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Conserved domains on  [gi|1165754843|ref|WP_079935955|]
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MULTISPECIES: flagellar hook-basal body complex protein FliE [Geobacillus]

Protein Classification

flagellar hook-basal body complex protein FliE( domain architecture ID 10014068)

flagellar hook-basal body complex protein FliE which serves as a structural assembly platform for the rod, and may also serve as a regulator of flagellum-specific secretion

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
fliE PRK12728
flagellar hook-basal body protein FliE; Provisional
 1-98 1.21e-43

flagellar hook-basal body protein FliE; Provisional


:

Pssm-ID: 237183  Cd Length: 102  Bit Score: 137.01  E-value: 1.21e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165754843   1 MIDGASRIGLTMSSAVSPPAK---PAEAQKQFAAFFKEALNRVNEAQIQADALTEKLVRGENVQLHDVMIAAQKASIALQ 77
Cdd:PRK12728    2 MINEISPNQKVFDQNGSNKTNknnPAEAQKSFSDFLKEALNKVNELQVEADNSTEKLVKGEIVDLHDVMIAAQKASISLQ 81

                          90       100
                  ....*....|....*....|.
gi 1165754843  78 LTLEIRNKAIEAYQEMMRMPL 98
Cdd:PRK12728   82 LTVQIRNKVVEAYQEIMRMQL 102
 
Name Accession Description Interval E-value
fliE PRK12728
flagellar hook-basal body protein FliE; Provisional
 1-98 1.21e-43

flagellar hook-basal body protein FliE; Provisional


Pssm-ID: 237183  Cd Length: 102  Bit Score: 137.01  E-value: 1.21e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165754843   1 MIDGASRIGLTMSSAVSPPAK---PAEAQKQFAAFFKEALNRVNEAQIQADALTEKLVRGENVQLHDVMIAAQKASIALQ 77
Cdd:PRK12728    2 MINEISPNQKVFDQNGSNKTNknnPAEAQKSFSDFLKEALNKVNELQVEADNSTEKLVKGEIVDLHDVMIAAQKASISLQ 81

                          90       100
                  ....*....|....*....|.
gi 1165754843  78 LTLEIRNKAIEAYQEMMRMPL 98
Cdd:PRK12728   82 LTVQIRNKVVEAYQEIMRMQL 102
FliE pfam02049
Flagellar hook-basal body complex protein FliE;
11-98 1.74e-31

Flagellar hook-basal body complex protein FliE;


Pssm-ID: 460429  Cd Length: 89  Bit Score: 105.73  E-value: 1.74e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165754843 11 TMSSAVSPPAKPAEAQKQFAAFFKEALNRVNEAQIQADALTEKLVRGENVQLHDVMIAAQKASIALQLTLEIRNKAIEAY 90
Cdd:pfam02049  2 AAAGASAASAAAAAGGGSFASVLKDALDEVNQTQQEAEALAEAFATGEPVDLHDVMIAMQKASLSLQLTVQVRNKLVEAY 81


                 ....*...
gi 1165754843 91 QEMMRMPL 98
Cdd:pfam02049 82 QEIMRMQV 89
FliE COG1677
Flagellar hook-basal body complex protein FliE [Cell motility];
13-98 2.31e-29

Flagellar hook-basal body complex protein FliE [Cell motility];


Pssm-ID: 441283  Cd Length: 105  Bit Score: 100.81  E-value: 2.31e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165754843  13 SSAVSPPAKPAEAQKQFAAFFKEALNRVNEAQIQADALTEKLVRGENVQLHDVMIAAQKASIALQLTLEIRNKAIEAYQE 92
Cdd:COG1677    20 AAPSAAAAAPAAGGASFGDVLKDALDDVNQTQQEAEALAQAFATGKSVDLHDVMIAMQKASLSLQLTVQVRNKLVEAYQE 99


