMMVDGKSVEEIKESMEIQIEEMEEYYKETAEYWIRFGETCPTMGLVG 160
Cdd:PRK08456  81 LVELATLARKDGVLALEGRVAQIEDEFLKNGLSMLVDGKDLEEIKESMEIQIEEMEEYYHGAAHYWITAGETCPTMGLVG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962 161 AVMGLMLALQLLDDPQAMAAGIAGAFTATVTGIFGAYALFGPWGHKIKANAHELIKERIVISHAIVSIAEGANPRDLEAK 240
Cdd:PRK08456 161 AVMGLMLALQKLDNPAEMAAGIAGAFTATVTGIMGSYALFGPWGHKLKAKSKDIIKEKTVILEGILGIAEGANPRDLEEK 240

                        250
                 ....*....|....*..
gi 746592962 241 LFNYLGQGEPRISQFDK 257
Cdd:PRK08456 241 LLNYLSPGEPKKSQFEK 257
 
Name Accession Description Interval E-value
PRK08456 PRK08456
flagellar motor protein MotA; Validated
 1-257 1.83e-169

flagellar motor protein MotA; Validated


Pssm-ID: 181434 [Multi-domain]  Cd Length: 257  Bit Score: 468.05  E-value: 1.83e-169
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962   1 MDLSTILGMVLAVVSISVGDILEGGNPLHVLHLSSFLIVVPTAAFCAMTATHKKFVKAAYKELKLAFKGAGVNLSQRIAE 80
Cdd:PRK08456   1 MDLSTILGMVLAVASISVGDILEGGNPLHVIHLSSFIIVVPTALFAAMTATHKKYVKAAYKELKIVFKNPGVNLNERIKQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962  81 LVEYSIIARRDGLLALESKTNEIDNEFLKETMMMMVDGKSVEEIKESMEIQIEEMEEYYKETAEYWIRFGETCPTMGLVG 160
Cdd:PRK08456  81 LVELATLARKDGVLALEGRVAQIEDEFLKNGLSMLVDGKDLEEIKESMEIQIEEMEEYYHGAAHYWITAGETCPTMGLVG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962 161 AVMGLMLALQLLDDPQAMAAGIAGAFTATVTGIFGAYALFGPWGHKIKANAHELIKERIVISHAIVSIAEGANPRDLEAK 240
Cdd:PRK08456 161 AVMGLMLALQKLDNPAEMAAGIAGAFTATVTGIMGSYALFGPWGHKLKAKSKDIIKEKTVILEGILGIAEGANPRDLEEK 240

                        250
                 ....*....|....*..
gi 746592962 241 LFNYLGQGEPRISQFDK 257
Cdd:PRK08456 241 LLNYLSPGEPKKSQFEK 257
MotA COG1291
Flagellar motor component MotA [Cell motility];
3-249 1.04e-70

Flagellar motor component MotA [Cell motility];


Pssm-ID: 440902 [Multi-domain]  Cd Length: 258  Bit Score: 217.64  E-value: 1.04e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962   3 LSTILGMVLAVVSISVGDILEGGNPLHVLHLSSFLIVVPTAAFCAMTATHKKFVKAAYKELKLAFKGAGVNLSQRIAELV 82
Cdd:COG1291    1 MATIIGLVVGLGAVLGGFLLEGGSLGALIQPPSLLIVFGGTLGAVLISFPLKVLKAALKALKKAFKGKKADYEELIELLV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962  83 EYSIIARRDGLLALESKTNEIDNEFLKETMMMMVDGKSVEEIKESMEIQIEEMEEYYKETAEYWIRFGETCPTMGLVGAV 162
Cdd:COG1291   81 ELAEKARKEGLLALESDIEEIDDPFLRDGLRLVVDGTDPEEIRELLETEIEAMEERHEAGAKVFEAMGDYAPAFGIIGTV 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962 163 MGLMLALQLLDDPQAMAAGIAGAFTATVTGIFGAYALFGPWGHKIKANAHELIKERIVISHAIVSIAEGANPRDLEAKLF 242
Cdd:COG1291  161 LGLIQMLGNLDDPSALGPGIAVALVTTFYGVLLANLFFLPIANKLKRRSEEEVLLREMIIEGLLAIQAGENPRIIEEKLR 240


                 ....*..
gi 746592962 243 NYLGQGE 249
Cdd:COG1291  241 SFLPPSE 247
MotA_ExbB pfam01618
MotA/TolQ/ExbB proton channel family; This family groups together integral membrane proteins ...
 100-215 2.21e-14

MotA/TolQ/ExbB proton channel family; This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.


