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Conserved domains on  [gi|754781803|ref|WP_042145651|]
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menaquinol-cytochrome c reductase cytochrome b subunit [Paucisalibacillus sp. EB02]

Protein Classification

cytochrome b/b6( domain architecture ID 11480025)

cytochrome b/b6 (PetB) is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme; cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes; in plants and cyanobacteria, cytochrome b6 is analogous to cytochrome b and contains two chains: helices A-D (encoded by petB) and helices E-H (encoded by petD)

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK03735 PRK03735
cytochrome b6; Provisional
 1-224 8.87e-143

cytochrome b6; Provisional


:

Pssm-ID: 179639  Cd Length: 223  Bit Score: 397.55  E-value: 8.87e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803   1 MLQKIYDWIDERVDITPIWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYL 80
Cdd:PRK03735   1 MLSKVYDWFDERLDITPIWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  81 QTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKKPRELNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGL 160
Cdd:PRK03735  81 QNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRELNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGS 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 754781803 161 QMAEQVPIIGDELKILLAGdDEIVGAQTLTRFFAIHVFFLPGALFALLAIHFVLIRRQGISGPL 224
Cdd:PRK03735 161 QIAEAIPVIGDFIKTLLRG-GEIVGAQTLTRFFAIHVFFLPWALAVLMLAHFLMIRKQGISGPL 223
 
Name Accession Description Interval E-value
PRK03735 PRK03735
cytochrome b6; Provisional
 1-224 8.87e-143

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 397.55  E-value: 8.87e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803   1 MLQKIYDWIDERVDITPIWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYL 80
Cdd:PRK03735   1 MLSKVYDWFDERLDITPIWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  81 QTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKKPRELNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGL 160
Cdd:PRK03735  81 QNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRELNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGS 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 754781803 161 QMAEQVPIIGDELKILLAGdDEIVGAQTLTRFFAIHVFFLPGALFALLAIHFVLIRRQGISGPL 224
Cdd:PRK03735 161 QIAEAIPVIGDFIKTLLRG-GEIVGAQTLTRFFAIHVFFLPWALAVLMLAHFLMIRKQGISGPL 223
cytb_ExtP NF040969
selenite/tellurite reduction operon b-type cytochrome ExtP;
18-223 1.19e-107

selenite/tellurite reduction operon b-type cytochrome ExtP;


Pssm-ID: 468899  Cd Length: 205  Bit Score: 308.07  E-value: 1.19e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  18 IWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQTEVAHGQIVRGMHHWG 97
Cdd:NF040969   1 MLNDLALHLVPRHVPRRALKFSYTWCLGGLTFLLFVILTVTGIFLMFYYVPTPEAAYESVQYLQNEVAFGQLVRNMHHWA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  98 ASVVIVMLLLHTLRVFFQGAYKKPRELNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQMAEQVPIIGDeLKILL 177
Cdd:NF040969  81 ANLMVVMVFLHMLRVFYTGSYKPPREFNWVVGVGLLVLTLGLSFTGYLLPWDQLAYWAVTVGTNIAGSIPVVGT-LLQLL 159

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 754781803 178 AGDDEIVGAQTLTRFFAIHVFFLPGALFALLAIHFVLIRRQGISGP 223
Cdd:NF040969 160 QLGGSEVGAATLTRFYALHVFVLPAALIILMAAHFWRIRKQGISGP 205
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
2-223 4.87e-83

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 252.40  E-value: 4.87e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803   2 LQKIYDWIDERVDITPIWRDIADHEVPEHVNpahhfsaFVYCFGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQ 81
Cdd:COG1290    7 ASGLADWLDERLPLASLVREHLEYPFPKNWN-------FSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIM 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  82 TEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKKPRELNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQ 161
Cdd:COG1290   80 RDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAYKKPRELNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITG 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 754781803 162 MAEQVPIIGDELKILLAGdDEIVGAQTLTRFFAIHVFFLPGALFALLAIHFVLIRRQGISGP 223
Cdd:COG1290  160 LFGAIPVIGTWLVTWLFG-GEFPGDATLNRFFALHVLLLPALLLALVVLHLWLLHRHGHNNP 220
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 33-221 7.61e-45

