|
Name |
Accession |
Description |
Interval |
E-value |
| CusA |
COG3696 |
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism]; |
1-1021 |
0e+00 |
|
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism];
Pssm-ID: 442911 [Multi-domain] Cd Length: 1031 Bit Score: 1482.20 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 1 MINWIVSFAVKRRMMVLALTFLFAGFGVYNIQNLAVDAVPDITNVQVQINSKAPGFTPLEVEQRITYLVETAMAGIPKLD 80
Cdd:COG3696 1 MLNRIIRFSLRNRLLVLLLTLLLAAAGIYSLRRLPIDAFPDITNVQVQVITEAPGLSPEEVEQQVTYPIETALNGLPGVK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 81 YTRSLSRYGLSQVTIIFDEGTDIYWARQQIGERIQSIRADLPNNVEPNLGPIASGLGEIFTYsvhakpdALKSDGMPYSA 160
Cdd:COG3696 81 EVRSISRFGLSVVTVIFEDGTDIYWARQLVLERLQQVREQLPAGVTPELGPISTGLGEIYQY-------TLESDPGKYSL 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 161 EDLRTLQDWVIRPQLLKVKGVTEINSQGGFERQYQVAPIPEKLIAYKLTIKDVITALELNNSNRGAGYIERFDGQYLVRS 240
Cdd:COG3696 154 MELRTLQDWVIRPQLRSVPGVAEVNSFGGFVKQYQVLVDPAKLRAYGLTLDDVIEALERNNANVGGGYIERGGQEYLVRG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 241 PGQLKTLADIANTVIAKRDDAPVRIKDVANVYLGKELRTGAATYNGE-ETVLGTAMMLIGENSRVVAKAMADKLIQVQKS 319
Cdd:COG3696 234 IGLIRSLEDIENIVVKTRNGTPVLLRDVAEVRIGPAPRRGAATLNGEgEVVGGIVLMLKGENALEVIEAVKAKLAELKPS 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 320 LPAGVIVEPVYDRTNLVDKTIATVQKNLFEGAVLVIVILLLLLGNITGALITAMVIPLSMLFAITGMVGNRVSGNLMSLG 399
Cdd:COG3696 314 LPEGVKIVPFYDRSDLIDRAIHTVTKNLLEGALLVILVLFLFLGNLRAALIVALAIPLSLLFAFIVMRLFGISANLMSLG 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 400 --AIDFGLIVDGAVIVVENCLRQLGMAQHKHGRLltlsERLEVVTSATKEVFSPAVFGILIIMLVYLPLFALSGVEGKMF 477
Cdd:COG3696 394 glAIDFGIIVDGAVVMVENILRRLEENRAAGTPR----ERLEVVLEAAREVRRPIFFATLIIILVFLPIFTLEGVEGKLF 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 478 QPMAFTVVAALIGALIFAVTFVPAAIAVFVRGKVDESENAVMRGVKKIYKPLLNLSLKLPWLMISIATVLVLVLGFKVKN 557
Cdd:COG3696 470 RPMALTVIFALLGALLLSLTLVPVLASLLLRGKVPEKENPLVRWLKRLYRPLLRWALRHPKLVLAVALVLLVLALALFPR 549
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 558 MGAEFLPQLDEGDIAMHALRITGTGIEQSVQMQKQLEQALLAQPEIANVFSKIGTADVASDPMPPNVADTFLMLKPRAQW 637
Cdd:COG3696 550 LGSEFLPELDEGDLLVMATLPPGISLEESVELGQQVERILKSFPEVESVVSRTGRAEDATDPMGVNMSETFVILKPRSEW 629
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 638 PDPsLSKDALVQRIRHRVNEVPGNNYEFTQPIEMRFNELIAGVRADVALRIYGDDLAILKQFGEKATSLMRNITGATDVR 717
Cdd:COG3696 630 RSG-RTKEELIAEMREALEQIPGVNFNFSQPIQMRVDELLSGVRADVAVKIFGDDLDVLRRLAEQIEAVLKTVPGAADVQ 708
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 718 LEQMEGLPTLSVTPMRDHMALLGLTVNDIQQTLAAAVGGVQTGLIYEGDKRFSLLVRLDKRWSEDVSALARLPIALPQSs 797
Cdd:COG3696 709 VERVTGLPQLDIRIDRDAAARYGLNVADVQDVVETAIGGKAVGQVYEGERRFDIVVRLPEELRDDPEAIRNLPIPTPSG- 787
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 798 npelAFVPLGEVATISIEKGPNQINRESGKRNVVVTANVAGRDLASFVRDAQATMNAQLNLPSGYWLEYGGTFEQLQSAS 877
Cdd:COG3696 788 ----AQVPLSQVADIEVVEGPNQISRENGRRRIVVQANVRGRDLGSFVAEAQAKVAEQVKLPPGYYIEWGGQFENLQRAT 863
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 878 KRLSLVVPVTLLLIFGLLYSAFGSLRDSLIIFSGVPLALTGGVLALLLRDMPLSISAGVGFIALSGVAVLNGVVMLSFIK 957
Cdd:COG3696 864 ARLAIVVPLALLLIFLLLYLAFGSVRDALLILLNVPFALIGGVLALWLRGMPLSVSAGVGFIALFGVAVLNGVVLVSYIN 943
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1590405811 958 QLRNEGLSLYYAIHSGALQRLRPVLMTALVASLGFIPMALNTGTGAEIQRPLATVVVGGIMSST 1021
Cdd:COG3696 944 QLRAEGLDLREAIIEGALERLRPVLMTALVAALGLLPMALSTGPGSEVQRPLATVVIGGLITST 1007
|
|
| 2A0601 |
TIGR00914 |
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation ... |
1-1043 |
0e+00 |
|
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation antiporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 129992 [Multi-domain] Cd Length: 1051 Bit Score: 1335.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 1 MINWIVSFAVKRRMMVLALTFLFAGFGVYNIQNLAVDAVPDITNVQVQINSKAPGFTPLEVEQRITYLVETAMAGIPKLD 80
Cdd:TIGR00914 1 MIERIISFSVAQRWLVLLATLVMAILGIWSYNRLPIDAVPDITNVQVQINTSAPGYSPLEVEQRVTYPIETAMAGLPGLE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 81 YTRSLSRYGLSQVTIIFDEGTDIYWARQQIGERIQSIRADLPNNVEPNLGPIASGLGEIFTYSVHAKPDALKSDGMPYSA 160
Cdd:TIGR00914 81 TTRSLSRYGLSQVTVIFKDGTDLYFARQLVNERLQQARDNLPEGVSPEMGPISTGLGEIFLYTVEAEEGARKKDGGAYTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 161 EDLRTLQDWVIRPQLLKVKGVTEINSQGGFERQYQVAPIPEKLIAYKLTIKDVITALELNNSNRGAGYIERFDGQYLVRS 240
Cdd:TIGR00914 161 TDLRTIQDWIIRPQLRTVPGVAEVNSIGGYVKQFLVAPDPEKLAAYGLSLADVVNALERNNQNVGAGYIERRGEQYLVRA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 241 PGQLKTLADIANTVIAKRDDAPVRIKDVANVYLGKELRTGAATYNGEETVLGTAMMLIGENSRVVAKAMADKLIQVQKSL 320
Cdd:TIGR00914 241 PGQVQSMDDIRNIVIATGEGVPIRIRDVARVQIGKELRTGAATENGKEVVLGTVFMLIGENSRTVAQAVGDKLETINKTL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 321 PAGVIVEPVYDRTNLVDKTIATVQKNLFEGAVLVIVILLLLLGNITGALITAMVIPLSMLFAITGMVGNRVSGNLMSLGA 400
Cdd:TIGR00914 321 PEGVEIVTTYDRSQLVDAAIATVKKNLLEGALLVIVILFLFLGNIRAALIAATVIPLSLLITFIGMVFQGISANLMSLGA 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 401 IDFGLIVDGAVIVVENCLRQLGMAQHKHGRLLTLSERLEVVTSATKEVFSPAVFGILIIMLVYLPLFALSGVEGKMFQPM 480
Cdd:TIGR00914 401 LDFGLIVDGAVVIVENAHRRLAEAQHHHGRQLTLKERLHEVFAASREVRRPLIFGQLIITLVFLPIFTLTGVEGKMFHPM 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 481 AFTVVAALIGALIFAVTFVPAAIAVFVRGKVDESENAVMRGVKKIYKPLLNLSLKLPWLMISIATVLVLVLGFKVKNMGA 560
Cdd:TIGR00914 481 AFTVVLALAGAMILSLTFVPAAVALFIRGKVAEKENRLMRVLKRRYEPLLERVLAWPAVVLGAAAVSIVLVVWIASRVGG 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 561 EFLPQLDEGDIAMHALRITGTGIEQSVQMQKQLEQALLAQPEIANVFSKIGTADVASDPMPPNVADTFLMLKPRAQWPDP 640
Cdd:TIGR00914 561 EFIPSLNEGDLAYQALRIPGTSLAQSVAMQQTLEKLIKSFPEVARVFAKTGTAEIATDPMPPNASDTYIILKPESQWPEG 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 641 SLSKDALVQRIRHRVNEVPGNNYEFTQPIEMRFNELIAGVRADVALRIYGDDLAILKQFGEKATSLMRNITGATDVRLEQ 720
Cdd:TIGR00914 641 KKTKEDLIEEIQEATVRIPGNNYEFTQPIQMRFNELISGVRSDVAVKVFGDDLDDLDATAEKISAVLKGVPGAADVKVEQ 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 721 MEGLPTLSVTPMRDHMALLGLTVNDIQQTLAAAVGGVQTGLIYEGDKRFSLLVRLDKRWSEDVSALARLPIALPQSSNPE 800
Cdd:TIGR00914 721 TTGLPYLTVEIDREKAARYGLTVGDVQDTVATAVGGRMSGETFEGDRRFDIVIRLPESLRESPQALRQLPIPLPLSEDAR 800
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 801 LAFVPLGEVATISIEKGPNQINRESGKRNVVVTANVAGRDLASFVRDAQATMNAQLNLPSGYWLEYGGTFEQLQSASKRL 880
Cdd:TIGR00914 801 KQFIPLSDVADLRVSPGPNQISRENGKRRVVVSANVRGRDLGSFVDDAKKAIAEQVKLPPGYWITWGGQFEQLQSATKRL 880
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 881 SLVVPVTLLLIFGLLYSAFGSLRDSLIIFSGVPLALTGGVLALLLRDMPLSISAGVGFIALSGVAVLNGVVMLSFIKQLR 960
Cdd:TIGR00914 881 QIVVPVTLLLIFVLLYAAFGNVKDALLVFTGIPFALTGGVFALWLRGIPLSISAAVGFIALSGVAVLNGLVMISFIRKLL 960
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 961 NEGLSLYYAIHSGALQRLRPVLMTALVASLGFIPMALNTGTGAEIQRPLATVVVGGIMSSTLLTLLILPALYKLVHGKFK 1040
Cdd:TIGR00914 961 EEGPSLDEAVYEGALTRVRPVLMTALVASLGFVPMAIATGTGAEVQRPLATVVIGGIITATLLTLFVLPALYRLVHRRRH 1040
|
...
gi 1590405811 1041 KQQ 1043
Cdd:TIGR00914 1041 KGR 1043
|
|
| ACR_tran |
pfam00873 |
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are ... |
5-1036 |
0e+00 |
|
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are involved in drug resistance. AcrB cooperates with a membrane fusion protein, AcrA, and an outer membrane channel TolC. The structure shows the AcrB forms a homotrimer.
