|
Name |
Accession |
Description |
Interval |
E-value |
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-490 |
1.05e-109 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 334.54 E-value: 1.05e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 11 LINLSIAIPLIGGVLVLLTGKIPNLREAASLATAFILFTLVLEITQRIFAGEAMSTTWVELFPGIGLSFDIEPLGVVFAI 90
Cdd:PRK08375 5 LLPLLVAVPLLAAALIVLLPKRRRLRWALALLVAALTFALAISLLPQVLDGGVIAYVVGGWPPGIGIELRADSLSALFLL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 91 VASALWPVTTIYAIGYmrghNEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVTHAGTDAAKQGGRV 170
Cdd:PRK08375 85 VTSILAIAALLYAIGY----GEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRRALAAARK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 171 YLGILISTSiAFLLLAILGTWQVAGTLDFT--PGgvfANADGAPILGILLVLFCYGIGKAALMPFHRWLPAAMVAPTPVS 248
Cdd:PRK08375 161 YLIVGLIGS-TFLLIGVGLLYGVTGTLNMAdlAG---ALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPAAPPVV 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 249 ALLHAVAVVKAGVFSVLKVVIYIFGLEQLKEISLTDVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALL 328
Cdd:PRK08375 237 TALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLAL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 329 ASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSKWYLTI 408
Cdd:PRK08375 317 LTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVV 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 409 GALDADKLVIVAVLMISSLLNIAYLLPIPMKAFFNQTDSASRPwtwgEVQEAPVAILIAIGITSFSCVALFFFPQPLIEL 488
Cdd:PRK08375 397 GAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEA----PKQEAPLGMLAPSLALALLSLLLGIYAGPLLQL 472
|
..
gi 1057059437 489 VN 490
Cdd:PRK08375 473 AD 474
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
11-436 |
3.04e-103 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 315.93 E-value: 3.04e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 11 LINLSIAIPLIGGVLVLLTGKIPNLREAASLATAFILFTLVLEITQRIFAGEAMSTTWVELFPGIGLSFDIEPLGVVFAI 90
Cdd:COG0651 4 LLILPVLLPLLAAALLLLLGRRRRLQRALSLLASLALLALALALLLQVLAGGPLVYALGGWPAPFGIVLVADRLSALFLL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 91 VASALWPVTTIYAIGYMRGhnEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVTHAGTDAAKQGGRV 170
Cdd:COG0651 84 LTALVALAVLLYSIGYMRH--ERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLK 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 171 YLgILISTSIAFLLLAILGTWQVAGTLDFTPGGVFANADGAPILGILLVLFCYGIG-KAALMPFHRWLPAAM-VAPTPVS 248
Cdd:COG0651 162 YL-ILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFALLLVGFGiKAALFPLHFWLPDAYpAAPSPVS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 249 ALLHAVaVVKAGVFSVLKVVIYIFGLEQlkEISLTDVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALL 328
Cdd:COG0651 241 ALLSGL-LTKVGVYAILRVLTLLFGADP--ALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 329 ASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSKWYLTI 408
Cdd:COG0651 318 GTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQ 397
|
410 420
....*....|....*....|....*...
gi 1057059437 409 GALDADKLVIVAVLMISSLLNIAYLLPI 436
Cdd:COG0651 398 AALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-488 |
3.79e-91 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 286.71 E-value: 3.79e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 1 MFWSSFDAATLINLSIAIPLIGGVLVLLTGKIPNLREAASLATAFILFTLVLEITQRIFAGEAmSTTWVELFPGIGLSFD 80
Cdd:PRK06589 2 MILQFTTPNNLLLSTLLVGALNLTSPFATKKDSFIRNFLLITISIFFFGNILLIDLLFLKGIR-AQFELMDFGNYSIGLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 81 IEPLGVVFAIVASALWPVTTIYAIGYMRGHNEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVTHAG 160
Cdd:PRK06589 81 LEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 161 TDAAKQGGRVYLGILISTSIAFLLLAILGTWQVAGTLDFTPGGVFANADGApilgILLVLFCYGIGKAALMPFHRWLPAA 240
Cdd:PRK06589 161 NNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSI----ILLLMFIYGIAKTAIFPVHSWLPAA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 241 MVAPTPVSALLHAVAVVKAGVFSVLKVVIYIFGLEQLKEI-SLTDVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQL 319
Cdd:PRK06589 237 MVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIfAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 320 SYITVGALLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAG 399
Cdd:PRK06589 317 SLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSG 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 400 TWSKwYLTIGALDADKLVIVAVLM-----ISSLLNIAYLLPIPMKAFFNQTDSASRPwtwgeVQEAPVAILIAIgITSFS 474
Cdd:PRK06589 397 FISK-FLILLAASEQNQPWLSIIVmlvviASSILSALYLLKILSSIYKPSLSENSFI-----TKSLPYLMQISV-ITCCC 469
|
490
....*....|....
gi 1057059437 475 CVALFFFPQPLIEL 488
Cdd:PRK06589 470 ALTLFYFIQILIRE 483
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
9-489 |
3.83e-78 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 255.85 E-value: 3.83e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 9 ATLINLSIAIPLIGGVLVLLTGKIPNLREAASLATAFILFTLVLEITQ--RIFAGEA--MSTTWVELFP-GIGLSFDIEP 83
Cdd:COG1009 1 LQLLWLIPLLPLLGALLAGLLGRRLGRRAAGWLAALAPLAAFVLSLLLfpAVLGGEVvvELYTWIPVGSlGLDFGFRLDG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 84 LGVVFAIVASALWPVTTIYAIGYMRGHneENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVTH----- 158
Cdd:COG1009 81 LSLLMLLLVTGVGLLVHIYSIGYMSGD--PGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFwyekp 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 159 AGTDAAKQGgrvylgiLISTSIA--FLLLAILGTWQVAGTLDFTpgGVFANADGAP----ILGILLVLFCYGIGKAALMP 232
Cdd:COG1009 159 SARRAARKA-------FLVTRVGdlGLLLGILLLGAIAGTLNFS--ELLAAAPTILssplLTLILLLLLLGAFGKSAQFP 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 233 FHRWLPAAMVAPTPVSALLHAVAVVKAGVFsvlkVVIYIFGLEQLKEISLTdVMLYIAATTVLLSSCIAMTKDNLKARLA 312
Cdd:COG1009 230 LHFWLPDAMEGPTPVSALLHAATMVKAGVY----LLARLSPLFALSPVWLT-VVAIIGAITALFAALIALAQTDIKRVLA 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 313 YSTVSQLSYITVGALLAspiAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISII 392
Cdd:COG1009 305 YSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLA 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 393 GLPPMAGTWSKWYLTIGALDADKL--VIVAVLMISSLLNIAYLLPIPMKAFFNQtdsaSRPWTWGEVQEAPVAILIAIGI 470
Cdd:COG1009 382 GIPPFAGFFSKEAILEAALEAGGLgpLLLAVALLGAFLTAFYSFRLFFLVFFGK----PRPKTPKHPHESPWLMTLPLVV 457
|
490 500
....*....|....*....|
gi 1057059437 471 TSFSCVAL-FFFPQPLIELV 489
Cdd:COG1009 458 LAVLSLVLgLLLPGLLEGLL 477
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
18-470 |
5.89e-67 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 222.90 E-value: 5.89e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 18 IPLIGGVLVLLTGKIPNLREAASLATAFILFTLVLeitqrifageAMSTTWVELFPGIGLSFDIEPLGVVFAIVASALWP 97
Cdd:PRK07234 12 PFLLGFAIYLLPKLDRNLALGMAIVSAVYALGLVA----------SMVPLELTLLDNFGVTLRADALSGYFILTNALVTL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 98 VTTIYAIgymrghnEENQTRFFFCFALAISSVMAICF-SGNLLTLFVFYEVLTLSTYPLVTHAGTDAAKQGGRVYLgILI 176
Cdd:PRK07234 82 AVIFYCW-------ESAKTRFFYAQLLILHGSVNAAFvCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYL-FYS 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 177 STSIAFLLLAILGTWQVAGTLDFTPggvFANADGAPILGILLVLfcygIGKAALMPFHRWLPAAMVAPTPVSALLHAVAV 256
Cdd:PRK07234 154 NVAMLFYLIGAVLVYQANGTFAFSG---LATADPEAFALIALGL----LVKGGIFVSGLWLPLTHSEAEPPVSALLSGVV 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 257 VKAGVFSVLKVVIYIFGLEQlkeisltdVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYItvgalLASPIaaAG 336
Cdd:PRK07234 227 VKAGVFPLVRCALDVPGLDL--------IVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFI-----LAAPL--VG 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 337 ATMHIAtHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFaigaiSIIGLPPMAGTWSKWYLTIGALDadkl 416
Cdd:PRK07234 292 GLYALA-HGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIPLTMASF-----SIAGFPLLAGFVSKVLTLKNLLP---- 361
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 1057059437 417 VIVAVLMISSLLNIAYLLPIPMKAFFNQT-DSASRPWTWGEVQEAPVAILIAIGI 470
Cdd:PRK07234 362 WQAIALNLAAVGTAASFWKFIFLPFSADDeDKKPLPGFWNAIALLLGGLFLANGV 416
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
10-403 |
5.80e-51 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 183.44 E-value: 5.80e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 10 TLINLSIAIPLIGGVLVLLTGKIPNLREAASLATAFI----LFTLVLEITQRIFAGEAMST---TWVE---LFPGIGLSF 79
Cdd:PRK06590 3 NLLWLIVLLPLIGALILGLFGRRIGEKWAHLVGTGLVglsaLLSLVVFFDFLLGGGRAFSQtlwTWISvgdFDVDFGLRV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 80 DiePLGVVFAIVasalwpVTT------IYAIGYMRGhnEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTY 153
Cdd:PRK06590 83 D--GLSATMLVV------VTGvsflvhIYSIGYMAH--DEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSY 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 154 PLV-----THAGTDAAKQGgrvylgiLISTSIA--FLLLAILGTWQVAGTLDFtpGGVFANADGAPILG------ILLVL 220
Cdd:PRK06590 153 LLIgfwykKPSAGAAAMKA-------FIVNRVGdvGLALGIFLLFAEFGSLNY--DEVFAAAPQFFGLGwsaltlICLLL 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 221 FCYGIGKAALMPFHRWLPAAMVAPTPVSALLHAVAVVKAGVFsvlkVVIYIFGLEQLKEISLTDVMlYIAATTVLLSSCI 300
Cdd:PRK06590 224 FIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVY----LVARMSPLFELSPEALLFVA-IVGAVTALFAAFI 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 301 AMTKDNLKARLAYSTVSQLSYITVGallASPIAAAGATMHIATHAVGKITLFFCAGAIMVA-SHKKNISDMVGLGRKMPL 379
Cdd:PRK06590 299 GLVQTDIKRVLAYSTMSQLGYMFLA---LGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAmHHEQDIRKMGGLRKKMPV 375
|
410 420
....*....|....*....|....
gi 1057059437 380 TMGAFAIGAISIIGLPPMAGTWSK 403
Cdd:PRK06590 376 TYATFLIGTLALIGIPPFAGFFSK 399
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
10-403 |
1.02e-47 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 174.39 E-value: 1.02e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 10 TLINLSIAIPLIGGVLVLLTGKIPNLREAASLATAFILFTLVLE--ITQRIFAGEAMSTTWVELFPGI-------GLSFD 80
Cdd:TIGR01974 1 NLIFLIVFLPLIGFLIAGLFGRRIGERVSGIIGIGSVGLSAALSafVFVDFFLNGEGEAFTQSLFPWIsvggfqvDFGLR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 81 IEPLGVVFAIVASALWPVTTIYAIGYMRGhnEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLV---- 156
Cdd:TIGR01974 81 LDGLSLTMLVVVTGVGSLVHIYSIGYMAH--DEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIgfwy 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 157 --THAGTDAAKQggrvylgiLISTSIA--FLLLAILGTWQVAGTLDFTP-GGVFANADGAPILGILLVLFCYGIGKAALM 231
Cdd:TIGR01974 159 kkPSANNAAIKA--------FVVNRVGdfGLLLGIFLIFWYFGTLNFQEvFALAPGAFFSALTLICLLLFIGAMGKSAQL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 232 PFHRWLPAAMVAPTPVSALLHAVAVVKAGVFsvlkVVIYIFGLEQLKEISLTDVMLyIAATTVLLSSCIAMTKDNLKARL 311
Cdd:TIGR01974 231 PLHTWLPDAMEGPTPVSALIHAATMVTAGVY----LVARTSPLFELSPTALYLVTI-IGAITALFAATVALVQNDIKRIL 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 312 AYSTVSQLSYITVGALLAspiAAAGATMHIATHAVGKITLFFCAGAIMVA-SHKKNISDMVGLGRKMPLTMGAFAIGAIS 390
Cdd:TIGR01974 306 AYSTMSQLGYMFLALGVG---AYAAAIFHLMTHAFFKALLFLGAGSVIHAmHHEQDIRKMGGLRKKMPVTYITFLIGSLA 382
|
410
....*....|...
gi 1057059437 391 IIGLPPMAGTWSK 403
Cdd:TIGR01974 383 LIGFPGFAGFFSK 395
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
14-410 |
4.95e-46 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 167.07 E-value: 4.95e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 14 LSIAIPLIGGvlvLLTGKIPNLREAASLATAFILFTLVLEITQRIFAGEAMSTTWVELFP---GIGLSFDIEPLGVVFAI 90
Cdd:PRK06525 6 LTLLLPFIGA---LVVFFLPGRRAAELGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNlgdVALFGLVIDPVSVLIGF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 91 VASALWPVTTIYAIGYM----RGH-NEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVTHAGTDAAK 165
Cdd:PRK06525 83 VVVLLGLLVTLYSTGYMspgnREHpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKAL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 166 QGGrvyLGILISTSIAFLLLAILGTWQVAGTLDFTPGGVFANADGAPILGILLVLFCyGIGKAALMPFHRWLPAAMVAPT 245
Cdd:PRK06525 163 RSA---LKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKYLVFLGILFA-AWGKSAQLPFYSWLPDAMEAPT 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 246 PVSALLHAVAVVKAGVFSVLKVVIYIFGLEQlkEISLtdVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVG 325
Cdd:PRK06525 239 PASAYLHAASMVKVGVYIFARAIQSMGPIPH--VIGY--VGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 326 ---ALLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWS 402
Cdd:PRK06525 315 lslAILGSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFS 394
|
....*...
gi 1057059437 403 KWYLTIGA 410
Cdd:PRK06525 395 KFPIFAAG 402
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
73-492 |
2.71e-42 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 157.83 E-value: 2.71e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 73 PGIGLSFDIEPLGVVFAIVASALWPVTTIYAIGYMRgHNEENQTrFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLST 152
Cdd:PRK12667 72 APIGIVYEVDLLGALLGLLTALVMFLILIYSYWYLE-HESGPEW-YYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISA 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 153 YPLVTHAGTDAAKQGGRVYLGIL--ISTSIAFLLLAIL----GTWQVA------GTLDFTPGGVFANADGAPILGILLVL 220
Cdd:PRK12667 150 YGLVAYYRDRGDAVEAAIKYALIgaVGTTLYFLALAFLyatfGTLNMAdlsakiRGLSFPLTGGLAGNPPLALGVALALA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 221 FCYGIGKAALMPFHRWLPAAM-VAPTPVSALLHAVaVVKAGVFSVLKVVIYIFGLEQL---KEISLTDVMLYIAATTVLL 296
Cdd:PRK12667 230 LWAFTIKAAIFPNHFWLPDAHpAAPSPVSAMLSGL-VVNVGAYAIIRFLYTIFGISPSlidFRAALSPILIILGAVSAII 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 297 SSCIAMTKDNLKARLAYSTVSQLSYITVGALLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRK 376
Cdd:PRK12667 309 GALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRK 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 377 MPLTMGAFAIGAISIIGLPPMAGTWSKWYLTIGALDADKLVIVAVLMISSLLNIAYLLPIPMKAFFNQTDSaSRPWTWGE 456
Cdd:PRK12667 389 MPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYSLFFGKPKS-GEEVEHKE 467
|
410 420 430
....*....|....*....|....*....|....*.
