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Conserved domains on  [gi|757130982|ref|WP_042685253|]
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ABC transporter permease [Methermicoccus shengliensis]

Protein Classification

ABC transporter permease( domain architecture ID 11426120)

ABC transporter permease is the transmembrane subunit found in a periplasmic binding protein (PBP)-dependent ABC transport system, which may be involved in the transport of one or more from a variety of substrates including sugars, ions, amino acids, and peptides, among others

Gene Ontology:  GO:0043190|GO:0140359|GO:0042626|GO:0016020
PubMed:  25750732|24638992|18535149|17723295
TCDB:  3.A.1

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 10-258 7.38e-80

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


:

Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 241.58  E-value: 7.38e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  10 MWVVLCLVAMYFALPLLSVVLK---VSMEGFLTSLLSPVVLSSLRLSLLTSTTSLGLSMLFGTPVAYMLARREFVGKRVL 86
Cdd:COG0555   13 LGLTLLYLSLIVLLPLAALVLKaagLGWAEFWAVLTSPRVLAALKLSLGTALIAALINLVFGLPLAWVLVRYRFPGKRLV 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  87 ETLLDLPLVIPPVVAGIALLMAFGRMGVLGSYLHAHGVSIAFTTVAVVMAQTFVAAPFYIKSAKAGFSGVDRRLEQAART 166
Cdd:COG0555   93 DALVDLPFALPTAVAGIALLLLFGPNGWLGQLLAPLGIKVAFTPLGIVLAQTFVSLPFVVRTVQPVLEELDPELEEAAAT 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 167 LGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAGNFMGRTQTMPLAIYSSLQSS-LDSALTLSVILMALS 245
Cdd:COG0555  173 LGASRWQTFRRVILPLLLPALLTGFALAFARALGEFGAVIFIAGNLPMKTEILPLLIYLKLEEGdYAGATAIALVLLLIS 252

                        250
                 ....*....|...
gi 757130982 246 FSILMTVRIAARR 258
Cdd:COG0555  253 FLLLLLINLLQRR 265
 
Name Accession Description Interval E-value
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 10-258 7.38e-80

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 241.58  E-value: 7.38e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  10 MWVVLCLVAMYFALPLLSVVLK---VSMEGFLTSLLSPVVLSSLRLSLLTSTTSLGLSMLFGTPVAYMLARREFVGKRVL 86
Cdd:COG0555   13 LGLTLLYLSLIVLLPLAALVLKaagLGWAEFWAVLTSPRVLAALKLSLGTALIAALINLVFGLPLAWVLVRYRFPGKRLV 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  87 ETLLDLPLVIPPVVAGIALLMAFGRMGVLGSYLHAHGVSIAFTTVAVVMAQTFVAAPFYIKSAKAGFSGVDRRLEQAART 166
Cdd:COG0555   93 DALVDLPFALPTAVAGIALLLLFGPNGWLGQLLAPLGIKVAFTPLGIVLAQTFVSLPFVVRTVQPVLEELDPELEEAAAT 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 167 LGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAGNFMGRTQTMPLAIYSSLQSS-LDSALTLSVILMALS 245
Cdd:COG0555  173 LGASRWQTFRRVILPLLLPALLTGFALAFARALGEFGAVIFIAGNLPMKTEILPLLIYLKLEEGdYAGATAIALVLLLIS 252

                        250
                 ....*....|...
gi 757130982 246 FSILMTVRIAARR 258
Cdd:COG0555  253 FLLLLLINLLQRR 265
modB_ABC TIGR02141
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, ...
 65-258 1.81e-65

molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, of the molybdate ABC transporter. This system has been characterized in E. coli, Staphylococcus carnosus, Rhodobacter capsulatus and Azotobacter vinlandii. Molybdate is chemically similar to sulfate, thiosulfate, and selenate. These related substrates, and sometimes molybdate itself, can be transported by the homologous sulfate receptor. Some apparent molybdenum transport operons include a permease related to this ModB, although less similar than some sulfate permease proteins and not included in this model. [Transport and binding proteins, Anions]


Pssm-ID: 273993 [Multi-domain]  Cd Length: 208  Bit Score: 202.86  E-value: 1.81e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982   65 MLFGTPVAYMLARREFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMGVLGSYLHAHGVSIAFTTVAVVMAQTFVAAPF 144
Cdd:TIGR02141  15 LPLGIPVAWLLARSRFRGKPLLEVLVTLPLVLPPTVLGFYLLIAFGPNGPIGKLLELFGISLVFTFTGAVLASVIVSFPL 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  145 YIKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAGNFMGRTQTMPLAIY 224
Cdd:TIGR02141  95 MVQPIRAAFEAVDPDLEEAARTLGASESQTFLKVTLPLAFPGLLAGAVLSFARALGEFGATLMFAGNIPGETQTIPLAIY 174

                         170       180       190
                  ....*....|....*....|....*....|....
gi 757130982  225 SSLQSSLDSALTLSVILMALSFSILMTVRIAARR 258
Cdd:TIGR02141 175 DAVESDYELAHQLSLVLLAISLIVLLLVELLNKR 208
modB PRK09421
molybdate ABC transporter permease subunit;
67-259 1.89e-54

molybdate ABC transporter permease subunit;


Pssm-ID: 181841  Cd Length: 229  Bit Score: 175.50  E-value: 1.89e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  67 FGTPVAYMLARREFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMGVLGSYLHAH-GVSIAFTTVAVVMAQTFVAAPFY 145
Cdd:PRK09421  28 FGILVAWLLARCRFPGKSLLDSLLHLPLVLPPVVTGYLLLISMGRRGFIGQWLYEWfGISFAFSWRGAALAAAVMAFPLM 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 146 IKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAGNFMGRTQTMPLAIYS 225
Cdd:PRK09421 108 VRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGEFGATITFVSNIPGETQTIPSAMYT 187

