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Conserved domains on  [gi|2083981135|ref|WP_221155603|]
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MULTISPECIES: xanthine dehydrogenase small subunit [unclassified Rhizobium]

Protein Classification

xanthine dehydrogenase small subunit( domain architecture ID 11468536)

xanthine dehydrogenase small subunit is part of the (alphabeta)(2) heterotetrameric cytoplasmic enzyme that functions in the oxidative metabolism of purines such as xanthine and hypoxanthine

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
XdhA COG4630
Xanthine dehydrogenase, Fe-S cluster and FAD-binding subunit XdhA [Nucleotide transport and ...
5-480 0e+00

Xanthine dehydrogenase, Fe-S cluster and FAD-binding subunit XdhA [Nucleotide transport and metabolism];


:

Pssm-ID: 443668 [Multi-domain]  Cd Length: 476  Bit Score: 834.02  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135   5 IRFILNGEDIELTDVGPTETLLDFLRLKRRLTGTKEGCAEGDCGACTVLVGRLVDGKLAYESVNACIRFTGSLHATHVVT 84
Cdd:COG4630     1 IRFLLNGELVELSDVPPTTTLLDWLREDRGLTGTKEGCAEGDCGACTVVVGELDDGGLRYRAVNACILFLPQLDGKALVT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  85 VEHLAGRDGALHPVQQALVDCHGSQCGFCTPGFVMSLYGLWLTKEKPGRREIEKALQGNLCRCTGYEPIVKAAEQVSLMR 164
Cdd:COG4630    81 VEGLAGPDGALHPVQQAMVDHHGSQCGFCTPGFVMSLFALYERGPAPDRADIEDALSGNLCRCTGYRPIIDAARAMAEAP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 165 PSalfDPLERTRSEIIARLWAMQASGTIRIAKGEDRLIVPASVQALAEVLSQEPDATVVAGSTDVGLWVTKQMRRLSPVV 244
Cdd:COG4630   161 AP---DPFAADRAAVAAALRALADGETVELGAGGSRFLAPATLDELAALLAAHPDARLVAGATDVGLWVTKQLRDLPPVI 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 245 FINHLSELQTVTESEDGVTIGAGVSYTRAFEAIARKIPALGRLIDRIGGEQVRNMGTIGGNIANGSPIGDSPPPLIALGA 324
Cdd:COG4630   238 FLGRVAELRRIEETDDGLEIGAAVTLSDAEAALAAHFPELAELLRRFASRQIRNAGTLGGNIANGSPIGDSPPALIALGA 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 325 TLTLRSLEGQRKIPLEDFFIAYGKQDRKPGEFVESVFVPYP-ANSRFAAYKITKRRDEDITAVLGAFLLTLDDaEIVTDI 403
Cdd:COG4630   318 ELVLRSGDGRRTLPLEDFFLGYRKTDLQPGEFVEAIRIPLPaAGQRLRAYKVSKRFDDDISAVCAAFALTLDD-GTVTEA 396
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2083981135 404 RIAYGGMAATPKRARTVETELIGKSWTEATIEAARPAFDVDFQPLTDWRATAEYRQLTAKNLLTRFYLETVGAPAEL 480
Cdd:COG4630   397 RIAFGGMAATPKRARAAEAALLGQPWTEATVAAAAAALAQDFTPLSDMRASAEYRLAVAANLLRRFFLETQGEAPAT 473
 
Name Accession Description Interval E-value
XdhA COG4630
Xanthine dehydrogenase, Fe-S cluster and FAD-binding subunit XdhA [Nucleotide transport and ...
5-480 0e+00

Xanthine dehydrogenase, Fe-S cluster and FAD-binding subunit XdhA [Nucleotide transport and metabolism];