gi 1057059437 457 VQEAPVAILIAIGITSFSCVALFFFPQPLIELVNLI 492
Cdd:PRK12667 468 SPSMSVVILVLALAVLILGILALFLPEILDSLIEPA 503
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
11-490 |
6.18e-41 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 152.96 E-value: 6.18e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 11 LINLSIAIP---LIGGVLVLLTGKIPNLREAASLATAFILFTLVLEItqrIFAGEAMSTTWVELFPGiglSFDIEPLGVV 87
Cdd:COG1007 1 SLDLLALLPeiiLLLGALVLLLLDLFLPRRSRRLLAGLALLGLLLAL---ALLLLALGGGTGTAFGG---MFVVDGFALF 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 88 FAIVASALWPVTTIYAIGYMRGHNEeNQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVTHAGTDA-AKQ 166
Cdd:COG1007 75 FKLLILLAALLVLLLSRDYLERRGL-LRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRrSSE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 167 GGRVYLgILISTSIAFLLLAILGTWQVAGTLDFTPGGVFANADGA--PILGILLVLFCYGIG-KAALMPFHRWLPAAMV- 242
Cdd:COG1007 154 AALKYF-LLGALSSGFLLYGISLLYGATGSLNLAGIAAALAAGGAnsPLLLLGLVLVLAGLAfKLSAVPFHMWTPDVYEg 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 243 APTPVSALLhAVAVVKAGVFSVLKVVIYIFGLEQlkeISLTDVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYI 322
Cdd:COG1007 233 APTPVTAFL-ATAPKIAAFAALLRLLVEAFPGLA---ADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYL 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 323 TVGALLASPIAAAGATMHIATHAVGKITLFfcaGAIMVASHKK----NISDMVGLGRKMPLTMGAFAIGAISIIGLPPMA 398
Cdd:COG1007 309 LLGLAAGTPLGVSAALFYLLAYLFMNLGAF---AVILLLSRKGgeaeEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTA 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 399 GTWSKWYLTIGALDADKLVIVAVLMISSLLNIAYLLPIPMKAFFNQTDSASRPwtwgevqEAPVAILIAIGITSFSCVAL 478
Cdd:COG1007 386 GFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVKAMYFDEPEEEAPI-------SAPPGLRVALVIAALLVLLL 458
|
490
....*....|..
gi 1057059437 479 FFFPQPLIELVN 490
Cdd:COG1007 459 GIFPGPLLDLAA 470
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
10-492 |
9.01e-41 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 154.77 E-value: 9.01e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 10 TLINLSIAIPLIGGVLVLLTGKIpnlREAASLATAFILFTLVLEITQRIFAGEamSTTWVELFPGIGLSFDIEPLGVVFA 89
Cdd:PRK08668 1 MELTLLLLTPLIGSVLAYLLKKI---NEKIGVIGNALPLLFLIKLYFTLKVGT--GEKLTLFFGGFKLTFTLTHLSWFFA 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 90 IVASalwpVTTIYAIGYMRGHNEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVThAGTDAAKQGGR 169
Cdd:PRK08668 76 MISL----LVIFSVAFFMVSEKTKNDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 170 VYLGILISTSIAFLLlAILGTWQVAGTLDFTPGGVFANAD--GAPILGILLVLFCYGIGKAALMPFHRWLPAAM-VAPTP 246
Cdd:PRK08668 151 KYFVLSAIGAYAMLY-AIFLIYAKTGTFDFADISQGLINDtsTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYsEAPQS 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 247 VSALLHAVaVVKAGVFsVLKVVIYIFG----LEQLKEISLTDVMLYIAAT----TVLLSSCIAMTKDNLKARLAYSTVSQ 318
Cdd:PRK08668 230 FSAVLSGQ-LSKLGAY-GFLLVLYVLPgtklFSEFGTYRGVPLFNYILAWlgniSIIVGTLMAILQEDIKKLIAYSSVAN 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 319 LSYITVGALLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMA 398
Cdd:PRK08668 308 GGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMS 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 399 GTWSKWyLTIGALDADKLVIVAVLM-ISSLLNIAYLLPIPMKAFFNQtdsasRPWTWGEVQEAPVAILIAIGITSFSCVA 477
Cdd:PRK08668 388 GFASKW-LIFEALISKGMPITAFMAfFGSIGSFLYVFRPLAGVFLGQ-----LPSDHKDVKEAPLPMLIPMAILVLLNVV 461
|
490
....*....|....*
gi 1057059437 478 LFFFPQPLIELVNLI 492
Cdd:PRK08668 462 FGVAPGLVLQEINKI 476
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
5-406 |
1.06e-40 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 155.43 E-value: 1.06e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 5 SFDAATLINLSIAIPLIGGVLVLLTGKIPNL--REAASLATAFILFTLVLEITQrIFAGEAMSTTWVELFPGIGLSFDIE 82
Cdd:PRK06521 1 QMLALQLLLLSLLLYLALGLAGLLLLRRPRLaiRLSGPTGLLGGLLGLASGLTA-LFAGPTLAAVLPLGLPFLPFHLRLD 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 83 PLGVVFAIVASALWPVTTIYAIGYMRGHNEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVTHAGTD 162
Cdd:PRK06521 80 ALSAFFLLVISLLGAAASLYSLGYFREYEGKGPGAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHRE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 163 AA-KQGGRVYLGILISTSIAfLLLAILGTWQVAGTLDFTpggVFANADGAPILG---ILLVLFCYGiGKAALMPFHRWLP 238
Cdd:PRK06521 160 AEiRRAGFLYLLMAHAGALA-ILLAFGLLARESGSYDFA---AMRAAHLSPFWAslvFLLALFGFG-AKAGLVPLHVWLP 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 239 AAM-VAPTPVSALLHAVaVVKAGVFSVLKVVIYIFGLEQLkeiSLTDVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVS 317
Cdd:PRK06521 235 RAHpAAPSHVSALMSGV-MLKVAIYGILRVVFDLLGAPGW---WWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIE 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 318 QLSYITVGALLA-------SPIAAA----GATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAI 386
Cdd:PRK06521 311 NIGIIFVGLGLAmvfiaygMPLLAAlaltAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLI 390
|
410 420
....*....|....*....|
gi 1057059437 387 GAISIIGLPPMAGTWSKWYL 406
Cdd:PRK06521 391 GCLAISALPPLNGFVSEWLL 410
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
79-403 |
1.08e-40 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 155.18 E-value: 1.08e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 79 FDIEPLGVVFAIVASALWPVTTIYAIGYMRghNEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLV-- 156
Cdd:PRK07376 87 YVIDPLGAVMLVLVTTVALLVMIYSDGYMA--HDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVgf 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 157 ---THAGTDAAKQggrvylgilistsiAF---------LLLAILGTWQVAGTLDFT---PGGVFANADGApILGILLVLF 221
Cdd:PRK07376 165 wydRKGAADAAQK--------------AFvvnrvgdfgLLLGILGLFWATGSFDFDgiaDRLSELVSSGA-VSGWLALLL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 222 CY-----GIGKAALMPFHRWLPAAMVAPTPVSALLHAVAVVKAGVFSVLKvviyifgLEQLKEIsLTDVMLYIA---ATT 293
Cdd:PRK07376 230 CIlvflgPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVAR-------MYPVFEQ-FPAVMTVIAwtgAIT 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 294 VLLSSCIAMTKDNLKARLAYSTVSQLSYItvgaLLASPIAAAGATM-HIATHAVGKITLFFCAGAIM-----VASHKKNI 367
Cdd:PRK07376 302 AFLGASIALTQNDIKKGLAYSTISQLGYM----VMAMGCGAYSAGLfHLMTHAYFKAMLFLGSGSVIhgmeeVVGHDPVL 377
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1057059437 368 SD----MVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSK 403
Cdd:PRK07376 378 AQdmrlMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSK 417
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
11-490 |
2.52e-40 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 151.77 E-value: 2.52e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 11 LINLSIAIPLIGGVLVLLTGKiPNLREAASLATAFILFTLVLEI---TQRIFAGEAM----STTWVELFpGIGLSFDIEP 83
Cdd:COG1008 5 LLSLLILLPLLGALLLLLLPR-RNARLARWVALAVSLLTLLLSLyllAGFDPGTGGFqfveSYPWIPSL-GISYHLGVDG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 84 LGVVFAIVASALWPVTTIYAIgymrgHNEENQTRFFFCFALAISSVMAICF-SGNLLTLFVFYEVLTLSTYPLVthagtd 162
Cdd:COG1008 83 ISLPLVLLTALLTPLAILASW-----NEIKKRPKLYYALLLLLEAGMIGVFlALDLFLFYVFWELMLIPMYFLI------ 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 163 aAKQGG--RVYLGI--LISTSI--AFLLLAILGTWQVAGTLDFTPGGVFANADGAPILGILLVLFCYGIG-KAALMPFHR 235
Cdd:COG1008 152 -GIWGGerRIYAAIkfFLYTLAgsLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQLLLFLAFFIAFAvKVPMFPFHT 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 236 WLPAAMV-APTPVSALLHAVaVVKAGVFSVLKVVIYIFgLEQLKEisLTDVMLYIAATTVLLSSCIAMTKDNLKARLAYS 314
Cdd:COG1008 231 WLPDAHVeAPTAGSVLLAGV-LLKMGGYGLLRFALPLF-PEASAY--FAPLLAALGVIGIIYGALVALAQTDLKRLIAYS 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 315 TVSQLSYITVGALLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGL 394
Cdd:COG1008 307 SVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGL 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 395 PPMAGTWSKWYLTIGALDADKlVIVAVLMISSLLNIAYLLPIPMKAFFNQTDSASRPW---TWGEVqeAPVAILIAIgit 471
Cdd:COG1008 387 PGTSGFVGEFLVLLGAFQVNP-WLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELpdlNPREL--AVLAPLAAL--- 460
|
490
....*....|....*....
gi 1057059437 472 sfsCVALFFFPQPLIELVN 490
Cdd:COG1008 461 ---ILLLGLYPQPLLDLIE 476
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-466 |
3.02e-40 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 154.69 E-value: 3.02e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 47 LFTLVLEITQRIFAGEA--MSTTWVELFpGIGLSFDIEPLGVVFAIVASALWPVTTIYAIGYMRGHneENQTRFFFCFAL 124
Cdd:PRK12647 27 LFLYFLSFIPEIAAGETvrGGYAWVPSL-GVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGH--PDLGRFYSYILL 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 125 AISSVMAICFSGNLLTLFVFYEVLTLSTYPLVTHAGTDAAKQggRVYLGILISTSIA--FLLLAILGTWQVAGTLDFTpg 202
Cdd:PRK12647 104 FMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAAR--RAALQALLVTGGGglALLAGLILLGNVTGTYSLS-- 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 203 GVFANAD---GAPI-LGILLVLFCYGIGKAALMPFHRWLPAAMVAPTPVSALLHAVAVVKAGVFsVLKVVIYIFGLEQLK 278
Cdd:PRK12647 180 ELLASGDvirEHPLyLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIY-LLARLNPVLGGTPLW 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 279 EISLTdvmlYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALLASPIAAAGATMHIATHAVGKITLFFCAGAI 358
Cdd:PRK12647 259 QTILP----LFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGII 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 359 MVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSKWYLTIGALDADKLVIV--AVLMISSLLNIAYLLPI 436
Cdd:PRK12647 335 DHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLIltVAAVLGNALMVAVAFLV 414
|
410 420 430
....*....|....*....|....*....|
gi 1057059437 437 PMKAFFNQtdsasRPWTWGEVQEAPVAILI 466
Cdd:PRK12647 415 GIKPFLGK-----LVETPKHPHEAPVLMWL 439
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
74-485 |
3.95e-40 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 155.08 E-value: 3.95e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 74 GIGLSFDIEPLGVVFAIVASALWPVTTIYAIGYMRgHNEENQTRF---FFCFALAIssvMAICFSGNLLTLFVFYEVLTL 150
Cdd:PRK12644 65 GLDLAFRLDALAALMSLLVLGVGALVLLYCARYFD-DDEPRLGRFaaeLVAFAGAM---FGLVTSDNLLLLYVFWELTTV 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 151 STYPLVTHAGTDAAKQggRVYLGILISTS---IAFLL-LAILGtwQVAGTLDFTpgGVFANADGAPILGILLVLFCYG-I 225
Cdd:PRK12644 141 LSFLLIGHYAERAASR--RAALQALLVTTaggLAMLVgIIILG--QAAGTYRLS--ELLADPPTGPAVSVAVVLILVGaL 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 226 GKAALMPFHRWLPAAMVAPTPVSALLHAVAVVKAGVF------------SVLKVVIYIFGLeqlkeisltdvmlyiaaTT 293
Cdd:PRK12644 215 SKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYlvarlapgfadvPVWRPTVLVLGL-----------------AT 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 294 VLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALLASPIAA-AGATMHIAtHAVGKITLFFCAGAIMVASHKKNISDMVG 372
Cdd:PRK12644 278 MLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAAlAGLAMLLA-HALFKAALFLVVGIIDHSTGTRDIRKLSG 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 373 LGRKMPLTMGAFAIGAISIIGLPPMAGTWSK-----WYLTIGALDADKLVIVAVLMISSLLNIAYLLPIPMKAFFNQTDS 447
Cdd:PRK12644 357 LGRRQPVLAVVAALAAASMAGLPPLLGFVAKeaaleAVLHDGALGPAGPVVLAGIVLGSILTVAYSLRFLWGAFARKPGA 436
|
410 420 430
....*....|....*....|....*....|....*...
gi 1057059437 448 ASRPWTwGEVQEAPVAILIAIGITSFSCVALFFFPQPL 485
Cdd:PRK12644 437 FPSVAV-TEMHRPSPLFLAPPAVLAVLGLVLGLLPAPL 473
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
16-487 |
1.28e-38 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 150.34 E-value: 1.28e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 16 IAIPLIGGVLVLLTgkIPNLREAASLATAFI-LFTLVLEITQR--IFAGEAMSTTWvELFPGIGLSFD--IEPLGVVFAI 90
Cdd:PRK12648 7 VLLPFLGALLAALL--PRNARNAEAWLAGLVaLAALVLLALLYpaVAAGEVIRAEI-EWLPALGLNLSlrLDGLAWLFAL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 91 VASALWPVTTIYAIGYMRGhnEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVTHAG-TDAAKQGGR 169
Cdd:PRK12648 84 LILGIGLLVVLYARYYLSP--ADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHhRADARRGAR 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 170 VYLGIlisTSIA-FLLLA---ILGtwQVAGTLDFTPggVFANAD---GAPILGILLVLFCYGI-GKAALMPFHRWLPAAM 241
Cdd:PRK12648 162 MALTV---TGAGgLALLAgvlLLG--HIVGSYDLDV--VLAAGDlirAHPLYPPALVLILLGAfTKSAQFPFHFWLPHAM 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 242 VAPTPVSALLHAVAVVKAGVF------SVLkvviyifgleqlkeiSLTDVMLYIAAT----TVLLSSCIAMTKDNLKARL 311
Cdd:PRK12648 235 AAPTPVSAYLHSATMVKAGVFllarlwPVL---------------AGTEEWFWIVGGagliTLLLGAYFALFQHDLKGLL 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 312 AYSTVSQLSYITVGALLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISI 391
Cdd:PRK12648 300 AYSTISHLGLITLLLGLGSPLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGLRRLMPITATLAMVAAAAM 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 392 IGLPPMAGTWSKWY-----LTIGALDADKLVIVAVLMISSLLNIAYLLPIPMKAFFN--QTDSASRP-----WTWgevqe 459
Cdd:PRK12648 380 AGVPLLNGFLSKEMffaetLDTHLLGSLDWLLPVAATLAGAFSVAYSLRFIHDVFFGppPDDLPKTPhepprWMR----- 454
|
490 500
....*....|....*....|....*...