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 148.29  E-value: 7.61e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  33 PAHHFSAFVYCFGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQTEVAHGQIVRGMHHWGASVVIVMLLLHTLRV 112
Cdd:cd00284   14 PPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRG 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803 113 FFQGAYKKPRELNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQMAEQVPIIGDELKILLAGdDEIVGAQTLTRF 192
Cdd:cd00284   94 LYYGSYKKPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG-GFSVDNATLTRF 172

                        170       180
                 ....*....|....*....|....*....
gi 754781803 193 FAIHvFFLPGALFALLAIHFVLIRRQGIS 221
Cdd:cd00284  173 FALH-FLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
42-219 1.12e-40

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 137.51  E-value: 1.12e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803   42 YCFGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKKP 121
Cdd:pfam00033  14 YNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGGFSYP 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  122 RELNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQMAEQVPIIGDELKILLAGdDEIVGAQTLTRFFAIHvFFLP 201
Cdd:pfam00033  94 RELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWG-SFSVDQATLTRFFSLH-FLLP 171

                         170
                  ....*....|....*...
gi 754781803  202 GALFALLAIHFVLIRRQG 219
Cdd:pfam00033 172 FILAILMLLHLLFLHETG 189
 
Name Accession Description Interval E-value
PRK03735 PRK03735
cytochrome b6; Provisional
 1-224 8.87e-143

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 397.55  E-value: 8.87e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803   1 MLQKIYDWIDERVDITPIWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYL 80
Cdd:PRK03735   1 MLSKVYDWFDERLDITPIWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  81 QTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKKPRELNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGL 160
Cdd:PRK03735  81 QNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRELNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGS 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 754781803 161 QMAEQVPIIGDELKILLAGdDEIVGAQTLTRFFAIHVFFLPGALFALLAIHFVLIRRQGISGPL 224
Cdd:PRK03735 161 QIAEAIPVIGDFIKTLLRG-GEIVGAQTLTRFFAIHVFFLPWALAVLMLAHFLMIRKQGISGPL 223
cytb_ExtP NF040969
selenite/tellurite reduction operon b-type cytochrome ExtP;
18-223 1.19e-107

selenite/tellurite reduction operon b-type cytochrome ExtP;


Pssm-ID: 468899  Cd Length: 205  Bit Score: 308.07  E-value: 1.19e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  18 IWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQTEVAHGQIVRGMHHWG 97
Cdd:NF040969   1 MLNDLALHLVPRHVPRRALKFSYTWCLGGLTFLLFVILTVTGIFLMFYYVPTPEAAYESVQYLQNEVAFGQLVRNMHHWA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  98 ASVVIVMLLLHTLRVFFQGAYKKPRELNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQMAEQVPIIGDeLKILL 177
Cdd:NF040969  81 ANLMVVMVFLHMLRVFYTGSYKPPREFNWVVGVGLLVLTLGLSFTGYLLPWDQLAYWAVTVGTNIAGSIPVVGT-LLQLL 159

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 754781803 178 AGDDEIVGAQTLTRFFAIHVFFLPGALFALLAIHFVLIRRQGISGP 223
Cdd:NF040969 160 QLGGSEVGAATLTRFYALHVFVLPAALIILMAAHFWRIRKQGISGP 205
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
2-223 4.87e-83

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 252.40  E-value: 4.87e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803   2 LQKIYDWIDERVDITPIWRDIADHEVPEHVNpahhfsaFVYCFGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQ 81
Cdd:COG1290    7 ASGLADWLDERLPLASLVREHLEYPFPKNWN-------FSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIM 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  82 TEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKKPRELNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQ 161
Cdd:COG1290   80 RDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAYKKPRELNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITG 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 754781803 162 MAEQVPIIGDELKILLAGdDEIVGAQTLTRFFAIHVFFLPGALFALLAIHFVLIRRQGISGP 223
Cdd:COG1290  160 LFGAIPVIGTWLVTWLFG-GEFPGDATLNRFFALHVLLLPALLLALVVLHLWLLHRHGHNNP 220
petB CHL00070
cytochrome b6
 2-224 9.37e-65

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 199.56  E-value: 9.37e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803   2 LQKIYDWIDERVDITPIWRDIADHEVPEHVNpahhfsaFVYCFGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQ 81
Cdd:CHL00070   1 MSKVYDWFEERLEIQAIADDITSKYVPPHVN-------IFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIM 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  82 TEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKKPRELNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQ 161
Cdd:CHL00070  74 TEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTG 153

