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MULTISPECIES: FliM/FliN family flagellar motor switch protein [Lelliottia]
flagellar motor switch protein FliM( domain architecture ID 1005727)
flagellar motor switch protein FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring) located at the base of the basal body
List of domain hits
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Name | Accession | Description | Interval | E-value | |||
FliM super family | cl34368 | Flagellar motor switch protein FliM [Cell motility]; |
191-269 | 2.82e-06 | |||
Flagellar motor switch protein FliM [Cell motility]; The actual alignment was detected with superfamily member COG1868: Pssm-ID: 441473 [Multi-domain] Cd Length: 326 Bit Score: 47.85 E-value: 2.82e-06
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Name | Accession | Description | Interval | E-value | |||
FliM | COG1868 | Flagellar motor switch protein FliM [Cell motility]; |
191-269 | 2.82e-06 | |||
Flagellar motor switch protein FliM [Cell motility]; Pssm-ID: 441473 [Multi-domain] Cd Length: 326 Bit Score: 47.85 E-value: 2.82e-06
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FliMN_C | pfam01052 | Type III flagellar switch regulator (C-ring) FliN C-term; This family includes the C-terminal ... |
224-267 | 2.26e-05 | |||
Type III flagellar switch regulator (C-ring) FliN C-term; This family includes the C-terminal region of flagellar motor switch proteins FliN and FliM. It is associated with family FliM, pfam02154 and family FliN_N pfam16973. Pssm-ID: 460043 [Multi-domain] Cd Length: 66 Bit Score: 41.56 E-value: 2.26e-05
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fliM | PRK06666 | flagellar motor switch protein FliM; Validated |
223-269 | 2.60e-03 | |||
flagellar motor switch protein FliM; Validated Pssm-ID: 235849 [Multi-domain] Cd Length: 337 Bit Score: 38.67 E-value: 2.60e-03
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SpaO_YscQ | TIGR02551 | type III secretion system apparatus protein YscQ/HrcQ; Genes in this family are found in type ... |
222-261 | 9.27e-03 | |||
type III secretion system apparatus protein YscQ/HrcQ; Genes in this family are found in type III secretion operons. The gene (YscQ) in Yersinia is essential for YOPs secretion, while SpaO in Shigella is involved in the Surface Presentation of Antigens apparatus found on the virulence plasmid, and HrcQ is involved in the Harpin secretory system in organisms like Pseudomonas syringae. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis] Pssm-ID: 274196 [Multi-domain] Cd Length: 298 Bit Score: 37.00 E-value: 9.27e-03
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Name | Accession | Description | Interval | E-value | |||
FliM | COG1868 | Flagellar motor switch protein FliM [Cell motility]; |
191-269 | 2.82e-06 | |||
Flagellar motor switch protein FliM [Cell motility]; Pssm-ID: 441473 [Multi-domain] Cd Length: 326 Bit Score: 47.85 E-value: 2.82e-06
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FliMN_C | pfam01052 | Type III flagellar switch regulator (C-ring) FliN C-term; This family includes the C-terminal ... |
224-267 | 2.26e-05 | |||
Type III flagellar switch regulator (C-ring) FliN C-term; This family includes the C-terminal region of flagellar motor switch proteins FliN and FliM. It is associated with family FliM, pfam02154 and family FliN_N pfam16973. Pssm-ID: 460043 [Multi-domain] Cd Length: 66 Bit Score: 41.56 E-value: 2.26e-05
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FliN | COG1886 | Flagellar motor switch/type III secretory pathway protein FliN [Cell motility, Intracellular ... |
201-262 | 5.02e-05 | |||
Flagellar motor switch/type III secretory pathway protein FliN [Cell motility, Intracellular trafficking, secretion, and vesicular transport]; Pssm-ID: 441490 [Multi-domain] Cd Length: 172 Bit Score: 43.07 E-value: 5.02e-05
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fliM | PRK06666 | flagellar motor switch protein FliM; Validated |
223-269 | 2.60e-03 | |||
flagellar motor switch protein FliM; Validated Pssm-ID: 235849 [Multi-domain] Cd Length: 337 Bit Score: 38.67 E-value: 2.60e-03
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SpaO_YscQ | TIGR02551 | type III secretion system apparatus protein YscQ/HrcQ; Genes in this family are found in type ... |
222-261 | 9.27e-03 | |||
type III secretion system apparatus protein YscQ/HrcQ; Genes in this family are found in type III secretion operons. The gene (YscQ) in Yersinia is essential for YOPs secretion, while SpaO in Shigella is involved in the Surface Presentation of Antigens apparatus found on the virulence plasmid, and HrcQ is involved in the Harpin secretory system in organisms like Pseudomonas syringae. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis] Pssm-ID: 274196 [Multi-domain] Cd Length: 298 Bit Score: 37.00 E-value: 9.27e-03
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Blast search parameters | ||||
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