gi 1057059437 460 APVAILIAIgitsfsCVALFFFPQPLIE 487
Cdd:PRK12648 455 APVELLVLL------CLLVGIFPALTVG 476
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
14-482 |
3.18e-37 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 146.34 E-value: 3.18e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 14 LSIAIPLIGGVLVLLTGKIPNLREAASLATAFI-LFTLVLEITQRIFAGEAM--STTWVELFPGIG----LSFDIEPLGV 86
Cdd:PRK12650 3 AVLALAALAVVLAPPLVRVLDRKAGWPLAAIFVaAAGLLLKELPPILDGDALtwSVTWIPDLLGNGvdvnLALRADALSL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 87 VFAIVASALWPVTTIYAIGYMrgHNEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVTHAGTDAAKQ 166
Cdd:PRK12650 83 FFALLALVIGAVVFIYSARYL--PRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIARSGSGGEAG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 167 GGRVYL-----GILISTSIAfLLLAILGTWQVAGTLDftpGGVFANADGapILGILLVLFCY-GIGKAALMPFHRWLPAA 240
Cdd:PRK12650 161 SIRTLIltffgGLTLLAAVA-IAATQTGTTSLSGILH---SDVWAEKPG--LTTVVAVLIAVaAFTKSAQFPFHFWLPEA 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 241 MVAPTPVSALLHAVAVVKAGVFSVLKVVIYIFGleqlkeISLTDVMLYIAA-TTVLLSSCIAMTKDNLKARLAYSTVSQL 319
Cdd:PRK12650 235 MAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHD------VAVWNWLLIIVGmITALMGAVFAVQKTDLKKLTAYSTVSQL 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 320 SYITVGALLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAG 399
Cdd:PRK12650 309 GWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFG 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 400 TWSKWYLTIGALDAD-----KLVIVAVLMISSLLNIAYLLPIPMKAFFNQTDSASrpwtwgEVQEAPVAILIAIGITSFS 474
Cdd:PRK12650 389 FVSKEGMLTAFLEAPggnagVVLLLVGAALGAVFTFAYSARLVLGAFVDGPRDMS------HVKEAPVSLWLPAALPGAL 462
|
....*...
gi 1057059437 475 CVALFFFP 482
Cdd:PRK12650 463 SLPLGLVP 470
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-483 |
9.42e-37 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 142.16 E-value: 9.42e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 10 TLINLSIAIPLIGGVLVLLTGKI-PNLREAASLATAFILFTLVLEITQRIFAGEAM------STTWVELFPG-----IGL 77
Cdd:PRK08376 5 HLPPLLIIIPLFGAFSMPIVSLLgGKAREIWAVLISFLTLIVALLVFYEVWNNGTIvyvlgaESPTLTLPFGsggfpIRI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 78 SFDIEPLGVVFAIVASALWPVTTIYAIGYMRghNEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVT 157
Cdd:PRK08376 85 IWEVDLFGAFMALIATIVSFLAVLYSISYMK--HDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 158 -HAGTDAAKQGGRVYLgILISTSIAFLLLAILGTWQVAGTLDFTPGGVFANADGAPILGILLVLFCYGIG-KAALMPFHR 235
Cdd:PRK08376 163 fRNDTWEAIEAGIKYM-FVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVAKIALALFIAGLAmKSGAVPVHM 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 236 WLPAAM-VAPTPVSALLhaVAVVKAGVFSVLKVVIYIFGLeQLKEISLTDVMLYIAATTVLLSSCIAMTKDNLKARLAYS 314
Cdd:PRK08376 242 WLPDAYpAAPSSISAML--LVIKQAGLYALARVLFSIYGP-AINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYH 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 315 TVSQLSYITVG-----ALLASP-------IAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMG 382
Cdd:PRK08376 319 SVSQIGYMLLGlgvglAALGDPamasygeIALAGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTI 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 383 AFAIGAISIIGLPPMAGTWSKW--YLTIGALDAdklVIVAVLMISSLLNIAYLLPIPMKAFFNQTDSasrpwTWGEVQEA 460
Cdd:PRK08376 399 AFLIGAAAIVGLPPFNGFASKWliYESSALFNP---ILGVIAMIGSVLTLASFVKVFHTAFFGPPSE-----KVMNVKEP 470
|
490 500
....*....|....*....|...
gi 1057059437 461 PVAILIAIGITSFSCVALFFFPQ 483
Cdd:PRK08376 471 PKPMLVPMLILAIAIIGMGLFPW 493
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
135-426 |
6.37e-36 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 135.13 E-value: 6.37e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 135 SGNLLTLFVFYEVLTLSTYPLVTHAGTDAAKQGGRVYLGILISTSIAFLLLAILGTWQVAGTLDFTP--GGVFANADGAP 212
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDElsKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 213 ILGILLVLFCYGIGKAALMPFHRWLPAAMV-APTPVSALLHAVAVvKAGVFSVLKVviyiFGLEQLKEISLTDVMLYIAA 291
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEgAPTPVSALLAATLV-KAGGYGLIRR----SLLYLPSSPFIQQILLILAI 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 292 TTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHK-KNISDM 370
Cdd:pfam00361 156 ISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHtRNIRDY 235
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1057059437 371 VGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSKWYLTIGALDADKLVIVAVLMISS 426
Cdd:pfam00361 236 GGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
41-486 |
6.54e-35 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 139.21 E-value: 6.54e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 41 LATAFILFTLVLEITQRIFAGEAMSTT--WVelfPGIGLSFDI--EPLGVVFAIVASALWPVTTIYAIGYMRghNEENQT 116
Cdd:TIGR00940 32 LAIPLVCFLYTLGLYPYTASGGVLHYTidWV---PELGLNFTLymDGLALLFSLLITGIGVLVVLYSIYYLS--KEEPLP 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 117 RFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVTH-AGTDAAKQGGRVYLGILISTSIAfLLLAILGTWQVAG 195
Cdd:TIGR00940 107 NFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYwHHRAHSRYGAQKSLTITVFGGLA-MLGGLILLGKITG 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 196 TldFTPGGVFANAD---GAPILGILLVLFCYG-IGKAALMPFHRWLPAAMVAPTPVSALLHAVAVVKAGVFSVLKVVIyI 271
Cdd:TIGR00940 186 S--FSIDAVIASADairNSPLFGTAMVLVLLGaFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTP-V 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 272 FGLEQLKEISLTDVMLyiaaTTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALLASP-------------IAAAGAT 338
Cdd:TIGR00940 263 FAGTEAWFWIVGLAGL----ITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSPsyhyqgddskiyaLAAVAAV 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 339 MHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSKWYLTIGALDADKLVI 418
Cdd:TIGR00940 339 FHLINHATFKGSLFMAAGIIDHETGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAITAHLVNP 418
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1057059437 419 VAVL----------MISSLLNIAYLLPIPMKAFFNQTDSASRPwtwGEVQEAPVAILIAIGITSFSCVALFFFPQPLI 486
Cdd:TIGR00940 419 FDTVtlgylfpyvaTVASVFTFVYSLRFIHGVFFGRPKPEDLP---RKPHEPPRWMLASPDILVLLVLVFGLFPAQLT 493
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
73-470 |
7.69e-35 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 136.43 E-value: 7.69e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 73 PGIGLSFDIEPLGVVFAIVASALWPVTTIYAigyMRGHNEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLST 152
Cdd:PRK08377 68 PPVGINLYIGPFAALFVLIIAIVSFIMSIFS---LKAVEVEPIDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITA 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 153 YPLVTHAGTDAAKQGGRVYLgILISTSIAFLLLAILGTWQVAGTLDFTPGGVFANADGAPILGILLVLFCYGIG-KAALM 231
Cdd:PRK08377 145 YALTAYNKTGEAAEASMKYI-VLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGTIDPTVAQVGLALLIFGLAvEAELF 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 232 PFHRWLPAA-MVAPTPVSALLHAVaVVKAGVFSVLKVVIYIFGLEQLKeiSLTDVMLYIAATTVLLSSCIAMTKDNLKAR 310
Cdd:PRK08377 224 PLNAWAPDAyQAAPHPITVMFSAF-VVKAGLYAMARILYLMQNANGWS--SVLKLVIIMATLTVFFAELSALRQKNVKRM 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 311 LAYSTVSQLSYITVGALLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAIS 390
Cdd:PRK08377 301 IAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALS 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 391 IIGLPPMAGTWSKWYLTIGALDADKLVIVAVLMISSLLNIAYLLPIPMKAFFNQTDSASRP-WTWGEVQEAPVAILIAIG 469
Cdd:PRK08377 381 TVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRLIHTMWFKGEGERIREnAAIGIILLLLAALIVVIG 460
|
.
gi 1057059437 470 I 470
Cdd:PRK08377 461 I 461
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
20-488 |
1.11e-34 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 137.55 E-value: 1.11e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 20 LIGGVLVLLTGKIP------NLREAASLATAFILFTLVLEI-TQRIFAGEAMSTTWVELFPGIGLSFDIEPLGVVFAIVA 92
Cdd:PRK08667 7 LGAILLLLAAAVIPlvfrhkRKRVWQSVLWLVIAIALLLFAgSLQLFTGNPLDIPLWGIAPGLDITFHIDRLAAFFIILI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 93 SALWPVTTIYAIGYM-RGHNEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVTHAGTDAAKQGGRVY 171
Cdd:PRK08667 87 GLVSLCVAIYSLGYNeHMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIF 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 172 LGILISTSIAFLLLAILGTWQVAGTLDFTPGGVfanADGAPILGILLVLFCYGIgKAALMPFHRWLPAAM-VAPTPVSAL 250
Cdd:PRK08667 167 YFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGA---SAGILSLVFLLLFLGFGI-KAGIIPFHKWLPYAHpASPSNVSAL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 251 LHAVaVVKAGVFSVLKVVIYIFGleqlKEISLTDVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALL-- 328
Cdd:PRK08667 243 MSGV-MLKVAVYGLVRFLMDVLS----PELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLyv 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 329 ---------ASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAG 399
Cdd:PRK08667 318 ifgvygldtLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNG 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 400 TWSKWYLTIG-----ALDADKLVIVAVLMISSL-LNIAYLLPIPMKAFFNQTDSASRPWTWGEVQEAPVAILIAIGITSF 473
Cdd:PRK08667 398 FASELLLYESffqsfSVADPLIKILLFSVLAIFaLTSALAAACFVKAFGITFLAMPRSQEARSAKEVSKPMLIGPAVLAV 477
|
490
....*....|....*
gi 1057059437 474 SCVALFFFPQPLIEL 488
Cdd:PRK08667 478 ACLVLGLFSVQIFSL 492
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
7-492 |
2.74e-34 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 137.27 E-value: 2.74e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 7 DAATLINLSIAIPLIGGVLVLLTGKIPNLREA-ASLATAFILFTLVLEITQRIFAGEAMSTTwVELFPGIGLSFDI--EP 83
Cdd:PRK12649 2 DSFNAIVLAIFLPFILAWTVPVLEKVLKQRIGwFAAAIAFTSFALIAQVAPEVIHGTIITGS-ISWLPSAGVEFSIyaDG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 84 LGVVFAIVASALWPVTTIYAIGYMRghNEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVTHAGTDA 163
Cdd:PRK12649 81 LAVLIGLIASGIGVIIMSYSNGYMS--HKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRP 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 164 AKQGGRVYLGILISTSIAFLLLAILGTWQVAGTLDFTP----GGVFANADGAPILGILLVLFCYGIG-KAALMPFHRWLP 238
Cdd:PRK12649 159 ESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATilqdSELIENIKGHPLFLITLILIFIGAAaKSAQGPFYIWLP 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 239 AAMVAPTPVSALLHAVAVVKAGVFSVLKVVIYIFGLEQ-LKEISLTDVMlyiaatTVLLSSCIAMTKDNLKARLAYSTVS 317
Cdd:PRK12649 239 NAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAwFILVSGTGMI------TMVLAGFLAFRQTDIKAILAYSTIS 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 318 QLSYITVGALLASP----IAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIG 393
Cdd:PRK12649 313 QLAYLMTMYGYTTYhepgLGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAG 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 394 LPPMAGTWSKWYLTIGALDADKLV-------IVAVLMISSLLNIAYLLPIPMKAFFNQTDSASRPwtwGEVQEAPVAILI 466
Cdd:PRK12649 393 IPPLNGFLSKEMFYETSVEMGALIggpftiiIPAVAVLGGVFTFAYSIKLIDGIFLGERTHDHLP---HHIHEAPYVMLI 469
|
490 500
....*....|....*....|....*.
