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Conserved domains on  [gi|1328111517|ref|WP_102221665|]
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cation:proton antiporter subunit C [Fischerella thermalis]

Protein Classification

cation:proton antiporter subunit C( domain architecture ID 10012918)

cation:proton antiporter subunit C may be part of a cation efflux system which is required for the adaptation to alkaline pH, similar to Methanocaldococcus jannaschii protein MJ1310

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK07375 PRK07375
Na+/H+ antiporter subunit C;
1-109 2.18e-45

Na+/H+ antiporter subunit C;


:

Pssm-ID: 236004  Cd Length: 112  Bit Score: 142.33  E-value: 2.18e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1328111517   1 MLEACIFATILCGFFGIILKKNLVMKIISMDVMSTGVIAYYVLIASRDGLFTPIFSEVKNVAYSDPVPQAVILTAIVIGF 80
Cdd:PRK07375    4 MIYALAIALLVIGLYGLIFKRNLLKKIIGLDVFQTGVNLFYIAIGYRSGGGVPILSPSGFTTYADPLPQALVLTAIVIGF 83

                          90       100
                  ....*....|....*....|....*....
gi 1328111517  81 SIQALMLVGVMKLARDNPTLESNEIEKNN 109
Cdd:PRK07375   84 ATTAVMLALIVKLYKDYGTLSESEIEKED 112
 
Name Accession Description Interval E-value
PRK07375 PRK07375
Na+/H+ antiporter subunit C;
1-109 2.18e-45

Na+/H+ antiporter subunit C;


Pssm-ID: 236004  Cd Length: 112  Bit Score: 142.33  E-value: 2.18e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1328111517   1 MLEACIFATILCGFFGIILKKNLVMKIISMDVMSTGVIAYYVLIASRDGLFTPIFSEVKNVAYSDPVPQAVILTAIVIGF 80
Cdd:PRK07375    4 MIYALAIALLVIGLYGLIFKRNLLKKIIGLDVFQTGVNLFYIAIGYRSGGGVPILSPSGFTTYADPLPQALVLTAIVIGF 83

                          90       100
                  ....*....|....*....|....*....
gi 1328111517  81 SIQALMLVGVMKLARDNPTLESNEIEKNN 109
Cdd:PRK07375   84 ATTAVMLALIVKLYKDYGTLSESEIEKED 112
MnhC COG1006
Multisubunit Na+/H+ antiporter, MnhC subunit [Inorganic ion transport and metabolism];
1-107 8.91e-32

Multisubunit Na+/H+ antiporter, MnhC subunit [Inorganic ion transport and metabolism];


Pssm-ID: 440630  Cd Length: 113  Bit Score: 107.89  E-value: 8.91e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1328111517   1 MLEACIFATILCGFFgIILKKNLVMKIISMDVMSTGVIAYYVLIASRDGLFTPIFSEVKNVA-YSDPVPQAVILTAIVIG 79
Cdd:COG1006     4 LLALVIGVLFAIGVY-LLLRRNLIKVIIGLSLLSNAVNLLLFAMGGLTGGAPPILGEGPPAApYADPLPQALVLTAIVIG 82

                          90       100
                  ....*....|....*....|....*...
gi 1328111517  80 FSIQALMLVGVMKLARDNPTLESNEIEK 107
Cdd:COG1006    83 FAVTAFLLALAYRIYQLYGTDDVDELRE 110
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
1-105 3.60e-17

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 70.29  E-value: 3.60e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1328111517   1 MLEACIFATILCGFFGIILKKNLVMKIISMDVMSTGVIAYYVLIASRdglftpifsevknvaYSDPVPQAVILTAIVIGF 80
Cdd:pfam00420   1 AYLLLSGLLFLIGLYGLLLRRNLLRVLLSLELMLNAVNLALVLFGRL---------------TADPLPQALILTAIVIAA 65

                          90       100
                  ....*....|....*....|....*
gi 1328111517  81 SIQALMLVGVMKLARDNPTLESNEI 105
Cdd:pfam00420  66 AEAAVGLALLVRIYRTHGTDDVDSL 90
2a6301s03 TIGR00941
Multicomponent Na+:H+ antiporter, MnhC subunit; [Transport and binding proteins, Cations and ...
 17-88 9.18e-06

Multicomponent Na+:H+ antiporter, MnhC subunit; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273354  Cd Length: 104  Bit Score: 40.95  E-value: 9.18e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1328111517  17 IILKKNLVMKIISMDVMSTGVIAYYVLIASRDGLFTPIFsEVKNVAYSDPVPQAVILTAIVIGFSIQALMLV 88
Cdd:TIGR00941  19 LLLSRSVVRVVLGLALLGYAVNLFILTMGGLENKAPPIL-TLPVGPYVDPLPQALILTAIVIGFATTALFLV 89
 