Pssm-ID: 460268  Cd Length: 120  Bit Score: 67.50  E-value: 2.21e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962  100 TNEIDNEFLKETMMMMVDGKSVEEIKESMEIQIEEMEEYYKETAEYWIRFGETCPTMGLVGAVMGLMLALQLLDD----P 175
Cdd:pfam01618   2 ANSPEDRFLKKGLQLVVDGTDPEEIRRALEEAIDREEERLERGLSILATIGSLAPLLGLLGTVLGLIHAFQNLGDagpgL 81

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 746592962  176 QAMAAGIAGAFTATVTGIFGAyALFGPWGHKIKANAHELI 215
Cdd:pfam01618  82 SALAPGIAEALIATAYGLFVA-IPALPFYNKLKRRSEREV 120
 
Name Accession Description Interval E-value
PRK08456 PRK08456
flagellar motor protein MotA; Validated
 1-257 1.83e-169

flagellar motor protein MotA; Validated


Pssm-ID: 181434 [Multi-domain]  Cd Length: 257  Bit Score: 468.05  E-value: 1.83e-169
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962   1 MDLSTILGMVLAVVSISVGDILEGGNPLHVLHLSSFLIVVPTAAFCAMTATHKKFVKAAYKELKLAFKGAGVNLSQRIAE 80
Cdd:PRK08456   1 MDLSTILGMVLAVASISVGDILEGGNPLHVIHLSSFIIVVPTALFAAMTATHKKYVKAAYKELKIVFKNPGVNLNERIKQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962  81 LVEYSIIARRDGLLALESKTNEIDNEFLKETMMMMVDGKSVEEIKESMEIQIEEMEEYYKETAEYWIRFGETCPTMGLVG 160
Cdd:PRK08456  81 LVELATLARKDGVLALEGRVAQIEDEFLKNGLSMLVDGKDLEEIKESMEIQIEEMEEYYHGAAHYWITAGETCPTMGLVG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962 161 AVMGLMLALQLLDDPQAMAAGIAGAFTATVTGIFGAYALFGPWGHKIKANAHELIKERIVISHAIVSIAEGANPRDLEAK 240
Cdd:PRK08456 161 AVMGLMLALQKLDNPAEMAAGIAGAFTATVTGIMGSYALFGPWGHKLKAKSKDIIKEKTVILEGILGIAEGANPRDLEEK 240

                        250
                 ....*....|....*..
gi 746592962 241 LFNYLGQGEPRISQFDK 257
Cdd:PRK08456 241 LLNYLSPGEPKKSQFEK 257
MotA COG1291
Flagellar motor component MotA [Cell motility];
3-249 1.04e-70

Flagellar motor component MotA [Cell motility];


Pssm-ID: 440902 [Multi-domain]  Cd Length: 258  Bit Score: 217.64  E-value: 1.04e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962   3 LSTILGMVLAVVSISVGDILEGGNPLHVLHLSSFLIVVPTAAFCAMTATHKKFVKAAYKELKLAFKGAGVNLSQRIAELV 82
Cdd:COG1291    1 MATIIGLVVGLGAVLGGFLLEGGSLGALIQPPSLLIVFGGTLGAVLISFPLKVLKAALKALKKAFKGKKADYEELIELLV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962  83 EYSIIARRDGLLALESKTNEIDNEFLKETMMMMVDGKSVEEIKESMEIQIEEMEEYYKETAEYWIRFGETCPTMGLVGAV 162
Cdd:COG1291   81 ELAEKARKEGLLALESDIEEIDDPFLRDGLRLVVDGTDPEEIRELLETEIEAMEERHEAGAKVFEAMGDYAPAFGIIGTV 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962 163 MGLMLALQLLDDPQAMAAGIAGAFTATVTGIFGAYALFGPWGHKIKANAHELIKERIVISHAIVSIAEGANPRDLEAKLF 242
Cdd:COG1291  161 LGLIQMLGNLDDPSALGPGIAVALVTTFYGVLLANLFFLPIANKLKRRSEEEVLLREMIIEGLLAIQAGENPRIIEEKLR 240