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 754781803 162 MAEQVPIIGDELKILLAGDDEiVGAQTLTRFFAIHVFFLPGALFALLAIHFVLIRRQGISGPL 224
Cdd:CHL00070 154 VPEAIPVIGSPLVELLRGSVS-VGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 33-221 7.61e-45

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 148.29  E-value: 7.61e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  33 PAHHFSAFVYCFGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQTEVAHGQIVRGMHHWGASVVIVMLLLHTLRV 112
Cdd:cd00284   14 PPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRG 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803 113 FFQGAYKKPRELNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQMAEQVPIIGDELKILLAGdDEIVGAQTLTRF 192
Cdd:cd00284   94 LYYGSYKKPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG-GFSVDNATLTRF 172

                        170       180
                 ....*....|....*....|....*....
gi 754781803 193 FAIHvFFLPGALFALLAIHFVLIRRQGIS 221
Cdd:cd00284  173 FALH-FLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
42-219 1.12e-40

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 137.51  E-value: 1.12e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803   42 YCFGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKKP 121
Cdd:pfam00033  14 YNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGGFSYP 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  122 RELNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQMAEQVPIIGDELKILLAGdDEIVGAQTLTRFFAIHvFFLP 201
Cdd:pfam00033  94 RELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWG-SFSVDQATLTRFFSLH-FLLP 171

                         170
                  ....*....|....*...
gi 754781803  202 GALFALLAIHFVLIRRQG 219
Cdd:pfam00033 172 FILAILMLLHLLFLHETG 189
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
102-223 6.92e-37

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 126.97  E-value: 6.92e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  102 IVMLLLHTLRVFFQGAYKKPRELNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQMAEQVPIIGDELKILLAGDD 181
Cdd:pfam13631   4 IAAIYVHMLRIFFTGAYRKPRELNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLFGGP 83

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 754781803  182 eIVGAQTLTRFFAIHVFFLPGALFALLAIHFVLIRRQGISGP 223
Cdd:pfam13631  84 -FPGTATIPRFYALHILLLPGLILALIVAHLLLVEKHGQFPP 124
CYTB MTH00145
cytochrome b; Provisional
 44-224 5.67e-32

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 119.62  E-value: 5.67e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  44 FGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKKPRe 123
Cdd:MTH00145  34 FGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICIYLHIGRGLYYGSYLMQH- 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803 124 lNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQMAEQVPIIGDELKILLAGdDEIVGAQTLTRFFAIHvFFLPGA 203
Cdd:MTH00145 113 -TWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWG-GFSVGNATLKRFFSLH-FLLPFV 189

                        170       180
                 ....*....|....*....|.
gi 754781803 204 LFALLAIHFVLIRRQGISGPL 224
Cdd:MTH00145 190 ILGLSVLHLLFLHETGSNNPL 210
CYTB MTH00016
cytochrome b; Validated
 44-224 1.19e-30

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 115.93  E-value: 1.19e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  44 FGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKKPRe 123
Cdd:MTH00016  34 FGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICLYLHIGRGIYYGSYFLME- 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803 124 lNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQMAEQVPIIGDELKILLAGDDEIVGAqTLTRFFAIHvFFLPGA 203
Cdd:MTH00016 113 -TWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNA-TLTRFFALH-FLLPFV 189

                        170       180
                 ....*....|....*....|.
gi 754781803 204 LFALLAIHFVLIRRQGISGPL 224
Cdd:MTH00016 190 IAALSMIHLLFLHQTGSNNPL 210
CYTB MTH00156
cytochrome b; Provisional
 44-224 1.83e-29

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 112.57  E-value: 1.83e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  44 FGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKKPre 123
Cdd:MTH00156  23 FGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYLHIGRGIYYGSYKLK-- 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803 124 LNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQMAEQVPIIGDELKILLAGDDEiVGAQTLTRFFAIHvFFLPGA 203
Cdd:MTH00156 101 HTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFS-VDNATLTRFFTFH-FLLPFI 178

                        170       180
                 ....*....|....*....|.
gi 754781803 204 LFALLAIHFVLIRRQGISGPL 224
Cdd:MTH00156 179 ILAMVMIHLLFLHQTGSNNPL 199
CYTB MTH00191
cytochrome b; Provisional
 44-224 3.79e-29