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 757130982 226 SLQS--SLDSALTLSVILMALSFSILMTVRIAARRV 259
Cdd:PRK09421 188 LIQTpgGESAAARLCIISIAIALASLLLSEWLARRS 223
tungstate_WtpB NF040839
tungstate ABC transporter permease WtpB;
19-258 1.47e-45

tungstate ABC transporter permease WtpB;


Pssm-ID: 468778  Cd Length: 250  Bit Score: 153.25  E-value: 1.47e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  19 MYFALPLLSVVLKVSMEGFLTSLLSPVVLSSLRLSLLTSTTSLGLSMLFGTPVAYMLARREFVGKRVLETLLDLPLVIPP 98
Cdd:NF040839  15 LFILLPIITMLLNQDPGDLSKALHDPEVIKSLLVSLYAALIATLIALIFGVPLGYILARKDFKGKSFVEAIIDIPIVIPH 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  99 VVAGIALLMAFGRMGVLGsyLHAHGVSIAFTTVAVVMAQTFVAAPFYIKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSI 178
Cdd:NF040839  95 SVVGIMLLVVFYGTGIGG--ASKIGLKIVDNFWGIVVAMLFVSAPFMINSARDGFLSVDEELEHVARTLGASKLRTFFTI 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 179 TLPLSLPSVLTGALMTWARALGEFGATIMFAGNFMgrtqTMPLAIYSS-LQSSLDSALTLSVILMALSFSILMTVRIAAR 257
Cdd:NF040839 173 SLPLAKRSIVSGAIMTWARGISEVGAILIVAYYPK----TAPVLIYERfNNFGLSASKPIAVILILISLALFVILRLLIG 248


                 .
gi 757130982 258 R 258
Cdd:NF040839 249 R 249
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 65-242 4.02e-17

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 76.82  E-value: 4.02e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  65 MLFGTPVAYMLARREFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMGVLGSylhahgVSIAFTTVAVVMAQTFVAAPF 144
Cdd:NF038017  13 ALIGIPLGALLALRRFPGRRLVISLLNTLMGLPPVVVGLIVYLLLSRSGPLGF------LGLLYTPTAMIIAQAVLALPI 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 145 YIKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPsVLTGALMTWARALGEFGATIMFAGNFMGRTQTMPLAIy 224
Cdd:NF038017  87 VAGLTLAAVQGLDPELRLQILSLGATRWQALWTLLKEARFA-LLAAVLAGFGRAISEVGAVMMVGGNIRGYTRVLTTAI- 164

                        170       180
                 ....*....|....*....|.
gi 757130982 225 sSLQSS---LDSALTLSVILM 242
Cdd:NF038017 165 -VLETSkgnFDLALALGIILL 184
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 65-244 4.39e-15

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 71.54  E-value: 4.39e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  65 MLFGTPVAYMLARREFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMGVLGSYLHahgvsiafTTVAVVMAQTFVAAPF 144
Cdd:cd06261   16 LVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPG--------LGLPALILALLLIAPF 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 145 YIKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAGNFMGRTQTMPLAIY 224
Cdd:cd06261   88 ARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGPGTGLLLIF 167

                        170       180
                 ....*....|....*....|
gi 757130982 225 SSLQSSLDSALTLSVILMAL 244
Cdd:cd06261  168 AILFPGDLGVAAAVALILLL 187
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 68-259 2.22e-06

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 46.91  E-value: 2.22e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982   68 GTPVAYMLAR-REFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMgvlgsylhahgvSIAFTTVAVVMAQTFVAAPFYI 146
Cdd:pfam00528   1 GIPLGIIAALrRGRRLDRLLRPLIDLLQALPSFVLAILLVVIAILS------------ILGHGILPAIILALLGWAGYAR 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  147 KSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAGNFMGRTQTMPLAIYSS 226
Cdd:pfam00528  69 LIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGLGLLLIEAILGYD 148

                         170       180       190
                  ....*....|....*....|....*....|...
gi 757130982  227 LQSSLDSALTLSVILMALSFSILMTVRIAARRV 259
Cdd:pfam00528 149 YPEIQGPVLAAALILLLLNLLVDILQRLLDPRV 181
 
Name Accession Description Interval E-value
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 10-258 7.38e-80

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 241.58  E-value: 7.38e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  10 MWVVLCLVAMYFALPLLSVVLK---VSMEGFLTSLLSPVVLSSLRLSLLTSTTSLGLSMLFGTPVAYMLARREFVGKRVL 86
Cdd:COG0555   13 LGLTLLYLSLIVLLPLAALVLKaagLGWAEFWAVLTSPRVLAALKLSLGTALIAALINLVFGLPLAWVLVRYRFPGKRLV 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  87 ETLLDLPLVIPPVVAGIALLMAFGRMGVLGSYLHAHGVSIAFTTVAVVMAQTFVAAPFYIKSAKAGFSGVDRRLEQAART 166
Cdd:COG0555   93 DALVDLPFALPTAVAGIALLLLFGPNGWLGQLLAPLGIKVAFTPLGIVLAQTFVSLPFVVRTVQPVLEELDPELEEAAAT 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 167 LGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAGNFMGRTQTMPLAIYSSLQSS-LDSALTLSVILMALS 245
Cdd:COG0555  173 LGASRWQTFRRVILPLLLPALLTGFALAFARALGEFGAVIFIAGNLPMKTEILPLLIYLKLEEGdYAGATAIALVLLLIS 252

                        250
                 ....*....|...
gi 757130982 246 FSILMTVRIAARR 258
Cdd:COG0555  253 FLLLLLINLLQRR 265
ModB COG4149
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ...
 65-261 3.89e-78

ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis


Pssm-ID: 443320 [Multi-domain]  Cd Length: 223  Bit Score: 235.33  E-value: 3.89e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  65 MLFGTPVAYMLARREFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMGVLGSYLHAH-GVSIAFTTVAVVMAQTFVAAP 143
Cdd:COG4149   24 LLLGIPLAWWLARTRFRGKGLLEALVTLPLVLPPTVLGFYLLLLFGRNGPLGQLLEELfGISLVFTWTGAVLASVVVSLP 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 144 FYIKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAGNFMGRTQTMPLAI 223
Cdd:COG4149  104 LMVQPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAFARALGEFGATLMFAGNIPGKTQTLPLAI 183

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 757130982 224 YSSLQSS-LDSALTLSVILMALSFSILMTVRIAARRVEA 261
Cdd:COG4149  184 YDAVEAGdYAAAHALSLILLAISFVVLLLLNLLNRRRRR 222
modB_ABC TIGR02141
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, ...
 65-258 1.81e-65

molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, of the molybdate ABC transporter. This system has been characterized in E. coli, Staphylococcus carnosus, Rhodobacter capsulatus and Azotobacter vinlandii. Molybdate is chemically similar to sulfate, thiosulfate, and selenate. These related substrates, and sometimes molybdate itself, can be transported by the homologous sulfate receptor. Some apparent molybdenum transport operons include a permease related to this ModB, although less similar than some sulfate permease proteins and not included in this model. [Transport and binding proteins, Anions]


Pssm-ID: 273993 [Multi-domain]  Cd Length: 208  Bit Score: 202.86  E-value: 1.81e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982   65 MLFGTPVAYMLARREFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMGVLGSYLHAHGVSIAFTTVAVVMAQTFVAAPF 144
Cdd:TIGR02141  15 LPLGIPVAWLLARSRFRGKPLLEVLVTLPLVLPPTVLGFYLLIAFGPNGPIGKLLELFGISLVFTFTGAVLASVIVSFPL 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  145 YIKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAGNFMGRTQTMPLAIY 224
Cdd:TIGR02141  95 MVQPIRAAFEAVDPDLEEAARTLGASESQTFLKVTLPLAFPGLLAGAVLSFARALGEFGATLMFAGNIPGETQTIPLAIY 174

                         170       180       190
                  ....*....|....*....|....*....|....
gi 757130982  225 SSLQSSLDSALTLSVILMALSFSILMTVRIAARR 258
Cdd:TIGR02141 175 DAVESDYELAHQLSLVLLAISLIVLLLVELLNKR 208
Mo_ABC_porter TIGR01581
NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively ...
 37-250 1.86e-62

NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively weak homology compared to its neighbor clades, the molybdate (TIGR02141) and sulfate (TIGR00969) porters. Neighbor-Joining, PAM-distance phylogenetic trees support the separation of the clades in this way. Included in this group is a gene designated NifC in Clostridium pasturianum. It would be reasonable to presume that NifC acts as a molybdate porter since the most common form of nitrogenase is a molybdoenzyme. Several other sequences falling within the scope of this model are annotated as molybdate porters and one, from Halobacterium, is annotated as a sulfate porter. There is presently no experimental evidence to support annotations with this degree of specificity.


Pssm-ID: 130643  Cd Length: 225  Bit Score: 195.69  E-value: 1.86e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982   37 FLTSLLSPVVLSSLRLSLLTSTTSLGLSMLFGTPVAYMLARREFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMGVLG 116
Cdd:TIGR01581  10 ILSALTDPENIKALRLSLATSLASLLLAVIIGIPTAYVLARVRFPLKKLLDTLLDLPMVLPPLVAGLALLLLFGRNGLLG 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  117 SYLHAHGVSIAFTTVAVVMAQTFVAAPFYIKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWA 196
Cdd:TIGR01581  90 PYLEAAGIQVIFSTLGVVLAQTFVASPYYVRVARSTFKSVDPRYEDVARSLGAGPLETFRKITLPMARPGLLAGLVLAWA 169

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 757130982  197 RALGEFGATIMFAGNFMGRTQTMPLAIYSSLQS-SLDSALTLSVILMALSFSILM 250
Cdd:TIGR01581 170 RALGEFGATLMFAGSIQGKTRTLPLAIYLNIQSdNIEAAVASALLLLVIAFLLLL 224
modB PRK09421
molybdate ABC transporter permease subunit;
67-259 1.89e-54

molybdate ABC transporter permease subunit;


Pssm-ID: 181841  Cd Length: 229  Bit Score: 175.50  E-value: 1.89e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  67 FGTPVAYMLARREFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMGVLGSYLHAH-GVSIAFTTVAVVMAQTFVAAPFY 145
Cdd:PRK09421  28 FGILVAWLLARCRFPGKSLLDSLLHLPLVLPPVVTGYLLLISMGRRGFIGQWLYEWfGISFAFSWRGAALAAAVMAFPLM 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 146 IKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAGNFMGRTQTMPLAIYS 225
Cdd:PRK09421 108 VRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGEFGATITFVSNIPGETQTIPSAMYT 187

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 757130982 226 SLQS--SLDSALTLSVILMALSFSILMTVRIAARRV 259
Cdd:PRK09421 188 LIQTpgGESAAARLCIISIAIALASLLLSEWLARRS 223
tungstate_WtpB NF040839
tungstate ABC transporter permease WtpB;
19-258 1.47e-45

tungstate ABC transporter permease WtpB;