gi 1057059437 467 AIGITSFscVALFFFPQPLIELVNLI 492
Cdd:PRK12649 470 PAAFLAG--LVILFGLVPSIPIHNII 493
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
20-488 |
3.82e-33 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 132.71 E-value: 3.82e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 20 LIGGVLVLLTGKipNLREAASLATAFILFTLVLEITQrifaGEAMSTTWvelfpgigLSFDIEPLGV-----VFAIVASA 94
Cdd:PRK12668 13 IAGALLVPFLPG--RARKALLLLAPVLAVLAVLTVPE----GTYLTVTF--------LGFDLVLGRVdklsrVFGLIFGI 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 95 LWPVTTIYAIgymrgHNEEN--QTRFFFCFALAISSVmaicFSGNLLTLFVFYEVLTLSTYPLVTHAGTDAAKQGGRVYL 172
Cdd:PRK12668 79 MAFIGVIYAL-----HVKDPgqHVAALLYVGSALGAV----FAGDLLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 173 GILIsTSIAFLLLAILGTWQVAGTLDFTPggvfanADGAPILGILLVLFCYGIgKAALMPFHRWLPAAMVAPTPVSALLH 252
Cdd:PRK12668 150 LVHV-LGGVLLLAGILLHYAETGSFAFGA------IAGLGGTAAWLILIGFGV-NAAFPPLHAWLPDAYPEATVTGSVFL 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 253 AVAVVKAGVFSVLKVviyifgleqlkeISLTDVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALLASPI 332
Cdd:PRK12668 222 SAFTTKTAVYALARA------------FPGTELLIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTAL 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 333 AAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSKwYLTIGALD 412
Cdd:PRK12668 290 AINGAVAHAFNHILYKGLLFMSAGAVLYRTGTEKLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSK-SMIISAAG 368
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1057059437 413 ADKLVIVAVLMI--SSLLNIAYLLPIPMKAFFnQTDSASRpwtwgeVQEAPVAILIAIGITSFSCVALFFFPQPLIEL 488
Cdd:PRK12668 369 EDHYVWVWLLLLlaSAGTFLHFGIKLPYFAFF-GGDSGLR------VKDAPRNMLVAMGIAAFLCIAIGVYPQALYAL 439
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
12-490 |
2.05e-32 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 129.29 E-value: 2.05e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 12 INLSIAIPLIGGVLVLLT-----GKIPNLREAASLATAfiLFTLVLEITQRIFAGEAMSTTWVELFPGIGLSFDIE--PL 84
Cdd:TIGR01972 1 LSLLIFLPLIGALLILLLpsnkdGKARWIALVVALATL--LLSLLLLFQFDPTGSGFQFTEDIPWIPALGISYHLGvdGI 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 85 GVVFAIVASALWPVTTIYAigymrGHNEENQTRFFFCFALAISSVMAICF-SGNLLTLFVFYEVLTLSTYPLVTHAGTDa 163
Cdd:TIGR01972 79 SLLLVLLTALLTLLAILAS-----WESIQKRVKEFYALLLLLEAGVIGVFlALDLFLFYVFWEAMLIPMYLLIGVWGGP- 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 164 akqgGRVYLGI--LISTSIA--FLLLAILG-TWQVAGTLDFTPGGVFANADGAPILGILLVLFCYGIgKAALMPFHRWLP 238
Cdd:TIGR01972 153 ----NRIYAAMkfFLYTLAGslLMLLAILGlYFLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAV-KVPLFPLHTWLP 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 239 AAMV-APTPVSALLHAVaVVKAGVFSVLKvviyiFGLEQLKEISL--TDVMLYIAATTVLLSSCIAMTKDNLKARLAYST 315
Cdd:TIGR01972 228 DAHVeAPTAGSVILAGV-LLKMGTYGFLR-----FNLPLFPDASLyfAPVLAALGVIAIIYGALIALAQTDIKRLIAYSS 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 316 VSQLSYITVGALLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLP 395
Cdd:TIGR01972 302 ISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLP 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 396 PMAGTWSKWYLTIGALDAdKLVIVAVLMISSLLNIAYLLPIPMKAFFNQTDSASRPwtwgEVQEAPVAILIAIGITSFSC 475
Cdd:TIGR01972 382 GTSGFVGEFLILLGSFKV-NPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVA----EFPDLNGREIAVLAPLVVLI 456
|
490
....*....|....*
gi 1057059437 476 VALFFFPQPLIELVN 490
Cdd:TIGR01972 457 LFLGLYPNPLLDLTE 471
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-492 |
2.80e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 129.08 E-value: 2.80e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 11 LINLSIAIPLIGGVLVLLTgKIPNLREAASLATAFILFTLVLEITQRIFAGEAMSTTWVELFPGIGLSFDIEPLGVVFAI 90
Cdd:PRK12662 5 LPILQVIIPLLSAVVCALL-KNRKLVKIISCIVVAVSFFIALVLFVQVYSGGVIKYSLGGWGPPYGIELRVDILSATMLV 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 91 VASALWPVTTIYAIGYMRGHNEENQ-TRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVTHAGTDAAKQGGR 169
Cdd:PRK12662 84 LVNFIAVMSVLYGIYPNRKEISVNKiPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAF 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 170 VYLgILISTSIAFLLLAILGTWQVAGTLDFtpGGVFANADGAPI-----LGILLVLFCYGIgKAALMPFHRWLPAAM-VA 243
Cdd:PRK12662 164 EYL-IIGTIGATFYLIGIGFLYAITGTLNM--GDMFLIIQDLPTnraiqIGVLFIMVGLFI-KAALFPFHKWLIQAYsEA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 244 PTPVSALLHAVAVvKAGVFSVLKVVIYIFGLE-QLKEISLTDVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYI 322
Cdd:PRK12662 240 PSFISVFFSGTST-KVMIYLIIRIVYDVFKANfVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYI 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 323 TVGALLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWS 402
Cdd:PRK12662 319 ILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVA 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 403 KWYLTIGALDADKLVIVAVLMISSLLNIAYLLPIPMKAFFNQTDSASRpwTWGEVQEAPVAILIAIGITSFSCVALFFFP 482
Cdd:PRK12662 399 KWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKIVEALYFESRMVESK--ANDKAFKTPNAMVLCIWIMAILSIIVGIYP 476
|
490
....*....|
gi 1057059437 483 QPLIELVNLI 492
Cdd:PRK12662 477 IPLTLISEKI 486
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
14-447 |
7.54e-32 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 129.04 E-value: 7.54e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 14 LSIAIPLIGGVLVLLTGKIPNLREAASLATAFILFTLVLEITQRIFAGEAMSTTWVELFPGIGLSFDIEPLGVVF-AIVA 92
Cdd:MTH00020 4 LVLFLPLLGALLSGLFGRKIGEKGAGILTSSCLIISLSWSFLIFYEILFNSSTTYIKLWRWLDSDLLTVYFGLQFdGLVA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 93 SALWPVTT------IYAIGYMRGhnEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVTHAGTDAAKQ 166
Cdd:MTH00020 84 IMLLVVTTvstlvhIFSTAYMRG--DPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEAN 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 167 GGRVYLGILISTSIAFLLLAILGTWQVAGTLDFTpgGVFANADGAP---ILGILLVLFCYGIGKAALMPFHRWLPAAMVA 243
Cdd:MTH00020 162 KAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFS--SVFNMVVSAPssdITLICLFLFIGAVGKSAQLGLHTWLPDAMEG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 244 PTPVSALLHAVAVVKAGVFSVLKvviyifgLEQLKEISLTDVMLY--IAATTVLLSSCIAMTKDNLKARLAYSTVSQLSY 321
Cdd:MTH00020 240 PTPVSALIHAATMVTAGVFLLIR-------SSPLFEQAPLALIIVtiVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGY 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 322 ITVGALLASpiaAAGATMHIATHAVGKITLFFCAGAIMVA-SHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGT 400
Cdd:MTH00020 313 MVVACGLSH---YSISLFHLMNHAFFKALLFLSAGSVIHAlSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGF 389
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1057059437 401 WSKWYLTIGALDADKLVIVAVLMISS-LLNIAYLLPIPMKAFFNQTDS 447
Cdd:MTH00020 390 YSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIYLTFLSNTNL 437
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
11-489 |
8.39e-32 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 127.76 E-value: 8.39e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 11 LINLSIAIPLIGGVLVLLTGKIPNLREAASLATAFILFTLVLEITQRIFAGEAMSTTWVELFPGIGLSFDIEPLGVVFAI 90
Cdd:PRK12663 5 LLILPMLLPLLCGLVLVFLRNRDRLQRYLAIGTLTILTLISLALLIYVQRHGPITLDFGGWLPPFGIQFTGDSLSALMVT 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 91 VASALWPVTTIYAIGymRGHNEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVTHAGTDAAKQGGRV 170
Cdd:PRK12663 85 TASFVATAIMAYGFG--DIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQEREQLRGAIK 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 171 YlGILISTSIAFLLLAILGTWQVAGTLDFTPGGVFANA--DGAPILGILLVLFCYGIGKAALMPFHrWLPAAMVAPTPVS 248
Cdd:PRK12663 163 Y-VVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDmgDTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 249 ALLHAVAVVKAGVFSVLKVVIYIFGLEQlkeISLTDVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALL 328
Cdd:PRK12663 241 AALFAALLTKVGIYALIRVFTLLFPQER---ELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLAL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 329 ASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSKWYLTI 408
Cdd:PRK12663 318 GTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQ 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 409 GALDADKLVIVAVLMISSLLNIAYLLPIPMKAFFNQTDSASrpwtwGEVQEAPVAILIAIGITSFSCVALFFFPQPLIEL 488
Cdd:PRK12663 398 GALDNGAYILLALMLITSLITMYSLFRIFFLAYWGDKDGEE-----VNFKPIPLYRKLPLSILAVVVIAMGIAAEPLLNL 472
|
.
gi 1057059437 489 V 489
Cdd:PRK12663 473 T 473
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
9-492 |
1.42e-31 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 126.86 E-value: 1.42e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 9 ATLINLSIAIPLI----GGVLVLLTGKIPNLREAASLATAFILFTLVLEITQRIFAGEAMSTtwvelfpgIGLSFDIEPL 84
Cdd:PRK05777 3 ITSLNLILLLPELillgAAVVLLLIDAFVRRHSRRATLAVLALLLALVALLFVLGAAGGGTA--------FGGMLVVDGF 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 85 GVVFAIVASALWPVTTIYAIGYMRGHNeenQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVTHAGTDAA 164
Cdd:PRK05777 75 ALFLKGLILLASLLALLLARPYLEDRG---RGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRR 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 165 KQGGRVYLGILISTSIAFLLLAILGTWQVAGTLDFTPGGVFANADGAPILGIL--LVLFCYGIG-KAALMPFHRWLPAam 241
Cdd:PRK05777 152 SLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKALADGSGNSLLLLfgLVFLLVGLAfKLSAVPFHMWTPD-- 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 242 V---APTPVSALLHAVAVVkAGVFSVLKVVIYIFGLEQlkeISLTDVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQ 318
Cdd:PRK05777 230 VyegAPTPVTAFLATAPKI-AAFAVLLRLLVVAFGGLS---EDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAH 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 319 LSYITVGALLASPIAAAGATMHIATHAVGKITLFfcaGAIMVASHKK----NISDMVGLGRKMPLTMGAFAIGAISIIGL 394
Cdd:PRK05777 306 AGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF---GVISLLRRKGgeaeSISDFAGLSKRSPLLAAVMTIFMLSLAGI 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 395 PPMAGTWSKWYLTIGALDADKLVIVAVLMISSLLNIAYLLPIPMKAFFNQtdsasrPWTWGEVQEAPVAILIAIGITSFS 474
Cdd:PRK05777 383 PPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVIKLMYFDE------PPRDAPVNWPLSAGGAVLSVSALL 456
|
490
....*....|....*...
gi 1057059437 475 CVALFFFPQPLIELVNLI 492
Cdd:PRK05777 457 VLVLGIFPQPLLDLAAQA 474
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
9-488 |
8.01e-31 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 125.04 E-value: 8.01e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 9 ATLINLSIAIPLIGGVLVLLtgkIPNLREAASLATAFILFTLVLeitqrifageAMSTTWVELFPG----IGLSFDIEPL 84
Cdd:PRK06458 4 SILFALLLLIPLLASLLLFA---LRKRRLVATLNVLGITLTLIL----------ALWLVFTVPDAGeifaAGLWFFIDDL 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 85 GVVFAIVASALWPVTTIYAIGYMR-----GHNEENQTRFFFCFALAISSVMAICF-SGNLLTLFVFYEVLTLSTYPLVTH 158
Cdd:PRK06458 71 NVFFLALIGVVGFLTSLYSIGYMRhevehGELSPVTLRLYYGMYQLFLFTMLLALtSNNLGLMWVAIEATTLSSALLVGI 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 159 AGTDAAKQGGRVYLgILISTSIAFLLLAILGTWQVAGTLDFTPGGVF--------ANADGAPILGILLVLFCYGIG-KAA 229
Cdd:PRK06458 151 YRTRASLEAAWKYI-IICSVGVAFALFGTILVYANAATVMGDGEMAIlwtellkhASLLDPTLMKLAFVFLLIGFGtKVG 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 230 LMPFHRWLPAAMV-APTPVSALLHAVaVVKAGVFSVLKvvIYIFGLEQLKEISLTDVMLYIAATTVLLSSCIAMTKDNLK 308
Cdd:PRK06458 230 LFPMHAWLPDAHSeAPSPVSALLSGV-LLNVALYAVLR--YYILIDAAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIK 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 309 ARLAYSTVSQLSYITVGALLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGA 388
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGA 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 389 ISIIGLPPMAGTWSKWYLTIGALDADKLVIVAVLMISSLLNIAYLLPIPMKAFFNQTDSASRPWTWGEVQEAPVAILIAI 468
Cdd:PRK06458 387 LAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVRRVAGMVFGEPPEAVNRGDLGWLTTSPMFVHLVL 466
|
490 500
....*....|....*....|
gi 1057059437 469 GItsfscVALFFFPQPLIEL 488
Cdd:PRK06458 467 VL-----VLGLYIPQPLVRW 481
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-445 |
1.31e-29 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 121.59 E-value: 1.31e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 11 LINLSIAIPLIGGVLVLLTGKIPNLREAASLATAFILFTLVLEITQRIFAGEAMSTTWVELFPGIGLSFDIEPLGVVFAI 90
Cdd:PRK07691 5 LVILPILIPVITAILLIFLGKRPIIQRYVALIGSLLTLVAAIILVANVYKHGIQTLELGNWKAPFGIVFVADMFAALLVL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 91 VASALWPVTTIYAIGYMRGHNEENQTRFFFCFALAisSVMAICFSGNLLTLFVFYEVLTLSTYPLVTHAGTDAAKQGGRV 170
Cdd:PRK07691 85 TSSIITFLVILYSFQTIGIERERYYYYPSVLFMLA--GVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRESIK 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 171 YLGILISTSiAFLLLAILGTWQVAGTLDFTPGGVF---ANADGAPILGILLVLFCYGIG-KAALMPFHRWLPAAMVAP-T 245
Cdd:PRK07691 163 YVLINVVSS-AFFVVAVAILYSVVGTLNMADISVKiaeLSAGQTGLITVVAILFLFVFAtKAGLFPLYFWLPGSYYAPpI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 246 PVSALLHAVaVVKAGVFSVLKVVIYIFglEQLKEISLTdVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVG 325
Cdd:PRK07691 242 AIAALFGAL-LTKVGVYAIARTFTLFF--SHDTSFTHY-LILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVG 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 326 ALLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSKWY 405
Cdd:PRK07691 318 VAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFF 397
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 1057059437 406 LTIGALDADKLVIVAVLMISSLLNIAYLLPIPMKAFFNQT 445
Cdd:PRK07691 398 IVEGTFEAGFYVSGIIVLLSSLLVLYSVIKIFLKGFWGEP 437
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
98-403 |
1.88e-29 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 122.69 E-value: 1.88e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 98 VTT------IYAIGYMrgHNEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLV----THAGTDAAKQG 167
Cdd:CHL00025 100 ITTvgilvlIYSDNYM--SHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgfwfTRPIAANACQK 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 168 grvylgilistsiAF---------LLLAILGTWQVAGTLDF-TPGGVFAN---ADGA-PILGIL--LVLFCYGIGKAALM 231
Cdd:CHL00025 178 -------------AFvtnrvgdfgLLLGILGFYWITGSFEFrDLFEIFNNliyNNEVnLLFATLcaFLLFLGPVAKSAQF 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 232 PFHRWLPAAMVAPTPVSALLHAVAVVKAGVFSV------LKVVIYIFGLeqlkeISLtdvmlyIAATTVLLSSCIAMTKD 305
Cdd:CHL00025 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVarllplFIVIPYIMNL-----ISL------IGIITALLGATLALAQK 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 306 NLKARLAYSTVSQLSYItvgaLLASPIAA-AGATMHIATHAVGKITLFFCAGAI---MVA----SHKK--NISDMVGLGR 375
Cdd:CHL00025 314 DIKRGLAYSTMSQLGYM----MLALGIGSyRAALFHLITHAYSKALLFLGSGSVihsMEPivgySPDKsqNMVLMGGLRK 389
|
330 340
....*....|....*....|....*...
