|
Name |
Accession |
Description |
Interval |
E-value |
| PT_UbiA_1 |
cd13964 |
UbiA family of prenyltransferases (PTases), Unknown subgroup; Many characterized members of ... |
7-295 |
1.12e-87 |
|
UbiA family of prenyltransferases (PTases), Unknown subgroup; Many characterized members of the UbiA prenyltransferase family are aromatic prenyltransferases and play an important role in the biosynthesis of heme, chlorophyll, vitamin E, and vitamin K. They contain two copies of a motif similar to the active site DxxD motif of trans-prenyltransferases and are potentially related. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways. The function of this subgroup is unknown.
Pssm-ID: 260127 Cd Length: 282 Bit Score: 263.29 E-value: 1.12e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 7 YFQLMRLPAVFTAMSDIILGFLLTHGSFNPPVSFALLLVASAGLYLSGMVFNDVFDRKVDAEERPSRPIPSGRISTQKAA 86
Cdd:cd13964 1 YLQLVRLPNLFTVPADVLAGAALAGGGLGPVLRLALLLLASVLLYAAGMVLNDVFDAELDARERPERPIPSGRVSRGAAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 87 ALGGLLMLAGVGAAQTVGTQSLIVAGLLVVAILGYDTILKKTFLGPVMMGICRFLNVMLGASAVAreiNLWVKPQLRIAA 166
Cdd:cd13964 81 ALGAGLLAAGVALAALVGRLSGLVALLLAAAILLYDAWLKHTPLGPLLMGLCRGLNLLLGASAAA---AGGLGPALLAAL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 167 ALGLFILGLTWFARMEAKQSHRGHLI--GGMLVINAGLGALVWMLATYPWPqqlnltMVLAATGVVILTINRRLVQAVLN 244
Cdd:cd13964 158 ALGVYIAGVTYIARGEVHGGPRRLLPlaLLAVLLVIGLALALAAPRGGRVL------LALLFLALFAAWVGRPLLRAYRD 231
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1718823346 245 PIPQNVQIAVKTMLTSYVMLNAIMVFVWtANPQYAIITAALLLPTILLSRW 295
Cdd:cd13964 232 PSPPNIGKAVGAGILSLIPLDAALAAAF-GGPALALLVLALLPLALLLARK 281
|
|
| prenyl_rel_EboC |
NF035940 |
UbiA-like protein EboC; |
6-299 |
1.11e-53 |
|
UbiA-like protein EboC;
Pssm-ID: 468273 Cd Length: 292 Bit Score: 176.58 E-value: 1.11e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 6 AYFQLMRLPAVFTAMSDIILGF------LLTHGSFNPPVSFALLLVASAGLYLSGMVFNDVFDRKVDAEERPSRPIPSGR 79
Cdd:NF035940 1 AYLQLMRPANIVTAWADILAGFaisgflTLTWSSAPNDISLIWLLLATIGLYGGGVVFNDVFDAELDAVERPERPIPSGR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 80 ISTQKAAALGGLLMLAGVGAAQTVGTQSLIVAGLLVVAILGYDTILKK-TFLGPVMMGICRFLNVMLGASAvareinlwV 158
Cdd:NF035940 81 VSKQAALLLGSLLLLIGILAAFQVSLLSGVIALAIALAALLYDRFGKHhAIFGPLNMGLCRGGNLLLGMSV--------V 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 159 KPQLRIAAALGL----FILGLTWFARMEAKQSHRGHLIGGMLVInAGLGALVWMLATYPWPqqlNLTMVLAATGVVILTI 234
Cdd:NF035940 153 PEALSEYWFLALipivYIAAITMISRGEVHGGKKSTLIIALLLY-ALVIASLLGLAFLQNG---NLLIALPFVLLFAILI 228
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1718823346 235 NRRLVQAVLNPIPQNVQIAVKTMLTSYVMLNAIMVFVWtANPQYAIITAALLLPTILLSRWMSVT 299
Cdd:NF035940 229 FPPLIKAIQNPIPPNIGKAVKAGVLSLIVLNAALAAGF-GGWPYGLLVLLLLPLSLLLAKIFAVT 292
|
|
| UbiA |
COG0382 |
4-hydroxybenzoate polyprenyltransferase [Coenzyme transport and metabolism]; 4-hydroxybenzoate ... |
5-175 |
6.80e-15 |
|
4-hydroxybenzoate polyprenyltransferase [Coenzyme transport and metabolism]; 4-hydroxybenzoate polyprenyltransferase is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440151 Cd Length: 280 Bit Score: 72.95 E-value: 6.80e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 5 LAYFQLMRLPA---VFTAMSDIILGFLLTHGSFNPPVSFALLLVASAGLYLSGMVFNDVFDRKVDA--EERPSRPIPSGR 79
Cdd:COG0382 1 RAYLRLLRLDRpigILLLLWPTLWALFLAAGGLPDLLLLLLAVLGTVLMRSAGYVINDYFDREIDRinERKPNRPLASGR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 80 ISTQKAAALGGLLMLAGVGAAQTVGTQSLIVAGLLVVAILGYDTILKK-TFLGPVMMGICRFLNVMLGASAVAREINLWV 158
Cdd:COG0382 81 ISLREALLLAIVLLLLALALALLLNPLTFLLALAALALAWAYSLFLKRfTLLGNLVLGLLFGLGILMGFAAVTGSLPLSA 160
|
170
....*....|....*..