Pssm-ID: 468778  Cd Length: 250  Bit Score: 153.25  E-value: 1.47e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  19 MYFALPLLSVVLKVSMEGFLTSLLSPVVLSSLRLSLLTSTTSLGLSMLFGTPVAYMLARREFVGKRVLETLLDLPLVIPP 98
Cdd:NF040839  15 LFILLPIITMLLNQDPGDLSKALHDPEVIKSLLVSLYAALIATLIALIFGVPLGYILARKDFKGKSFVEAIIDIPIVIPH 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  99 VVAGIALLMAFGRMGVLGsyLHAHGVSIAFTTVAVVMAQTFVAAPFYIKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSI 178
Cdd:NF040839  95 SVVGIMLLVVFYGTGIGG--ASKIGLKIVDNFWGIVVAMLFVSAPFMINSARDGFLSVDEELEHVARTLGASKLRTFFTI 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 179 TLPLSLPSVLTGALMTWARALGEFGATIMFAGNFMgrtqTMPLAIYSS-LQSSLDSALTLSVILMALSFSILMTVRIAAR 257
Cdd:NF040839 173 SLPLAKRSIVSGAIMTWARGISEVGAILIVAYYPK----TAPVLIYERfNNFGLSASKPIAVILILISLALFVILRLLIG 248


                 .
gi 757130982 258 R 258
Cdd:NF040839 249 R 249
cysT CHL00187
sulfate transport protein; Provisional
 21-228 1.11e-36

sulfate transport protein; Provisional


Pssm-ID: 214388 [Multi-domain]  Cd Length: 237  Bit Score: 129.75  E-value: 1.11e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  21 FALPLLSVVLKVSMEGFLTSL---LSPVVLSSLRLSLLTSTTSLGLSMLFGTPVAYMLARREFVGKRVLETLLDLPLVIP 97
Cdd:CHL00187  25 LVLPILALLIKASQQPWSDFLqkaTEPIALSAYSLTLSMALIAALINGFFGLLIAWVLVRYNFPGKRLLDAAVDLPFALP 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  98 PVVAGIALLMAFGRMGVLGSYLHAHGVSIAFTTVAVVMAQTFVAAPFYIKSAKAGFSGVDRRLEQAARTLGAGQVHTFFS 177
Cdd:CHL00187 105 TSVAGLTLATVYGDNGWIGHLLSHLGIQIVFTKLGVLLAMIFVSFPFVVRTIQPVLQEIEKELEEAAWSLGASPWQTFWK 184

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 757130982 178 ITLPLSLPSVLTGALMTWARALGEFGATIMFAGNFMGRTQTMPLAIYSSLQ 228
Cdd:CHL00187 185 VIFPPLIPALLTGLALTFSRAIGEYGSIVIISSNIPFKDLVASVLIFQSLE 235
3a0106s02 TIGR00969
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and ...
 11-249 1.70e-36

sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulfate ABC transporter. [Transport and binding proteins, Anions]


Pssm-ID: 273370  Cd Length: 271  Bit Score: 130.17  E-value: 1.70e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982   11 WVVLCLVAMYFALPLLSVVLKVSMEGFLTSLLSPVVLSSLRLSLLTSTTSLGLSMLFGTPVAYMLARREFVGKRVLETLL 90
Cdd:TIGR00969  23 LLYVFLILILPVAALFVQAFSKGLGQFWQNATDPIAVSAYNLTLLMALIAVPLNGVFGLLIAWVLTRYQFPGRKLLDALI 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982   91 DLPLVIPPVVAGIALLMAFGRMGVLGSYLHAHGVSIAFTTVAVVMAQTFVAAPFYIKSAKAGFSGVDRRLEQAARTLGAG 170
Cdd:TIGR00969 103 DLPFALSPVVAGLTLALLYGSNGWLGSWLASFGIQIIFTWPGMALAMIFVSLPFVVREVQPVLEELGTEAEEAAATLGAS 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  171 QVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAGNFMGRTQTMPLAIYSSLQS-SLDSALTLSVILMALSFSIL 249
Cdd:TIGR00969 183 GWQTFWRVTLPSIRWALLYGVVLTFARALGEFGAVVVVSGNIPGKTLTLPLLIEERLEQyDYPGAYVIAAVLLLVSLVTL 262
PotC COG1177
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ...
 65-263 2.01e-34

ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];


Pssm-ID: 440790 [Multi-domain]  Cd Length: 262  Bit Score: 124.45  E-value: 2.01e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  65 MLFGTPVAYMLARREFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMGVLGSYLhahgvsiafttvAVVMAQTFVAAPF 144
Cdd:COG1177   78 TVLGTPAALALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLSGGLW------------GLILAHVVFTLPF 145

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 145 YIKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAGnfmGRTQTMPLAIY 224
Cdd:COG1177  146 VVLVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAG---PGVTTLPVYIY 222

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 757130982 225 SSLQSSLD-SALTLSVILMALSFSILMTVRIAARRVEAIA 263
Cdd:COG1177  223 SMIRRGISpEINALSTLLILLSLLLLLLAERLRRRGERRR 262
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
2-258 3.41e-32

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 123.73  E-value: 3.41e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982   2 RLSAGAVGMWVVLCLVAMYFALPLLSVVLK---VSMEGFLTSLLSPVVLSSLRLSLLTSTTSLGLSMLFGTPVAYMLARR 78
Cdd:COG1178    5 PRRRPRLLLLLLALLLALLVLLPLLALLLRaftDGLANFWALLSDPYLWRALGNTLLLALLVTLLSLLLGVPLAWLLART 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  79 EFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMGVLGSYLHAH-GVSIA--FTTVAVVMAQTFVAAPFYIKSAKAGFSG 155
Cdd:COG1178   85 DFPGRRLLRWLLLLPLALPPYVVALAWIALFGPNGLLNTLLRALfGLEPPdiYGLGGIILVLVLFNYPYVYLLLRAALRS 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 156 VDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAGNFmgrtQTMPLAIYSSLQSSLD--S 233
Cdd:COG1178  165 IDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTPLVLGGGY----TTLTTAIYQAWLGDFDlgA 240