gi 1057059437 376 KMPLTMGAFAIGAISIIGLPPMAGTWSK 403
Cdd:CHL00025 390 YMPITKTTFLLGTLSLCGIPPLACFWSK 417
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
75-451 |
2.70e-29 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 122.17 E-value: 2.70e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 75 IGLSFDIEPLGVVFAIVASALWPVTTIYAIGYMrGHNEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYP 154
Cdd:PRK12646 70 INLDLRLDGLSLMFSLIISLIGIAVFFYATQYL-SSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 155 LVTHAGTDAAKQGGRVYLGILISTSIAFLLLAILGTWQVAGTLDFTPGGVFANADGAPILGILLVlFCYGIG---KAALM 231
Cdd:PRK12646 149 LISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHGLFIPMI-FMFLLGaftKSAQF 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 232 PFHRWLPAAMVAPTPVSALLHAVAVVKAGVFSVLKVViyifgleqlKEISLTDVMLYIAAT----TVLLSSCIAMTKDNL 307
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFT---------PLLGLSNMYIYIVTFvgliTMLFGSITALKQWDL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 308 KARLAYSTVSQLSYITVGALLASPIAAA--------------GATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGL 373
Cdd:PRK12646 299 KGILAYSTISQLGMIMAMVGIGGGYAQHqqdaiasiyvfvlfAALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGM 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 374 GRKMPLTMGAFAIGAISIIGLPPMAGTWSKWYLTIGALDADKL---------VIVAVLMISSLLNIAYLLPIPMKAFFNQ 444
Cdd:PRK12646 379 RQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLsqfslismiIIVFIGVIASIFTFTYALYMVKEVFWGK 458
|
....*..
gi 1057059437 445 TDSASRP 451
Cdd:PRK12646 459 YDSKVFT 465
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
68-403 |
5.84e-29 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 120.83 E-value: 5.84e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 68 WVE---LFPGIGLSFDIepLGVVFAIVASALWPVTTIYAIGYMRghNEENQTRFFFCFALAISSVMAICFSGNLLTLFVF 144
Cdd:MTH00032 64 WIEseiFITHIGLLYDT--LSVTMLLVISSISTLVHIYSTSYMS--DDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIG 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 145 YEVLTLSTYPLVTHAGTDAAKQGGRVYLGILISTSIAFLLLAILGTWQVAGTLDFTP-------------GGVFANADGA 211
Cdd:MTH00032 140 WEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTfnggsvgsgimdrGYYGGGAYES 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 212 P-----ILGILLVLFCygIGKAALMPFHRWLPAAMVAPTPVSALLHAVAVVKAGVFsvlkVVIYIFGLEQLKEISLTDVM 286
Cdd:MTH00032 220 PlapfaIIGILLLIGC--IGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVF----LMIRSFPLFEKAPLTLLIIT 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 287 LYiAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVgaLLASPIAAAGATMHIATHAVGKITLFFCAGAIM--VASHK 364
Cdd:MTH00032 294 IF-GALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVL--IIGIEGSHNVGLFHLVNHAFFKALLFLSAGSVIhsTTVDE 370
|
330 340 350
....*....|....*....|....*....|....*....
gi 1057059437 365 KNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSK 403
Cdd:MTH00032 371 QDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSK 409
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
62-427 |
6.74e-29 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 120.40 E-value: 6.74e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 62 EAMSTTWVELfPGIGLSFDIE--PLGVVFAIVASALWPVTTIYAIGYMrgHNEENQTRFFFCFALAISSVMAICFSGNLL 139
Cdd:PRK07390 67 QQLSFPWLQV-ADLDLSLSLEisPVTLGALELITGLSLLAQIYALGYL--EKDWGLARFFALLGFFEAAMSGLALSDSLF 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 140 TLFVFYEVLTLSTY---------PLVTHAGTDA--AKQGGRVylgilistsiaFLLLAILGTWQVAGTLDFTpgGVFANA 208
Cdd:PRK07390 144 FSYVLLEILTLSTYllvgfwyaqPLVVTAARDAflTKRVGDL-----------LLLMGVVALSPLAGTLNFS--DLAAWA 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 209 DGAPILGILLVLFCYG-----IGKAALMPFHRWLPAAMVAPTPVSALLHAVaVVKAGVFsvlkVVIYIFGLEQLKEISLt 283
Cdd:PRK07390 211 ATANLDPLTATLLGLAliagpTGKCAQFPLHLWLDEAMEGPNPASILRNSV-VVATGAW----VLIKLQPVLALSPVAL- 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 284 DVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALLASPIAAagaTMHIATHAVGKITLFFCAGAIMVASH 363
Cdd:PRK07390 285 TVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIA---LLLLLTHAIAKALLFMSVGSIILTTI 361
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1057059437 364 KKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSKWYLTIGALDADKLVIVAVLMISSL 427
Cdd:PRK07390 362 TQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNAL 425
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
41-487 |
8.94e-29 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 120.42 E-value: 8.94e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 41 LATAFILFTLVLEITQRIFAGEAMSTT--WVelfPGIGLSFD--IEPLGVVFAIVASALWPVTTIYAIGYMRGHNEenQT 116
Cdd:PRK12645 35 LPVPVVLFIYFLSLIPTTMSGNTVMKTlpWI---PSLGINFTlyVDGLSLLFALLITGIGSLVVLYSIYYLSKKKE--QL 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 117 RFFFCFALAISSVM-AICFSGNLLTLFVFYEVLTLSTYPLVTH-AGTDAAKQGGRVYLGILISTSIA----FLLLAILGt 190
Cdd:PRK12645 110 GNFYVYLLLFMGAMlGVVLSDNLIVLYLFWELTSISSFLLISYwYEREASRYGAQKSMLITVFGGLSmlggFILLYIMT- 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 191 wqvaGTldFTPGGVFANADGAP-----ILGILLVLFCyGIGKAALMPFHRWLPAAMVAPTPVSALLHAVAVVKAGVFSVL 265
Cdd:PRK12645 189 ----GS--FSIREMIANADEIQnsplfIPAMILILLG-AFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVA 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 266 KVVIyIFGLEQLKEISLTDVMLyiaaTTVLLSSCIAMTKDNLKARLAYSTVSQLSYIT----VGAL---------LASPI 332
Cdd:PRK12645 262 RFTP-IFAGSQVWFWTVTLVGL----ITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMsllgIGAAslhyqgddsKIYAA 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 333 AAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSK-WYLT---- 407
Cdd:PRK12645 337 AITAAIFHLINHATFKGSLFMIVGIVDHETGTRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKeMFFEsmln 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 408 -----IGALDADKLVIVAVLMISSLLNIAYLLPIPMKAFFNQTDSASRPwtwGEVQEAPVAILIAIGITSFSCVALFFFP 482
Cdd:PRK12645 417 ateanLFSLDTWGVLFPVIAWVASVFTFVYSIIFIFKTFFGKYKPEQLP---KKAHEAPIGMLISPIILASLVVVFGLFP 493
|
....*....
gi 1057059437 483 ----QPLIE 487
Cdd:PRK12645 494 niltNSIIE 502
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
75-403 |
2.79e-25 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 109.35 E-value: 2.79e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 75 IGLSFdiepLGVVFAIVASALWpvttiYAIGYMRGhnEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYP 154
Cdd:MTH00209 53 MSLLF----SSVVLLISGSVMW-----FSTSYMAG--EKFKKRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 155 LVTHAGTDAAKQGGRVylgILISTSI--AFLLLAI-----LGTWQVagtldftpggVFANADGAPILGILLVLFCYGIGK 227
Cdd:MTH00209 122 LVIYYQNSKSLSAGML---TALTNRVgdALLILSIawmlmHGNWNI----------FYLNFNSNLGSVISVLIVLAAMTK 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 228 AALMPFHRWLPAAMVAPTPVSALLHAVAVVKAGVFSVLKVVIYIFGLeqlkeISLTDVMLYIAATTVLLSSCIAMTKDNL 307
Cdd:MTH00209 189 SAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSS-----PFFSMSLLLLGSLTTLMASMSANVESDL 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 308 KARLAYSTVSQLSYITVGALLASPIAaagATMHIATHAVGKITLFFCAGAIMVA-SHKKNISDMVGLGRKMPLTMGAFAI 386
Cdd:MTH00209 264 KKIIALSTLSQLGLMMCSLGLNQPEL---AFFHLITHALFKALLFICAGNIIHShGHSQDIRMVGNLWYQMPITSICLNI 340
|
330
....*....|....*..
gi 1057059437 387 GAISIIGLPPMAGTWSK 403
Cdd:MTH00209 341 ANLSLCGIPFLAGFYSK 357
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
64-403 |
8.93e-25 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 107.73 E-value: 8.93e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 64 MSTTWVELFP-GIGLSFDIEPLGVVFAIVAsalWPVTT---IYAIGYMrgHNEENQTRFFFCFALAISSVMAICFSGNLL 139
Cdd:MTH00211 59 TNWSWINLGLfSLNLSFKFDFYSIFFTSVA---LYVTWsilEFSLWYM--SSEPNINRFFKYLLLFLIFMLILVSANNLF 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 140 TLFVFYEVLTLSTYPLV------THAGTdAAKQG---GRV-YLGILIStsiAFLLLAILGTWqvagtlDFTPGGVFANAD 209
Cdd:MTH00211 134 QLFIGWEGVGIMSFLLIswwygrSDANT-AALQAviyNRIgDIGLLLS---MVWLLLNLNSW------EISQLFILNLDL 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 210 GAPILGILLVlfcyGIGKAALMPFHRWLPAAMVAPTPVSALLHAVAVVKAGVFSVLKVViyifGLEQLKEISLTDVMLYI 289
Cdd:MTH00211 204 TLFLLGLLLA----AMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLS----PLFQNNQLILGAVLLLG 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 290 AATTVLLSSCiAMTKDNLKARLAYSTVSQLSYITVGALLASPIAaagATMHIATHAVGKITLFFCAGAIMVASHkkNISD 369
Cdd:MTH00211 276 ALTMLFGALC-ALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQL---AFLHICTHAFFKAMLFMCSGSIIHGLN--NEQD 349
|
330 340 350
....*....|....*....|....*....|....*..
gi 1057059437 370 ---MVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSK 403
Cdd:MTH00211 350 irkMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSK 386
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
76-473 |
4.04e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 105.86 E-value: 4.04e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 76 GLSFDIepLGVVFAIVASALWPVTTIYAIGYMRGhnEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPL 155
Cdd:MTH00210 75 GLQFDS--LTSTMLIVITSVSALVHIYSTGYMSG--DPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 156 VTHAGTDAAKQGGRVYLGILISTSIAFLLLAILGTWQVAGTLDF-TPGGVFANADGAPILGIL-LVLFCYGIGKAALMPF 233
Cdd:MTH00210 151 INFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFsTISSLLVTNINKESLTIIcLLLFIGAVGKSAQLGL 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 234 HRWLPAAMVAPTPVSALLHAVAVVKAGVFsvlkVVIYIFGLEQLKEISLTdVMLYIAATTVLLSSCIAMTKDNLKARLAY 313
Cdd:MTH00210 231 HTWLPDAMEGPTPVSALIHAATMVTAGVF----LIIRSGPLFEGSPLALT-IVTILGALTAFFAATVGVVQNDLKKVIAY 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 314 STVSQLSYITVGALLASpiaAAGATMHIATHAVGKITLFFCAGAIMVA-SHKKNISDMVGLGRKMPLTMGAFAIGAISII 392
Cdd:MTH00210 306 STCSQLGYMVMVCGISN---YSTSLFHLMNHAFFKALLFLSAGSVIHAvSDEQDMRKMGGLIKSIPFTYVMILIGSLSLM 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 393 GLPPMAGTWSKwyLTIGALDADKLVIVAVL---MISSLLNIAYLLPIPMKAFFNQTDSASRPWTWgeVQEAPVAILIAIG 469
Cdd:MTH00210 383 GFPYLTGFYSK--DLILELTYDKYYIAFAYwlgSFSALLTAFYSIRLIYLTFITNTNSKKEVFIG--VHESSWNITFPLL 458
|
....
gi 1057059437 470 ITSF 473
Cdd:MTH00210 459 LLAF 462
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
227-403 |
4.69e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 105.62 E-value: 4.69e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 227 KAALMPFHRWLPAAMVAPTPVSALLHAVAVVKAGVFsvLKVVIYIFgleqLKEISL-TDVMLYIAATTVLLSSCIAMTKD 305
Cdd:MTH00207 192 KSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVF--LLIRFYPF----LSSTYWfNPALLLTASLTMLMAGLSAMTEC 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 306 NLKARLAYSTVSQLSYITVGALLASPIAaagATMHIATHAVGKITLFFCAGA-IMVASHKKNISDMVGLGRKMPLTMGAF 384
Cdd:MTH00207 266 DMKKIIALSTLSQLGVMMASLGLGMPKL---ALFHLITHALFKALLFVCAGSlIHSHHHSQDLRTMGNLTNQMPLTTSCL 342
|
170
....*....|....*....
gi 1057059437 385 AIGAISIIGLPPMAGTWSK 403
Cdd:MTH00207 343 LIANLALCGSPFLSGFYSK 361
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
175-403 |
1.86e-23 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 103.77 E-value: 1.86e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 175 LISTSIAFLLLaiLGTWQVAGTLDFTPGGvfanadgapILGILLVLFCygIGKAALMPFHRWLPAAMVAPTPVSALLHAV 254
Cdd:MTH00151 150 LILLSIALLVL--LGHWSILSMWDFKLSG---------WLGLLLVLAA--MTKSAQIPFSSWLPAAMAAPTPVSALVHSS 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 255 AVVKAGVFsvlkVVIYIFGLEQLKEISLTdVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALLASPiaa 334
Cdd:MTH00151 217 TLVTAGVF----LLIRFFPFLSSSSGFSS-FLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMP--- 288
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 335 AGATMHIATHAVGKITLFFCAGA-IMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSK 403
Cdd:MTH00151 289 SLALFHLYTHALFKALLFLCAGSiIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSK 358
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
11-399 |
1.52e-22 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 100.66 E-value: 1.52e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 11 LINLSIAIPLIGGVLVLLTGKIPN-LREAASLATAFILFTLVLEITQRIFAGEAM-----STTWVELFpGIGLSFDIEPL 84
Cdd:PRK05846 5 LLSLLIFLPLIGGLLVLLTERFGArLARWIALIGTLLTLLLSLVLWIGFDSSNAGfqfveKHPWIPRF-GISYHLGVDGI 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 85 GVVFAIVASALwpvtTIYAIGYMRGHNEENQTRFFFCFaLAISSVMAICF-SGNLLTLFVFYEVLTLSTYPLVthagtda 163
Cdd:PRK05846 84 SLLLVVLTALL----TPLAVLASWEEIKKRVKFYMAAL-LWLEGGVIGVFaALDLLLFYVFFEAMLIPMYFLI------- 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 164 AKQGG--RVYLGI--LISTSI--AFLLLAILG----TWQVAGTLDFTPGGVFANADGAPILGILLVLFCYGIgKAALMPF 233
Cdd:PRK05846 152 GVWGGknRIYAATkfFLYTLLgsLLMLVAIIYlvvvYYNATGTFDIADLLNLPLPPGVQYWLFLAFFIAFAV-KMPMFPL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 234 HRWLPAAMV-APTPVSALLHAVaVVKAGVFSVLKvviyiFGLEQLKEIS--LTDVMLYIAATTVLLSSCIAMTKDNLKAR 310
Cdd:PRK05846 231 HTWLPDAHVqAPTAGSVLLAGI-LLKMGAYGLLR-----FSLPLFPDASheFAPIIITLGVIAIIYGALVALAQTDIKKL 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 311 LAYSTVSQLSYITVGALLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAIS 390
Cdd:PRK05846 305 IAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMA 384
|
....*....