Pssm-ID: 395701 [Multi-domain] Cd Length: 1021 Bit Score: 950.58 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 5 IVSFAVKRRMMVLALTFLFAGFGVYNIQNLAVDAVPDITNVQVQINSKAPGFTPLEVEQRITYLVETAMAGIPKLDYTRS 84
Cdd:pfam00873 1 MSKFFIRRPIFTLVLAIAILLAGILSFFSLPVDAFPEIAPPTVQVSTSYPGASPEEVEDTVTQPIEQAMNGLDGLKYMSS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 85 LSRYGLSQVTIIFDEGTDIYWARQQIGERIQSIRADLPNNV-EPNLGPIASGLGEIFTYsvhakpdALKSDGMPYSAEDL 163
Cdd:pfam00873 81 QSSYGLSSITLTFELGTDIDIARQDVQNRLQLATPLLPEGVqRPGISVIKTSLGPIMVL-------AVTSPDGSYTQTDL 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 164 RTLQDWVIRPQLLKVKGVTEINSQGGFERQYQVAPIPEKLIAYKLTIKDVITALELNNSNRGAGYIERFDGQYLVRSPGQ 243
Cdd:pfam00873 154 RDYADTNIKPQLSRVPGVGDVQLFGGSEYAMRIWLDPQKLARYGLTLTDVVSALKEQNVNIGAGQLEGQGLQALIRAQGQ 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 244 LKTLADIANTVIAKRDDAPVRIKDVANVYLGKELRTGAATYNGEETVLGTAMMLIGENSRVVAKAMADKLIQVQKSLPAG 323
Cdd:pfam00873 234 LQSAEDFEKIIVKNQDGSPVRLRDVATVELGSELYRGFATFNGKPAVGLGVQKLPGANAIETADAVRAKLAELKPTFPQG 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 324 VIVEPVYDRTNLVDKTIATVQKNLFEGAVLVIVILLLLLGNITGALITAMVIPLSMLFAITGMVGNRVSGNLMSLGAIDF 403
Cdd:pfam00873 314 VEIVVVYDTTPFIRASIEEVVKTLLEAIVLVILVMFLFLQNWRATLIPAIAIPLSLLGTFAVMKAFGFSINTLTLGGLVL 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 404 --GLIVDGAVIVVENCLRQLGMAQHKHgrlltlserLEVVTSATKEVFSPAVFGILIIMLVYLPLFALSGVEGKMFQPMA 481
Cdd:pfam00873 394 aiGLVVDDAIVVVENIERVLEENGLKP---------LEAAYKSMGEIGGALVAIALVLSAVFLPILFLGGLTGRIFRQFA 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 482 FTVVAALIGALIFAVTFVPAAIAVFVRGKVDESE-------NAVMRGVKKIYKPLLNLSLKLPWLMISIATVLVLVLGFK 554
Cdd:pfam00873 465 ITIVLAILLSVLVALTLTPALCATLLKPRREPKHggffrwfNRMFDRLTRGYAKLLAKVLRHTAVVLLVALLLVVGSVWL 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 555 VKNMGAEFLPQLDEGDIAMHALRITGTGIEQSVQMQKQLEQALLAQPEIANVFSKIGTADvASDPMPPNVADTFLMLKPR 634
Cdd:pfam00873 545 FVRIPTEFLPEEDEGVFVTSAQLPPGVSLDQTQRVMKQVEKILKEKPEVESVFAVTGFAF-SGDNNGPNSGDAFISLKPW 623
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 635 AQWPDPSLSKDALVQRIRHRVNEVPGNNYEFTQPIEMRFNELIAGVRADVALRIYGDDLAILKQFGEKATSLMRNITGAT 714
Cdd:pfam00873 624 KERPGPEKSVQALIERLRKALKQIPGANVFLFQPIQLRGLGTISGFRSDLQVKIFGDDLDALDEARNQILAALAQLPGLS 703
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 715 DVRLEQMEGLPTLSVTPMRDHMALLGLTVNDIQQTLAAAVGGVQTGLIYEGDKRFSLLVRLDKRWSEDVSALARLPIalp 794
Cdd:pfam00873 704 DVRSDGQEDQPQLQVNIDREKAARLGVSIQDINDTLSTALGGSYVNDFPEGGRVYDVVVQLPEDFRSSPEDIGQLYV--- 780
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 795 qsSNPELAFVPLGEVATISIEKGPNQINRESGKRNVVVTANVAGRDLASFVRDAQATMNAQLNLPSGYWLEYGGTFEQLQ 874
Cdd:pfam00873 781 --RNPYGKMIPLSAFAKIEWGYGPPSINRYNGFRSIVISGNVAAGDSLGDAMEAMAQIAKQVKLPPGYGYTWTGQFEQEQ 858
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 875 SASKRLSLVVPVTLLLIFGLLYSAFGSLRDSLIIFSGVPLALTGGVLALLLRDMPLSISAGVGFIALSGVAVLNGVVMLS 954
Cdd:pfam00873 859 LAGNSLPILIALALLVVFLVLAALYESWSDPLSIMLTVPLALVGALLALWLRGLPNSVYAQVGLILLIGLAVKNAILMVE 938
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 955 FIKQLR-NEGLSLYYAIHSGALQRLRPVLMTALVASLGFIPMALNTGTGAEIQRPLATVVVGGIMSSTLLTLLILPALYK 1033
Cdd:pfam00873 939 FANELReQEGKSLEEAILEACRLRLRPILMTALAAILGVLPLALSTGAGSELQQPLGIVVFGGLVTSTVLTLLVVPVFYV 1018
|
...
gi 1590405811 1034 LVH 1036
Cdd:pfam00873 1019 LFH 1021
|
|
| RND_permease_2 |
NF033617 |
multidrug efflux RND transporter permease subunit; |
10-1021 |
1.85e-123 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 411236 [Multi-domain] Cd Length: 1009 Bit Score: 402.09 E-value: 1.85e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 10 VKRRMMVLALTFLFAGFGVYNIQNLAVDAVPDITNVQVQINSKAPGFTPLEVEQRITYLVETAMAGIPKLDYTRSLSRYG 89
Cdd:NF033617 5 IKRPVATLLLSLLILLLGLLAFRKLPVREYPEVDFPTITVSTSYPGASPELMQSSITQPLEQQLAQIEGIDEMTSQSSLG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 90 LSQVTIIFDEGTDIYWARQQIGERIQSIRADLPNN-----VEPNLGPIASGLGEIftysvhakpdALKSDGMPYSAedLR 164
Cdd:NF033617 85 YSTITLQFRLGTDLDVALSEVQAAINAAQSLLPSEapdppVYRKANSADTPIMYI----------GLTSEEMPRGQ--LT 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 165 TLQDWVIRPQLLKVKGVTEINSQGGFERQYQVAPIPEKLIAYKLTIKDVITALELNNSNRGAGYIERFDGQYLVRSPGQL 244
Cdd:NF033617 153 DYAERVLAPKLSQINGVGSVDVSGGQRPAMRVWLDPEKMAARGLTADDVRSALNSNNVNSPKGAVRGDSVVSTVRANDQL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 245 KTLADIANTVIAKRDD-APVRIKDVANVYLGKELRTGAATYNGEETVLGTAMMLIGENSRVVAKAMADKLIQVQKSLPAG 323
Cdd:NF033617 233 KTAEDYEDLVIKYADNgAPVRLGDVATVELGAENVRNRAWANGVPAVVLGINRQPGANPIEVADEIRALLPELQETLPKN 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 324 VIVEPVYDRTNLVDKTIATVQKNLFEGAVLVIVILLLLLGNITGALITAMVIPLSMLFAITGMVGNRVSGNLMSLGA--I 401
Cdd:NF033617 313 IKVNVLYDRTRFIRASIDEVESTLLEAVALVILVVFLFLRNLRATLIPAVTVPLSLIGTFAVMYLFGFSINLLTLMAlvL 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 402 DFGLIVDGAVIVVENCLRQL--GMAQhkhgrlltlserLEVVTSATKEVFSPAVFGILIIMLVYLPLFALSGVEGKMFQP 479
Cdd:NF033617 393 AIGLVVDDAIVVVENIHRHIeeGESP------------LEAALKGAREIGFTVIAMTLTLVAVYLPILFMGGLTGRLFRE 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 480 MAFTVVAALIGALIFAVTFVPAAIAVFVRGKVDESENA-----VMRGVKKIYKPLLNLSLKLPWLMISIA--TVLVLVLG 552
Cdd:NF033617 461 FAVTLAGAVIISGIVALTLTPMMCSRLLKANEKPGRFAravdrFFDGLTARYGRGLKWVLKHRPLTLVVAlaTLALLPLL 540
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 553 FKVknMGAEFLPQLDEGDIAMHALRITGTGIEQSVQMQKQLEQALLAQPEIANVFSKIGTADVASDpmppNVADTFLMLK 632
Cdd:NF033617 541 YVF--IPKELAPSEDRGVIFGMIQAPQSISLDYMSAKMRDVEKILSSDPEVQSLTSFNGVGGNPGD----NTGFGIINLK 614
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 633 PraqWPDPSLSKDALVQRIRHRVNEVPGnnyefTQPIEMRFNELIAGVRADVALRIY---GDDLAILKQFGEKATSLMRN 709
Cdd:NF033617 615 P---WDERDVSAQEIIDRLRPKLAKVPG-----MDLFLFPLQDLPGGAGSSLPQYQVtltPSDYDSLFTWAEKLKEKLRK 686
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 710 ITGATDVRLEQMEGLPTLSVTPMRDHMALLGLTVNDIQQTLAAAVGGVQTGLIYEGDKRFSLLVRLDKRWSEDVSALARL 789
Cdd:NF033617 687 SPQFADVDSDLQDKGPELNVDIDRDKAARLGISMQDIGSTLEVAFGQRQVNTIYTDGNQYKVVLEVDRRYRLNPEALNQI 766
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 790 PIalpQSSNPELafVPLGEVATISIEKGPNQINRESGKRNVVVTANVA-GRDLASFVrdaQATMN-AQLNLPSGYWLEYG 867
Cdd:NF033617 767 YV---RSNDGKL--VPLSTLAKIEERAAPLSLNHFNQFNSATLSFNLApGVSLGEAI---EALDQaAKELLPSGISGSFQ 838
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 868 GTFEQLQSASKRLSLVVPVTLLLIFGLLYSAFGSLRDSLIIFSGVPLALTGGVLALLLRDMPLSISAGVGFIALSGVAVL 947
Cdd:NF033617 839 GAARAFQEEGSSLLFLFLLALAAIYLVLAIQYESFVDPLTILSTVPLAGCGALLALALGGQSMNIYAQIGLITLIGLVKK 918
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1590405811 948 NGVVMLSFIKQL-RNEGLSLYYAIHSGALQRLRPVLMTALVASLGFIPMALNTGTGAEIQRPLATVVVGGIMSST 1021
Cdd:NF033617 919 NGILMVEFANELqRHQGLSRREAIYQAAALRLRPILMTTLAMLLGAIPLMLSTGAGAESRFPLGIVIVGGLGVGT 993
|
|
| PRK09577 |
PRK09577 |
multidrug efflux RND transporter permease subunit; |
16-1021 |
2.20e-64 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169981 [Multi-domain] Cd Length: 1032 Bit Score: 236.67 E-value: 2.20e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 16 VLALTFLFAGfgVYNIQNLAVDAVPDITNVQVQINSKAPGFTPLEVEQRITYLVETAMAGIPKLDYTRSLSRYGLSQVTI 95
Cdd:PRK09577 14 VISLFIMLGG--IFAIRALPVAQYPDIAPPVVSIYATYPGASAQVVEESVTALIEREMNGAPGLLYTSATSSAGQASLSL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 96 IFDEGTDIYWARQQIGERIQSIRADLPNNVEPNlGPIASGLGEIFTYSVhakpdALKSDGMPYSAEDLRTLQDWVIRPQL 175
Cdd:PRK09577 92 TFKQGVNADLAAVEVQNRLKTVEARLPEPVRRD-GIQVEKAADNIQLIV-----SLTSDDGRLTGVELGEYASANVLQAL 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 176 LKVKGVTEINSQGGfERQYQVAPIPEKLIAYKLTIKDVITALELNNSNRGAGYIERF---DGQYL---VRSPGQLKTLAD 249
Cdd:PRK09577 166 RRVEGVGKVQFWGA-EYAMRIWPDPVKLAALGLTASDIASAVRAHNARVTIGDIGRSavpDSAPIaatVFADAPLKTPED 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 250 IANTVI-AKRDDAPVRIKDVANVYLGKELRTGAATYNGEETVLGTAMMLIGENSRVVAKAMADKLIQVQKSLPAGVIVEP 328
Cdd:PRK09577 245 FGAIALrARADGSALYLRDVARIEFGGNDYNYPSYVNGKTATGMGIKLAPGSNAVATEKRVRATMDELSRYFPPGVKYQI 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 329 VYDRTNLVDKTIATVQKNLFEGAVLVIVILLLLLGNITGALITAMVIPLSMLFAITGMVGNRVSGNLMSL--GAIDFGLI 406
Cdd:PRK09577 325 PYETSSFVRVSMNKVVTTLIEAGVLVFLVMFLFMQNFRATLIPTLVVPVALLGTFGVMLAAGFSINVLTMfgMVLAIGIL 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 407 VDGAVIVVENCLRqlgmaqhkhgrlLTLSERL---EVVTSATKEVfSPAVFGILIIML-VYLPLFALSGVEGKMFQPMAF 482
Cdd:PRK09577 405 VDDAIVVVENVER------------LMVEEGLspyDATVKAMKQI-SGAIVGITVVLTsVFVPMAFFGGAVGNIYRQFAL 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 483 TVVAALIGALIFAVTFVPAAIAVFVRGKVDESEN----------AVMRGVKKiYKPLLNLSLKLP--WLMISIATVLVLV 550
Cdd:PRK09577 472 SLAVSIGFSAFLALSLTPALCATLLKPVDGDHHEkrgffgwfnrFVARSTQR-YATRVGAILKRPlrWLVVYGALTAAAA 550
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 551 LGFkvKNMGAEFLPQLDEGDIAMHALRITGTGIEQSVQMQKQLEQALLAQPEIANVFSkIGTADVASDpmPPNVADTFLM 630
Cdd:PRK09577 551 LLF--TRLPTAFLPDEDQGNFMVMVIRPQGTPLAETMQSVREVESYLRRHEPVAYTFA-LGGFNLYGE--GPNGGMIFVT 625
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 631 LKPRAQWPDPSLSKDALVQRIRHRVNEVPGNN-YEFTQPiemRFNELIAGVRADVALRIYGD-DLAILKQFGEKATSLMR 708
Cdd:PRK09577 626 LKDWKERKAARDHVQAIVARINERFAGTPNTTvFAMNSP---ALPDLGSTSGFDFRLQDRGGlGYAAFVAAREQLLAEGA 702
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 709 NITGATDVRLEQMEGLPTLSVTPMRDHMALLGLTVNDIQQTLAAAVGGVQTGLIYEGDKRFSLLVRLDKRWSEDVSALAR 788
Cdd:PRK09577 703 KDPALTDLMFAGTQDAPQLKLDIDRAKASALGVSMDEINTTLAVMFGSDYIGDFMHGSQVRRVIVQADGRHRLDPDDVKK 782
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 789 LPIalpQSSNPELafVPLGEVATISIEKGPNQINRESGKRNVVVTANVA-----GRDLASFVRDAQatmnaqlNLPSGYW 863
Cdd:PRK09577 783 LRV---RNAQGEM--VPLAAFATLHWTLGPPQLTRYNGYPSFTINGSAApghssGEAMAAIERIAA-------TLPAGIG 850
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 864 LEYGGtfeqlQSASKRLS-----LVVPVTLLLIFGLLYSAFGSLRDSLIIFSGVPLALTGGVLALLLRDMPLSISAGVGF 938
Cdd:PRK09577 851 YAWSG-----QSFEERLSgaqapMLFALSVLVVFLALAALYESWSIPFAVMLVVPLGVIGAVLGVTLRGMPNDIYFKVGL 925
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 939 IALSGVAVLNGVVMLSFIKQLRNEGLSLYYAIHSGALQRLRPVLMTALVASLGFIPMALNTGTGAEIQRPLATVVVGGIM 1018
Cdd:PRK09577 926 IATIGLSAKNAILIVEVAKDLVAQRMSLADAALEAARLRLRPIVMTSLAFGVGVLPLAFASGAASGAQIAIGTGVLGGVI 1005
|
...