gi 1718823346 159 kpqLRIAAALGLFILGL 175
Cdd:COG0382 161 ---WLLALAAFLWTLAY 174
|
|
| ubiA |
PRK12884 |
prenyltransferase; Reviewed |
1-152 |
8.91e-15 |
|
prenyltransferase; Reviewed
Pssm-ID: 183812 Cd Length: 279 Bit Score: 72.68 E-value: 8.91e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 1 MKKCLAYFQLMRLPAVFTAMSDIILGFLLTHGsFNPPVSFALLLVASAGLYLSGMVFNDVFDRKVDAEERPSRPIPSGRI 80
Cdd:PRK12884 1 RTKMKAYLELLRPEHGLMAGIAVVLGAIIALG-GLPLDEALLGFLTAFFASGSANALNDYFDYEVDRINRPDRPIPSGRI 79
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1718823346 81 STQKAAALGGLLMLAGVGAAQTVGTQSLIVAGLLVVAILGYDTILKKT-FLGPVMMGICRFLNVMLGASAVAR 152
Cdd:PRK12884 80 SRREALLLAILLFILGLIAAYLISPLAFLVVILVSVLGILYNWKLKEYgLIGNLYVAFLTGMTFIFGGIAVGE 152
|
|
| UbiA |
pfam01040 |
UbiA prenyltransferase family; |
23-178 |
3.53e-14 |
|
UbiA prenyltransferase family;
Pssm-ID: 460038 [Multi-domain] Cd Length: 250 Bit Score: 70.72 E-value: 3.53e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 23 IILGFLLTHGSFNPPVSFALLLVASAGLYLSGMVFNDVFDRKVDA--EERPSRPIPSGRISTQKAAALGGLLMLAGVGAA 100
Cdd:pfam01040 5 ALAGLALAAGGVPDLLLLLLALLGTVLARAAANALNDYYDRDIDAimPRTPNRPLPSGRISPREALIFALVLLALGLLLL 84
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1718823346 101 QTVGTQSLIVAGLLVVAILGYDTILKK-TFLGPVMMGICRFLNVMLGASAVAREINLWVkpqLRIAAALGLFILGLTWF 178
Cdd:pfam01040 85 LLLNPLTALLGLAALLLYVLYTLRLKRrTLLGQLVGGLAFGLPPLLGWAAVTGSLSPLA---LLLALALFLWTWAIALA 160
|
|
| chlor_syn_BchG |
TIGR01476 |
bacteriochlorophyll/chlorophyll synthetase; This model describes a subfamily of a large family ... |
41-138 |
2.18e-06 |
|
bacteriochlorophyll/chlorophyll synthetase; This model describes a subfamily of a large family of polyprenyltransferases (pfam01040) that also includes 4-hydroxybenzoate octaprenyltransferase and protoheme IX farnesyltransferase (heme O synthase). Members of this family are found exclusively in photosynthetic organisms, including a single copy in Arabidopsis thaliana. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]
Pssm-ID: 130541 Cd Length: 283 Bit Score: 48.24 E-value: 2.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 41 ALLLVASAGLYLSGM--VFNDVFDRKVDAEERPSRPIPSGRISTQKAAALGGLLMLAGVGAAQTVGTQS---LIVAGLLV 115
Cdd:TIGR01476 39 MLLGMLMAGPLGTGFsqSINDYFDRDVDAINEPQRPIPSGIISLREVRWNWLVLTVAGLLVALVLGNWLivlFTVVGIVL 118
|
90 100
....*....|....*....|....*
gi 1718823346 116 VAILGYDTI-LKKTF-LGPVMMGIC 138
Cdd:TIGR01476 119 AVIYSMPPIkLKRNGwLGPPAVGLS 143
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PT_UbiA_1 |
cd13964 |
UbiA family of prenyltransferases (PTases), Unknown subgroup; Many characterized members of ... |
7-295 |
1.12e-87 |
|
UbiA family of prenyltransferases (PTases), Unknown subgroup; Many characterized members of the UbiA prenyltransferase family are aromatic prenyltransferases and play an important role in the biosynthesis of heme, chlorophyll, vitamin E, and vitamin K. They contain two copies of a motif similar to the active site DxxD motif of trans-prenyltransferases and are potentially related. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways. The function of this subgroup is unknown.