                        250       260
                 ....*....|....*....|....*
gi 757130982 234 ALTLSVILMALSFSILMTVRIAARR 258
Cdd:COG1178  241 AAALALVLLLLVLLLLLLERRLRRR 265
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
2-258 1.07e-26

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 107.94  E-value: 1.07e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982   2 RLSAGAVGMWVVLCLVAMYFALPLLSVV----LKVSMEGFLTSLLSPVVLSSLRLSLLTSTTSLGLSMLFGTPVAYMLAR 77
Cdd:COG1178  288 WLALALCLLLVLLGLLLPLLALLLWSLTkaldDNLTLDNYRFVLLDPSLLRALLNSLLLALLAALLAVLLALLLAYLVRR 367

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  78 REFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMGVLGSYlhahgvsiaFTTVAVVMAQTFVAAPFYIKSAKAGFSGVD 157
Cdd:COG1178  368 RRGRLARLLDRLAMLPYAVPGIVLGLGLLLLFNRPLPLLLY---------GTLAILVLAYVVRFLPFALRSLEAALAQID 438

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 158 RRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAGNfmgRTQTMPLAIYSSLQS-SLDSALT 236
Cdd:COG1178  439 PSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKELSATLLLRPP---GFETLAVLIYQLASSgRYGEAAA 515

                        250       260
                 ....*....|....*....|..
gi 757130982 237 LSVILMALSFSILMTVRIAARR 258
Cdd:COG1178  516 LALLLVLVSLLPVLLLERLLGR 537
PotB COG1176
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ...
 65-263 9.78e-26

ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];


Pssm-ID: 440789 [Multi-domain]  Cd Length: 287  Bit Score: 102.15  E-value: 9.78e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  65 MLFGTPVAYMLARREFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMGVLGSYLHAHGV-----SIAFTTVAVVMAQTF 139
Cdd:COG1176   84 LLLGYPIAYFLARAPPRWRNLLLLLVILPFWTSFLVRTYAWIVLLGRNGLLNSLLLALGLideplRLLYTEFAVVIGLVY 163

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 140 VAAPFYIKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAGnfmGRTQTM 219
Cdd:COG1176  164 VYLPFMVLPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAFVTPALLGG---GKVLMI 240

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 757130982 220 PLAIYSSLQSSLD--SALTLSVILMALSFSILMTVRIAARRVEAIA 263
Cdd:COG1176  241 GNLIYQQFLSALNwpLAAALAVVLLLIVLLVLLLYLRLLRRRRLLG 286
PRK10971 PRK10971
sulfate/thiosulfate ABC transporter permease CysT;
65-258 5.63e-25

sulfate/thiosulfate ABC transporter permease CysT;


Pssm-ID: 182873  Cd Length: 277  Bit Score: 100.21  E-value: 5.63e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  65 MLFGTPVAYMLARREFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMGVLGSYLHAHGVSIAFTTVAVVMAQTFVAAPF 144
Cdd:PRK10971  75 AVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGWYGEWLAKFDIKVTYTWLGIAVAMAFTSIPF 154

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 145 YIKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAGNFMGRTQTMPLAIY 224
Cdd:PRK10971 155 VVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIF 234

                        170       180       190
                 ....*....|....*....|....*....|....*
gi 757130982 225 SSLQS-SLDSALTLSVILMALSFSILMTVRIAARR 258
Cdd:PRK10971 235 VRLQEfDYPAASAIASVILAASLLLLFSINTLQSR 269
cysW PRK11602
sulfate/thiosulfate ABC transporter permease CysW;
65-223 2.81e-22

sulfate/thiosulfate ABC transporter permease CysW;


Pssm-ID: 183225  Cd Length: 283  Bit Score: 92.89  E-value: 2.81e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  65 MLFGTPVAYMLARREFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMGVLGSYLHAHGVSIAFTTVAVVMAQTFVAAPF 144
Cdd:PRK11602  81 LVFGILLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQLMFSWPGMVLVTIFVTCPF 160

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 757130982 145 YIKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAGNFMGRTQTMPLAI 223
Cdd:PRK11602 161 VVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQI 239
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 65-242 4.02e-17

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 76.82  E-value: 4.02e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  65 MLFGTPVAYMLARREFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMGVLGSylhahgVSIAFTTVAVVMAQTFVAAPF 144
Cdd:NF038017  13 ALIGIPLGALLALRRFPGRRLVISLLNTLMGLPPVVVGLIVYLLLSRSGPLGF------LGLLYTPTAMIIAQAVLALPI 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 145 YIKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPsVLTGALMTWARALGEFGATIMFAGNFMGRTQTMPLAIy 224
Cdd:NF038017  87 VAGLTLAAVQGLDPELRLQILSLGATRWQALWTLLKEARFA-LLAAVLAGFGRAISEVGAVMMVGGNIRGYTRVLTTAI- 164

                        170       180
                 ....*....|....*....|.
gi 757130982 225 sSLQSS---LDSALTLSVILM 242
Cdd:NF038017 165 -VLETSkgnFDLALALGIILL 184
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 65-244 4.39e-15

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 71.54  E-value: 4.39e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  65 MLFGTPVAYMLARREFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMGVLGSYLHahgvsiafTTVAVVMAQTFVAAPF 144
Cdd:cd06261   16 LVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPG--------LGLPALILALLLIAPF 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 145 YIKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAGNFMGRTQTMPLAIY 224
Cdd:cd06261   88 ARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGPGTGLLLIF 167

                        170       180
                 ....*....|....*....|
gi 757130982 225 SSLQSSLDSALTLSVILMAL 244
Cdd:cd06261  168 AILFPGDLGVAAAVALILLL 187
UgpA COG1175
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
65-260 2.69e-14

ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440788 [Multi-domain]  Cd Length: 298  Bit Score: 70.93  E-value: 2.69e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  65 MLFGTPVAYMLARReFVGKRVLETLLDLPLVIPPVVAGIALLMAF-GRMGVLGSYLHAHGV-SIAFTT------VAVVMA 136
Cdd:COG1175   93 LVLGLLLALLLNRK-LRGRGFFRTLFFLPWVISPVVVALIWKWLFnPDYGLLNALLGALGLePINWLGdpslalPAVIIV 171

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 137 QTFVAAPFYIKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFG-ATIMFAGNFMGR 215
Cdd:COG1175  172 TVWKGTGFNMLIFLAGLQSIPRELYEAARIDGASPWQRFRRITLPLLRPTILFVLVLSTIGALQVFDlVYVLTGGGPGNS 251

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 757130982 216 TQTMPLAIYSSLQSSLD--SALTLSVILMALSFSILMTVRIAARRVE 260
Cdd:COG1175  252 TTTLVLYIYQTAFQQFDfgYASAIAVVLFLIILVLTLLQLRLLRRRE 298
PRK15050 PRK15050
2-aminoethylphosphonate transport system permease PhnU; Provisional
 14-258 5.53e-14

2-aminoethylphosphonate transport system permease PhnU; Provisional


Pssm-ID: 237888 [Multi-domain]  Cd Length: 296  Bit Score: 70.03  E-value: 5.53e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  14 LCLVAMYFALPLLSVVLK-------VSMEGFLTSLLSPVVLSSLRLSLLTSTTSLGLSMLFGTPVAYMLARREFVGKRVL 86
Cdd:PRK15050  32 LLVLAPLVVYPLVRVVLQsltgehgLGLATYRAVLGSPDFRGALLTTLQIAFASTAGCLVLGVLLALVLAFVPFPGASLV 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  87 ETLLDLPLVIPPVVAGIALLMAFGRMGVLG------SYLHAHGVSIAFTTVAVVMAQTFVAAPFYIKSAKAGFSGVDRRL 160
Cdd:PRK15050 112 GRFIDTFVAFPSFLITLAFTFLYGSAGSVNialqrlFGLEAPPLDFLYSPGGVILAEITFYTPFVVRPLLAAFAQLDARQ 191

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 161 EQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGaTIMFAGNfmGRTQTMPLAIYSS--LQSSLDSALTLS 238
Cdd:PRK15050 192 LEAAASLGASPWRVARRVILPEAWPALAAGGSLCLLLTLNEFG-IVLFTGA--KDVVTLPVLIYSKaiVDFDYPTACAIA 268

                        250       260
                 ....*....|....*....|
gi 757130982 239 VILMALSFSILMTVRIAARR 258
Cdd:PRK15050 269 VVNLALSLGLYALYRRVNRR 288
PhnU2 TIGR03262
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ...
 72-212 3.54e-12

putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 274495 [Multi-domain]  Cd Length: 546  Bit Score: 65.86  E-value: 3.54e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982   72 AYMLARREFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMGVLGSYLHAHGVsiaFTTVAVVMAQTFVAAPFYIKSAKA 151
Cdd:TIGR03262  78 AYALTRSRIPGKGAFRLVALLPLLAPSLLPAISLIYLFGNQGLLKGLLGGFSI---YGFWGIVIGEVFYTFPHALMILVT 154

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 757130982  152 GFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAGNF 212
Cdd:TIGR03262 155 ALSLADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDFGVPKVIGGDY 215
UgpE COG0395
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ...
 65-246 1.05e-11

ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440164 [Multi-domain]  Cd Length: 282  Bit Score: 63.58  E-value: 1.05e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  65 MLFGTPVAYMLARREFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMGVLGSYLhahgvsiafttvAVVMAQTFVAAPF 144
Cdd:COG0395   91 LLLSSLAAYALARFRFRGRKLLFLLILATLMIPGQVLLIPLYLLFRQLGLLNTYW------------GLILPYLAFGLPF 158

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 145 YIKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFgatiMFAGNFMGRTQTMPLAIY 224
Cdd:COG0395  159 GIFLLRQFFRSIPRELEEAARIDGASEFRIFWRIVLPLSKPALATVAIFTFIGAWNDF----LWPLILLTSPDLRTLPVG 234

                        170       180
                 ....*....|....*....|...
gi 757130982 225 -SSLQSSLDSALTLsviLMALSF 246
Cdd:COG0395  235 lASFQGQYGTDWGL---LMAAAV 254
potC PRK09500
spermidine/putrescine ABC transporter membrane protein; Reviewed
 66-193 5.10e-10

spermidine/putrescine ABC transporter membrane protein; Reviewed


Pssm-ID: 236542 [Multi-domain]  Cd Length: 256  Bit Score: 58.46  E-value: 5.10e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  66 LFGTPVAYMLARREFVGKRVLETLLDLPLVIPPVVAGIALLMAFgrMGVlgsylhahGVSIAFTTVavVMAQTFVAAPFY 145
Cdd:PRK09500  75 LIGSLTAVALYRYRFRGKKFVSGMLFVVMMSPDIVMAISLLVLF--MLL--------GIQLGFWSL--LFAHITFCLPFV 142

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 757130982 146 IKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALM 193
Cdd:PRK09500 143 VVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLALPAVAAGWLL 190
potB PRK09497
spermidine/putrescine ABC transporter membrane protein; Reviewed
 65-211 7.87e-10

spermidine/putrescine ABC transporter membrane protein; Reviewed


Pssm-ID: 181910  Cd Length: 285  Bit Score: 58.16  E-value: 7.87e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  65 MLFGTPVAYMLARREFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMGVLGSYLHAHGV-----SIAFTTVAVVMAQTF 139
Cdd:PRK09497  80 LVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVidtpiRIMFTESAVIIGLVY 159