gi 1590405811 1019 SST 1021
Cdd:PRK09577 1006 TAT 1008
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CusA |
COG3696 |
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism]; |
1-1021 |
0e+00 |
|
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism];
Pssm-ID: 442911 [Multi-domain] Cd Length: 1031 Bit Score: 1482.20 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 1 MINWIVSFAVKRRMMVLALTFLFAGFGVYNIQNLAVDAVPDITNVQVQINSKAPGFTPLEVEQRITYLVETAMAGIPKLD 80
Cdd:COG3696 1 MLNRIIRFSLRNRLLVLLLTLLLAAAGIYSLRRLPIDAFPDITNVQVQVITEAPGLSPEEVEQQVTYPIETALNGLPGVK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 81 YTRSLSRYGLSQVTIIFDEGTDIYWARQQIGERIQSIRADLPNNVEPNLGPIASGLGEIFTYsvhakpdALKSDGMPYSA 160
Cdd:COG3696 81 EVRSISRFGLSVVTVIFEDGTDIYWARQLVLERLQQVREQLPAGVTPELGPISTGLGEIYQY-------TLESDPGKYSL 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 161 EDLRTLQDWVIRPQLLKVKGVTEINSQGGFERQYQVAPIPEKLIAYKLTIKDVITALELNNSNRGAGYIERFDGQYLVRS 240
Cdd:COG3696 154 MELRTLQDWVIRPQLRSVPGVAEVNSFGGFVKQYQVLVDPAKLRAYGLTLDDVIEALERNNANVGGGYIERGGQEYLVRG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 241 PGQLKTLADIANTVIAKRDDAPVRIKDVANVYLGKELRTGAATYNGE-ETVLGTAMMLIGENSRVVAKAMADKLIQVQKS 319
Cdd:COG3696 234 IGLIRSLEDIENIVVKTRNGTPVLLRDVAEVRIGPAPRRGAATLNGEgEVVGGIVLMLKGENALEVIEAVKAKLAELKPS 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 320 LPAGVIVEPVYDRTNLVDKTIATVQKNLFEGAVLVIVILLLLLGNITGALITAMVIPLSMLFAITGMVGNRVSGNLMSLG 399
Cdd:COG3696 314 LPEGVKIVPFYDRSDLIDRAIHTVTKNLLEGALLVILVLFLFLGNLRAALIVALAIPLSLLFAFIVMRLFGISANLMSLG 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 400 --AIDFGLIVDGAVIVVENCLRQLGMAQHKHGRLltlsERLEVVTSATKEVFSPAVFGILIIMLVYLPLFALSGVEGKMF 477
Cdd:COG3696 394 glAIDFGIIVDGAVVMVENILRRLEENRAAGTPR----ERLEVVLEAAREVRRPIFFATLIIILVFLPIFTLEGVEGKLF 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 478 QPMAFTVVAALIGALIFAVTFVPAAIAVFVRGKVDESENAVMRGVKKIYKPLLNLSLKLPWLMISIATVLVLVLGFKVKN 557
Cdd:COG3696 470 RPMALTVIFALLGALLLSLTLVPVLASLLLRGKVPEKENPLVRWLKRLYRPLLRWALRHPKLVLAVALVLLVLALALFPR 549
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 558 MGAEFLPQLDEGDIAMHALRITGTGIEQSVQMQKQLEQALLAQPEIANVFSKIGTADVASDPMPPNVADTFLMLKPRAQW 637
Cdd:COG3696 550 LGSEFLPELDEGDLLVMATLPPGISLEESVELGQQVERILKSFPEVESVVSRTGRAEDATDPMGVNMSETFVILKPRSEW 629
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 638 PDPsLSKDALVQRIRHRVNEVPGNNYEFTQPIEMRFNELIAGVRADVALRIYGDDLAILKQFGEKATSLMRNITGATDVR 717
Cdd:COG3696 630 RSG-RTKEELIAEMREALEQIPGVNFNFSQPIQMRVDELLSGVRADVAVKIFGDDLDVLRRLAEQIEAVLKTVPGAADVQ 708
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 718 LEQMEGLPTLSVTPMRDHMALLGLTVNDIQQTLAAAVGGVQTGLIYEGDKRFSLLVRLDKRWSEDVSALARLPIALPQSs 797
Cdd:COG3696 709 VERVTGLPQLDIRIDRDAAARYGLNVADVQDVVETAIGGKAVGQVYEGERRFDIVVRLPEELRDDPEAIRNLPIPTPSG- 787
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 798 npelAFVPLGEVATISIEKGPNQINRESGKRNVVVTANVAGRDLASFVRDAQATMNAQLNLPSGYWLEYGGTFEQLQSAS 877
Cdd:COG3696 788 ----AQVPLSQVADIEVVEGPNQISRENGRRRIVVQANVRGRDLGSFVAEAQAKVAEQVKLPPGYYIEWGGQFENLQRAT 863
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 878 KRLSLVVPVTLLLIFGLLYSAFGSLRDSLIIFSGVPLALTGGVLALLLRDMPLSISAGVGFIALSGVAVLNGVVMLSFIK 957
Cdd:COG3696 864 ARLAIVVPLALLLIFLLLYLAFGSVRDALLILLNVPFALIGGVLALWLRGMPLSVSAGVGFIALFGVAVLNGVVLVSYIN 943
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1590405811 958 QLRNEGLSLYYAIHSGALQRLRPVLMTALVASLGFIPMALNTGTGAEIQRPLATVVVGGIMSST 1021
Cdd:COG3696 944 QLRAEGLDLREAIIEGALERLRPVLMTALVAALGLLPMALSTGPGSEVQRPLATVVIGGLITST 1007
|
|
| 2A0601 |
TIGR00914 |
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation ... |
1-1043 |
0e+00 |
|
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation antiporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 129992 [Multi-domain] Cd Length: 1051 Bit Score: 1335.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 1 MINWIVSFAVKRRMMVLALTFLFAGFGVYNIQNLAVDAVPDITNVQVQINSKAPGFTPLEVEQRITYLVETAMAGIPKLD 80
Cdd:TIGR00914 1 MIERIISFSVAQRWLVLLATLVMAILGIWSYNRLPIDAVPDITNVQVQINTSAPGYSPLEVEQRVTYPIETAMAGLPGLE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 81 YTRSLSRYGLSQVTIIFDEGTDIYWARQQIGERIQSIRADLPNNVEPNLGPIASGLGEIFTYSVHAKPDALKSDGMPYSA 160
Cdd:TIGR00914 81 TTRSLSRYGLSQVTVIFKDGTDLYFARQLVNERLQQARDNLPEGVSPEMGPISTGLGEIFLYTVEAEEGARKKDGGAYTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 161 EDLRTLQDWVIRPQLLKVKGVTEINSQGGFERQYQVAPIPEKLIAYKLTIKDVITALELNNSNRGAGYIERFDGQYLVRS 240
Cdd:TIGR00914 161 TDLRTIQDWIIRPQLRTVPGVAEVNSIGGYVKQFLVAPDPEKLAAYGLSLADVVNALERNNQNVGAGYIERRGEQYLVRA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 241 PGQLKTLADIANTVIAKRDDAPVRIKDVANVYLGKELRTGAATYNGEETVLGTAMMLIGENSRVVAKAMADKLIQVQKSL 320
Cdd:TIGR00914 241 PGQVQSMDDIRNIVIATGEGVPIRIRDVARVQIGKELRTGAATENGKEVVLGTVFMLIGENSRTVAQAVGDKLETINKTL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 321 PAGVIVEPVYDRTNLVDKTIATVQKNLFEGAVLVIVILLLLLGNITGALITAMVIPLSMLFAITGMVGNRVSGNLMSLGA 400
Cdd:TIGR00914 321 PEGVEIVTTYDRSQLVDAAIATVKKNLLEGALLVIVILFLFLGNIRAALIAATVIPLSLLITFIGMVFQGISANLMSLGA 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 401 IDFGLIVDGAVIVVENCLRQLGMAQHKHGRLLTLSERLEVVTSATKEVFSPAVFGILIIMLVYLPLFALSGVEGKMFQPM 480
Cdd:TIGR00914 401 LDFGLIVDGAVVIVENAHRRLAEAQHHHGRQLTLKERLHEVFAASREVRRPLIFGQLIITLVFLPIFTLTGVEGKMFHPM 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 481 AFTVVAALIGALIFAVTFVPAAIAVFVRGKVDESENAVMRGVKKIYKPLLNLSLKLPWLMISIATVLVLVLGFKVKNMGA 560
Cdd:TIGR00914 481 AFTVVLALAGAMILSLTFVPAAVALFIRGKVAEKENRLMRVLKRRYEPLLERVLAWPAVVLGAAAVSIVLVVWIASRVGG 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 561 EFLPQLDEGDIAMHALRITGTGIEQSVQMQKQLEQALLAQPEIANVFSKIGTADVASDPMPPNVADTFLMLKPRAQWPDP 640
Cdd:TIGR00914 561 EFIPSLNEGDLAYQALRIPGTSLAQSVAMQQTLEKLIKSFPEVARVFAKTGTAEIATDPMPPNASDTYIILKPESQWPEG 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 641 SLSKDALVQRIRHRVNEVPGNNYEFTQPIEMRFNELIAGVRADVALRIYGDDLAILKQFGEKATSLMRNITGATDVRLEQ 720
Cdd:TIGR00914 641 KKTKEDLIEEIQEATVRIPGNNYEFTQPIQMRFNELISGVRSDVAVKVFGDDLDDLDATAEKISAVLKGVPGAADVKVEQ 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 721 MEGLPTLSVTPMRDHMALLGLTVNDIQQTLAAAVGGVQTGLIYEGDKRFSLLVRLDKRWSEDVSALARLPIALPQSSNPE 800
Cdd:TIGR00914 721 TTGLPYLTVEIDREKAARYGLTVGDVQDTVATAVGGRMSGETFEGDRRFDIVIRLPESLRESPQALRQLPIPLPLSEDAR 800
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 801 LAFVPLGEVATISIEKGPNQINRESGKRNVVVTANVAGRDLASFVRDAQATMNAQLNLPSGYWLEYGGTFEQLQSASKRL 880
Cdd:TIGR00914 801 KQFIPLSDVADLRVSPGPNQISRENGKRRVVVSANVRGRDLGSFVDDAKKAIAEQVKLPPGYWITWGGQFEQLQSATKRL 880
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 881 SLVVPVTLLLIFGLLYSAFGSLRDSLIIFSGVPLALTGGVLALLLRDMPLSISAGVGFIALSGVAVLNGVVMLSFIKQLR 960
Cdd:TIGR00914 881 QIVVPVTLLLIFVLLYAAFGNVKDALLVFTGIPFALTGGVFALWLRGIPLSISAAVGFIALSGVAVLNGLVMISFIRKLL 960
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 961 NEGLSLYYAIHSGALQRLRPVLMTALVASLGFIPMALNTGTGAEIQRPLATVVVGGIMSSTLLTLLILPALYKLVHGKFK 1040
Cdd:TIGR00914 961 EEGPSLDEAVYEGALTRVRPVLMTALVASLGFVPMAIATGTGAEVQRPLATVVIGGIITATLLTLFVLPALYRLVHRRRH 1040
|
...