                 ....*..
gi 746592962 243 NYLGQGE 249
Cdd:COG1291  241 SFLPPSE 247
motC PRK09109
flagellar motor protein; Reviewed
 1-245 3.30e-50

flagellar motor protein; Reviewed


Pssm-ID: 181654 [Multi-domain]  Cd Length: 246  Bit Score: 164.73  E-value: 3.30e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962   1 MDLSTILGMVLAVVSISVGDILEGGNPLHVLHLSSFLIVVPTAAFCAMTATHKKFVKAAYKELKLAFKGAGVNLSQRIAE 80
Cdd:PRK09109   1 MDVLSLIGLILAFVAIIGGQVLEGGHLGSLLNGPAFLIVIGGTLGAVLLQTPLAVFKRAFKILRWVFFPPRSDLEGGIDR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962  81 LVEYSIIARRDGLLALESKTNEIDNEFLKETMMMMVDGKSVEEIKESMEIQIEEMEEYYKETAEYWIRFGETCPTMGLVG 160
Cdd:PRK09109  81 IVEWSNTARKEGLLGLEDVADREPDPFARKGLQLLVDGAEPESIRSVLEVEIDTQEHRDLQAAKVFESMGGYAPTIGIIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962 161 AVMGLMLALQLLDDPQAMAAGIAGAFTATVTGIFGAYALFGPWGHKIKANAHELIKERIVISHAIVSIAEGANPRDLEAK 240
Cdd:PRK09109 161 AVMGLIHVMENLADPSQLGSGIAVAFVATIYGVASANLLFLPVANKLKSIIHRQSRYREMLVEGLVAIAEGENPRSIELK 240


                 ....*
gi 746592962 241 LFNYL 245
Cdd:PRK09109 241 LQGYL 245
PRK08124 PRK08124
flagellar motor protein MotA; Validated
 1-245 2.36e-47

flagellar motor protein MotA; Validated


Pssm-ID: 181238 [Multi-domain]  Cd Length: 263  Bit Score: 157.81  E-value: 2.36e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962   1 MDLSTILGMVLAVVSISVGDILEGGNPLHVLHLSSFLIVVPTAAFCAMTATHKKFVKAAYKELKLAFKGAGV-NLSQRIA 79
Cdd:PRK08124   1 MDITTIIGLILGLIAVVVGMVVKGASLAVLLNPAAILIIIVGTIAAVMIAFPMSELKKVPKLFKVLFKEKKDpSKEELIE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962  80 ELVEYSIIARRDGLLALESKTNEIDNEFLKETMMMMVDGKSVEEIKESMEIQIEEMEEYYKETAEYWIRFGETCPTMGLV 159
Cdd:PRK08124  81 QFVEWASESRREGLLALEAQLDEIDDPFLKRGLKMVIDGQSPEFIRDVLEEEIEAMEERHAAGAAIFTQAGTYAPTLGVL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962 160 GAVMGLMLALQLLDDPQAMAAGIAGAFTATVTGIFGAYALFGPWGHKIKANAHELIKERIVISHAIVSIAEGANPRDLEA 239
Cdd:PRK08124 161 GAVIGLIAALGNLSDIEKLGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKEEIELKYIIIEGVLAIQEGNAPRVIEE 240