Pssm-ID: 260127 Cd Length: 282 Bit Score: 263.29 E-value: 1.12e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 7 YFQLMRLPAVFTAMSDIILGFLLTHGSFNPPVSFALLLVASAGLYLSGMVFNDVFDRKVDAEERPSRPIPSGRISTQKAA 86
Cdd:cd13964 1 YLQLVRLPNLFTVPADVLAGAALAGGGLGPVLRLALLLLASVLLYAAGMVLNDVFDAELDARERPERPIPSGRVSRGAAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 87 ALGGLLMLAGVGAAQTVGTQSLIVAGLLVVAILGYDTILKKTFLGPVMMGICRFLNVMLGASAVAreiNLWVKPQLRIAA 166
Cdd:cd13964 81 ALGAGLLAAGVALAALVGRLSGLVALLLAAAILLYDAWLKHTPLGPLLMGLCRGLNLLLGASAAA---AGGLGPALLAAL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 167 ALGLFILGLTWFARMEAKQSHRGHLI--GGMLVINAGLGALVWMLATYPWPqqlnltMVLAATGVVILTINRRLVQAVLN 244
Cdd:cd13964 158 ALGVYIAGVTYIARGEVHGGPRRLLPlaLLAVLLVIGLALALAAPRGGRVL------LALLFLALFAAWVGRPLLRAYRD 231
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1718823346 245 PIPQNVQIAVKTMLTSYVMLNAIMVFVWtANPQYAIITAALLLPTILLSRW 295
Cdd:cd13964 232 PSPPNIGKAVGAGILSLIPLDAALAAAF-GGPALALLVLALLPLALLLARK 281
|
|
| prenyl_rel_EboC |
NF035940 |
UbiA-like protein EboC; |
6-299 |
1.11e-53 |
|
UbiA-like protein EboC;
Pssm-ID: 468273 Cd Length: 292 Bit Score: 176.58 E-value: 1.11e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 6 AYFQLMRLPAVFTAMSDIILGF------LLTHGSFNPPVSFALLLVASAGLYLSGMVFNDVFDRKVDAEERPSRPIPSGR 79
Cdd:NF035940 1 AYLQLMRPANIVTAWADILAGFaisgflTLTWSSAPNDISLIWLLLATIGLYGGGVVFNDVFDAELDAVERPERPIPSGR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 80 ISTQKAAALGGLLMLAGVGAAQTVGTQSLIVAGLLVVAILGYDTILKK-TFLGPVMMGICRFLNVMLGASAvareinlwV 158
Cdd:NF035940 81 VSKQAALLLGSLLLLIGILAAFQVSLLSGVIALAIALAALLYDRFGKHhAIFGPLNMGLCRGGNLLLGMSV--------V 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 159 KPQLRIAAALGL----FILGLTWFARMEAKQSHRGHLIGGMLVInAGLGALVWMLATYPWPqqlNLTMVLAATGVVILTI 234
Cdd:NF035940 153 PEALSEYWFLALipivYIAAITMISRGEVHGGKKSTLIIALLLY-ALVIASLLGLAFLQNG---NLLIALPFVLLFAILI 228
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1718823346 235 NRRLVQAVLNPIPQNVQIAVKTMLTSYVMLNAIMVFVWtANPQYAIITAALLLPTILLSRWMSVT 299
Cdd:NF035940 229 FPPLIKAIQNPIPPNIGKAVKAGVLSLIVLNAALAAGF-GGWPYGLLVLLLLPLSLLLAKIFAVT 292
|
|
| UbiA |
COG0382 |
4-hydroxybenzoate polyprenyltransferase [Coenzyme transport and metabolism]; 4-hydroxybenzoate ... |
5-175 |
6.80e-15 |
|
4-hydroxybenzoate polyprenyltransferase [Coenzyme transport and metabolism]; 4-hydroxybenzoate polyprenyltransferase is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440151 Cd Length: 280 Bit Score: 72.95 E-value: 6.80e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 5 LAYFQLMRLPA---VFTAMSDIILGFLLTHGSFNPPVSFALLLVASAGLYLSGMVFNDVFDRKVDA--EERPSRPIPSGR 79
Cdd:COG0382 1 RAYLRLLRLDRpigILLLLWPTLWALFLAAGGLPDLLLLLLAVLGTVLMRSAGYVINDYFDREIDRinERKPNRPLASGR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 80 ISTQKAAALGGLLMLAGVGAAQTVGTQSLIVAGLLVVAILGYDTILKK-TFLGPVMMGICRFLNVMLGASAVAREINLWV 158
Cdd:COG0382 81 ISLREALLLAIVLLLLALALALLLNPLTFLLALAALALAWAYSLFLKRfTLLGNLVLGLLFGLGILMGFAAVTGSLPLSA 160
|
170
....*....|....*..
gi 1718823346 159 kpqLRIAAALGLFILGL 175
Cdd:COG0382 161 ---WLLALAAFLWTLAY 174
|
|
| PT_UbiA_DGGGPS |
cd13961 |
Geranylgeranylglycerol-phosphate geranylgeranyltransferase; Digeranylgeranylglyceryl phosphate ... |
6-150 |
8.13e-15 |
|
Geranylgeranylglycerol-phosphate geranylgeranyltransferase; Digeranylgeranylglyceryl phosphate synthase (DGGGPS) transfers a geranylgeranyl group from geranylgeranyl diphosphate to (S)-3-O-geranylgeranylglyceryl phosphate to form (S)-2,3-di-O-geranylgeranylglyceryl phosphate, as part of the isoprenoid ether lipid biosynthesis. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways.