gi 1590405811 1041 KQQ 1043
Cdd:TIGR00914 1041 KGR 1043
|
|
| ACR_tran |
pfam00873 |
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are ... |
5-1036 |
0e+00 |
|
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are involved in drug resistance. AcrB cooperates with a membrane fusion protein, AcrA, and an outer membrane channel TolC. The structure shows the AcrB forms a homotrimer.
Pssm-ID: 395701 [Multi-domain] Cd Length: 1021 Bit Score: 950.58 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 5 IVSFAVKRRMMVLALTFLFAGFGVYNIQNLAVDAVPDITNVQVQINSKAPGFTPLEVEQRITYLVETAMAGIPKLDYTRS 84
Cdd:pfam00873 1 MSKFFIRRPIFTLVLAIAILLAGILSFFSLPVDAFPEIAPPTVQVSTSYPGASPEEVEDTVTQPIEQAMNGLDGLKYMSS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 85 LSRYGLSQVTIIFDEGTDIYWARQQIGERIQSIRADLPNNV-EPNLGPIASGLGEIFTYsvhakpdALKSDGMPYSAEDL 163
Cdd:pfam00873 81 QSSYGLSSITLTFELGTDIDIARQDVQNRLQLATPLLPEGVqRPGISVIKTSLGPIMVL-------AVTSPDGSYTQTDL 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 164 RTLQDWVIRPQLLKVKGVTEINSQGGFERQYQVAPIPEKLIAYKLTIKDVITALELNNSNRGAGYIERFDGQYLVRSPGQ 243
Cdd:pfam00873 154 RDYADTNIKPQLSRVPGVGDVQLFGGSEYAMRIWLDPQKLARYGLTLTDVVSALKEQNVNIGAGQLEGQGLQALIRAQGQ 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 244 LKTLADIANTVIAKRDDAPVRIKDVANVYLGKELRTGAATYNGEETVLGTAMMLIGENSRVVAKAMADKLIQVQKSLPAG 323
Cdd:pfam00873 234 LQSAEDFEKIIVKNQDGSPVRLRDVATVELGSELYRGFATFNGKPAVGLGVQKLPGANAIETADAVRAKLAELKPTFPQG 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 324 VIVEPVYDRTNLVDKTIATVQKNLFEGAVLVIVILLLLLGNITGALITAMVIPLSMLFAITGMVGNRVSGNLMSLGAIDF 403
Cdd:pfam00873 314 VEIVVVYDTTPFIRASIEEVVKTLLEAIVLVILVMFLFLQNWRATLIPAIAIPLSLLGTFAVMKAFGFSINTLTLGGLVL 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 404 --GLIVDGAVIVVENCLRQLGMAQHKHgrlltlserLEVVTSATKEVFSPAVFGILIIMLVYLPLFALSGVEGKMFQPMA 481
Cdd:pfam00873 394 aiGLVVDDAIVVVENIERVLEENGLKP---------LEAAYKSMGEIGGALVAIALVLSAVFLPILFLGGLTGRIFRQFA 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 482 FTVVAALIGALIFAVTFVPAAIAVFVRGKVDESE-------NAVMRGVKKIYKPLLNLSLKLPWLMISIATVLVLVLGFK 554
Cdd:pfam00873 465 ITIVLAILLSVLVALTLTPALCATLLKPRREPKHggffrwfNRMFDRLTRGYAKLLAKVLRHTAVVLLVALLLVVGSVWL 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 555 VKNMGAEFLPQLDEGDIAMHALRITGTGIEQSVQMQKQLEQALLAQPEIANVFSKIGTADvASDPMPPNVADTFLMLKPR 634
Cdd:pfam00873 545 FVRIPTEFLPEEDEGVFVTSAQLPPGVSLDQTQRVMKQVEKILKEKPEVESVFAVTGFAF-SGDNNGPNSGDAFISLKPW 623
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 635 AQWPDPSLSKDALVQRIRHRVNEVPGNNYEFTQPIEMRFNELIAGVRADVALRIYGDDLAILKQFGEKATSLMRNITGAT 714
Cdd:pfam00873 624 KERPGPEKSVQALIERLRKALKQIPGANVFLFQPIQLRGLGTISGFRSDLQVKIFGDDLDALDEARNQILAALAQLPGLS 703
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 715 DVRLEQMEGLPTLSVTPMRDHMALLGLTVNDIQQTLAAAVGGVQTGLIYEGDKRFSLLVRLDKRWSEDVSALARLPIalp 794
Cdd:pfam00873 704 DVRSDGQEDQPQLQVNIDREKAARLGVSIQDINDTLSTALGGSYVNDFPEGGRVYDVVVQLPEDFRSSPEDIGQLYV--- 780
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 795 qsSNPELAFVPLGEVATISIEKGPNQINRESGKRNVVVTANVAGRDLASFVRDAQATMNAQLNLPSGYWLEYGGTFEQLQ 874
Cdd:pfam00873 781 --RNPYGKMIPLSAFAKIEWGYGPPSINRYNGFRSIVISGNVAAGDSLGDAMEAMAQIAKQVKLPPGYGYTWTGQFEQEQ 858
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 875 SASKRLSLVVPVTLLLIFGLLYSAFGSLRDSLIIFSGVPLALTGGVLALLLRDMPLSISAGVGFIALSGVAVLNGVVMLS 954
Cdd:pfam00873 859 LAGNSLPILIALALLVVFLVLAALYESWSDPLSIMLTVPLALVGALLALWLRGLPNSVYAQVGLILLIGLAVKNAILMVE 938
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 955 FIKQLR-NEGLSLYYAIHSGALQRLRPVLMTALVASLGFIPMALNTGTGAEIQRPLATVVVGGIMSSTLLTLLILPALYK 1033
Cdd:pfam00873 939 FANELReQEGKSLEEAILEACRLRLRPILMTALAAILGVLPLALSTGAGSELQQPLGIVVFGGLVTSTVLTLLVVPVFYV 1018
|
...
gi 1590405811 1034 LVH 1036
Cdd:pfam00873 1019 LFH 1021
|
|
| AcrB |
COG0841 |
Multidrug efflux pump subunit AcrB [Defense mechanisms]; |
4-1021 |
0e+00 |
|
Multidrug efflux pump subunit AcrB [Defense mechanisms];
Pssm-ID: 440603 [Multi-domain] Cd Length: 1015 Bit Score: 685.68 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 4 WIVSFAVKRRMMVLALTFLFAGFGVYNIQNLAVDAVPDITNVQVQINSKAPGFTPLEVEQRITYLVETAMAGIPKLDYTR 83
Cdd:COG0841 2 NLSRFFIRRPVAAIVLSLLILLAGLLAYLRLPVEQFPDIDPPTVTVSTTYPGASPEEVESTVTTPIEEALNGVEGIKYIT 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 84 SLSRYGLSQVTIIFDEGTDIYWARQQIGERIQSIRADLPNNVEPnlgPIasglgeIFTYSVHAKPD---ALKSDGMpySA 160
Cdd:COG0841 82 STSSEGSSSITVEFELGTDIDEALVDVQNAVDRARSDLPEDVEP---PG------VTKVNPSDFPVmvlALSSDDL--DE 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 161 EDLRTLQDWVIRPQLLKVKGVTEINSQGGFERQYQVAPIPEKLIAYKLTIKDVITALELNNSNRGAGYIERFDGQYLVRS 240
Cdd:COG0841 151 LELSDYAERNIKDRLERVPGVGQVQIFGGREREIRIWLDPDKLAAYGLTLADVANAIRAQNVDVPAGRIGGGDREYTVRT 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 241 PGQLKTLADIANTVIAKRDDAPVRIKDVANVYLGKELRTGAATYNGEETVLGTAMMLIGENSRVVAKAMADKLIQVQKSL 320
Cdd:COG0841 231 NGRLKTPEEFENIVIRTNDGSVVRLGDVARVEDGAEDYRSIARLNGKPAVGLAIQKQPGANALEVADAVRAKLEELQASL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 321 PAGVIVEPVYDRTNLVDKTIATVQKNLFEGAVLVIVILLLLLGNITGALITAMVIPLSML--FAITGMVGnrVSGNLMSL 398
Cdd:COG0841 311 PEGVELTIVYDQSEFIRASIEEVVKTLLEAILLVVLVVFLFLRSWRATLIPAVAIPVSLIgtFAVMYLLG--FSLNILTL 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 399 GAIDF--GLIVDGAVIVVENCLRQlgMAQHKhgrlltlsERLEVVTSATKEVFSPAVFGILIIMLVYLPLFALSGVEGKM 476
Cdd:COG0841 389 FALVLaiGIVVDDAIVVVENIERH--MEEGL--------SPLEAAIKGAREVAGAVIASTLTLVAVFLPLAFMGGITGQL 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 477 FQPMAFTVVAALIGALIFAVTFVPAAIAVFVRGKVDESE-------NAVMRGVKKIYKPLLNLSLKLPWLMISIATVLVL 549
Cdd:COG0841 459 FRQFALTVAIALLISLFVALTLTPALCARLLKPHPKGKKgrffrafNRGFDRLTRGYGRLLRWALRHRKLTLLVALALLA 538
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 550 VLGFKVKNMGAEFLPQLDEGDIAMHALRITGTGIEQSVQMQKQLEQALLAQPEIANVFSKIGTADVASDPmppNVADTFL 629
Cdd:COG0841 539 LSVLLFGRLPTEFFPEEDQGQIIVSVQLPPGTSLERTEAVVRQVEEILLEVPEVESVFSVVGFSGGGSGS---NSGTIFV 615
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 630 MLKPraqWPDPSLSKDALVQRIRHRVNEVPGNNYEFTQPIEMRFneliaGVRADVALRIYGDDLAILKQFGEKATSLMRN 709
Cdd:COG0841 616 TLKP---WDERDRSADEIIARLREKLAKIPGARVFVFQPPAGGL-----GSGAPIEVQLQGDDLEELAAAAEKLLAALRQ 687
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 710 ITGATDVRLEQMEGLPTLSVTPMRDHMALLGLTVNDIQQTLAAAVGGVQTGLIYEGDKRFSLLVRLDKRWSEDVSALARL 789
Cdd:COG0841 688 IPGLVDVRSDLQLGKPELQLDIDREKAAALGVTVADVASTLRAALGGRYVNDFNRGGREYDVRVQAPEEDRNSPEDLENL 767
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 790 PIALPQSsnpelAFVPLGEVATISIEKGPNQINRESGKRNVVVTANVA-GRDLASFVRDAQATMnAQLNLPSGYWLEYGG 868
Cdd:COG0841 768 YVRTPDG-----EMVPLSSVATIEEGTGPSSINRYNGQRSVTVSANLApGVSLGEALAAIEELA-AELKLPPGVSIEFTG 841
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 869 TFEQLQSASKRLSLVVPVTLLLIFGLLYSAFGSLRDSLIIFSGVPLALTGGVLALLLRDMPLSISAGVGFIALSGVAVLN 948
Cdd:COG0841 842 QAEEEQESFSSLGLAFLLALLLVYLVLAAQFESFIQPLIILLTVPLALIGALLGLLLTGTPLNIYSQIGLIMLIGIVVKN 921
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1590405811 949 GVVMLSFIKQLRNEGLSLYYAIHSGALQRLRPVLMTALVASLGFIPMALNTGTGAEIQRPLATVVVGGIMSST 1021
Cdd:COG0841 922 AILLVDFANQLREEGMSLREAILEAARLRLRPILMTSLATILGLLPLALGTGAGAEFRQPLGIAVIGGLLFST 994