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 757130982 140 VAAPFYIKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEF-------GATIMFAGN 211
Cdd:PRK09497 160 ILLPFMVLPLYSSIEKLDKPLLEAARDLGANKLQTFIRIIIPLTMPGIIAGCLLVLLPAMGMFyvsdllgGAKNLLIGN 238
PstA COG0581
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 84-258 1.15e-07

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440346 [Multi-domain]  Cd Length: 259  Bit Score: 51.58  E-value: 1.15e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  84 RVLETLLDLPLVIPPVVAGIallmaFGrMGVLGSYLHAHgvsiaFTTVAVVMAQTFVAAPFYIKSAKAGFSGVDRRLEQA 163
Cdd:COG0581   79 RLIRFAIDVLAGVPSIVYGL-----FG-YALFVLTLGLG-----FSLLAGALALALLMLPVVIRTTEEALRLVPNSLREA 147

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 164 ARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEfGATIMFAG--------NFMGRTQTMPLAIYSSLQSSLDSAL 235
Cdd:COG0581  148 SYALGATKWQTIRKVVLPAALPGILTGVILAIARAAGE-TAPLLFTAgvspflplSLFDPFATLPVHIYNLASSPYPAAQ 226

                        170       180
                 ....*....|....*....|....*..
gi 757130982 236 TL----SVILMALSFSILMTVRIAARR 258
Cdd:COG0581  227 ELawaaALVLLLLVLLLNLLARLLRRR 253
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 68-259 2.22e-06

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 46.91  E-value: 2.22e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982   68 GTPVAYMLAR-REFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMgvlgsylhahgvSIAFTTVAVVMAQTFVAAPFYI 146
Cdd:pfam00528   1 GIPLGIIAALrRGRRLDRLLRPLIDLLQALPSFVLAILLVVIAILS------------ILGHGILPAIILALLGWAGYAR 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  147 KSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAGNFMGRTQTMPLAIYSS 226
Cdd:pfam00528  69 LIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGLGLLLIEAILGYD 148

                         170       180       190
                  ....*....|....*....|....*....|...
gi 757130982  227 LQSSLDSALTLSVILMALSFSILMTVRIAARRV 259
Cdd:pfam00528 149 YPEIQGPVLAAALILLLLNLLVDILQRLLDPRV 181
PRK10592 PRK10592
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
 66-257 4.21e-06

putrescine transporter subunit: membrane component of ABC superfamily; Provisional


Pssm-ID: 182574  Cd Length: 281  Bit Score: 46.77  E-value: 4.21e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  66 LFGTPVAYMLAR-REFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMGvlgsylHAHGVSIAFTTVAVVMAQTFVAAPF 144
Cdd:PRK10592  81 ILGTIAAVVMVRfGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALA------HAIGWPADRGMLTIWLAHVTFCTAY 154

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 145 YIKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAGNfmGRTqTMPLAIY 224
Cdd:PRK10592 155 VAVVISSRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFVSGP--GAT-TLPMLVF 231

                        170       180       190
                 ....*....|....*....|....*....|....*
gi 757130982 225 SSLQSSLDSALT--LSVILMALSFSILMTVRIAAR 257
Cdd:PRK10592 232 SSVRMGVNPEINalATLILGVVGIVGFIAWYLMAR 266
thiP PRK09433
thiamine transporter membrane protein; Reviewed
 66-129 7.14e-06

thiamine transporter membrane protein; Reviewed


Pssm-ID: 181853 [Multi-domain]  Cd Length: 525  Bit Score: 46.75  E-value: 7.14e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 757130982  66 LFGTPVAYMLARREFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMGVLGSYLHAHGVSIAFT 129
Cdd:PRK09433  62 LPAIPLARALYRRRFPGRGLLLRLCAMTLVLPVLVAVFGLLSVYGRSGWLAQLLQALGLEWPFS 125
PstC COG0573
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 65-260 3.94e-05

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440338 [Multi-domain]  Cd Length: 303  Bit Score: 43.93  E-value: 3.94e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  65 MLFGTPVAYMLA--------RRefvGKRVLETLLDLPLVIPPVVAGIALLMAFGrmGVLGSYLHAHGVSIAFTTVAVVMA 136
Cdd:COG0573   90 LLIAVPLGLGIAiflseyapPR---LRRILKPAIELLAGIPSVVYGFWGLFVLV--PLLRDLFPWPPSGFSLLTAGIVLA 164

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 137 qtFVAAPFYIKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGE-------FGATIMFA 209
Cdd:COG0573  165 --IMILPTITSLSRDALRAVPRSLREAALALGATRWETIRKVVLPAARSGIIAAVILGLGRALGEtmavlmvAGNAPQIP 242

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 757130982 210 GNFMGRTQTMPLAI-----YSSLQSSLDSAL-TLSVILMALSFSILMTVRIAARRVE 260
Cdd:COG0573  243 FSLFDPGRTLTALIalefgEAPFGSLHYSALfALGLVLFVITLLVNLLARLIVRRYR 299
YnjC COG4135
ABC-type uncharacterized transport system YnjBCD, permease component [General function ...
 84-191 7.00e-05

ABC-type uncharacterized transport system YnjBCD, permease component [General function prediction only];


Pssm-ID: 443310 [Multi-domain]  Cd Length: 564  Bit Score: 43.71  E-value: 7.00e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  84 RVLETLLDLPLVIPPvvagIALLmaFGrMGVLGSYLHAHGvsiafTTVAVVMAQTFVAAPFYIKSAKAGFSGVDRRLEQA 163
Cdd:COG4135  392 RRALWLLYLPLLVPQ----IAFL--FG-LQVLLLRLGLDG-----TWLAVIWAHLVFVLPYVFLSLAGPWRALDPRYAQV 459