Pssm-ID: 260124 Cd Length: 270 Bit Score: 72.92 E-value: 8.13e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 6 AYFQLMRLP-AVFTAMSDIILGFLLTHGSFNPPVSFALLLVASAGLYL-SGMVFNDVFDRKVDAEERPSRPIPSGRISTQ 83
Cdd:cd13961 1 AYLELIRPPnLLMAALAQYLGALFALGPLLSLNDLELLLLFLSVFLIAaAGYIINDYFDVEIDRINKPDRPIPSGRISRR 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1718823346 84 KAAALGGLLMLAGVGAAQTVGTQSLIVAGLLVVAILGYDTILKKT-FLGPVMMGICRFLNVMLGASAV 150
Cdd:cd13961 81 EALILSILLNALGLILAFLLSPLALLIALLNSLLLWLYSHKLKRTpLIGNLLVALLTGLPFLFGGLAA 148
|
|
| ubiA |
PRK12884 |
prenyltransferase; Reviewed |
1-152 |
8.91e-15 |
|
prenyltransferase; Reviewed
Pssm-ID: 183812 Cd Length: 279 Bit Score: 72.68 E-value: 8.91e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 1 MKKCLAYFQLMRLPAVFTAMSDIILGFLLTHGsFNPPVSFALLLVASAGLYLSGMVFNDVFDRKVDAEERPSRPIPSGRI 80
Cdd:PRK12884 1 RTKMKAYLELLRPEHGLMAGIAVVLGAIIALG-GLPLDEALLGFLTAFFASGSANALNDYFDYEVDRINRPDRPIPSGRI 79
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1718823346 81 STQKAAALGGLLMLAGVGAAQTVGTQSLIVAGLLVVAILGYDTILKKT-FLGPVMMGICRFLNVMLGASAVAR 152
Cdd:PRK12884 80 SRREALLLAILLFILGLIAAYLISPLAFLVVILVSVLGILYNWKLKEYgLIGNLYVAFLTGMTFIFGGIAVGE 152
|
|
| ubiA |
PRK12882 |
prenyltransferase; Reviewed |
6-180 |
2.02e-14 |
|
prenyltransferase; Reviewed
Pssm-ID: 183811 Cd Length: 276 Bit Score: 71.93 E-value: 2.02e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 6 AYFQLMRLPAVFTAMSDIILGFLLTHGSFNPPVSFALLLVASAGLYLSGMVFNDVFDRKVDAEERPSRPIPSGRISTQKA 85
Cdd:PRK12882 6 GYLELTRPVNAVVAGVAAFIGAFIAGGILSSPSLTGLAFAAVFLATGAGNAINDYFDREIDRINRPDRPIPSGAVSPRGA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 86 AALGGLLMLAGVGAAQTVGTQSLIVAGLLVVAILGYDTILKKT-FLGPVMMGICRFLNVMLGASAVAREinlwvkpqlRI 164
Cdd:PRK12882 86 LAFSILLFAAGVALAFLLPPLCLAIALFNSLLLVLYAETLKGTpGLGNASVAYLTGSTFLFGGAAVGTE---------GL 156
|
170
....*....|....*..
gi 1718823346 165 AAALGLFIL-GLTWFAR 180
Cdd:PRK12882 157 LALLVLFALaALATLAR 173
|
|
| UbiA |
pfam01040 |
UbiA prenyltransferase family; |
23-178 |
3.53e-14 |
|
UbiA prenyltransferase family;
Pssm-ID: 460038 [Multi-domain] Cd Length: 250 Bit Score: 70.72 E-value: 3.53e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 23 IILGFLLTHGSFNPPVSFALLLVASAGLYLSGMVFNDVFDRKVDA--EERPSRPIPSGRISTQKAAALGGLLMLAGVGAA 100
Cdd:pfam01040 5 ALAGLALAAGGVPDLLLLLLALLGTVLARAAANALNDYYDRDIDAimPRTPNRPLPSGRISPREALIFALVLLALGLLLL 84
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1718823346 101 QTVGTQSLIVAGLLVVAILGYDTILKK-TFLGPVMMGICRFLNVMLGASAVAREINLWVkpqLRIAAALGLFILGLTWF 178
Cdd:pfam01040 85 LLLNPLTALLGLAALLLYVLYTLRLKRrTLLGQLVGGLAFGLPPLLGWAAVTGSLSPLA---LLLALALFLWTWAIALA 160
|
|
| PT_UbiA |
cd13956 |
UbiA family of prenyltransferases (PTases); Many characterized members of the UbiA ... |
8-178 |
8.50e-12 |
|
UbiA family of prenyltransferases (PTases); Many characterized members of the UbiA prenyltransferase family are aromatic prenyltransferases and play an important role in the biosynthesis of heme, chlorophyll, vitamin E, and vitamin K. They contain two copies of a motif similar to the active site DxxD motif of trans-prenyltransferases and are potentially related. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways.