|
|
| RND_permease_2 |
NF033617 |
multidrug efflux RND transporter permease subunit; |
10-1021 |
1.85e-123 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 411236 [Multi-domain] Cd Length: 1009 Bit Score: 402.09 E-value: 1.85e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 10 VKRRMMVLALTFLFAGFGVYNIQNLAVDAVPDITNVQVQINSKAPGFTPLEVEQRITYLVETAMAGIPKLDYTRSLSRYG 89
Cdd:NF033617 5 IKRPVATLLLSLLILLLGLLAFRKLPVREYPEVDFPTITVSTSYPGASPELMQSSITQPLEQQLAQIEGIDEMTSQSSLG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 90 LSQVTIIFDEGTDIYWARQQIGERIQSIRADLPNN-----VEPNLGPIASGLGEIftysvhakpdALKSDGMPYSAedLR 164
Cdd:NF033617 85 YSTITLQFRLGTDLDVALSEVQAAINAAQSLLPSEapdppVYRKANSADTPIMYI----------GLTSEEMPRGQ--LT 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 165 TLQDWVIRPQLLKVKGVTEINSQGGFERQYQVAPIPEKLIAYKLTIKDVITALELNNSNRGAGYIERFDGQYLVRSPGQL 244
Cdd:NF033617 153 DYAERVLAPKLSQINGVGSVDVSGGQRPAMRVWLDPEKMAARGLTADDVRSALNSNNVNSPKGAVRGDSVVSTVRANDQL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 245 KTLADIANTVIAKRDD-APVRIKDVANVYLGKELRTGAATYNGEETVLGTAMMLIGENSRVVAKAMADKLIQVQKSLPAG 323
Cdd:NF033617 233 KTAEDYEDLVIKYADNgAPVRLGDVATVELGAENVRNRAWANGVPAVVLGINRQPGANPIEVADEIRALLPELQETLPKN 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 324 VIVEPVYDRTNLVDKTIATVQKNLFEGAVLVIVILLLLLGNITGALITAMVIPLSMLFAITGMVGNRVSGNLMSLGA--I 401
Cdd:NF033617 313 IKVNVLYDRTRFIRASIDEVESTLLEAVALVILVVFLFLRNLRATLIPAVTVPLSLIGTFAVMYLFGFSINLLTLMAlvL 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 402 DFGLIVDGAVIVVENCLRQL--GMAQhkhgrlltlserLEVVTSATKEVFSPAVFGILIIMLVYLPLFALSGVEGKMFQP 479
Cdd:NF033617 393 AIGLVVDDAIVVVENIHRHIeeGESP------------LEAALKGAREIGFTVIAMTLTLVAVYLPILFMGGLTGRLFRE 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 480 MAFTVVAALIGALIFAVTFVPAAIAVFVRGKVDESENA-----VMRGVKKIYKPLLNLSLKLPWLMISIA--TVLVLVLG 552
Cdd:NF033617 461 FAVTLAGAVIISGIVALTLTPMMCSRLLKANEKPGRFAravdrFFDGLTARYGRGLKWVLKHRPLTLVVAlaTLALLPLL 540
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 553 FKVknMGAEFLPQLDEGDIAMHALRITGTGIEQSVQMQKQLEQALLAQPEIANVFSKIGTADVASDpmppNVADTFLMLK 632
Cdd:NF033617 541 YVF--IPKELAPSEDRGVIFGMIQAPQSISLDYMSAKMRDVEKILSSDPEVQSLTSFNGVGGNPGD----NTGFGIINLK 614
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 633 PraqWPDPSLSKDALVQRIRHRVNEVPGnnyefTQPIEMRFNELIAGVRADVALRIY---GDDLAILKQFGEKATSLMRN 709
Cdd:NF033617 615 P---WDERDVSAQEIIDRLRPKLAKVPG-----MDLFLFPLQDLPGGAGSSLPQYQVtltPSDYDSLFTWAEKLKEKLRK 686
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 710 ITGATDVRLEQMEGLPTLSVTPMRDHMALLGLTVNDIQQTLAAAVGGVQTGLIYEGDKRFSLLVRLDKRWSEDVSALARL 789
Cdd:NF033617 687 SPQFADVDSDLQDKGPELNVDIDRDKAARLGISMQDIGSTLEVAFGQRQVNTIYTDGNQYKVVLEVDRRYRLNPEALNQI 766
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 790 PIalpQSSNPELafVPLGEVATISIEKGPNQINRESGKRNVVVTANVA-GRDLASFVrdaQATMN-AQLNLPSGYWLEYG 867
Cdd:NF033617 767 YV---RSNDGKL--VPLSTLAKIEERAAPLSLNHFNQFNSATLSFNLApGVSLGEAI---EALDQaAKELLPSGISGSFQ 838
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 868 GTFEQLQSASKRLSLVVPVTLLLIFGLLYSAFGSLRDSLIIFSGVPLALTGGVLALLLRDMPLSISAGVGFIALSGVAVL 947
Cdd:NF033617 839 GAARAFQEEGSSLLFLFLLALAAIYLVLAIQYESFVDPLTILSTVPLAGCGALLALALGGQSMNIYAQIGLITLIGLVKK 918
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1590405811 948 NGVVMLSFIKQL-RNEGLSLYYAIHSGALQRLRPVLMTALVASLGFIPMALNTGTGAEIQRPLATVVVGGIMSST 1021
Cdd:NF033617 919 NGILMVEFANELqRHQGLSRREAIYQAAALRLRPILMTTLAMLLGAIPLMLSTGAGAESRFPLGIVIVGGLGVGT 993
|
|
| 2A0602 |
TIGR00915 |
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Proteins ... |
16-1044 |
1.01e-81 |
|
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate]
Pssm-ID: 273335 [Multi-domain] Cd Length: 1044 Bit Score: 287.78 E-value: 1.01e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 16 VLALTFLFAGfgVYNIQNLAVDAVPDITNVQVQINSKAPGFTPLEVEQRITYLVETAMAGIPKLDYTRSLSRY-GLSQVT 94
Cdd:TIGR00915 14 VIAIIIMLAG--TLSILSLPVSQYPSIAPPAITVSASYPGASAQTVQDTVTQVIEQNMNGIDGLRYMSSSSDSdGSMTIT 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 95 IIFDEGTDIYWARQQIGERIQSIRADLPNNVEpNLGPIASGLGEIFTYSVhakpdALKSDGMPYSAEDLRTLQDWVIRPQ 174
Cdd:TIGR00915 92 LTFEQGTDPDIAQVQVQNKLQLATPLLPQEVQ-RQGVRVEKASSNFLMVI-----GLVSDDGSMTKEDLSDYAASNMVDP 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 175 LLKVKGVTEINSQGGfERQYQVAPIPEKLIAYKLTIKDVITALELNNSNRGAGYI---ERFDGQYL---VRSPGQLKTLA 248
Cdd:TIGR00915 166 LSRLEGVGDVQLFGS-QYAMRIWLDPAKLNSYQLTPADVISAISAQNAQISAGQLgglPAVPGQQLnatIIAQTRLQTPE 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 249 DIANTVI-AKRDDAPVRIKDVANVYLGKELRTGAATYNGEETVlGTAMML-IGENSRVVAKAMADKLIQVQKSLPAGVIV 326
Cdd:TIGR00915 245 QFENILLkVNTDGSQVRLKDVARVELGGENYSISARFNGKPAS-GLAIKLaTGANALDTAKAVKAELAVLEPFFPQGMKY 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 327 EPVYDRTNLVDKTIATVQKNLFEGAVLVIVILLLLLGNITGALITAMVIPLSML--FAITGMVGNRVSGNLMSLGAIDFG 404
Cdd:TIGR00915 324 VYPYDTTPFVEASIEEVVHTLIEAIVLVFLVMYLFLQNFRATLIPTIAVPVVLLgtFAVLAAFGFSINTLTMFAMVLAIG 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 405 LIVDGAVIVVENCLRqlgmaqhkhgrllTLSERLEVVTSATKEVF---SPAVFGI-LIIMLVYLPLFALSGVEGKMFQPM 480
Cdd:TIGR00915 404 LLVDDAIVVVENVER-------------VMAEEGLPPKEATRKSMgqiQGALVGIaMVLSAVFVPMAFFGGSTGAIYRQF 470
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 481 AFTVVAALIGALIFAVTFVPAAIAVFVRG-------------------KVDESENAVMRGVKKIykpllnLSLKLPWLMI 541
Cdd:TIGR00915 471 SITIVSAMALSVLVALILTPALCATMLKPiekgehhekkggffgwfnrMFDSSTHGYENGVGKI------LRRRGRYLLV 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 542 SIatVLVLVLGFKVKNMGAEFLPQLDEGDIAMHALRITGTGIEQSVQMQKQLEQALLAQP--EIANVFSKIGTADVASDp 619
Cdd:TIGR00915 545 YV--LLVGGMVFLFVRLPTSFLPDEDQGVFMTIVQLPAGATAERTQAVLAQVTKYLLAKEkaNVESVFTVNGFSFAGRG- 621
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 620 mpPNVADTFLMLKPRAQWPDPSLSKDALVQRIRHRVNEVP-GNNYEFTQPiemRFNELIAGVRADVALRIY-GDDLAILK 697
Cdd:TIGR00915 622 --QNMGMAFIRLKDWEERTGKENSVFAIAGRATGHFMQIKdAMVIAFVPP---AILELGNATGFDFFLQDRaGLGHEALL 696
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 698 QFGEKATSLMRNITGATDVRLEQMEGLPTLSVTPMRDHMALLGLTVNDIQQTLAAAVGGVQTG-LIYEGD-KRFSLLVRL 775
Cdd:TIGR00915 697 QARNQLLGLAAQNPALTRVRPNGLEDEPQLKIDIDREKAQALGVSIADINTTLSTAWGSSYVNdFIDRGRvKRVYVQAEE 776
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 776 DKRWSEDVSALARLPIALPQssnpelaFVPLGEVATISIEKGPNQINRESGKRNVVVTANVAGRDLASFVRDAQATMNAQ 855
Cdd:TIGR00915 777 DARMSPEDINKWYVRNASGE-------MVPFSAFATVRWEYGSPQLERYNGLPSMEILGSAAPGVSTGQAMAAMEAIAQK 849
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 856 lnLPSGYWLEYGG-TFEQLQSASKRLSLVVpVTLLLIFGLLYSAFGSLRDSLIIFSGVPLALTGGVLALLLRDMPLSISA 934
Cdd:TIGR00915 850 --LPPGFGFSWTGmSYEERLSGSQAPALYA-LSLLVVFLCLAALYESWSIPVSVMLVVPLGIIGALLATTLRGLSNDVYF 926
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 935 GVGFIALSGVAVLNGVVMLSFIKQLRNEGLSLYYAIHSGALQRLRPVLMTALVASLGFIPMALNTGTGAEIQRPLATVVV 1014
Cdd:TIGR00915 927 QVGLLTTIGLSAKNAILIVEFAKELMAQGKSIVEAALEAARLRLRPILMTSLAFILGVVPLAISTGAGSGSQHAIGTGVF 1006
|
1050 1060 1070
....*....|....*....|....*....|
gi 1590405811 1015 GGIMSSTLLTLLILPALYKLVHGKFKKQQT 1044
Cdd:TIGR00915 1007 GGMVTATVLAIFFVPLFYVVVRRLFKRKAH 1036