                 ....*.
gi 746592962 240 KLFNYL 245
Cdd:PRK08124 241 KLLGYL 246
PRK08990 PRK08990
flagellar motor protein PomA; Reviewed
 1-257 1.16e-27

flagellar motor protein PomA; Reviewed


Pssm-ID: 181604 [Multi-domain]  Cd Length: 254  Bit Score: 106.66  E-value: 1.16e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962   1 MDLSTILGMVLAVVSIsVGDILEGGNPLHVLHLSSFLIVVPTAAF-CAMTATHKKFVKAAYKELKlAFKGAGVNLSQRIA 79
Cdd:PRK08990   1 MDLATLIGLIGAFAFV-IMAMVLGGGIGMFVDVPSILIVFGGSLFvVLMKFNLGQFFGAVKIAGK-AFMFKIDKPEDLIE 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962  80 ELVEYSIIARRDGLLALESKtnEIDNEFLKETMMMMVDGKSVEEIKESMEIQIEEMEEYYKETAEYWIRFGETCPTMGLV 159
Cdd:PRK08990  79 QIVEMADAARKGGFLALEEA--EISNSFMQKGVDLLVDGHDGDVVRAALEKDIALTEERHETGIGIFRAFGDVAPAMGMI 156

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962 160 GAVMGLMLALQLLDDPQAMAAGIAGAFTATVTGIFGAYALFGPWGHKIKANAHELIKERIVISHAIVSIAEGANPRDLEA 239
Cdd:PRK08990 157 GTLIGLVAMLSNMDDPKSIGPAMAVALLTTLYGAVLANMVAIPIADKLSLRMGEEMLNRNLIMDAVLAIQDGQNPRVIEG 236

                        250
                 ....*....|....*...
gi 746592962 240 KLFNYLGQGEPRISQFDK 257
Cdd:PRK08990 237 FLKNYLAEKKRKIDTTDG 254
PRK06926 PRK06926
flagellar motor protein MotP; Reviewed
 2-241 3.80e-25

flagellar motor protein MotP; Reviewed


Pssm-ID: 180755 [Multi-domain]  Cd Length: 271  Bit Score: 100.17  E-value: 3.80e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962   2 DLSTILGMVLAVVSISVGdILEGGNP---LHVLHLSSFLIVVpTAAFCAMTATHK-KFVKAAYKELKLAFKGAGVNLSQR 77
Cdd:PRK06926   5 DYLTPVGIFLGITIVVLG-VISNSGLsgfLSFIDLTSILIVT-GGLCAALFISFSpKDLKLAPRVLKQAFQSQEDDVEEL 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962  78 IAELVEYSIIARRDGLLALESKTNEIDNEFLKETMMMMVDGKSVEEIKESMEIQIEEMEEYYKETAEYWIRFGETCPTMG 157
Cdd:PRK06926  83 VQTFVSLSEKARREGLLSLEAELEEVKDPFIKKGLLLAIDGWEPETIRDIMMAEIAAMEERHRKGRRIFEKAGEYAPAWG 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962 158 LVGAVMGLMLALQLLDDPQAMAAGIAGAFTATVTGIFGAYALFGPWGHKIKANAHELIKERIVISHAIVSIAEGANPRDL 237
Cdd:PRK06926 163 MIGTLVGLVLMLKNLNDPSTLGPNMAIALLTTLYGTLLANLVFLPIAAKLEEKTEEEVFVKQVIIEGVIGVQSGQNPRIL 242


                 ....
gi 746592962 238 EAKL 241
Cdd:PRK06926 243 EEKL 246
PRK06743 PRK06743
flagellar motor protein MotP; Reviewed
 10-245 2.13e-16