                         90       100
                 ....*....|....*....|....*...
gi 757130982 164 ARTLGAGQVHTFFSITLPLSLPSVLTGA 191
Cdd:COG4135  460 AASLGASPWRVFWRVKLPLLLRPILTAA 487
PRK10683 PRK10683
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
 65-202 1.54e-04

putrescine transporter subunit: membrane component of ABC superfamily; Provisional


Pssm-ID: 182646  Cd Length: 317  Bit Score: 42.39  E-value: 1.54e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  65 MLFGTPVAYMLARREFVGKRVLETLLDLPLVIPPVVAGIALLMAFGRMGVLGSYLHAHGV-----SIAFTTVAVVMAQTF 139
Cdd:PRK10683 114 LLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKNNGVLNNFLLWLGVidqplTILHTNLAVYIGIVY 193

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 757130982 140 VAAPFYIKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEF 202
Cdd:PRK10683 194 AYLPFMVLPIYTALTRIDYSLVEAALDLGARPLKTFFSVIVPLTKGGIIAGSMLVFIPAVGEF 256
TauC COG0600
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion ...
 65-199 4.00e-04

ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440365 [Multi-domain]  Cd Length: 254  Bit Score: 40.90  E-value: 4.00e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  65 MLFGTPVAYMLARREFVgKRVLETLLDLPLVIPPVVAGIALLMAFGrmgvLGSylhahgVSIAFTTVAVVMAQTFVaapf 144
Cdd:COG0600   78 ALLGVPLGLLLGLSRLL-RRLLDPLLVFLRPIPPLALAPLLILWFG----IGE------ASKIFVIFLGAFFPILL---- 142

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 757130982 145 yikSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARAL 199
Cdd:COG0600  143 ---NTAAGVRSVDPELLELARSLGASRWQILRKVVLPAALPYIFTGLRIALGLAW 194
3a0107s02c TIGR00974
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ...
 65-246 4.94e-04

phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273373  Cd Length: 271  Bit Score: 40.68  E-value: 4.94e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982   65 MLFGTPVAYMLA------RREFVGKRVLETLLDLPLVIPPVVAGIallmaFGrMGVLGSYLHAHGVSIafttVAVVMAQT 138
Cdd:TIGR00974  67 IVIAVPLGIGAAiylaeyANGSRFTKIIRFAVDILAGVPSIVVGL-----FG-YGFFVLTYLGGGFSL----LAGALALA 136

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  139 FVAAPFYIKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAG-------N 211
Cdd:TIGR00974 137 LLILPVIIRTTEEALKAVPKDLREASLALGATKWQTIFKVVLPAALPGILTGIILSIARAAGETAPLLFTAGgsaftppN 216

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 757130982  212 FMGRTQTMPLAIYSSLQSSLDS---------ALTLSVILMALSF 246
Cdd:TIGR00974 217 LFDPFATLPVLIYNLASEGPYVeaqqlawaaALVLIVLVLLLNL 260
phosphate_pstC TIGR02138
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ...
 65-229 7.58e-04

phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273992 [Multi-domain]  Cd Length: 295  Bit Score: 39.94  E-value: 7.58e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982   65 MLFGTPVAYMLA--RREFVGKR---VLETLLDLPLVIPPVVAGI--------ALLMAFGRMGVLGSYLHAHGVSIAFTtV 131
Cdd:TIGR02138  76 LLIAVPVGIGIAifLSEIAPKRvrsVLKPVVELLAGIPSVVYGFwglfvlvpFLKPHFQPFLGSNLGLIPLFGGPILT-A 154

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  132 AVVMAqtFVAAPFYIKSAKAGFSGVDRRLEQAARTLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAGN 211
Cdd:TIGR02138 155 GIVLA--IMILPTIASISRDALRAVPRSYKEASYALGATKWETIRRVILPAARSGIVGAVVLGLGRALGETMAVTMVIGN 232

                         170
                  ....*....|....*...
gi 757130982  212 fmgRTQTMPLAIYSSLQS 229
Cdd:TIGR02138 233 ---VFPISPLSLFDPGTT 247
thiP PRK09433
thiamine transporter membrane protein; Reviewed
 12-261 4.29e-03

thiamine transporter membrane protein; Reviewed


Pssm-ID: 181853 [Multi-domain]  Cd Length: 525  Bit Score: 38.28  E-value: 4.29e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  12 VVLCLVAMYFALPLLSVVLKVSMEGFLTSLLSPVVLSSLRLSLLTSTTSLGLSMLFGTPVAymLARREFVGKR------V 85
Cdd:PRK09433 283 LLIVLALLLLLPPLLAVVVSGLNASLLRVLAQPALWQALWTSLRIALAAALLAVVLTMMLL--WSSRELRLRQrklaaqA 360

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982  86 LETLLDLPLVIPPVVAGIALLMAFGRMGvlGSYLHAHGVsiafttvaVVMAQTFVAAPFYIKSAKAGFSGVDRRLEQAAR 165
Cdd:PRK09433 361 LELSGMLILAMPGIVLATGLFLLLRNTT--DLPASALGI--------VILTNALMALPYALRVLEPPMRDIAARYGRLCQ 430

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 757130982 166 TLGAGQVHTFFSITLPLSLPSVLTGALMTWARALGEFGATIMFAGNfmgRTQTMPLAIYSSLQS--SLDSALTlSVILMA 243
Cdd:PRK09433 431 SLGIRGWSRLRLIELRALRRPLAQAFAFACALSLGDFGVIALFGSQ---DFRTLPFLLYQQLGSyrSQDAAVT-ALLLLL 506

                        250
                 ....*....|....*....
gi 757130982 244 LSFSILMTV-RIAARRVEA 261
Cdd:PRK09433 507 LCLLLFTLIeRLPGRHAKT 525
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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