|
|
| PRK09577 |
PRK09577 |
multidrug efflux RND transporter permease subunit; |
16-1021 |
2.20e-64 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169981 [Multi-domain] Cd Length: 1032 Bit Score: 236.67 E-value: 2.20e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 16 VLALTFLFAGfgVYNIQNLAVDAVPDITNVQVQINSKAPGFTPLEVEQRITYLVETAMAGIPKLDYTRSLSRYGLSQVTI 95
Cdd:PRK09577 14 VISLFIMLGG--IFAIRALPVAQYPDIAPPVVSIYATYPGASAQVVEESVTALIEREMNGAPGLLYTSATSSAGQASLSL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 96 IFDEGTDIYWARQQIGERIQSIRADLPNNVEPNlGPIASGLGEIFTYSVhakpdALKSDGMPYSAEDLRTLQDWVIRPQL 175
Cdd:PRK09577 92 TFKQGVNADLAAVEVQNRLKTVEARLPEPVRRD-GIQVEKAADNIQLIV-----SLTSDDGRLTGVELGEYASANVLQAL 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 176 LKVKGVTEINSQGGfERQYQVAPIPEKLIAYKLTIKDVITALELNNSNRGAGYIERF---DGQYL---VRSPGQLKTLAD 249
Cdd:PRK09577 166 RRVEGVGKVQFWGA-EYAMRIWPDPVKLAALGLTASDIASAVRAHNARVTIGDIGRSavpDSAPIaatVFADAPLKTPED 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 250 IANTVI-AKRDDAPVRIKDVANVYLGKELRTGAATYNGEETVLGTAMMLIGENSRVVAKAMADKLIQVQKSLPAGVIVEP 328
Cdd:PRK09577 245 FGAIALrARADGSALYLRDVARIEFGGNDYNYPSYVNGKTATGMGIKLAPGSNAVATEKRVRATMDELSRYFPPGVKYQI 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 329 VYDRTNLVDKTIATVQKNLFEGAVLVIVILLLLLGNITGALITAMVIPLSMLFAITGMVGNRVSGNLMSL--GAIDFGLI 406
Cdd:PRK09577 325 PYETSSFVRVSMNKVVTTLIEAGVLVFLVMFLFMQNFRATLIPTLVVPVALLGTFGVMLAAGFSINVLTMfgMVLAIGIL 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 407 VDGAVIVVENCLRqlgmaqhkhgrlLTLSERL---EVVTSATKEVfSPAVFGILIIML-VYLPLFALSGVEGKMFQPMAF 482
Cdd:PRK09577 405 VDDAIVVVENVER------------LMVEEGLspyDATVKAMKQI-SGAIVGITVVLTsVFVPMAFFGGAVGNIYRQFAL 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 483 TVVAALIGALIFAVTFVPAAIAVFVRGKVDESEN----------AVMRGVKKiYKPLLNLSLKLP--WLMISIATVLVLV 550
Cdd:PRK09577 472 SLAVSIGFSAFLALSLTPALCATLLKPVDGDHHEkrgffgwfnrFVARSTQR-YATRVGAILKRPlrWLVVYGALTAAAA 550
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 551 LGFkvKNMGAEFLPQLDEGDIAMHALRITGTGIEQSVQMQKQLEQALLAQPEIANVFSkIGTADVASDpmPPNVADTFLM 630
Cdd:PRK09577 551 LLF--TRLPTAFLPDEDQGNFMVMVIRPQGTPLAETMQSVREVESYLRRHEPVAYTFA-LGGFNLYGE--GPNGGMIFVT 625
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 631 LKPRAQWPDPSLSKDALVQRIRHRVNEVPGNN-YEFTQPiemRFNELIAGVRADVALRIYGD-DLAILKQFGEKATSLMR 708
Cdd:PRK09577 626 LKDWKERKAARDHVQAIVARINERFAGTPNTTvFAMNSP---ALPDLGSTSGFDFRLQDRGGlGYAAFVAAREQLLAEGA 702
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 709 NITGATDVRLEQMEGLPTLSVTPMRDHMALLGLTVNDIQQTLAAAVGGVQTGLIYEGDKRFSLLVRLDKRWSEDVSALAR 788
Cdd:PRK09577 703 KDPALTDLMFAGTQDAPQLKLDIDRAKASALGVSMDEINTTLAVMFGSDYIGDFMHGSQVRRVIVQADGRHRLDPDDVKK 782
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 789 LPIalpQSSNPELafVPLGEVATISIEKGPNQINRESGKRNVVVTANVA-----GRDLASFVRDAQatmnaqlNLPSGYW 863
Cdd:PRK09577 783 LRV---RNAQGEM--VPLAAFATLHWTLGPPQLTRYNGYPSFTINGSAApghssGEAMAAIERIAA-------TLPAGIG 850
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 864 LEYGGtfeqlQSASKRLS-----LVVPVTLLLIFGLLYSAFGSLRDSLIIFSGVPLALTGGVLALLLRDMPLSISAGVGF 938
Cdd:PRK09577 851 YAWSG-----QSFEERLSgaqapMLFALSVLVVFLALAALYESWSIPFAVMLVVPLGVIGAVLGVTLRGMPNDIYFKVGL 925
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 939 IALSGVAVLNGVVMLSFIKQLRNEGLSLYYAIHSGALQRLRPVLMTALVASLGFIPMALNTGTGAEIQRPLATVVVGGIM 1018
Cdd:PRK09577 926 IATIGLSAKNAILIVEVAKDLVAQRMSLADAALEAARLRLRPIVMTSLAFGVGVLPLAFASGAASGAQIAIGTGVLGGVI 1005
|
...
gi 1590405811 1019 SST 1021
Cdd:PRK09577 1006 TAT 1008
|
|
| PRK10555 |
PRK10555 |
multidrug efflux RND transporter permease AcrD; |
7-1039 |
2.39e-63 |
|
multidrug efflux RND transporter permease AcrD;
Pssm-ID: 182544 [Multi-domain] Cd Length: 1037 Bit Score: 233.57 E-value: 2.39e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 7 SFAVKRRMMVLALTFLFAGFGVYNIQNLAVDAVPDITNVQVQINSKAPGFTPLEVEQRITYLVETAMAGIPKLDYTRSLS 86
Cdd:PRK10555 3 NFFIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRITANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSSQS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 87 RY-GLSQVTIIFDEGTDIYWARQQIGERIQSIRADLPNNVEpNLGPIASGLGE--IFTYSVhakpdaLKSDGmpysAEDL 163
Cdd:PRK10555 83 SGtGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQAVQ-NQGVTVRKTGDtnILTIAF------VSTDG----SMDK 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 164 RTLQDWV---IRPQLLKVKGVTEINSQGGferQY--QVAPIPEKLIAYKLTIKDVITALELNNSNRGAGYI--------- 229
Cdd:PRK10555 152 QDIADYVasnIQDPLSRVNGVGDIDAYGS---QYsmRIWLDPAKLNSFQMTTKDVTDAIESQNAQIAVGQLggtpsvdkq 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 230 ---ERFDGQYLVRSPGQLKTLadianTVIAKRDDAPVRIKDVANVYLGKELRTGAATYNGEETVLGTAMMLIGENSRVVA 306
Cdd:PRK10555 229 alnATINAQSLLQTPEQFRDI-----TLRVNQDGSEVTLGDVATVELGAEKYDYLSRFNGKPASGLGVKLASGANEMATA 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 307 KAMADKLIQVQKSLPAGVIVEPVYDRTNLVDKTIATVQKNLFEGAVLVIVILLLLLGNITGALITAMVIPLSML--FAIT 384
Cdd:PRK10555 304 KLVLNRLDELAQYFPHGLEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMgtFSVL 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 385 GMVGNRVSGNLMSLGAIDFGLIVDGAVIVVENCLRQlgMAQHKhgrlltLSERlevvtSATKEVFSP---AVFGI-LIIM 460
Cdd:PRK10555 384 YAFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERI--MSEEG------LTPR-----EATRKSMGQiqgALVGIaMVLS 450
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 461 LVYLPLFALSGVEGKMFQPMAFTVVAALIGALIFAVTFVPAAIAVFVR--------GK----------VDESENAVMRGV 522
Cdd:PRK10555 451 AVFVPMAFFGGTTGAIYRQFSITIVSAMVLSVLVAMILTPALCATLLKplkkgehhGQkgffgwfnrmFNRNAERYEKGV 530
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 523 KKIykpllnLSLKLPWLMISIATVLVLVLGFkvKNMGAEFLPQLDEGDIAMHALRITGTGIEQSVQMQKQLEQALLAQPE 602
Cdd:PRK10555 531 AKI------LHRSLRWILIYVLLLGGMVFLF--LRLPTSFLPLEDRGMFTTSVQLPSGSTQQQTLKVVEKVEKYYFTHEK 602
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 603 --IANVFSKIGTADVASDpmpPNVADTFLMLKPRAQWPDPSLSKDALVQRIR---HRVNEVP------------GNNYEF 665
Cdd:PRK10555 603 dnVMSVFATVGSGPGGNG---QNVARMFIRLKDWDERDSKTGTSFAIIERATkafNKIKEARviassppaisglGSSAGF 679
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 666 TQPIEMRFNeliAGVRADVALRiygddlAILKQFGEKATSLMRnitgatdVRLEQMEGLPTLSVTPMRDHMALLGLTVND 745
Cdd:PRK10555 680 DMELQDHAG---AGHDALMAAR------NQLLALAAKNPELTR-------VRHNGLDDSPQLQIDIDQRKAQALGVSIDD 743
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 746 IQQTLAAAVGGVqtgliYEGDkrFSLLVRLDKRWSEDVSALARLP--IALPQSSNPELAFVPLGEVATISIEKGPNQINR 823
Cdd:PRK10555 744 INDTLQTAWGSS-----YVND--FMDRGRVKKVYVQAAAPYRMLPddINLWYVRNKDGGMVPFSAFATSRWETGSPRLER 816
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 824 ESGKRNVVVTANVAGRDLASFVRDAQATMNAQlnLPSGYWLEYGGTFEQLQSASKRLSLVVPVTLLLIFGLLYSAFGSLR 903
Cdd:PRK10555 817 YNGYSAVEIVGEAAPGVSTGTAMDIMESLVKQ--LPNGFGLEWTAMSYQERLSGAQAPALYAISLLVVFLCLAALYESWS 894
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 904 DSLIIFSGVPLALTGGVLALLLRDMPLSISAGVGFIALSGVAVLNGVVMLSFIKQLRNEGLSLYYAIHSGALQRLRPVLM 983
Cdd:PRK10555 895 VPFSVMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNQKGHDLFEATLHASRQRLRPILM 974
|
1050 1060 1070 1080 1090
....*....|....*....|....*....|....*....|....*....|....*.