Pssm-ID: 260119 [Multi-domain] Cd Length: 271 Bit Score: 64.29 E-value: 8.50e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 8 FQLMRLPAVFTAMSDIILGFLL-THGSFNPPVSFALLLVASAGLYLSGMVFNDVFDRKVDAEERPSRPIPSGRISTQKAA 86
Cdd:cd13956 1 LRLMRPYTLLYVLAPALAGAALaGAFAGPLPALLLLALLAVFLGAGAGYALNDYTDRELDAINKPDRPLPSGRLSPRQAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 87 ALGGLLMLAGVGAAQTVGTQSLIVAGLLVVAILGYDTILKKT-FLGPVMMGICRFLNVMLGASAVAREINLWvkPQLRIA 165
Cdd:cd13956 81 AFAAALLLVGLALALALGPLALLLLLAGLLLGLAYSLGLKRLkLGGWGVLGYATGLALLPGLGAVAAGGLVP--LALLLA 158
|
170
....*....|...
gi 1718823346 166 AALGLFILGLTWF 178
Cdd:cd13956 159 LVFLLLGLGINLY 171
|
|
| PRK09573 |
PRK09573 |
(S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase; Reviewed |
6-128 |
9.20e-11 |
|
(S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase; Reviewed
Pssm-ID: 181963 Cd Length: 279 Bit Score: 61.13 E-value: 9.20e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 6 AYFQLMRLPAVFTAMSDIILGFLLTHGsFNPPVSFALLLVASAGLYLS-GMVFNDVFDRKVDAEERPSRPIPSGRISTQK 84
Cdd:PRK09573 5 AYFELIRPKNCIGASIGAIIGYLIASN-FKIDLKGIILAALVVFLVCAgGNVINDIYDIEIDKINKPERPIPSGRISLKE 83
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1718823346 85 AAALGGLLMLAGVGAAQTVGTQSLIVAGLLVVAILGYDTILKKT 128
Cdd:PRK09573 84 AKIFSITLFIVGLILSIFINIYAFLIALLNSILLYLYAKDLKKT 127
|
|
| PT_UbiA_COQ2 |
cd13959 |
4-Hydroxybenzoate polyprenyltransferase; 4-Hydroxybenzoate polyprenyltransferase, also known ... |
24-177 |
5.44e-10 |
|
4-Hydroxybenzoate polyprenyltransferase; 4-Hydroxybenzoate polyprenyltransferase, also known as Coq2, catalyzes the prenylation of p-hydroxybenzoate with an all-trans polyprenyl group, an important step in ubiquinone (CoQ) biosynthesis. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways.
Pssm-ID: 260122 [Multi-domain] Cd Length: 272 Bit Score: 59.02 E-value: 5.44e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 24 ILGFLLTHGSFNPPV--SFALLLVASAGLYLSGMVFNDVFDRKVDAE-ERP-SRPIPSGRISTQKAAALGGLLMLAGVGA 99
Cdd:cd13959 17 LWGLLLAAGGLPLPLlkLLLLFLLGAFLMRSAGCTINDIADRDIDAKvPRTkNRPLASGAISVKEALLFLAVQLLLGLAL 96
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1718823346 100 AQTVGTQSLIVAGLLVVAILGYDTILKKTFLGPVMMGICRFLNVMLGASAVAREINLwvkpqlriaAALGLFILGLTW 177
Cdd:cd13959 97 LLQLNPLTILLSPIALLLVLIYPLMKRFTYWPQLVLGLAFGWGPLMGWAAVTGSLPL---------PALLLYLAVIFW 165
|
|
| PT_UbiA_Cox10 |
cd13957 |
Protoheme IX farnesyltransferase; Protoheme IX farnesyltransferase (also called heme O ... |
16-136 |
4.76e-08 |
|
Protoheme IX farnesyltransferase; Protoheme IX farnesyltransferase (also called heme O synthase, heme A:farnesyltransferase, cytochrome c oxidase subunit X [Cox10]) converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of the heme B porphyrin ring with a hydroxyethyl farnesyl side group. It is localized at the mitochondrial inner membrane. Eukaryotic Cox10 is important for the maturation of the heme A prosthetic group of cytochrome c oxidase (COX), the terminal component of the mitochondrial respiratory chain, that catalyzes the electron transfer from reduced cytochrome c to oxygen. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways.