gi 1057059437 391 IIGLPPMAG 399
Cdd:PRK05846 385 SLGLPGTSG 393
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-465 |
2.63e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 100.04 E-value: 2.63e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 9 ATLINLSIAIPLIGGVLVLLTGKIPNLREAASLATafILFTLVLEITQrIFAGEAMSTTWVEL---FPGIGLSFDIEPLG 85
Cdd:PRK12665 2 PVLAPLPVLLPLLAAALTLVLGRRPRAQRAISLLA--LSAVLVLSAVL-LYLVDRDGTQAVQLggwDAPIGITLVVDRLS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 86 VVFAIVASALWPVTTIYAIGY-MRGHNEENQTRFFFCFALAISSVMAICF-SGNLLTLFVFYEVLTLSTYPLVTHAGTDA 163
Cdd:PRK12665 79 ALMLVVSSVVLLAVLVYAIGQgIRDGDEEQPVSIFLPTYLILVAGVSNAFlAGDLFNLYVGFEILLVASYVLLTLGATAA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 164 AKQGGRVYLGILISTSIAFlLLAILGTWQVAGTLDFTPGGVFANA--DGAPILGILLVLFCYGIgKAALMPFHRWLPAAM 241
Cdd:PRK12665 159 RVRAGVTYVMVSMVSSLLF-LIGIALVYAATGTLNMADLAVRLDElpSGTRTALFAVLLVAFGI-KAAVFPLSFWLPDSY 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 242 -VAPTPVSALLhAVAVVKAGVFSVLKVVIYIFgleqlKEISLTDVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLS 320
Cdd:PRK12665 237 pTAPAPVTAVF-AGLLTKVGVYAIIRTHTLLF-----PGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIG 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 321 YITVGALLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGT 400
Cdd:PRK12665 311 YMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGF 390
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1057059437 401 WSKWYL-TIGALDADKL--VIVAVLMISSLLNIAYLLPIPMKAFfnqtdsasrpwtWGEVQEAPVAIL 465
Cdd:PRK12665 391 IGKVALlEAGAEDGTWLawALVAGGVVTSLLTLYAVARVWTKAF------------WRAREDAPEGHL 446
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
118-486 |
3.71e-22 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 99.25 E-value: 3.71e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 118 FFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVTHAGTDA-AKQGGRVYLgILISTSIAFLLLAILGTWQVAGT 196
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRfSTEAGLKYF-ILGAFSSGLLLFGISLIYGFTGS 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 197 LDFTPGGVFANADGA--PILGILLVLFCYGIG-KAALMPFHRWLPAAMV-APTPVSALLhAVAVVKAGVFSVLKVVIYIF 272
Cdd:TIGR01770 183 LNFEDLLLFLSNGMLniSLLLLGIVLILVGLLfKLSAVPFHMWVPDVYEgAPTPVTAFF-SIVPKIAIFAVFLRLFLYIL 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 273 GLEQLkeiSLTDVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALLASPIAAAGATMHIATHAVGKITLF 352
Cdd:TIGR01770 262 FGFSE---AWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAF 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 353 FCAGAIMVASHK--KNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSKWYLTIGALDADKLVIVAVLMISSLLNI 430
Cdd:TIGR01770 339 GVLSLLRSYKDEwiEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGA 418
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1057059437 431 AYLLPIPMKAFFNqTDSASRPWTWGEVQEAPVAILIAIGITSFscvalFFFPQPLI 486
Cdd:TIGR01770 419 FYYLRVVKVMYFD-KPERRIPSNPQSKAQSLLLSISALFILFL-----GLFPSLIL 468
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
173-449 |
6.73e-22 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 99.27 E-value: 6.73e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 173 GILISTSIAFLLLailGTWQVAGTLdftpggVFANADGAPILGILLVLFCYGIGKAALMPFHRWLPAAMVAPTPVSALLH 252
Cdd:MTH00208 204 GIILFLSLSLINF---NSWNLNEIL------SLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLH 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 253 AVAVVKAGVFsvlkvviYIFGLEQLKEISLT--DVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALLAS 330
Cdd:MTH00208 275 SSTMVVAGVF-------LLIRTSPLISNSPWflSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQ 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 331 PIAaagATMHIATHAVGKITLFFCAGAImVASHK--KNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSK-WYLT 407
Cdd:MTH00208 348 PNL---ALFHICTHAFFKAMLFLCSGSI-IHSLNneQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKdLILE 423
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1057059437 408 IGALDADKLVIVAVLMISSLLNIAYLLPIPMKAFFNQTDSAS 449
Cdd:MTH00208 424 AGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSP 465
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
212-403 |
7.37e-22 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 99.08 E-value: 7.37e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 212 PILGILLVlfcyGIGKAALMPFHRWLPAAMVAPTPVSALLHAVAVVKAGVFsvlkVVIYIFGLEQLKEISLTdVMLYIAA 291
Cdd:MTH00004 211 PLLGLILA----ATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIF----LLIRTHPLLQNNQTALT-ICLCLGA 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 292 TTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALLASPIAaagATMHIATHAVGKITLFFCAGAIMvasHKKN----I 367
Cdd:MTH00004 282 LTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQL---AFLHISTHAFFKAMLFLCSGSII---HNLNneqdI 355
|
170 180 190
....*....|....*....|....*....|....*.
gi 1057059437 368 SDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSK 403
Cdd:MTH00004 356 RKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSK 391
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
212-403 |
2.56e-21 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 97.23 E-value: 2.56e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 212 PILGILLVlfcyGIGKAALMPFHRWLPAAMVAPTPVSALLHAVAVVKAGVFsvlkVVIYIFGLEQLKEISLTdVMLYIAA 291
Cdd:MTH00108 212 PLMGLLLA----ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVF----LLIRFHPLMENNKTIQT-LTLCLGA 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 292 TTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALLASPIAaagATMHIATHAVGKITLFFCAGAIMvasHKKN----I 367
Cdd:MTH00108 283 ITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHL---AFLHICTHAFFKAMLFMCSGSII---HNLNdeqdI 356
|
170 180 190
....*....|....*....|....*....|....*.
gi 1057059437 368 SDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSK 403
Cdd:MTH00108 357 RKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSK 392
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
212-403 |
9.51e-20 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 92.28 E-value: 9.51e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 212 PILGILLVlfcyGIGKAALMPFHRWLPAAMVAPTPVSALLHAVAVVKAGVFsvlkVVIYIFGLEQLKEISLTdVMLYIAA 291
Cdd:MTH00066 209 PLLGLILA----AAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIF----LLIRFHPLLENNQTALT-ICLCLGA 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 292 TTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALLASPIAaagATMHIATHAVGKITLFFCAGAIMvasHKKN----I 367
Cdd:MTH00066 280 LTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQL---AFFHICTHAFFKAMLFLCSGSII---HSLNdeqdI 353
|
170 180 190
....*....|....*....|....*....|....*.
gi 1057059437 368 SDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSK 403
Cdd:MTH00066 354 RKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSK 389
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
212-403 |
2.09e-19 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 91.43 E-value: 2.09e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 212 PILGILLVlfcyGIGKAALMPFHRWLPAAMVAPTPVSALLHAVAVVKAGVFsvlkVVIYIFGLEQLKEISLTDVMLYIAA 291
Cdd:MTH00137 217 PLLGLILA----ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIF----LLIRLSPLMENNQTALTTCLCLGAL 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 292 TTVLLSSCiAMTKDNLKARLAYSTVSQLSYITVGALLASPIAaagATMHIATHAVGKITLFFCAGAIMvasHKKN----I 367
Cdd:MTH00137 289 TTLFTATC-ALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQL---AFLHICTHAFFKAMLFLCSGSII---HSLNdeqdI 361
|
170 180 190
....*....|....*....|....*....|....*.
gi 1057059437 368 SDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSK 403
Cdd:MTH00137 362 RKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSK 397
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
11-442 |
1.96e-18 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 87.78 E-value: 1.96e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 11 LINLSIAIPLIGGVLVLLTGKIPNLREAASLATAFILFTLVL--EITQRIFAGEAMSTTWVelfPGIGLSFDiePLGVVF 88
Cdd:PRK06277 3 LLPLMVVFPMICAIIFNLLHGKDKLIKYLTFIVAILLPILPFlaSYGYYYFGGHGLVNGYH---SGITYLFN--PAKQII 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 89 AIVASAlwpVTTIYAIGYMRGHNEENQTRFFFCFALAisSVMAICFSGNLLTLFVFYEVLTLSTYPLVTHAGTDAAKQGG 168
Cdd:PRK06277 78 IFVLSL---IASLVLITGLGEKKSSGLYVFLMLMGLA--SVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGTEEAYKAA 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 169 RVYLgILISTSIAFLLLAILGTWQVAGTLDFTP--GGVFANADGAPILGILLVLF---CYGIGkaaLMPFHRWLPAAMVA 243
Cdd:PRK06277 153 LKYM-ILGNVAGSILLLGIGFLLASTGTLNITDihNALLVNPTSPVIYGGLLLLIfglLYGSG---LPPFHTIKSDIYAK 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 244 PTP-VSALLHAVAVVkaGVFSVLKVVIYIFGleQLKEISLTD-VMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLSY 321
Cdd:PRK06277 229 AKPfGSALLQTFSKF--VLVALMLVIFKLFG--GLSYFPSAQgVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGY 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 322 ITVGALLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTW 401
Cdd:PRK06277 305 VAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQ 384
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 1057059437 402 SKWYLTIGALDADkLVIVAVLMIssLLNIAYLLPIpMKAFF 442
Cdd:PRK06277 385 SKLMLAQAAMQAN-MPELAIIMI--IVSIGTFVSM-MKAFY 421
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
84-403 |
4.88e-18 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 87.12 E-value: 4.88e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 84 LGVVFAIVASALwpvttIYAIGYMrgHNEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVTH----- 158
Cdd:MTH00165 60 MSFVLFISSMVI-----YYSKSYM--SGDKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYyqnkk 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 159 ---AGT---------DAAkqggrvylgILIStsIAFLLlaILGTWQVAGTLDFTPGGVFANadgapILGILLVLfcYGIG 226
Cdd:MTH00165 133 synAGMltalsnrigDVA---------ILLS--IAWMM--NFGSWNFIFYLDFMKNSFEML-----LIGLLIML--AAMT 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 227 KAALMPFHRWLPAAMVAPTPVSALLHAVAVVKAGVFSVLKVVIYIFGLEqlkeisLTDVMLYIAATTVLLSSCIAMTKDN 306
Cdd:MTH00165 193 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSF------FSKFLLLISLLTMFMAGLGANFEFD 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 307 LKARLAYSTVSQLSyitvgaLLASPIAAAGATM---HIATHAVGKITLFFCAGAIMVAShkKNISD---MVGLGRKMPLT 380
Cdd:MTH00165 267 LKKIIALSTLSQLG------LMMSILSLGFPKLaffHLLTHALFKALLFLCAGSIIHNM--SNSQDirfMGGLSNFMPLT 338
|
330 340
....*....|....*....|...
gi 1057059437 381 MGAFAIGAISIIGLPPMAGTWSK 403
Cdd:MTH00165 339 SSCFNISNLSLCGFPFLSGFYSK 361
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
11-442 |
1.04e-16 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 82.44 E-value: 1.04e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 11 LINLSIAIPLIGGVLVLLTGKIPNLREAASLATAF----ILFTLVLEITQRIFAGEAMSTTWVELFPGIGLSFDIEPLGV 86
Cdd:PRK06473 1 MLSALIWIPLLGAILIGFWPSGINGKLARSVALVIasvlLLLSLVLAFQFDPGNPNQQFTEFIPWIDSLGLSYHLGVDGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 87 VFA-IVASALWPVTTIYAigymrGHNEENQTRFFFCFALAISSVMAICF-SGNLLTLFVFYEVLTLSTYPLVTHAGtdaA 164
Cdd:PRK06473 81 SLPlLVLNSLLTLIAIYS-----SDESIQRPRFYYSLLLLLNAGVSGAFlAQDLLLFFLFYELELIPLYLLIAIWG---G 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 165 KQGGRVYLGILISTSIA--FLLLAILGTWQVAG--TLDFTPGGVFANADGAPILGILLVLFCYGIgKAALMPFHRWLPAA 240
Cdd:PRK06473 153 QRRGYAATKFLLYTAISgiLILVSFLGLVWLSGasSFDYEPLRSHTLPLSTQLLLLAPILVGFGI-KIPLVPFHTWLPDA 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 241 MV-APTPVSALLHAVaVVKAGVFSVLKvviyiFGLEQLKE--ISLTDVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVS 317
Cdd:PRK06473 232 HVeASTPVSVLLAGV-LLKLGTYGLLR-----FGVGLFPEawVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIG 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 318 QLSYITVGALLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGL---GRKMPLTMGAFAIGAISIIGL 394
Cdd:PRK06473 306 HMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGI 385
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1057059437 395 PPMAGTWSKWYLTIGALDADKlVIVAVLMISSLLNIAYLLPIPMKAFF 442
Cdd:PRK06473 386 PGMVGFIAEFLVFRGSFPIFP-VQTLLCMIGTGLTAVYFLLLVNRVFF 432
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-485 |
8.80e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 79.89 E-value: 8.80e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 11 LINLSIAIPLI-GGVLVLLTGKIPNLREAASLATAFILFTLVLEITQRIFAGEAMS---TTWVELFpGIGLSFDiePLGV 86
Cdd:PRK12666 7 LIILPILLPLLtAALLLLLDERRRRLKRAISLASTLLLLAVAVALLASAAAGGIGVyllGNWPAPF-GIVLVLD--RLSA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 87 VFAIVASALWPVTTIYAIGymrghNEENQTRFF---FCFALaissvMAIC---FSGNLLTLFVFYEVLTLSTYPLVTHAG 160
Cdd:PRK12666 84 LMLLLTALLALAALLYALA-----GWDRAGPHFhalFQFQL-----MGLNgafLTGDLFNLFVFFEVLLAASYGLLLHGS 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 161 TDAAKQGGRVYLGILISTSIAFLL-LAILgtWQVAGTLDFTPGGV---FANADGAPIL----GILLVLFCYgigKAALMP 232
Cdd:PRK12666 154 GRARVRAGLHYVAINLVASSLFLIgVGLI--YGVTGTLNMADLAQriaQLPAADRALLeagaALLLVVFLI---KAAMWP 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 233 FHRWLPAA-MVAPTPVSALLhaVAVVKAGVFSVLKVVIYIFGLEQ-LKEISLTDVMLYIAATTVLLSSCIAMTKDNLKAR 310
Cdd:PRK12666 229 LNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLFGPEAgASAGFGQDWLLPGGLATLAFGAIGVLAAQRLRRL 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 311 LAYSTVsqlsyITVGALLA-----SPIAAAGATMHIATHAVGKITLFFCAGAI-----MVASHKKNISDMVGL------- 373
Cdd:PRK12666 307 AAYLVL-----VSSGTLLAaiglgNPAATAAALYYLVHSTLAAAALFLLADLVerqrgAAADRLAVTPELYDLdeeeeee 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 374 -GRKMPLTMG----AFAIGAISIIGLPPMAGTWSKWYLTIGALDADKL----VIVAVLMISSLLNIAYLLPIPMKAFFNQ 444
Cdd:PRK12666 382 vGVAIPATMAllglLFFICALALAGLPPLSGFLGKFALLQALLNPPGAgaawWLWALVLLSGLAALIALTRAGIRLFWAS 461
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 1057059437 445 TDSASRPWTWGEVqeAPVAILIAIgitsfsCVALFFFPQPL 485
Cdd:PRK12666 462 HERPVPRLRVLEL--APVAGLLAL------CVALTVFAGPV 494
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
79-433 |
1.04e-15 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 79.41 E-value: 1.04e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 79 FDIEPLGVVFAIVASALWPVTTIYAIGY----MRGH--NEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLST 152