gi 1590405811 984 TALVASLGFIPMALNTGTGAEIQRPLATVVVGGIMSSTLLTLLILPALYKLVHGKF 1039
Cdd:PRK10555 975 TSLAFIFGVLPMATSTGAGSGSQHAVGTGVMGGMISATILAIFFVPLFFVLVRRRF 1030
|
|
| PRK10614 |
PRK10614 |
multidrug efflux system subunit MdtC; Provisional |
27-1020 |
3.97e-58 |
|
multidrug efflux system subunit MdtC; Provisional
Pssm-ID: 182589 [Multi-domain] Cd Length: 1025 Bit Score: 217.67 E-value: 3.97e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 27 GVYNIQNLAVDAVPDITNVQVQINSKAPGFTPLEVEQRITYLVETAMAGIPKLDYTRSLSRYGLSQVTIIFDEGTDIYWA 106
Cdd:PRK10614 25 GILGFRLLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVNEMTSSSSLGSTRIILQFDFDRDINGA 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 107 RQQIGERIQSIRADLPNN---------VEPNLGPIAsglgeIFTysvhakpdaLKSDgmPYSAEDLRTLQDWVIRPQLLK 177
Cdd:PRK10614 105 ARDVQAAINAAQSLLPSGmpsrptyrkANPSDAPIM-----ILT---------LTSD--TYSQGQLYDFASTQLAQTISQ 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 178 VKGVTEINSQGGFERQYQVAPIPEKLIAYKLTIKDVITALELNNSNRGAGYIERFDGQYLVRSPGQLKTLADIANTVIAK 257
Cdd:PRK10614 169 IDGVGDVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRQAISNANVRRPQGAVEDGTHRWQIQTNDELKTAAEYQPLIIHY 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 258 RDDAPVRIKDVANVYLGKELRTGAATYNGEETVLGTAMMLIGENSRVVAKAMADKLIQVQKSLPAGVIVEPVYDRTNLVD 337
Cdd:PRK10614 249 NNGAAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDRIRAKLPELRETIPAAIDLQIAQDRSPTIR 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 338 KTIATVQKNLFEGAVLVIVILLLLLGNITGALITAMVIPLSMLFAITGMVGNRVSGNLMSLGA--IDFGLIVDGAVIVVE 415
Cdd:PRK10614 329 ASLEEVEQTLAISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTFAAMYLCGFSLNNLSLMAltIATGFVVDDAIVVLE 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 416 NCLRQL--GMaqhkhgrlltlsERLEVVTSATKEVFSPAVFGILIIMLVYLPLFALSGVEGKMFQPMAFTVVAALIGALI 493
Cdd:PRK10614 409 NISRHLeaGM------------KPLQAALQGVREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLFREFAVTLSVAIGISLL 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 494 FAVTFVPAAIAVFVRGKVDESE----------NAVMRGVKKIYKPLLNLSlklPWLMISIATVLVLVLGFKVkNMGAEFL 563
Cdd:PRK10614 477 VSLTLTPMMCAWLLKSSKPREQkrlrgfgrmlVALQQGYGRSLKWVLNHT---RWVGVVLLGTIALNVWLYI-SIPKTFF 552
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 564 PQLDEGdiamhalRITGtGI--EQSVQMQ------KQLEQALLAQPEIANVFSKIGTADVASDPMppnvadtFLMLKPRA 635
Cdd:PRK10614 553 PEQDTG-------RLMG-FIqaDQSISFQamrgklQDFMKIIRDDPAVDNVTGFTGGSRVNSGMM-------FITLKPLS 617
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 636 QWPDpslSKDALVQRIRHRVNEVPGNNYeFTQPIEmrfnELIAGVRADVALRIY---GDDLAILKQFGEKATSLMRNITG 712
Cdd:PRK10614 618 ERSE---TAQQVIDRLRVKLAKEPGANL-FLMAVQ----DIRVGGRQSNASYQYtllSDDLAALREWEPKIRKALAALPE 689
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 713 ATDVRLEQMEGLPTLSVTPMRDHMALLGLTVNDIQQTLAAAVGGVQTGLIYEGDKRFSLLVRLDKRWSEDVSALARLPIA 792
Cdd:PRK10614 690 LADVNSDQQDKGAEMALTYDRDTMARLGIDVQAANSLLNNAFGQRQISTIYQPLNQYKVVMEVDPRYTQDISALEKMFVI 769
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 793 lpqssNPELAFVPLGEVATISIEKGPNQINRESGKRNVVVTANVA-GRDLASFVRDAQATMnAQLNLPSGYWLEYGGT-- 869
Cdd:PRK10614 770 -----NNEGKAIPLSYFAKWQPANAPLSVNHQGLSAASTISFNLPtGKSLSDASAAIERAM-TQLGVPSTVRGSFAGTaq 843
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 870 -FEQLQSASKRLSLVVPVTLLLIFGLLYSafgSLRDSLIIFSGVPLALTGGVLALLLRDMPLSISAGVGFIALSGVAVLN 948
Cdd:PRK10614 844 vFQETMNSQLILILAAIATVYIVLGILYE---SYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKN 920
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1590405811 949 GVVMLSF-IKQLRNEGLSLYYAIHSGALQRLRPVLMTALVASLGFIPMALNTGTGAEIQRPLATVVVGGIMSS 1020
Cdd:PRK10614 921 AIMMVDFaLEAQRNGNLTAQEAIFQACLLRFRPIMMTTLAALFGALPLVLSGGDGAELRQPLGITIVGGLVMS 993
|
|
| PRK09579 |
PRK09579 |
multidrug efflux RND transporter permease subunit; |
15-1045 |
7.63e-56 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169983 [Multi-domain] Cd Length: 1017 Bit Score: 210.85 E-value: 7.63e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 15 MVLALTFLFAGFGVYNiqNLAVDAVPDITNVQVQINSKAPGFTPLEVEQRITYLVETAMAGIPKLDYTRSLSRYGLSQVT 94
Cdd:PRK09579 15 SVVSLLIVLLGFQAWS--KLQIRQYPQMENALITVTTAYPGANAETIQGYITQPLQQSLASAEGIDYMTSVSRQNFSIIS 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 95 IIFDEGTDIYWARQQIGERIQSIRADLPNNVE-PNLGPIASglgeiftysvhakpDALKSDGMPYSAEDLRTLQ--DW-- 169
Cdd:PRK09579 93 IYARIGADSDRLFTELLAKANEVKNQLPQDAEdPVLSKEAA--------------DASALMYISFYSEEMSNPQitDYls 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 170 -VIRPQLLKVKGVTEINSQGGFERQYQVAPIPEKLIAYKLTIKDVITALELNNSNRGAGYIErfdGQYLVRS---PGQLK 245
Cdd:PRK09579 159 rVIQPKLATLPGMAEAEILGNQVFAMRLWLDPVKLAGFGLSAGDVTQAVRRYNFLSAAGEVK---GEYVVTSinaSTELK 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 246 TLADIANTVIAKRDDAPVRIKDVANVYLGKELRTGAATYNGEETVLGTAMMLIGENSRVVAKAMADKLIQVQKSLPAGVI 325
Cdd:PRK09579 236 SAEAFAAIPVKTSGDSRVLLGDVARVEMGAENYDSISSFDGIPSVYIGIKATPSANPLDVIKEVRAIMPELESQLPPNLK 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 326 VEPVYDRTNLVDKTIATVQKNLFEGAVLVIVILLLLLGNITGALITAMVIPLSMLFAITGMVGNRVSGNLMSLGA--IDF 403
Cdd:PRK09579 316 VSIAYDATLFIQASIDEVVKTLGEAVLIVIVVVFLFLGALRSVLIPVVTIPLSMIGVLFFMQMMGYSINLLTLLAmvLAI 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 404 GLIVDGAVIVVENCLRQLgmaqhKHGRlltlsERLEVVTSATKEVFSPAVFGILIIMLVYLPLFALSGVEGKMFQPMAFT 483
Cdd:PRK09579 396 GLVVDDAIVVVENIHRHI-----EEGK-----SPFDAALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALT 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 484 VVAALIGALIFAVTFVPAAIAVFVRGKVDESENA-----VMRGVKKIYKPLLNLSLKLPWLMISIATVLVLVLGFKVKNM 558
Cdd:PRK09579 466 LAGAVIISGIVALTLSPMMCALLLRHEENPSGLAhrldrLFERLKQRYQRALHGTLNTRPVVLVFAVIVLALIPVLLKFT 545
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 559 GAEFLPQLDEGDIAMHALRITGTGIEQSVQMQKQLEQALLAQPEIANVFSKIGTADVASDpmppnvADTFLmLKPraqWP 638
Cdd:PRK09579 546 QSELAPEEDQGIIFMMSSSPQPANLDYLNAYTDEFTPIFKSFPEYYSSFQINGFNGVQSG------IGGFL-LKP---WN 615
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 639 DPSLSKDALVQRIRHRVNEVPG-NNYEFTQPIEMRFNEliaGVRADVALRIYGDDLAILkQFGEKATSLMRNITGATDVR 717
Cdd:PRK09579 616 ERERTQMELLPLVQAKLEEIPGlQIFGFNLPSLPGTGE---GLPFQFVINTANDYESLL-QVAQRVKQRAQESGKFAFLD 691
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 718 LEQMEGLPTLSVTPMRDHMALLGLTVNDIQQTLAAAVGgvqtgliyEGD-KRFSLLVRLDKRWSEDVSALARLPIALPQ- 795
Cdd:PRK09579 692 IDLAFDKPEVVVDIDRAKAAQMGVSMQDLGGTLATLLG--------EGEiNRFTIDGRSYKVIAQVERPYRDNPGWLNNy 763
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 796 -SSNPELAFVPLGEVATISIEKGPNQINrESGKRNVVVTANVAGRDLASFVRDAQATmnAQLNLPSGYWLEYGGTFEQLQ 874
Cdd:PRK09579 764 yVKNEQGQLLPLSTLITLSDRARPRQLN-QFQQLNSAIISGFPIVSMGEAIETVQQI--AREEAPEGFAFDYAGASRQYV 840
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 875 SASKRLSLVVPVTLLLIFGLLYSAFGSLRDSLIIFSGVPLALTGGVLALLLRDMPLSISAGVGFIALSGVAVLNGVVMLS 954
Cdd:PRK09579 841 QEGSALWVTFGLALAIIFLVLAAQFESFRDPLVILVTVPLSICGALIPLFLGVSSMNIYTQVGLVTLIGLISKHGILIVE 920
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 955 FIKQLRNE-GLSLYYAIHSGALQRLRPVLMTALVASLGFIPMALNTGTGAEIQRPLATVVVGGIMSSTLLTLLILPALYK 1033
Cdd:PRK09579 921 FANQLRHEqGLSRREAIEEAAAIRLRPVLMTTAAMVFGMVPLILATGAGAVSRFDIGLVIATGMSIGTLFTLFVLPCIYT 1000
|
1050
....*....|..