Name Accession Description Interval E-value
PRK07375 PRK07375
Na+/H+ antiporter subunit C;
1-109 2.18e-45

Na+/H+ antiporter subunit C;


Pssm-ID: 236004  Cd Length: 112  Bit Score: 142.33  E-value: 2.18e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1328111517   1 MLEACIFATILCGFFGIILKKNLVMKIISMDVMSTGVIAYYVLIASRDGLFTPIFSEVKNVAYSDPVPQAVILTAIVIGF 80
Cdd:PRK07375    4 MIYALAIALLVIGLYGLIFKRNLLKKIIGLDVFQTGVNLFYIAIGYRSGGGVPILSPSGFTTYADPLPQALVLTAIVIGF 83

                          90       100
                  ....*....|....*....|....*....
gi 1328111517  81 SIQALMLVGVMKLARDNPTLESNEIEKNN 109
Cdd:PRK07375   84 ATTAVMLALIVKLYKDYGTLSESEIEKED 112
PRK08389 PRK08389
putative monovalent cation/H+ antiporter subunit C; Reviewed
 1-110 4.09e-44

putative monovalent cation/H+ antiporter subunit C; Reviewed


Pssm-ID: 236258  Cd Length: 114  Bit Score: 139.10  E-value: 4.09e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1328111517   1 MLEACIF---ATILCGFFGIILKKNLVMKIISMDVMSTGVIAYYVLIASRDGLFTPIFSE-VKNVAYSDPVPQAVILTAI 76
Cdd:PRK08389    1 MIEAYYFgaiALVLIGLYGVLVKKNLLKIIIGLDIMETGVNLLLISIGYVSGRSAPILSEgITPSNYVDPIPQALVLTAI 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1328111517  77 VIGFSIQALMLVGVMKLARDNPTLESNEIEKNNT 110
Cdd:PRK08389   81 VIGVSTTALALSVAIKLYEKYGTLNVEEIRRLRG 114
MnhC COG1006
Multisubunit Na+/H+ antiporter, MnhC subunit [Inorganic ion transport and metabolism];
1-107 8.91e-32

Multisubunit Na+/H+ antiporter, MnhC subunit [Inorganic ion transport and metabolism];


Pssm-ID: 440630  Cd Length: 113  Bit Score: 107.89  E-value: 8.91e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1328111517   1 MLEACIFATILCGFFgIILKKNLVMKIISMDVMSTGVIAYYVLIASRDGLFTPIFSEVKNVA-YSDPVPQAVILTAIVIG 79
Cdd:COG1006     4 LLALVIGVLFAIGVY-LLLRRNLIKVIIGLSLLSNAVNLLLFAMGGLTGGAPPILGEGPPAApYADPLPQALVLTAIVIG 82

                          90       100
                  ....*....|....*....|....*...
gi 1328111517  80 FSIQALMLVGVMKLARDNPTLESNEIEK 107
Cdd:COG1006    83 FAVTAFLLALAYRIYQLYGTDDVDELRE 110
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
1-105 3.60e-17

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 70.29  E-value: 3.60e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1328111517   1 MLEACIFATILCGFFGIILKKNLVMKIISMDVMSTGVIAYYVLIASRdglftpifsevknvaYSDPVPQAVILTAIVIGF 80
Cdd:pfam00420   1 AYLLLSGLLFLIGLYGLLLRRNLLRVLLSLELMLNAVNLALVLFGRL---------------TADPLPQALILTAIVIAA 65

                          90       100
                  ....*....|....*....|....*
gi 1328111517  81 SIQALMLVGVMKLARDNPTLESNEI 105
Cdd:pfam00420  66 AEAAVGLALLVRIYRTHGTDDVDSL 90
PRK09094 PRK09094
putative monovalent cation/H+ antiporter subunit C; Reviewed
 61-88 5.46e-08

putative monovalent cation/H+ antiporter subunit C; Reviewed


Pssm-ID: 236377  Cd Length: 114  Bit Score: 47.18  E-value: 5.46e-08
                          10        20
                  ....*....|....*....|....*...
gi 1328111517  61 VAYSDPVPQAVILTAIVIGFSIQALMLV 88
Cdd:PRK09094   66 ANYTDPLPQALVLTAIVIGFAMTALFLV 93
PRK12659 PRK12659
Na+/H+ antiporter subunit C;
51-88 7.29e-08

Na+/H+ antiporter subunit C;