                  ....*.
gi 1165754843  93 MMRMPL 98
Cdd:COG1677   100 IMRMQV 105
fliE TIGR00205
flagellar hook-basal body complex protein FliE; fliE is a component of the flagellar ...
 29-96 1.07e-18

flagellar hook-basal body complex protein FliE; fliE is a component of the flagellar hook-basal body complex located possibly at (MS-ring)-rod junction. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 272960  Cd Length: 108  Bit Score: 74.20  E-value: 1.07e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1165754843  29 FAAFFKEALNRVNEAQIQADALTEKLVRGE-NVQLHDVMIAAQKASIALQLTLEIRNKAIEAYQEMMRM 96
Cdd:TIGR00205  39 FSDLLKNSITDLNKTQLASDKVTEQAALGPsSVDLHDVMIAMQKASMSMSILKEVRNKAVKAYQEIMRM 107
 
Name Accession Description Interval E-value
fliE PRK12728
flagellar hook-basal body protein FliE; Provisional
 1-98 1.21e-43

flagellar hook-basal body protein FliE; Provisional


Pssm-ID: 237183  Cd Length: 102  Bit Score: 137.01  E-value: 1.21e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165754843   1 MIDGASRIGLTMSSAVSPPAK---PAEAQKQFAAFFKEALNRVNEAQIQADALTEKLVRGENVQLHDVMIAAQKASIALQ 77
Cdd:PRK12728    2 MINEISPNQKVFDQNGSNKTNknnPAEAQKSFSDFLKEALNKVNELQVEADNSTEKLVKGEIVDLHDVMIAAQKASISLQ 81

                          90       100
                  ....*....|....*....|.
gi 1165754843  78 LTLEIRNKAIEAYQEMMRMPL 98
Cdd:PRK12728   82 LTVQIRNKVVEAYQEIMRMQL 102
FliE pfam02049
Flagellar hook-basal body complex protein FliE;
11-98 1.74e-31

Flagellar hook-basal body complex protein FliE;


Pssm-ID: 460429  Cd Length: 89  Bit Score: 105.73  E-value: 1.74e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165754843 11 TMSSAVSPPAKPAEAQKQFAAFFKEALNRVNEAQIQADALTEKLVRGENVQLHDVMIAAQKASIALQLTLEIRNKAIEAY 90
Cdd:pfam02049  2 AAAGASAASAAAAAGGGSFASVLKDALDEVNQTQQEAEALAEAFATGEPVDLHDVMIAMQKASLSLQLTVQVRNKLVEAY 81


                 ....*...
gi 1165754843 91 QEMMRMPL 98
Cdd:pfam02049 82 QEIMRMQV 89
FliE COG1677
Flagellar hook-basal body complex protein FliE [Cell motility];
13-98 2.31e-29

Flagellar hook-basal body complex protein FliE [Cell motility];


Pssm-ID: 441283  Cd Length: 105  Bit Score: 100.81  E-value: 2.31e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165754843  13 SSAVSPPAKPAEAQKQFAAFFKEALNRVNEAQIQADALTEKLVRGENVQLHDVMIAAQKASIALQLTLEIRNKAIEAYQE 92
Cdd:COG1677    20 AAPSAAAAAPAAGGASFGDVLKDALDDVNQTQQEAEALAQAFATGKSVDLHDVMIAMQKASLSLQLTVQVRNKLVEAYQE 99


                  ....*.
gi 1165754843  93 MMRMPL 98
Cdd:COG1677   100 IMRMQV 105
fliE PRK00253
flagellar hook-basal body protein FliE; Reviewed
 13-97 3.14e-23

flagellar hook-basal body protein FliE; Reviewed


Pssm-ID: 178948  Cd Length: 108  Bit Score: 85.39  E-value: 3.14e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165754843  13 SSAVSPPAKPAEAQKQFAAFFKEALNRVNEAQIQADALTEKLVRGEN-VQLHDVMIAAQKASIALQLTLEIRNKAIEAYQ 91
Cdd:PRK00253   22 SGQAKPAQGAAVGTADFAGQLKAALDKVNDTQQAARTLAEKFELGDPgVSLNDVMIALQKASVSFQAGIQVRNKLVAAYQ 101