Cdd:PRK08676 59 LFIDHLGIFVVLIASVVFILAALYARGYvdhlLSNGelDPENLKVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFS 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 153 YPLVTHAGTDAAKQGGRVYLGIlISTSIAFLLLAILGTWQVA------GTLDFTPGGVFANADGAPILGILLVLFCYGIG 226
Cdd:PRK08676 139 AMLIAILSARENIDAALKYIFI-ASTAMIFAFIGLIFLFSLTrqalgtGTLNWTELAAHASLLSPSVLGASFLFIFIGFL 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 227 -KAALMPFHRWLPAAMV-APTPVSALLHAVaVVKAGVFSVLKvviyIFGLEQLKEISLTDVMLYIAAT--TVLLSSCIAM 302
Cdd:PRK08676 218 aKSGLVPFHTWLPAAYAkAPSVVSALLSGT-VLNIGIYGILR----LSALLRQSGAAEQFSNVLIGLGifSIAVAAFSML 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 303 TKDNLKARLAYSTVSQLSYITVGALLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMG 382
Cdd:PRK08676 293 SQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAW 372
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1057059437 383 AFAIGAISIIGLPPMAGTWSKWYLTIGALDADKLVIVAVLMISSLLNIAYL 433
Cdd:PRK08676 373 GVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFA 423
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
16-399 |
1.14e-15 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 79.37 E-value: 1.14e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 16 IAIPLIGGVLV-LLTGKIPNLRE---AASLATAFILFTLVLEITQRIFAGEAMSTTWVELFPGIGLSFDIEPLGV-VFAI 90
Cdd:PRK07363 6 LWLPILGAIIIgFFPGNLPSARLrqiTLVFAVLVLAWSLFLLTQFDLSDPGMQFQEYLPWNEPLGLSYSLGVDGLsLPLL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 91 VASALWPVTTIYAIGYmrghnEENQTRFFFCFALAISSVMAICF-SGNLLTLFVFYEVLTLSTYPLVTHAGTDAAKQGGR 169
Cdd:PRK07363 86 VLNSLLTWIAIYSIGE-----NTERPRLYYSLILLINGGIAGALlAQNLLLFFLFYELELIPFYLLIAIWGGEKRGYASI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 170 VYLgILISTSIAFLLLAILGTWQVAGTLDFTPGGVFANADGAPILGILLVLFCYGIG-KAALMPFHRWLPAAMVAPTPVS 248
Cdd:PRK07363 161 KFL-IYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILLTGLLLGFGiKIPLVPLHTWLPDAYTEASPAV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 249 ALLHAVAVVKAGVFSVLKvviyiFGLEQLKEI--SLTDVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGA 326
Cdd:PRK07363 240 AILLGGVLAKLGTYGLLR-----FGLQLFPQTwsLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAA 314
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1057059437 327 LLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLG---RKMPLTMGAFAIGAISIIGLPPMAG 399
Cdd:PRK07363 315 AAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMnpiRGLPLTSALLVLAGMASAGIPGLVG 390
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
23-411 |
2.03e-15 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 78.59 E-value: 2.03e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 23 GVLVLLTGKIPNLREAASLATAFILFTLVLEITQRIFAGEAMSTTWVELfpgiglsfdiEPLGVVFAIVASALWPVTTIY 102
Cdd:PRK08168 19 GGLLLSRWLTRALWRIAQAASLAGLFLALLGLVLFATGAAWPAAAWLEV----------SGLGLVMAALVQLLGWVIGRF 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 103 AIGYMRGhnEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVT-HAGTDAAKQGGRVYLgILISTSIA 181
Cdd:PRK08168 89 SHRYLQG--EPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCfYPDRPFARLAAHKKF-IADRLAEL 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 182 FLLLAILGTWQVAGTLDFTPGGVFANADGA----PILGILLVLFCygIGKAALMPFHRWLPAAMVAPTPVSALLHAvAVV 257
Cdd:PRK08168 166 LLLAAAALAYLEVGSLSLSALWAHLAAQGAspslQAAALLLVLAV--ILKTAQLPVHGWLIQVMEAPTPVSALLHA-GVV 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 258 KAGVFSVLKVVIYifgLEQlkEISLTDVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALLASPIAAAga 337
Cdd:PRK08168 243 NLGGFVLIRFAPL---LEQ--APPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELAL-- 315
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1057059437 338 tMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTM-GAFAIGAISIIGLPPMAGTWSKWYLTIGAL 411
Cdd:PRK08168 316 -LHLVAHSLYKAHAFLSASEAVRDTRLRRLQGPQSAAGVVSLLLaPLLSAALVLLLQSLLPLGAWPWWWSAVLAL 389
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
113-442 |
8.14e-15 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 76.61 E-value: 8.14e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 113 ENQTRFFFCFALAISSVMAICF-SGNLLTLFVFYEVLTLSTYPLVthagtdaAKQGG--RVYLG--ILISTSIA--FLLL 185
Cdd:PRK12561 83 TRKPRLFYFLMLVLYSAQIGVFlAQDLLLFFLMWELELVPVYLLI-------SIWGGqkRLYAAtkFILYTALAsiFILV 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 186 AILGtwqvagtLDFTPGGVFAN--ADGAPILGILLVLFCY-----GIG-KAALMPFHRWLPAAM-VAPTPVSALLHAVaV 256
Cdd:PRK12561 156 AGLA-------LALSGDTFTFDlaELGAKSYPLALELLLYagfliAFGvKLPIFPLHTWLPDAHgEASAPVSMILAGV-L 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 257 VKAGVFSVLKvviyiFGLEQLKE--ISLTDVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALLASPIAA 334
Cdd:PRK12561 228 LKMGGYALIR-----FNVQMLPDahVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 335 AGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSKWYLTIGALDAD 414
Cdd:PRK12561 303 SGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVFLGITSSD 382
|
330 340 350
....*....|....*....|....*....|....
gi 1057059437 415 ------KLVIVAVLMISSLLNIAYLLPIPMKAFF 442
Cdd:PRK12561 383 vysstfRTITILLAAVGLILTPIYLLSMLRRVFY 416
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
116-436 |
8.58e-15 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 76.58 E-value: 8.58e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 116 TRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVTHAGTDA-AKQGGRVYLgILISTSIAFLLLAIL------ 188
Cdd:CHL00049 111 TEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDVrSNEATMKYL-LMGGASSSILVYGFSwlygls 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 189 -GTWQVAGTLDftpGGVFANADGAPILGILLVLFCYGIG-KAALMPFHRWLPAAMV-APTPVSALLHAVAVVKAgvfsvL 265
Cdd:CHL00049 190 gGEIELQEIVN---GLINTQMYNSPGISIALIFITVGIGfKLSLAPFHQWTPDVYEgSPTPVVAFLSVTSKVAA-----S 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 266 KVVIYIFGLEQLKEISLTDVMLYIAAT-TVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALLA-SPIAAAGATMHIAT 343
Cdd:CHL00049 262 ALATRIFDIPFYFSSNEWHLLLEILAIlSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGdSNDGYASMITYMLF 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 344 HAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSKWYLTIGALDADKLVIVAVLM 423
Cdd:CHL00049 342 YIFMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGL 421
|
330
....*....|...
gi 1057059437 424 ISSLLNIAYLLPI 436
Cdd:CHL00049 422 LTSVISIYYYLKI 434
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
101-329 |
1.28e-12 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 69.95 E-value: 1.28e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 101 IYAIGYMrgHNEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVTHAGTDAAKQGGrvyLGILISTSI 180
Cdd:MTH00095 63 VFSSYYM--NGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGA---MNTALTNRI 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 181 --AFLLLAILGtwqvagtldFTPGGVFANADGAPILGILLVLFCYGIGKAALMPFHRWLPAAMVAPTPVSALLHAVAVVK 258
Cdd:MTH00095 138 gdFFIFLFFSG---------FIFSSYYFFSFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVT 208
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1057059437 259 AGVFSVLKVVIYIFGLEQLKeisltdVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQL--SYITVGALLA 329
Cdd:MTH00095 209 AGLILLMNFSYLILNMNVMK------IMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMgfSMLTFGSGLS 275
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
78-432 |
1.22e-11 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 66.61 E-value: 1.22e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 78 SFDIEPLGVVF-AIVA-SALwpVTTIYAIGYMrghnEENQTRF--FFCFALAIS-SVMAICFSGNLLTLFVFYEVLTLST 152
Cdd:PRK02504 73 SFNADNLSIAFrAIIAlSTL--VTLLMSWRYV----EQSGTPLgeFAAILLTATlGGMFLSGATELVMIFISLETLSIAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 153 YPLVTHAGTDA-AKQGGRVYLGILISTSIAFLLLAILGTWQVAGTLDFTPGGVFANADGAPILGILLVLFCYGIG-KAAL 230
Cdd:PRK02504 147 YLLTGYMKRDPrSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGSTQLSAIALALITSPSLGLALALVFVIAGIAfKISA 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 231 MPFHRWLPAAMV-APTPVSALLhAVAVVKAGVFSVLKVVIYIFGL--EQLKEIsltdvMLYIAATTVLLSSCIAMTKDNL 307
Cdd:PRK02504 227 VPFHQWTPDVYEgSPTPVVAFL-SVGSKAAGFALAIRLLVTAFPSfdEQWKLL-----FTALAILSMVLGNVVALAQTSM 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 308 KARLAYSTVSQLSYITVGALLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIG 387
Cdd:PRK02504 301 KRMLAYSSIGQAGFVMIGLVAGTEAGYASMVFYLLAYLFMNLGAFACVILFSLRTGTDQISDYAGLYQKDPLLTLGLSLC 380
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1057059437 388 AISIIGLPPMAGTWSKWYLTIGALDADKLVIVAVLMISSLLNIAY 432
Cdd:PRK02504 381 LLSLGGIPPLAGFFGKIYLFWAGWQAGLYLLVLVGLVTSVISIYY 425
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
117-358 |
1.62e-11 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 66.21 E-value: 1.62e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 117 RFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVT------HAGTDAAKQGGRVYLGILISTSIAFLLLAIL-G 189
Cdd:PRK08601 103 RKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIglnkgwKVAREAAKISGMLFLISWLALALAIVWLFIAtG 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 190 TWQVAGTLDFTPggvFANADGAPILGILLVLFCYGIGKAALMPFHRWLPAAMVAPTPVSALLHAvAVVKAGvfsvlKVVI 269
Cdd:PRK08601 183 EWQLTSVLSNEN---LAQLGTWEKTGINLLLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHA-GLVNAG-----GIML 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 270 YIFGLEQLKEISLTdVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALLAspiAAAGATMHIATHAVGKI 349
Cdd:PRK08601 254 TRFSPLFHDDIAQI-LLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCALG---AYSAAIIHLILHGLFKA 329
|
....*....
gi 1057059437 350 TLFFCAGAI 358
Cdd:PRK08601 330 TLFLQSGSA 338
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
73-404 |
2.22e-11 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 66.00 E-value: 2.22e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 73 PGIGLSFDIEPLGVVFAIVASALWPVTTIYAIGYMR-GHNEENQTRFFFCFALAISSVMAicfsGNLLTLFVFYEVLTLS 151
Cdd:PRK08042 50 SLVSYDVQISPLNAIWLITLGLCGLFVSLFNIDWHRhAQVKANGLLINLLMAAAVCAVIA----SNLGMFVVMAEIMALC 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 152 TYPLVTHAgtdaakQGGRVYLGiLISTSIAFLLLAILGTWQVAGTLDFtpGGVFANADGAPILGILLVLFCYGIGK-AAL 230
Cdd:PRK08042 126 AVFLTGNS------KEGKLWFA-LGRLGTLLLAIACWLLWQRYGTLDL--RLLDMRMQQLPLGSDIWLLGVIGFGLlAGI 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 231 MPFHRWLPAAMV-APTPVSALLHAVaVVKAGVFSVLKVVIyifgLEQLKEISLTDVMLYIAATTVLLSSCIAMTKDNLKA 309
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALFSTV-VMKIGLLGILTLSL----LGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQR 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 310 RLAYSTVSQLSYITVG--------ALLASPIAAAGAT---MHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMP 378
Cdd:PRK08042 272 LLAYHTLENIGIILLGlgagvtgiALEQPALIALGLVgglYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMP 351
|
330 340
....*....|....*....|....*.
gi 1057059437 379 LTMGAFAIGAISIIGLPPMAGTWSKW 404
Cdd:PRK08042 352 VISIAMLVGLMAMAALPPLNGFAGEW 377
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
182-444 |
8.80e-10 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 60.88 E-value: 8.80e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 182 FLLLAILGTWQVAGTLDFTPGgVFANADGAPILGILL---VLFCYGIgKAALMPFHRWLPAAM-VAPTPVSALLhAVAVV 257
Cdd:PRK02546 180 FILLAALAMAFYGDTPTFDMT-ALAAKDFGLGFQLLCyagLLIAYGV-KLPIVPLHTWLPDAHgEATAPVHMLL-AGILL 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 258 KAGVFSVLKvviyiFGLEQLKE--ISLTDVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALLASPIAAA 335
Cdd:PRK02546 257 KMGGYALLR-----MNAGMLPDahAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTS 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 336 GATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSKWYLTIGALDAD- 414
Cdd:PRK02546 332 GAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATSDa 411
|
250 260 270
....*....|....*....|....*....|....*
gi 1057059437 415 -----KLVIVAVLMISSLLNIAYLLPIPMKAFFNQ 444
Cdd:PRK02546 412 ytlpfRVVVVFLAAVGVILTPIYLLSMLREIFFGP 446
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
111-322 |
6.99e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 54.79 E-value: 6.99e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 111 NEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLVTHAGTDAAKQGGRVYLgILISTSIAFLLLAILGT 190
Cdd:PRK06591 110 NNNRKSLFYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYL-IMGSIGATLILIAIGFL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 191 WQVAGTLDFTP-GGVFANADGAPILGILLVLFCYG-IGKAALMPFHRWLPAAMVAPTPVSALLHAVAVVKAGVFSVLKVV 268
Cdd:PRK06591 189 LSITGSLNMTDiAAYLQEHTNSRIITIAIGFFLIGaILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFT 268
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1057059437 269 IYIFGLEQLKeISLTDVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYI 322
Cdd:PRK06591 269 YIIIGYETIK-TAITNFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYV 321
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
65-396 |
8.99e-08 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 54.60 E-value: 8.99e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 65 STTWVELFPGIGLSFDIEPLGVVFAIVASALWPVTTIYAIGYMRGHNEENQtRFFFCFALAISSVMAICFSG-NLLTLFV 143
Cdd:MTH00044 43 NNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLASINHLSNNSPNNQ-RTFISLIIIILTALIITFSSlELILFYI 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 144 FYEVLTLSTYPLVTHAGTDAAKQGGRVYLGILISTSIAFLLLAILGTWQVAGTLDFTPGGVFANADGAPILGILLVLFCY 223
Cdd:MTH00044 122 AFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCI 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 224 gIGKAALMP---FHRWLPAAMV-APTPVSALLHAVaVVKAGVFSVLKVvIYIFGLEQLKEISLTDVMLYIAATtvLLSSC 299
Cdd:MTH00044 202 -LAFLVKMPiygFHLWLPKAHVeAPVAGSMILAAI-LLKLGGYGLIRL-INLFSLPSANNISFILIVFCCWGA--LITSI 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 300 IAMTKDNLKARLAYSTVSQLSYITVGALLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPL 379
Cdd:MTH00044 277 ICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPL 356
|
330
....*....|....*..