Pssm-ID: 183659  Cd Length: 117  Bit Score: 46.96  E-value: 7.29e-08
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1328111517  51 FTPIFSEVKNVAYSDPVPQAVILTAIVIGFSIQALMLV 88
Cdd:PRK12659   56 LVPEGATAPAGPVADPLPQALILTAIVIGFGVQAFAIV 93
PRK08600 PRK08600
putative monovalent cation/H+ antiporter subunit C; Reviewed
 17-88 1.53e-07

putative monovalent cation/H+ antiporter subunit C; Reviewed


Pssm-ID: 181497  Cd Length: 113  Bit Score: 45.72  E-value: 1.53e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1328111517  17 IILKKNLVMKIISMDVMSTGViayYVLIASRDGLFT---PIFSEvKNVAYSDPVPQAVILTAIVIGFSIQALMLV 88
Cdd:PRK08600   19 LILSKSLLRIIIGTTLLSHGA---NLLLLTMGGLKKgavPILGE-GVTSYVDPLPQALILTAIVISFGVTAFFLV 89
PRK12660 PRK12660
putative monovalent cation/H+ antiporter subunit C; Reviewed
 17-105 3.11e-07

putative monovalent cation/H+ antiporter subunit C; Reviewed


Pssm-ID: 183660  Cd Length: 114  Bit Score: 45.11  E-value: 3.11e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1328111517  17 IILKKNLVMKIISMDVMSTGViayYVLIASRDGL----FTPIFSEvKNVAYSDPVPQAVILTAIVIGFSIQALMLVGVMK 92
Cdd:PRK12660   19 MILSINLIRIVIGISIYTHAG---NLIIMSMGGYgssrSEPLITG-GNQLFVDPLLQAIVLTAIVIGFGMTAFLLVLVYR 94

                          90
                  ....*....|...
gi 1328111517  93 LARDNPTLESNEI 105
Cdd:PRK12660   95 TYKVTKEDEIEGL 107
PRK12658 PRK12658
Na+/H+ antiporter subunit C;
51-105 4.31e-07

Na+/H+ antiporter subunit C;


Pssm-ID: 183658  Cd Length: 125  Bit Score: 45.05  E-value: 4.31e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1328111517  51 FTPIFSEVKNVAYSDPVPQAVILTAIVIGFSIQALMLVGVMKLARDNPTLESNEI 105
Cdd:PRK12658   56 LIPAGADVLAEGAANPLPQALILTAIVIGFGLLAFLLVLAYRAYQDLGTDDTDEM 110
2a6301s03 TIGR00941
Multicomponent Na+:H+ antiporter, MnhC subunit; [Transport and binding proteins, Cations and ...
 17-88 9.18e-06

Multicomponent Na+:H+ antiporter, MnhC subunit; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273354  Cd Length: 104  Bit Score: 40.95  E-value: 9.18e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1328111517  17 IILKKNLVMKIISMDVMSTGVIAYYVLIASRDGLFTPIFsEVKNVAYSDPVPQAVILTAIVIGFSIQALMLV 88
Cdd:TIGR00941  19 LLLSRSVVRVVLGLALLGYAVNLFILTMGGLENKAPPIL-TLPVGPYVDPLPQALILTAIVIGFATTALFLV 89
PRK08388 PRK08388
putative monovalent cation/H+ antiporter subunit C; Reviewed
 7-107 2.33e-05

putative monovalent cation/H+ antiporter subunit C; Reviewed


Pssm-ID: 236257  Cd Length: 119  Bit Score: 40.27  E-value: 2.33e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1328111517   7 FATILCGFFGIILKKNLVMKIISMDVMSTGVIAYYVLIASR--DGLFT--PIFS--EVKNVAYSDPVPQAVILTAIVIGF 80
Cdd:PRK08388   10 FLMIALGIYAFLYKRNLIKLILALDLIDSGIHLLLISLGYRmeNGLPPtaPIYTgyETLKSPMVGPIPQALVLTSIVIGV 89

                          90       100
                  ....*....|....*....|....*..
gi 1328111517  81 SIQALMLVGVMKLARDNPTLESNEIEK 107
Cdd:PRK08388   90 CVLSLAMALTINAYRHYGTLDVTKLRR 116
PRK12661 PRK12661
putative monovalent cation/H+ antiporter subunit C; Reviewed
 48-88 8.55e-05

putative monovalent cation/H+ antiporter subunit C; Reviewed


Pssm-ID: 237162  Cd Length: 140  Bit Score: 38.99  E-value: 8.55e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 1328111517  48 DGLFTPIFSEVKNVAYSDPVPQAVILTAIVIGFSIQALMLV 88
Cdd:PRK12661   78 SGILAPIVTNGPETEFVDPLVQALVLTAIVIGLATTAFILI 118
PRK07946 PRK07946
putative monovalent cation/H+ antiporter subunit C; Reviewed
 65-87 3.11e-04

putative monovalent cation/H+ antiporter subunit C; Reviewed


Pssm-ID: 236136  Cd Length: 163  Bit Score: 37.72  E-value: 3.11e-04
                          10        20
                  ....*....|....*....|...
gi 1328111517  65 DPVPQAVILTAIVIGFSIQALML 87
Cdd:PRK07946   70 DPLAQAMILTAIVITMGITAFVL 92
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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