flagellar motor protein MotP; Reviewed


Pssm-ID: 136027  Cd Length: 254  Bit Score: 76.17  E-value: 2.13e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962  10 VLAVVSISVGDILEGGNPL----HVLHLSSFLIVVPTAAFCAMTATHKKFVKAAYKELKLAFKGAGVNLSQRIAELVEYS 85
Cdd:PRK06743   3 IIVGFAIVIAAIMLGGGGIkafkNFLDVSSILIVIGGTTATIVVAYRFGEIKKYTKSIFTVLHRREEDLEQLTDLFVDFS 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962  86 IIARRDGLLALESKTNEIDNEFLKETMMMMVDGKSVEEIKESMEIQIEEMEEYYKETAEYWIRFGETCPTMGLVGAVMGL 165
Cdd:PRK06743  83 KKSKKHGLLSLEVDGEQVDNPFIQKGIRLMLSGYDEDELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLIGL 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962 166 MLALQLLDDPQAMAAGIAGAFTATVTGIFGAYALFGPWGHKIKANAHELIKERIVISHAIVSIAEGANPRDLEAKLFNYL 245
Cdd:PRK06743 163 IIMLQNLQDTSQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAISELYRGQIPSKLKLKLDTYV 242
MotA_ExbB pfam01618
MotA/TolQ/ExbB proton channel family; This family groups together integral membrane proteins ...
 100-215 2.21e-14

MotA/TolQ/ExbB proton channel family; This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.


Pssm-ID: 460268  Cd Length: 120  Bit Score: 67.50  E-value: 2.21e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962  100 TNEIDNEFLKETMMMMVDGKSVEEIKESMEIQIEEMEEYYKETAEYWIRFGETCPTMGLVGAVMGLMLALQLLDD----P 175
Cdd:pfam01618   2 ANSPEDRFLKKGLQLVVDGTDPEEIRRALEEAIDREEERLERGLSILATIGSLAPLLGLLGTVLGLIHAFQNLGDagpgL 81

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 746592962  176 QAMAAGIAGAFTATVTGIFGAyALFGPWGHKIKANAHELI 215
Cdd:pfam01618  82 SALAPGIAEALIATAYGLFVA-IPALPFYNKLKRRSEREV 120
PRK09110 PRK09110
flagellar motor stator protein MotA;
6-234 2.36e-12

flagellar motor stator protein MotA;


Pssm-ID: 181655 [Multi-domain]  Cd Length: 283  Bit Score: 65.19  E-value: 2.36e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962   6 ILGMVLAVVSISVGDILEGGNPLHVLHLSSFLIVVPTA--AFCAmtATHKKFVKAAYKELKLAFKGAGVNlSQRIAELVE 83
Cdd:PRK09110   4 IIGYIVVLGSVFGGYLLAGGHLGALIQPAELLIIGGAAlgAFIV--GNPGKAIKATLKALPKLFKGPKYK-KADYMDLLA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962  84 --YSII--ARRDGLLALESktnEIDN--------------------EFLKETMMMMVDG------------KSVEEIKES 127
Cdd:PRK09110  81 llYELLrkARQEGMMALEA---HIENpeespifakypkilkdhhlvDFICDYLRLMISGnmnpheiealmdEEIETHHHE 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 746592962 128 MEIqieemeeyykeTAEYWIRFGETCPTMGLVGAVMGLMLALQLLDDPQAMAAG-IAGAFTATVTGIFGAYALFGPWGHK 206
Cdd:PRK09110 158 AEV-----------PAHALQKVADALPAFGIVAAVLGVVKTMGSIDQPPAVLGAlIGAALVGTFLGILLAYGFVGPLAAR 226

                        250       260
                 ....*....|....*....|....*...
gi 746592962 207 IKANAHELIKERIVISHAIVSIAEGANP 234
Cdd:PRK09110 227 LEQVVEEDTKMYQCIKVTLLASLNGYAP 254
TolQ COG0811
Biopolymer transport protein ExbB/TolQ [Intracellular trafficking, secretion, and vesicular ...
 154-196 6.00e-04

Biopolymer transport protein ExbB/TolQ [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 440573  Cd Length: 199  Bit Score: 39.82  E-value: 6.00e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 746592962 154 PTMGLVGAVMGLMLALQLLD-----DPQAMAAGIAGAFTATVTGIFGA 196
Cdd:COG0811  121 PLLGLLGTVWGMINAFQAIAaagqaDLAVVAGGISEALITTAAGLAVA 168
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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