Pssm-ID: 260120 Cd Length: 271 Bit Score: 53.21 E-value: 4.76e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 16 VFTAMSdiilGFLLTHGSFNPPVSFALLLVASAGLYLSGMVFNDVFDRKVDAE-ERPS-RPIPSGRISTQKAAALGGLLM 93
Cdd:cd13957 13 LLTALA----GYLLAPGGVPDLLLLLLTLLGTALVSASANALNQYIERDIDAKmKRTRnRPLPSGRISPKHALIFGLVLG 88
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1718823346 94 LAGVGAAQTvgTQSLIVAGLLVVAILGYD---TILKK------TFLG------PVMMG 136
Cdd:cd13957 89 ILGLALLAL--FVNPLTALLGLLGIFLYVfvyTPLKKrttplnTVIGgiagaiPPLIG 144
|
|
| PT_UbiA_chlorophyll |
cd13958 |
Bacteriochlorophyll/chlorophyll synthetase; Chlorophyll synthase catalyzes the last step of ... |
32-295 |
6.16e-08 |
|
Bacteriochlorophyll/chlorophyll synthetase; Chlorophyll synthase catalyzes the last step of chlorophyll (Chl) biosynthesis, the addition of the tetraprenyl (phytyl or geranylgeranyl) side chain. In plant chloroplast, the chlorophyll synthase is located in thylakoid membrane and has been shown to also have a regulatory or channeling function. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways.
Pssm-ID: 260121 Cd Length: 277 Bit Score: 52.62 E-value: 6.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 32 GSFNPPVSFALLLVASAGLYLSGM--VFNDVFDRKVDAEERPSRPIPSGRISTQKAAALGGLLMLAGVGAAQTVGtqSLI 109
Cdd:cd13958 28 QWSNWDVWLLLLGMLLAGPLLTGTsqTINDYYDREVDAINEPYRPIPSGRISEREALWNIWVLLLLSLLVALFLD--GPW 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 110 VAGLLVVAIlgydtilkktflgpvmmgicrFLNVMLGASAVAREINLWVKPqlriaAALGLFILGLTWFArmeakqshrG 189
Cdd:cd13958 106 VFAAAVVGL---------------------VLAYIYSAPPLKLKQNGWWGN-----AAVGLSYEGLPWWA---------G 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 190 HLIggmlvinaglgalvwmLATYPWPQQLNLTMVLAATGVVILTIN--------RRLVqavLNPIPqnVQIAVKT-MLTS 260
Cdd:cd13958 151 AAA----------------FAGLLTWESLALALLYSIGAHGIMTLNdfksiegdRQLG---LRSLP--VALGVDTaAWIA 209
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1718823346 261 YVMLN-----AIMVFVWTANPQYAIITAALLLPTILLSRW 295
Cdd:cd13958 210 CGVIDvpqlaVAALLLAWGETWYAAVVGALLLAQIPLQFK 249
|
|
| PRK07566 |
PRK07566 |
chlorophyll synthase ChlG; |
32-292 |
3.86e-07 |
|
chlorophyll synthase ChlG;
Pssm-ID: 236052 Cd Length: 314 Bit Score: 50.69 E-value: 3.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 32 GSFNPPVSFALLLVAS---AGLYLSGM--VFNDVFDRKVDAEERPSRPIPSGRISTQKAAALGGLLMLAGVGAAqtvgtq 106
Cdd:PRK07566 54 GAFGWTLENVLKLLAGmllAGPLLCGTsqTLNDYFDREVDAINEPYRPIPSGAISLRWVLYLIAVLTVLGLAVA------ 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 107 slivagllvvailgydtilkkTFLGPVMMGICrFLNVMLGASAVAREI----NLWVKPqlriaAALGLFILGLTWFArme 182
Cdd:PRK07566 128 ---------------------YLLGPWVFLAA-LLGLFLAWIYSAPPLrlkqNGWLGN-----YAVGLSYEGLPWWA--- 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 183 akqshrghligGMLVINAGLgaLVWMLATypwpqqLNLTMVLAATGvvILTIN--------RRLvqaVLNPIPqnVQIAV 254
Cdd:PRK07566 178 -----------GAAAFGAGL--PSWPIVI------LALLYSLGAHG--IMTLNdfksvegdRQL---GLRSLP--VVFGE 231
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1718823346 255 KTM-LTSYVMLN-----AIMVFVWTANPQYAIITAALLLPTILL 292
Cdd:PRK07566 232 KNAaRIACVVIDlfqlaVIALLLAWGQPLYAAIVGLLLIPQITL 275
|
|
| chlor_syn_BchG |
TIGR01476 |
bacteriochlorophyll/chlorophyll synthetase; This model describes a subfamily of a large family ... |
41-138 |
2.18e-06 |
|
bacteriochlorophyll/chlorophyll synthetase; This model describes a subfamily of a large family of polyprenyltransferases (pfam01040) that also includes 4-hydroxybenzoate octaprenyltransferase and protoheme IX farnesyltransferase (heme O synthase). Members of this family are found exclusively in photosynthetic organisms, including a single copy in Arabidopsis thaliana. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]
Pssm-ID: 130541 Cd Length: 283 Bit Score: 48.24 E-value: 2.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 41 ALLLVASAGLYLSGM--VFNDVFDRKVDAEERPSRPIPSGRISTQKAAALGGLLMLAGVGAAQTVGTQS---LIVAGLLV 115