                  ....*.
gi 1165754843  92 EMMRMP 97
Cdd:PRK00253  102 EIMNMQ 107
fliE TIGR00205
flagellar hook-basal body complex protein FliE; fliE is a component of the flagellar ...
 29-96 1.07e-18

flagellar hook-basal body complex protein FliE; fliE is a component of the flagellar hook-basal body complex located possibly at (MS-ring)-rod junction. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 272960  Cd Length: 108  Bit Score: 74.20  E-value: 1.07e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1165754843  29 FAAFFKEALNRVNEAQIQADALTEKLVRGE-NVQLHDVMIAAQKASIALQLTLEIRNKAIEAYQEMMRM 96
Cdd:TIGR00205  39 FSDLLKNSITDLNKTQLASDKVTEQAALGPsSVDLHDVMIAMQKASMSMSILKEVRNKAVKAYQEIMRM 107
fliE PRK12729
flagellar hook-basal body protein FliE; Provisional
 16-93 1.49e-17

flagellar hook-basal body protein FliE; Provisional


Pssm-ID: 183707  Cd Length: 127  Bit Score: 71.61  E-value: 1.49e-17
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1165754843  16 VSPPAKPAEAQKQFAAFFKEALNRVNEAQIQADALTEKLVRGEN-VQLHDVMIAAQKASIALQLTLEIRNKAIEAYQEM 93
Cdd:PRK12729   45 VKQPVSPDYVAESFSEAMKNALTSVNDLQVEADELTQKMVFDPNsVDAHDVMIASEKARVALTFTKTIADGVVRAYREL 123
fliE PRK03907
flagellar hook-basal body complex protein FliE;
1-95 1.26e-13

flagellar hook-basal body complex protein FliE;


Pssm-ID: 235173  Cd Length: 97  Bit Score: 60.63  E-value: 1.26e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165754843  1 MIDGASRIGLTMSSAVSPPAKPAEAqKQFAAFFKEALNRVNEAQIQADALTEKLVRGENVQLHDVMIAAQKASIALQLTL 80
Cdd:PRK03907   1 PFNNLNTDNRTKNEESGSTFKEQKG-GEFSKLLKQSINELNKTQEQSEKALADIATGQVKDLHQAAIAIGKAETSMKLML 79

                         90
                 ....*....|....*
gi 1165754843 81 EIRNKAIEAYQEMMR 95
Cdd:PRK03907  80 EVRNKAISAYKEILR 94
fliE PRK00732
flagellar hook-basal body complex protein FliE;
29-98 2.11e-07

flagellar hook-basal body complex protein FliE;


Pssm-ID: 179101  Cd Length: 102  Bit Score: 44.74  E-value: 2.11e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165754843  29 FAAFFKEALNRVNEAQIQADALTEKLVRGEnVQLHDVMIAAQKASIALQLTLEIRNKAIEAYQEMMRMPL 98
Cdd:PRK00732   34 FGALLKDAMGSVLEAGRKSDAQTAAMASGK-ANLMDVVTAVAETDVAVSTLVSVRDRVIQAYEEIMRMPI 102
fliE PRK01482
flagellar hook-basal body complex protein FliE;
27-93 3.54e-06

flagellar hook-basal body complex protein FliE;


Pssm-ID: 134562  Cd Length: 108  Bit Score: 41.72  E-value: 3.54e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1165754843  27 KQFAAFFKEALNRVNEAQIQADALTEK-LVRGENVQLHDVMIAAQKASIALQLTLEIRNKAIEAYQEM 93
Cdd:PRK01482   37 KTFKDTLLNAIDDVNNSQLNVSKVTEQaILDPESVDVHDVTIAMAKANMNLSIAKAVVERSIKAYQDI 104
fliE PRK00790
flagellar hook-basal body complex protein FliE;
4-97 3.84e-04

flagellar hook-basal body complex protein FliE;


Pssm-ID: 179126  Cd Length: 109  Bit Score: 36.56  E-value: 3.84e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165754843   4 GASRIGLTMSSAVSPPAKPAEAQKQFAAFFKEALNRVNEAQIQADALTEKLVRGEnVQLHDVMIAAQKASIALQLTLEIR 83
Cdd:PRK00790   16 ALSETVAEKSAAAAPAAAPAAPGASFASVLGQMAGDAVQTLKAAEATSIQAIKGK-ADTREVVDAVMQAEQALQTAVAIR 94

                          90
                  ....*....|....
gi 1165754843  84 NKAIEAYQEMMRMP 97
Cdd:PRK00790   95 DKVVEAYLEILRMP 108
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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