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 111.55  E-value: 3.79e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  44 FGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKkpRE 123
Cdd:MTH00191  30 FGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIYLHIGRGLYYGSYL--NK 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803 124 LNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQMAEQVPIIGDELKILLAGDDEiVGAQTLTRFFAIHvFFLPGA 203
Cdd:MTH00191 108 ETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFS-VDNATLTRFFTFH-FLLPFL 185

                        170       180
                 ....*....|....*....|.
gi 754781803 204 LFALLAIHFVLIRRQGISGPL 224
Cdd:MTH00191 186 IAALSLIHLLFLHETGSNNPL 206
CYTB MTH00224
cytochrome b; Provisional
 44-224 2.22e-27

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 107.31  E-value: 2.22e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  44 FGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKKPRe 123
Cdd:MTH00224  34 YGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFIYLHVGRGLYYGSFNLSE- 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803 124 lNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQMAEQVPIIGDELKILLAGDDEIVGAqTLTRFFAIHvFFLPGA 203
Cdd:MTH00224 113 -TWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNA-TLNRFFSFH-FLLPFA 189

                        170       180
                 ....*....|....*....|.
gi 754781803 204 LFALLAIHFVLIRRQGISGPL 224
Cdd:MTH00224 190 IMGATILHIMFLHQTGSNNPI 210
CYTB MTH00053
cytochrome b; Provisional
 39-224 6.17e-27

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 105.94  E-value: 6.17e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  39 AFVYCFGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAY 118
Cdd:MTH00053  29 SYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFHIGRGIYYGSY 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803 119 KKprELNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQMAEQVPIIGDELKILLAGDDEIVGAqTLTRFFAIHvF 198
Cdd:MTH00053 109 TK--IIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNA-TLNRFYSLH-Y 184

                        170       180
                 ....*....|....*....|....*.
gi 754781803 199 FLPGALFALLAIHFVLIRRQGISGPL 224
Cdd:MTH00053 185 LLPFILAGLALVHLIALHEDGSNNPI 210
CYTB MTH00119
cytochrome b; Provisional
 44-224 2.73e-26

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 104.21  E-value: 2.73e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  44 FGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYkkpre 123
Cdd:MTH00119  34 FGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSY----- 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803 124 LN---WMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQMAEQVPIIGDELKILLAGDDEIVGAqTLTRFFAIHvFFL 200
Cdd:MTH00119 109 LYketWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNP-TLTRFFALH-FLL 186

                        170       180
                 ....*....|....*....|....
gi 754781803 201 PGALFALLAIHFVLIRRQGISGPL 224
Cdd:MTH00119 187 PFLIAGLTLIHLLFLHETGSNNPL 210
CYTB MTH00131
cytochrome b; Provisional
 44-224 6.35e-26

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 103.19  E-value: 6.35e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  44 FGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKKPRe 123
Cdd:MTH00131  33 FGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLHIGRGLYYGSYLYKE- 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803 124 lNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQMAEQVPIIGDELKILLAGDDEIVGAqTLTRFFAIHvFFLPGA 203
Cdd:MTH00131 112 -TWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNA-TLTRFFAFH-FLFPFV 188

                        170       180
                 ....*....|....*....|.
gi 754781803 204 LFALLAIHFVLIRRQGISGPL 224
Cdd:MTH00131 189 IAAATILHLLFLHETGSNNPL 209
CYTB MTH00100
cytochrome b; Provisional
 44-224 7.36e-25

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 100.48  E-value: 7.36e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  44 FGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKKPRe 123
Cdd:MTH00100  33 FGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSYLFLE- 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803 124 lNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQMAEQVPIIGDELKILLAGDDEIVGAqTLTRFFAIHvFFLPGA 203
Cdd:MTH00100 112 -TWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKA-TLTRFFAFH-FILPFI 188

                        170       180
                 ....*....|....*....|.
gi 754781803 204 LFALLAIHFVLIRRQGISGPL 224
Cdd:MTH00100 189 ITALAMVHLLFLHETGSNNPS 209
CYTB MTH00034
cytochrome b; Validated
 44-224 1.00e-24