Cdd:TIGR01476 39 MLLGMLMAGPLGTGFsqSINDYFDRDVDAINEPQRPIPSGIISLREVRWNWLVLTVAGLLVALVLGNWLivlFTVVGIVL 118
|
90 100
....*....|....*....|....*
gi 1718823346 116 VAILGYDTI-LKKTF-LGPVMMGIC 138
Cdd:TIGR01476 119 AVIYSMPPIkLKRNGwLGPPAVGLS 143
|
|
| PRK12324 |
PRK12324 |
decaprenyl-phosphate phosphoribosyltransferase; |
23-126 |
3.09e-06 |
|
decaprenyl-phosphate phosphoribosyltransferase;
Pssm-ID: 237058 Cd Length: 295 Bit Score: 47.93 E-value: 3.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 23 IILGFLLTHGSFNPPV------SFALLLVASAGLYLsgmvFNDVFDRKVDAE--ERPSRPIPSGRISTQKAAALGGLLML 94
Cdd:PRK12324 29 VFAAPIFAGNLLNPGAllkvllAFVLFCLASSAVYL----VNDIRDVEADRLhpTKRNRPIASGVVSVSLAYILAVVLLV 104
|
90 100 110
....*....|....*....|....*....|..
gi 1718823346 95 AGVGAAQTVGTQSLIVAGLLVVAILGYDTILK 126
Cdd:PRK12324 105 ASLALAYLLSPKLALVLLVYLVLNLAYSFKLK 136
|
|
| PRK04375 |
PRK04375 |
protoheme IX farnesyltransferase; Provisional |
6-121 |
4.00e-06 |
|
protoheme IX farnesyltransferase; Provisional
Pssm-ID: 235293 Cd Length: 296 Bit Score: 47.44 E-value: 4.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 6 AYFQL-----MRLpAVFTAmsdiILGFLLTHGSFNPPVSFALLLVASAGLYLSGMVFNDVFDRKVDAE-ERPS-RPIPSG 78
Cdd:PRK04375 12 DYLALtkprvISL-NLFTA----LGGMLLAPPGVPPLLLLLLTLLGIALVAGAAGALNNYIDRDIDAKmERTKnRPLVTG 86
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1718823346 79 RISTQKAAALGGLLMLAGVGA-AQTVgtqSLIVAGLLVVAILGY 121
Cdd:PRK04375 87 RISPREALIFGLVLGVLGFLLlGLFV---NPLAAWLTLAGIFFY 127
|
|
| PT_UbiA_2 |
cd13963 |
UbiA family of prenyltransferases (PTases), Unknown subgroup; Many characterized members of ... |
23-157 |
1.03e-05 |
|
UbiA family of prenyltransferases (PTases), Unknown subgroup; Many characterized members of the UbiA prenyltransferase family are aromatic prenyltransferases and play an important role in the biosynthesis of heme, chlorophyll, vitamin E, and vitamin K. They contain two copies of a motif similar to the active site DxxD motif of trans-prenyltransferases and are potentially related. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways. The function of this subgroup is unknown.
Pssm-ID: 260126 Cd Length: 278 Bit Score: 45.93 E-value: 1.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 23 IILGFLLTHGSFNPPVSFALL---LVASAGlYlsgmVFNDVFDRKVDAE--ERPSRPIPSGRISTQKAAALGGLLMLAGV 97
Cdd:cd13963 20 LLFAGQLFDPDLLLAALLAFVafcLAASAV-Y----ILNDLLDLEADRLhpTKRNRPIASGRLSIPAALALAVVLLLAGL 94
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1718823346 98 GAAQTVGTQSLIVAGLLVVAILGYDTILKKTFLGPVMM-GICRFLNVMLGASAVAREINLW 157
Cdd:cd13963 95 ALALLLSPAFLLVLLAYLVLNLAYSLKLKRIPLLDVFViAAGFVLRVLAGAVAIGVPLSPW 155
|
|
| PLN00012 |
PLN00012 |
chlorophyll synthetase; Provisional |
38-103 |
2.25e-05 |
|
chlorophyll synthetase; Provisional
Pssm-ID: 215028 Cd Length: 375 Bit Score: 45.24 E-value: 2.25e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1718823346 38 VSFALLLVASAGLYLSG--MVFNDVFDRKVDAEERPSRPIPSGRISTQKAAALGGLLMLAGVGAAQTV 103
Cdd:PLN00012 121 VAKSIVCMLMSGPFLTGytQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLGGLGLAYTL 188
|
|
| PT_UbiA_UBIAD1 |
cd13962 |
1,4-Dihydroxy-2-naphthoate octaprenyltransferase; Human UBIAD1 is an enzyme involved in the ... |
8-120 |
1.50e-04 |
|
1,4-Dihydroxy-2-naphthoate octaprenyltransferase; Human UBIAD1 is an enzyme involved in the synthesis of MK-4. Menaquinones (MKs, also called bacterial forms) are one of the two forms of natural vitamin K, the other being the plant form, phylloquinone (PK). All forms of vitamin K have a 2-methyl-1,4-naphthoquinone (menadione; K3) ring structure in common. At the 3-position of the ring, PK has a phytyl side chain while MKs have several repeating prenyl units. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways.