gi 1590405811 1034 LVHGKFKKQQTA 1045
Cdd:PRK09579 1001 LLAKPDAAPGVA 1012
|
|
| PRK10503 |
PRK10503 |
MdtB/MuxB family multidrug efflux RND transporter permease subunit; |
16-1020 |
4.14e-51 |
|
MdtB/MuxB family multidrug efflux RND transporter permease subunit;
Pssm-ID: 182501 [Multi-domain] Cd Length: 1040 Bit Score: 196.10 E-value: 4.14e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 16 VLALTFLFAGFGVYNIqnLAVDAVPDITNVQVQINSKAPGFTPLEVEQRITYLVETAMAGIPKLDYTRSLSRYGLSQVTI 95
Cdd:PRK10503 25 LLMVAILLAGIIGYRA--LPVSALPEVDYPTIQVVTLYPGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSGGASVITL 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 96 IFDEGTDIYWARQQIGERIQSIRADLPNNVePNLgPIASGLGE----IFTYSVhakpdalKSDGMPysaedLRTLQDWV- 170
Cdd:PRK10503 103 QFQLTLPLDVAEQEVQAAINAATNLLPSDL-PNP-PVYSKVNPadppIMTLAV-------TSTAMP-----MTQVEDMVe 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 171 --IRPQLLKVKGVTEINSQGGFERQYQVAPIPEKLIAYKLTIKDVITALELNNSNRGAGYIERFDGQYLVRSPGQLKTLA 248
Cdd:PRK10503 169 trVAQKISQVSGVGLVTLSGGQRPAVRVKLNAQAIAALGLTSETVRTAITGANVNSAKGSLDGPTRAVTLSANDQMQSAE 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 249 DIANTVIAKRDDAPVRIKDVANVYLGKELRTGAATYNGEETVLGTAMMLIGENSRVVAKAMADKLIQVQKSLPAGVIVEP 328
Cdd:PRK10503 249 EYRQLIIAYQNGAPIRLGDVATVEQGAENSWLGAWANKQQAIVMNVQRQPGANIIATADSIRQMLPQLTESLPKSVKVTV 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 329 VYDRTNLVDKTIATVQKNLFEGAVLVIVILLLLLGNITGALITAMVIPLSML--FAITGMVGNRVSG-NLMSLgAIDFGL 405
Cdd:PRK10503 329 LSDRTTNIRASVDDTQFELMLAIALVVMIIYLFLRNIPATIIPGVAVPLSLIgtFAVMVFLDFSINNlTLMAL-TIATGF 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 406 IVDGAVIVVENCLRQLgmaqhkhgrlltlsERLEV-VTSATKevfSPAVFGILIIML------VYLPLFALSGVEGKMFQ 478
Cdd:PRK10503 408 VVDDAIVVIENISRYI--------------EKGEKpLAAALK---GAGEIGFTIISLtfsliaVLIPLLFMGDIVGRLFR 470
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 479 PMAFTV-VAALIGALIfAVTFVPAAIAVFVRGKVDESENAVMRGVKK-------IYKPLLNLSLKLPWLMISIA--TVLV 548
Cdd:PRK10503 471 EFAVTLaVAILISAVV-SLTLTPMMCARMLSQESLRKQNRFSRASERmfdrviaAYGRGLAKVLNHPWLTLSVAlsTLLL 549
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 549 LVLGFKVKNMGaeFLPQLDEGDIAMHALRITGTGIEQSVQMQKQLEQALLAQPEIANVFSKIGTadvasDPMPP--NVAD 626
Cdd:PRK10503 550 TVLLWIFIPKG--FFPVQDNGIIQGTLQAPQSSSFANMAQRQRQVADVILQDPAVQSLTSFVGV-----DGTNPslNSAR 622
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 627 TFLMLKPRAQWPDpslSKDALVQRIRHRVNEVPGNNYeFTQPIE-MRFNELIAgvRADVALRIYGDDLAILKQFGEKATS 705
Cdd:PRK10503 623 LQINLKPLDERDD---RVQKVIARLQTAVAKVPGVDL-YLQPTQdLTIDTQVS--RTQYQFTLQATSLDALSTWVPKLME 696
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 706 LMRNITGATDVRLEQMEGLPTLSVTPMRDHMALLGLTVNDIQQTLAAAVGGVQTGLIYEGDKRFSLLVRLDKRWSEDVSA 785
Cdd:PRK10503 697 KLQQLPQLSDVSSDWQDKGLVAYVNVDRDSASRLGISMADVDNALYNAFGQRLISTIYTQANQYRVVLEHNTENTPGLAA 776
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 786 LARlpIALPQSSNpelAFVPLGEVATISIEKGPNQINRESGKRNVVVTANVAgrDLASFVRDAQATMNAQ--LNLPSGYW 863
Cdd:PRK10503 777 LDT--IRLTSSDG---GVVPLSSIATIEQRFGPLSINHLDQFPSTTISFNVP--DGYSLGDAVQAIMDTEktLNLPADIT 849
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 864 LEYGGTFEQLQSA-SKRLSLVVP--VTLLLIFGLLYSAFgslRDSLIIFSGVPLALTGGVLALLLRDMPLSISAGVGFIA 940
Cdd:PRK10503 850 TQFQGSTLAFQSAlGSTVWLIVAavVAMYIVLGVLYESF---IHPITILSTLPTAGVGALLALMIAGSELDVIAIIGIIL 926
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 941 LSGVAVLNGVVMLSF-IKQLRNEGLSLYYAIHSGALQRLRPVLMTALVASLGFIPMALNTGTGAEIQRPLATVVVGGIMS 1019
Cdd:PRK10503 927 LIGIVKKNAIMMIDFaLAAEREQGMSPRDAIYQACLLRFRPILMTTLAALLGALPLMLSTGVGAELRRPLGICMVGGLIV 1006
|
.
gi 1590405811 1020 S 1020
Cdd:PRK10503 1007 S 1007
|
|
| PRK15127 |
PRK15127 |
multidrug efflux RND transporter permease subunit AcrB; |
16-1042 |
3.59e-50 |
|
multidrug efflux RND transporter permease subunit AcrB;
Pssm-ID: 185081 [Multi-domain] Cd Length: 1049 Bit Score: 193.20 E-value: 3.59e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 16 VLALTFLFAGfgVYNIQNLAVDAVPDITNVQVQINSKAPGFTPLEVEQRITYLVETAMAGIPKLDYTRSLS-RYGLSQVT 94
Cdd:PRK15127 14 VIAIIIMLAG--GLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSdSTGTVQIT 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 95 IIFDEGTDIYWARQQIGERIQSIRADLPNNVEpnlgpiASGLGEIFTYSVHAKPDALKSDGMPYSAEDLRTLQDWVIRPQ 174
Cdd:PRK15127 92 LTFESGTDADIAQVQVQNKLQLAMPLLPQEVQ------QQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAANMKDP 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 175 LLKVKGVTEINSqggFERQY--QVAPIPEKLIAYKLTIKDVITALELNNSNRGAGyieRFDGQYLVrsPGQLKTLADIAN 252
Cdd:PRK15127 166 ISRTSGVGDVQL---FGSQYamRIWMNPNELNKFQLTPVDVINAIKAQNAQVAAG---QLGGTPPV--KGQQLNASIIAQ 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 253 TVIA------------KRDDAPVRIKDVANVYLGKELRTGAATYNGEETVLGTAMMLIGENSRVVAKAMADKLIQVQKSL 320
Cdd:PRK15127 238 TRLTsteefgkillkvNQDGSRVRLRDVAKIELGGENYDIIAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFF 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 321 PAGVIVEPVYDRTNLVDKTIATVQKNLFEGAVLVIVILLLLLGNITGALITAMVIPLSML--FAITGMVGNRVSGNLMSL 398
Cdd:PRK15127 318 PSGLKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLgtFAVLAAFGFSINTLTMFG 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 399 GAIDFGLIVDGAVIVVENCLRQlgMAQHKhgrlLTLSErlevVTSATKEVFSPAVFGI-LIIMLVYLPLFALSGVEGKMF 477
Cdd:PRK15127 398 MVLAIGLLVDDAIVVVENVERV--MAEEG----LPPKE----ATRKSMGQIQGALVGIaMVLSAVFVPMAFFGGSTGAIY 467
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 478 QPMAFTVVAALIGALIFAVTFVPAAIAVFVRGKVDESENAVMRGVKKIYKPLLNLS-----------LKLPWLMISIATV 546
Cdd:PRK15127 468 RQFSITIVSAMALSVLVALILTPALCATMLKPIAKGDHGEGKKGFFGWFNRMFEKSthhytdsvgniLRSTGRYLVLYLI 547
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 547 LVLVLGFKVKNMGAEFLPQLDEGDIAMHALRITGTGIEQSVQMQKQLEQALLAQpEIANVFSKIGTADVASDPMPPNVAD 626
Cdd:PRK15127 548 IVVGMAYLFVRLPSSFLPDEDQGVFLTMVQLPAGATQERTQKVLNEVTDYYLTK-EKNNVESVFAVNGFGFAGRGQNTGI 626
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 627 TFLMLKPRAQWPDPSLSKDALVQRIRHRVNEVpgnnyefTQPIEMRFNeLIAGVRADVALriyGDDLAILKQFG---EKA 703
Cdd:PRK15127 627 AFVSLKDWADRPGEENKVEAITMRATRAFSQI-------KDAMVFAFN-LPAIVELGTAT---GFDFELIDQAGlghEKL 695
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 704 TSLMRNITGA--------TDVRLEQMEGLPTLSVTPMRDHMALLGLTVNDIQQTLAAAVGGVqtgliYEGDkrFSLLVRL 775
Cdd:PRK15127 696 TQARNQLLGEaakhpdmlVGVRPNGLEDTPQFKIDIDQEKAQALGVSISDINTTLGAAWGGS-----YVND--FIDRGRV 768
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 776 DKRWSEDVSALARLPIALP----QSSNPELafVPLGEVATISIEKGPNQINRESGKRNVVVTANVA-GRDLAsfvrDAQA 850
Cdd:PRK15127 769 KKVYVMSEAKYRMLPDDIGdwyvRAADGQM--VPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAApGKSTG----EAME 842
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 851 TMNaQL--NLPSGYWLEYGGTFEQLQSASKRLSLVVPVTLLLIFGLLYSAFGSLRDSLIIFSGVPLALTGGVLALLLRDM 928
Cdd:PRK15127 843 LME-ELasKLPTGVGYDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGL 921
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 929 PLSISAGVGFIALSGVAVLNGVVMLSFIKQLRN-EGLSLYYAIHSGALQRLRPVLMTALVASLGFIPMALNTGTGAEIQR 1007
Cdd:PRK15127 922 TNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDkEGKGLIEATLEAVRMRLRPILMTSLAFILGVMPLVISSGAGSGAQN 1001
|
1050 1060 1070
....*....|....*....|....*....|....*
gi 1590405811 1008 PLATVVVGGIMSSTLLTLLILPALYKLVHGKFKKQ 1042
Cdd:PRK15127 1002 AVGTGVMGGMVTATVLAIFFVPVFFVVVRRRFSRK 1036
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
871-997 |
6.47e-08 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 56.79 E-value: 6.47e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 871 EQLQSASKRLSLVVPVTLLLIFGLLYSAFGSLRDSLIIF--SGVPLALTGGVLALLlrDMPLSISAGVGFIALSGVAVLN 948
Cdd:COG1033 211 DIAEAIQSDLAIFFPLALLLILLLLFLFFRSLRGVLLPLlvVLLAVIWTLGLMGLL--GIPLSPLTILVPPLLLAIGIDY 288
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1590405811 949 GVVMLSFIKQLRNEGLSLYYAIHSGALQRLRPVLMTALVASLGFIPMAL 997
Cdd:COG1033 289 GIHLLNRYREERRKGLDKREALREALRKLGPPVLLTSLTTAIGFLSLLF 337
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
364-608 |
2.07e-05 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 48.70 E-value: 2.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 364 NITGALITAMVIPLSML--FAITGMVGNRVSGNLMSLGAIDFGLIVDGAVIVVeNCLRQLgMAQHKHgrlltlseRLEVV 441
Cdd:COG1033 241 SLRGVLLPLLVVLLAVIwtLGLMGLLGIPLSPLTILVPPLLLAIGIDYGIHLL-NRYREE-RRKGLD--------KREAL 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 442 TSATKEVFSPAVFGILIIMLVYLplfALSGVEGKMFQPMAFTVVAALIGALIFAVTFVPAAIAVFVRGKVDESENAVMRG 521
Cdd:COG1033 311 REALRKLGPPVLLTSLTTAIGFL---SLLFSDIPPIRDFGIVAAIGVLLAFLTSLTLLPALLSLLPRPKPKTRRLKKPPE 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 522 VKKIYKPLLNLSLKLPWLMISIATVLVLVLGFKVKNMG-----AEFLPQLDEGDIAMHAL--RITGT------------- 581
Cdd:COG1033 388 LGRLLAKLARFVLRRPKVILVVALVLAVVSLYGISRLKveydfEDYLPEDSPIRQDLDFIeeNFGGSdplevvvdtgepd 467
|
250 260
....*....|....*....|....*....
gi 1590405811 582 GIEQSVQMQK--QLEQALLAQPEIANVFS 608
Cdd:COG1033 468 GLKDPEVLKEidRLQDYLESLPEVGKVLS 496
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
770-1026 |
5.66e-04 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 44.08 E-value: 5.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 770 SLLVRLDKRWSEDVSALARLPialpqsSNPELAFVPLGEVATISIEKGPNQINREsgKRNVVVTANVA---GRDLASFVR 846
Cdd:COG1033 499 DLVKELNQALNEGDPKYYALP------ESRELLAQLLLLLSSPPGDDLSRFVDED--YSAARVTVRLKdldSEEIKALVE 570
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 847 DAQATMNAQLNlPSGYWLEYGGTF----EQLQSASKRLSLVVPVTLLLIFGLLYSAFGSLRDSLI--IFSGVPLALTGGV 920
Cdd:COG1033 571 EVRAFLAENFP-PDGVEVTLTGSAvlfaAINESVIESQIRSLLLALLLIFLLLLLAFRSLRLGLIslIPNLLPILLTFGL 649
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1590405811 921 LALLlrDMPLSIS-AGVGFIALsGVAVLNGVVMLSFIKQLRNEGLSLYYAIHSGALQRLRPVLMTALVASLGFIPMALnt 999
Cdd:COG1033 650 MGLL--GIPLNIAtAVVASIAL-GIGVDYTIHFLSRYREERRKGGDLEEAIRRALRTTGKAILFTSLTLAAGFGVLLF-- 724
|
250 260
....*....|....*....|....*..
gi 1590405811 1000 gTGAEIQRPLATVVVGGIMSSTLLTLL 1026
Cdd:COG1033 725 -SSFPPLADFGLLLALGLLVALLAALL 750
|
|
| |