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 100.17  E-value: 1.00e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  44 FGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKKprE 123
Cdd:MTH00034  33 FGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICLYFHIGRGLYYGSYVN--I 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803 124 LNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQMAEQVPIIGDELKILLAGDDEIVGAqTLTRFFAIHvFFLPGA 203
Cdd:MTH00034 111 ETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNA-TLTRFFAFH-FLFPFI 188

                        170       180
                 ....*....|....*....|.
gi 754781803 204 LFALLAIHFVLIRRQGISGPL 224
Cdd:MTH00034 189 IAALSIIHLLFLHQTGSNNPT 209
CYTB MTH00022
cytochrome b; Validated
 39-224 5.03e-24

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 98.23  E-value: 5.03e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  39 AFVYCFGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAY 118
Cdd:MTH00022  27 SYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIHIGRGLYYGGY 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803 119 KKPRElnWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQMAEQVPIIGDELKILLAGDDEIVGAqTLTRFFAIHvF 198
Cdd:MTH00022 107 LKFHV--WNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNA-TLNRFFSLH-F 182

                        170       180
                 ....*....|....*....|....*.
gi 754781803 199 FLPGALFALLAIHFVLIRRQGISGPL 224
Cdd:MTH00022 183 LFPFILAFLVIVHLIYLHVDGSNNPI 208
CYTB MTH00033
cytochrome b; Provisional
 39-224 3.63e-23

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 95.78  E-value: 3.63e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  39 AFVYCFGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAY 118
Cdd:MTH00033  25 SYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHIGRGLYYGGY 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803 119 KkpRELNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQMAEQVPIIGDELKILLAGDDEIVGAqTLTRFFAIHvF 198
Cdd:MTH00033 105 S--RVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNC-TLNRFFSLH-Y 180

                        170       180
                 ....*....|....*....|....*.
gi 754781803 199 FLPGALFALLAIHFVLIRRQGISGPL 224
Cdd:MTH00033 181 LLPFVLVGLVLAHLLTLHEKGSNEPL 206
CYTB MTH00074
cytochrome b; Provisional
 44-223 1.90e-22

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 93.59  E-value: 1.90e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  44 FGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKKPRe 123
Cdd:MTH00074  34 FGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICIYLHIGRGLYYGSYMYKE- 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803 124 lNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQMAEQVPIIGDELKILLAGDDEIVGAqTLTRFFAIHvFFLPGA 203
Cdd:MTH00074 113 -TWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKA-TLTRFFAFH-FLLPFL 189

                        170       180
                 ....*....|....*....|
gi 754781803 204 LFALLAIHFVLIRRQGISGP 223
Cdd:MTH00074 190 IAGASIIHLLFLHETGSNNP 209
CYTB MTH00086
cytochrome b; Provisional
 44-224 3.37e-22

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 92.70  E-value: 3.37e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  44 FGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKkpRE 123
Cdd:MTH00086  22 FGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHIFKGLFMMSYR--LK 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803 124 LNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQMAEQVPIIGDELKILLAGDDEIVGAqTLTRFFAIHvFFLPGA 203
Cdd:MTH00086 100 KVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSA-TLKFFFVLH-FLLPWG 177

                        170       180
                 ....*....|....*....|.
gi 754781803 204 LFALLAIHFVLIRRQGISGPL 224
Cdd:MTH00086 178 LLVLVLFHLIFLHSTGSTSSL 198
CYTB MTH00046
cytochrome b; Validated
 42-224 2.19e-19

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 85.03  E-value: 2.19e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803  42 YCFGGLTFFVVVIQILSGMFLTMYYVPDIENAWKSVYYLQTEVAHGQIVRGMHHWGASVVIVMLLLHTLRVFFQGAYKKp 121
Cdd:MTH00046  22 WCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIHMGRALYYSSYSK- 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 754781803 122 rELNWMVGVLIFFVMLGLGFTGYLLPWDNKAYFATQVGLQMAEQVPIIGDELKILLAGDDEIVGAqTLTRFFAIHVfFLP 201
Cdd:MTH00046 101 -KGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGV-TLVRVFSVHI-CLG 177

                        170       180
                 ....*....|....*....|...
gi 754781803 202 GALFALLAIHFVLIRRQGISGPL 224
Cdd:MTH00046 178 FVILGLMVVHLFYLHKSGSSNPL 200
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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