Pssm-ID: 260125 Cd Length: 283 Bit Score: 42.50 E-value: 1.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 8 FQLMRLPAVFTAMSDIILGFLLT--HGSFNPPVSFALLLVASAGLYLSGMVFNDVFD--RKVDAEER--PSRPIPSGRIS 81
Cdd:cd13962 1 LLAARPRTLPASLAPVLLGTALAyyLGGFFNWLLFLLALLAALLLQIGVNLANDYFDykKGTDTEPRsgPSRVLVSGLLS 80
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1718823346 82 TQKAAALG-GLLMLAGVGAAQTVGTQSLIVAGLLVVAILG 120
Cdd:cd13962 81 PRQVLRAAlVLLLLAALLGLYLVALGGWLLLLLGLLGILA 120
|
|
| PRK12392 |
PRK12392 |
bacteriochlorophyll c synthase; Provisional |
58-121 |
1.62e-04 |
|
bacteriochlorophyll c synthase; Provisional
Pssm-ID: 171463 Cd Length: 331 Bit Score: 42.76 E-value: 1.62e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 58 NDVFDRKVDAEERPSRPIPSGRISTQKAAALGGLLMLAGVGAAQTVGTQS------LIVAGLLVVAILGY 121
Cdd:PRK12392 70 NDYFDLELDRVNEPTRPIPSGRLSEKEALWNSIIVLLLAIGLGVWLGLHIggergmVIISSILAGLFVAY 139
|
|
| PLN02776 |
PLN02776 |
prenyltransferase |
26-137 |
3.55e-04 |
|
prenyltransferase
Pssm-ID: 215415 Cd Length: 341 Bit Score: 41.65 E-value: 3.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 26 GFLLTHGSFnppVSFALLLVASAGLYL---SGMVFNDVFDRKVDAEERPS--RPIPSGRISTQKAAALGGLLMLAGVG-- 98
Cdd:PLN02776 17 GFVLGSGEA---IDLPGLGWTCAGTMLcaaSANTLNQVFEVKNDSKMKRTmrRPLPSGRISVPHAVAWAVVVGAAGVAll 93
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1718823346 99 AAQTVGTQSLIVAGLLVVAILGYdTILKK-----TFLGPVMMGI 137
Cdd:PLN02776 94 AYKTNMLTAGLGAGNILLYAFVY-TPLKQihpanTWVGAVVGAI 136
|
|
| ubiA |
PRK12883 |
prenyltransferase UbiA-like protein; Reviewed |
24-152 |
4.73e-04 |
|
prenyltransferase UbiA-like protein; Reviewed
Pssm-ID: 171796 Cd Length: 277 Bit Score: 40.87 E-value: 4.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 24 ILGFLLTHGSFnPPVSFALL--LVASAGLYlSGMVFNDVFDRKVDAEERPSRPIPSGRISTQKAAALGGLLMLAGVGAAQ 101
Cdd:PRK12883 23 ILGSLVALGGI-PPIKTLILifLVVYLGCS-GGNTINDYFDYEIDKINRPNRPLPRGAMSRKAALYYSLLLFAVGLALAY 100
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1718823346 102 TVGTQSLIVAGLLVVAILGYDTILKKT-FLGPVMMGICRFLNVMLGASAVAR 152
Cdd:PRK12883 101 LINIEAFLFALGAYVLMFLYAWKLKPLpFIGNVVVALLTGATPIYGAIAVGR 152
|
|
| PRK08238 |
PRK08238 |
UbiA family prenyltransferase; |
40-157 |
1.86e-03 |
|
UbiA family prenyltransferase;
Pssm-ID: 236195 [Multi-domain] Cd Length: 479 Bit Score: 39.47 E-value: 1.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1718823346 40 FALLLVASAGlYlsgmVFNDVFDRKVDaEERPS---RPIPSGRISTQKAAALGGLLMLAGVGAAQTVGTQSLIVAGLLVV 116
Cdd:PRK08238 233 LAFSLCASAV-Y----ILNDLLDLEAD-RAHPRkrrRPFASGALPIPFGLAAAPLLLLAGLALALALGPAFLLVLLAYLA 306
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1718823346 117 AILGYDTILKKTFLGPVMMGICRF-LNVMLGASAVAREINLW 157
Cdd:PRK08238 307 LTLAYSLRLKRKVLVDVLTLAALYtLRIIAGAAAIGVALSFW 348
|
|
| |