gi 1057059437 380 TMGAFAIGAISIIGLPP 396
Cdd:MTH00044 357 LPLWWLIFCAANLGLPP 373
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
128-453 |
1.05e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 53.88 E-value: 1.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 128 SVMAICFSGNLLTLFVFYEVLTLSTYPLVTHAGTDAAKQGGRVYLGILISTSIAFLLLAILGTWQVAGTLD-------FT 200
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHlsyinlvLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 201 PGGVFANAdGAPILGILLVLFCygIGKAALMPFHRWLPAAMV-APTPVSALLHAVAvvKAGVFSVLKvviyifgleqlkE 279
Cdd:MTH00196 85 SGQSFSSV-SVPIGYLLIIVAL--LFKLSVAPFHMWAPDVYEgAPTKTTALLAIVP--KLGIFSILV------------S 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 280 ISLTDVMLYIAATTVLLSSCI-AMTKDNLKARLAYSTVSQLSYITVGALLASPIAAAGATMHIATHAVGKITLFfcaGAI 358
Cdd:MTH00196 148 IGLNVNILLIGGLFSLFVGAIgALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF---SII 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 359 MVASHKKN-ISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSKWYLTIGALDADKLVIVAVLMISSLLNIAYLLPIp 437
Cdd:MTH00196 225 LALNVYKNlIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI- 303
|
330
....*....|....*.
gi 1057059437 438 MKAFFNQTDSASRPWT 453
Cdd:MTH00196 304 VKILFFQANSFLLIST 319
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
227-452 |
9.31e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 51.17 E-value: 9.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 227 KAALMPFHRWLPAAMV-APTPVSALLhaVAVVKAGVFSVLKVViyifGLEqlkeislTDVMLYIAATTVLLSSCIAMTKD 305
Cdd:MTH00199 203 KLSAAPFHMWAPDVYEgAPTITTALL--ATVPKIGVFSILVQI----GPV-------TNVVLICAVLSIIYGAIGALNQT 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 306 NLKARLAYSTVSQLSYITVGALLASPIAAAGATMHIATHAVGKITLFFCAgaIMVASHKKNISDMVGLGRKMPLTMGAFA 385
Cdd:MTH00199 270 KIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYMIIYVIMSICSFSII--LSLKLTKGLIVEVSGLSRKNPVIALTLA 347
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1057059437 386 IGAISIIGLPPMAGTWSKWYLTIGALDADKLVIVAVLMISSLLNIAYLLPIpMKAFFNQTDSASRPW 452
Cdd:MTH00199 348 LTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV-VQIIYFQADYSILIW 413
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
127-371 |
3.05e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 49.49 E-value: 3.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 127 SSVMAI-CFSGNLLTLFVFYEVLTLSTYPLVTHAGTDAAKQGGRVylgILISTSIAFLLLAILGTWQVAGTLDFTPGGVF 205
Cdd:MTH00063 86 VLVMGIlVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVV---TLVSSRFGDVCLFLLIGLSCWGGSGSFLCCLF 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 206 anadgapilgILLVLFCygigKAALMPFHRWLPAAMVAPTPVSALLHAVAVVKAGVFSVLK--VVIYIFGLeqlkeISLT 283
Cdd:MTH00063 163 ----------FFLIVFT----KSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRydYLLGFSWL-----SIFF 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 284 DVMLYIaatTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALLASPIAaagATMHIATHAVGKITLFFCAGAIMVASH 363
Cdd:MTH00063 224 SVLLLL---TIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVIL---SLFQLVSHGVSKCLLFMLVGDVMSGSG 297
|
....*...
gi 1057059437 364 KKNISDMV 371
Cdd:MTH00063 298 GSQSSNCV 305
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
77-434 |
4.12e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 49.17 E-value: 4.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 77 LSFDIEPLGVVFAIVASALWPVTTIYAIGYMRGHNEENQTRFFFCFALAISSVMAICFSGNLLTLFVFYEVLTLSTYPLV 156
Cdd:MTH00206 53 LYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLI 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 157 THAGTDAAK-QGGRVYLGILISTSIAfLLLAILGTWQVAGTLDFT---PGGVFANADGAPILGILLVLFCygigKAALMP 232
Cdd:MTH00206 133 TRWGNQKERlNAGYYFLFYTLIGSLP-LLIALLFLQNSLGSLSLYilyFSKLTTWNNNLWWLACILAFLV----KLPLYG 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 233 FHRWLPAAMV-APTPVSALLHAVaVVKAGVFSVLKVVIYIFGLeqLKEISLtdVMLYIAATTVLLSSCIAMTKDNLKARL 311
Cdd:MTH00206 208 VHLWLPKAHVeAPVAGSMVLAGV-LLKLGGYGMMRIILILGPS--TKLSSY--FFIILGLWGSIMTSSICLRQTDLKSLI 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 312 AYSTVSQLSYITVGALLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISI 391
Cdd:MTH00206 283 AYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLAN 362
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1057059437 392 IGLPPMAGTWSKWYLTIGALDADKLVIVaVLMISSLLNIAYLL 434
Cdd:MTH00206 363 LGLPPFPNLFGELLIITSLFSWSNFTLP-LLGLGFLFTAIYSL 404
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
113-397 |
1.19e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 47.64 E-value: 1.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 113 ENQTRFFFCFALAISSVMAICFSGNLLTLF-VFYEVLTLSTYPLVTHAGTDAAKQGGRVYLGILISTSIAFLLLAILGTW 191
Cdd:MTH00127 90 INRQRMYITLLTSLQIFLILAFGATEIIMFyVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 192 QVAGTLDF------TPGGVFANADGAPILGILLVLFCygigKAALMPFHRWLPAAMV-APTPVSALLHAVaVVKAGVFSV 264
Cdd:MTH00127 170 NSTGTLSMltlqysQPLQLSSWADKLWWAGCLLAFLV----KMPLYGVHLWLPKAHVeAPIAGSMVLAAV-LLKLGGYGM 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 265 LKVVIYIFGLEqlKEISLTDVMLyiAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALLASPIAAAGATMHIATH 344
Cdd:MTH00127 245 MRMMVMLDPLT--KELSYPFIIL--ALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1057059437 345 AVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPM 397
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPL 373
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
306-442 |
1.51e-05 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 47.25 E-value: 1.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 306 NLKARLAYSTVSQLSYITVGALLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNISDMVGLGRKMPLTMGAFA 385
Cdd:CHL00011 300 NLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFS 379
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1057059437 386 IGAISIIGLPPMAGTWSKWYLTIGALDAD------KLVIVAVLMISSLLNIAYLLPIPMKAFF 442
Cdd:CHL00011 380 SFSMASLALPGMSGFVAELIVFFGIITSQkyllmpKILITFVMAIGMILTPIYLLSMLRQMFY 442
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
227-436 |
4.14e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 45.54 E-value: 4.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 227 KAALMPFHRWLPAAMVAPTPVSALlhavavvkagVFSVLKVVIYIFGLEQLKEISLTDVMLYIAATTVLLSSCIAMTKDN 306
Cdd:MTH00011 101 KLGMAPCHFWFPSVMSSISWTLCL----------ILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMNQTQ 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 307 LKARLAYSTVSQLSYITVgallASPIAAAGATMHIATHAVGKITLFFcagaIMVASHKKNISDMVGLGRKMPLTMGAFAI 386
Cdd:MTH00011 171 LRPLLAYSSIGHMGWMTM----ISVFSPSMAILYFMTYIIITTPLML----LFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1057059437 387 GAISIIGLPPMAGTWSKWYLTIGALDADKLVIVAVLMISSLLNIAYLLPI 436
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNL 292
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
217-434 |
2.98e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 42.95 E-value: 2.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 217 LLVLFCYGIG-KAALMPFHRWLPAAMVAPTPVSALLhavavvkagVFSVLKVVIyIFGLEQLKEISLTDVMLY-IAATTV 294
Cdd:MTH00144 86 SMSLLLLGLClKLGLFPFHFWVPSVMAGLSWLSCFL---------LLTWQKVAP-LFLLSNFLDLYWLAYLLCvISVLSA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 295 LLSSCIAMTKDNLKARLAYSTVSQLSYITVGALLASPIAaagaTMHIATHAVGKITLFFCAGaimvashKKNISDMVGLG 374
Cdd:MTH00144 156 LVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLM----WMYFLIYIVSSGFLFFSLW-------SGDSGSMKDLG 224
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1057059437 375 RKMPLTMGAFAIGAI--SIIGLPPMAGTWSKWYLTIGALDADKLVIVAVLMISSLLNIAYLL 434
Cdd:MTH00144 225 SLKPSYKTGLSIISLllSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYL 286
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
114-434 |
4.31e-04 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 42.81 E-value: 4.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 114 NQTRFFFCF-ALAISSVMAICFS-GNLLTLFVFYEVLTLSTYPLVTHAGTDAAKQGGRVYLGILISTSIAFLLLAILGTW 191
Cdd:MTH00014 86 NKAPKTFMTnILILNLILLLTFSaSNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIF 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 192 QVAGTLDFtpggvFANADGAPIlgILLVLFCYGIGKAALM------PFHRWLPAAMV-APTPVSALLHAVaVVKAGVFSV 264
Cdd:MTH00014 166 YTNNSLSM-----LMSSMEPPS--IYLMNLWWLITILAFMvkmplyTVHLWLPKAHVeAPVAGSMILAGI-LLKLGGYGL 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 265 LKVViYIFgleQLKEISLTDVMLYIAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALLASPIAAAGATMHIATH 344
Cdd:MTH00014 238 LRMS-SLF---MHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAH 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 345 AVGKITLFFCAGAIMVASHKKNISDMVGLGRKMP-LTMGAFAIGAiSIIGLPPMAGTWSKWYLTIGALDADKLVIVaVLM 423
Cdd:MTH00014 314 GLCSSALFALANMTYETTHTRSLFLTKGLLSLFPtMTMWWFLLSA-ANMAAPPSINLLSEIMLLTSILSSSLSTAI-LLA 391
|
330
....*....|.
gi 1057059437 424 ISSLLNIAYLL 434
Cdd:MTH00014 392 ITSFLAAAYSL 402
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
64-408 |
5.68e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 42.60 E-value: 5.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 64 MSTTWVE-------LFPGIGLSFDIEPLGVVFAIVASALWPVTTIyaigyMRGHNEENQTRFFFCFALAISSVMAICFSg 136
Cdd:MTH00226 76 MDIDWIEgpekiipIIMGGPLVFAVDGISIYFIILTGFIVPCSIL-----ISWHSVKYLTKSFLICMLILEFLLYAVFS- 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 137 nLLTLFVFY---EVLTLSTYPLVTHAGTDAAKQGGRVYLGILISTSIAFLLLAILGTWQVAGTLDF-----TPGGVFANA 208
Cdd:MTH00226 150 -VLDIFMFYilfEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYltlasCSHVVSEQT 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 209 DGAPILGILLVLFCygigKAALMPFHRWLPAAMVAPTPVSALLHAVAVVKAGVFSVLKVVIYIFgleQLKEISLTDVMLY 288
Cdd:MTH00226 229 QKWIFLGIFLAMAV----KIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPIL---PLGAQNLAPAVIA 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 289 IAATTVLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALLASPIAAAGATMHIATHAVGKITLFFCAGAIMVASHKKNIS 368
Cdd:MTH00226 302 MGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIK 381
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1057059437 369 DMVGLGRKMPLTMGAFAIGAISIIGLPPmAGTWSKWYLTI 408
Cdd:MTH00226 382 YYRGLSITMPIWGTIMIVTSLANVAVPP-SGNFIGEYLSI 420
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
227-429 |
1.37e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 40.96 E-value: 1.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 227 KAALMPFHRWLPAAMVAPTPVSALLhavavvkagvfsvlkvviyIFGLEQLKEISL---------TDVMLYIAATTVLLS 297
Cdd:MTH00112 105 KLGLAPFHFWLPEVLQGSTTTTALI-------------------LSTWQKLAPLTLllmtsnslnPTLLLTLAILSTLIG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 298 SCIAMTKDNLKARLAYSTVSQLSYITVGALLASPIAaagaTMHIATHAVGKITLFFcagaIMVASHKKNISDMVGLGRKM 377
Cdd:MTH00112 166 GWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLT----LLTFYIYILMTTPMFL----TLNTTSTKTLKDMMTSWTKS 237
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1057059437 378 PLTMGAFAIGAISIIGLPPMAGTWSKWyLTIGALDADKLVIVAVLM-ISSLLN 429
Cdd:MTH00112 238 PTLNTTLMLTLLSLAGLPPLTGFMPKW-LILQELTKQNMTPTATIMaMLSLLS 289
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
118-443 |
1.51e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 40.81 E-value: 1.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 118 FFFCFALAISSVMAICfSGNLLTLFVFYEVLTLSTYPLVTHAGTDAAKQGGRVYLGILISTSIAFLllailgtwqVAGTL 197
Cdd:MTH00197 1 FLFLFIIFGGVLFSLS-SSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLL---------MGGSL 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 198 DFTPGGVFANADGAPILGILLvlfcygigKAALMPFHRWLPAAMVAPTPVSALLHAVavvkagvfsVLKVVIYIFgleqL 277
Cdd:MTH00197 71 SFSNLYLSLLSVVLVILGLLL--------KLGAFPFHFWVPSVMESLSWFNCFLLAT---------WQKLAPLLI----L 129
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 278 KEISLTDVMLYIAATT-VLLSSCIAMTKDNLKARLAYSTVSQLSYITVGALLASPIAaagaTMHIATHAVGKITLFFcag 356
Cdd:MTH00197 130 AFNSSSFMGLLICSVLsSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIF----MLYYLIYFVIMFMLFL--- 202
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 357 aIMVASHKKNISDMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSKWYLTIGALDADKLVIVAVLMISSLLNIAYLLPI 436
Cdd:MTH00197 203 -FLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSL 281
|
....*..
gi 1057059437 437 PMKAFFN 443
Cdd:MTH00197 282 AYKSLIL 288
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
227-434 |
6.32e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 39.07 E-value: 6.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 227 KAALMPFHRWLPAAMV-APTPVSALLHAVAvvkagvfsvlKVVIYIFgLEQLkeISLTDVMLYIAATTVLLSSCIAMTKD 305
Cdd:MTH00198 312 KLAAAPFHMWTPDVYEgAPTPTTALIAIIP----------KFTVYIL-LTSL--VITSKLLLSVAIISLVVGAFGALNQT 378
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 306 NLKARLAYSTVSQLSYITVGALLASPIAAAGATMHIATHAVGKITLF--FCA----GAIMVASHKKN-----------IS 368
Cdd:MTH00198 379 RIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALASFtvICTleefGTRTPTSRQRDgsfgnynlvrrLV 458
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1057059437 369 DMVGLGRKMPLTMGAFAIGAISIIGLPPMAGTWSKWYLTIGALDadklvivavLMISSLLNIAYLL 434
Cdd:MTH00198 459 DLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIK---------IAFSSSLSIYYLV 515
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
231-344 |
8.31e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 38.74 E-value: 8.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057059437 231 MP---FHRWLPAAMV-APTPVSALLHAVaVVKAGVFSVLKVVIYIfgLEQLKEISLTdvMLYIAATTVLLSSCIAMTKDN 306
Cdd:MTH00068 207 MPlygLHLWLPKAHVeAPIAGSMILAAV-LLKLGGYGILRISILL--TPLSKELSYP--FIILALWGVLMTSLICLRQTD 281
|
90 100 110
....*....|....*....|....*....|....*...
gi 1057059437 307 LKARLAYSTVSQLSYITVGALLASPIAAAGATMHIATH 344
Cdd:MTH00068 282 LKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
|
| |