Pssm-ID: 443668 [Multi-domain]  Cd Length: 476  Bit Score: 834.02  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135   5 IRFILNGEDIELTDVGPTETLLDFLRLKRRLTGTKEGCAEGDCGACTVLVGRLVDGKLAYESVNACIRFTGSLHATHVVT 84
Cdd:COG4630     1 IRFLLNGELVELSDVPPTTTLLDWLREDRGLTGTKEGCAEGDCGACTVVVGELDDGGLRYRAVNACILFLPQLDGKALVT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  85 VEHLAGRDGALHPVQQALVDCHGSQCGFCTPGFVMSLYGLWLTKEKPGRREIEKALQGNLCRCTGYEPIVKAAEQVSLMR 164
Cdd:COG4630    81 VEGLAGPDGALHPVQQAMVDHHGSQCGFCTPGFVMSLFALYERGPAPDRADIEDALSGNLCRCTGYRPIIDAARAMAEAP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 165 PSalfDPLERTRSEIIARLWAMQASGTIRIAKGEDRLIVPASVQALAEVLSQEPDATVVAGSTDVGLWVTKQMRRLSPVV 244
Cdd:COG4630   161 AP---DPFAADRAAVAAALRALADGETVELGAGGSRFLAPATLDELAALLAAHPDARLVAGATDVGLWVTKQLRDLPPVI 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 245 FINHLSELQTVTESEDGVTIGAGVSYTRAFEAIARKIPALGRLIDRIGGEQVRNMGTIGGNIANGSPIGDSPPPLIALGA 324
Cdd:COG4630   238 FLGRVAELRRIEETDDGLEIGAAVTLSDAEAALAAHFPELAELLRRFASRQIRNAGTLGGNIANGSPIGDSPPALIALGA 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 325 TLTLRSLEGQRKIPLEDFFIAYGKQDRKPGEFVESVFVPYP-ANSRFAAYKITKRRDEDITAVLGAFLLTLDDaEIVTDI 403
Cdd:COG4630   318 ELVLRSGDGRRTLPLEDFFLGYRKTDLQPGEFVEAIRIPLPaAGQRLRAYKVSKRFDDDISAVCAAFALTLDD-GTVTEA 396
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2083981135 404 RIAYGGMAATPKRARTVETELIGKSWTEATIEAARPAFDVDFQPLTDWRATAEYRQLTAKNLLTRFYLETVGAPAEL 480
Cdd:COG4630   397 RIAFGGMAATPKRARAAEAALLGQPWTEATVAAAAAALAQDFTPLSDMRASAEYRLAVAANLLRRFFLETQGEAPAT 473
xanthine_xdhA TIGR02963
xanthine dehydrogenase, small subunit; Members of this protein family are the small subunit ...
5-473 0e+00

xanthine dehydrogenase, small subunit; Members of this protein family are the small subunit (or, in eukaryotes, the N-terminal domain) of xanthine dehydrogenase, an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and [Purines, pyrimidines, nucleosides, and nucleotides, Other]


Pssm-ID: 274365 [Multi-domain]  Cd Length: 467  Bit Score: 807.65  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135   5 IRFILNGEDIELTDVGPTETLLDFLRLKRRLTGTKEGCAEGDCGACTVLVGRLVDG-KLAYESVNACIRFTGSLHATHVV 83
Cdd:TIGR02963   1 IRFFLNGETVTLSDVDPTRTLLDYLREDAGLTGTKEGCAEGDCGACTVVVGELVDGgKLRYRSVNACIQFLPSLDGKAVV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  84 TVEHLAGRDGALHPVQQALVDCHGSQCGFCTPGFVMSLYGLWLTKEKPGRREIEKALQGNLCRCTGYEPIVKAAEQVSLM 163
Cdd:TIGR02963  81 TVEDLRQPDGRLHPVQQAMVECHGSQCGFCTPGFVMSLYALYKNSPAPSRADIEDALQGNLCRCTGYRPILDAAEAAFDY 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 164 RPSalfDPLERTRSEIIARLWAMQASGTIRIAKGEDRLIVPASVQALAEVLSQEPDATVVAGSTDVGLWVTKQMRRLSPV 243
Cdd:TIGR02963 161 PCS---DPLDADRAPIIERLRALRAGETVELNFGGERFIAPTTLDDLAALKAAHPDARIVAGSTDVGLWVTKQMRDLPDV 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 244 VFINHLSELQTVTESEDGVTIGAGVSYTRAFEAIARKIPALGRLIDRIGGEQVRNMGTIGGNIANGSPIGDSPPPLIALG 323
Cdd:TIGR02963 238 IYVGQVAELKRIEETDDGIEIGAAVTLTDAYAALAKRYPELGELLRRFASLQIRNAGTLGGNIANGSPIGDSPPALIALG 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 324 ATLTLRSLEGQRKIPLEDFFIAYGKQDRKPGEFVESVFVPYPAN-SRFAAYKITKRRDEDITAVLGAFLLTLDDaEIVTD 402
Cdd:TIGR02963 318 ARLTLRKGEGRRTLPLEDFFIDYGKTDRQPGEFVEALHVPRPTPgERFRAYKISKRFDDDISAVCAAFNLELDG-GVVAE 396
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2083981135 403 IRIAYGGMAATPKRARTVETELIGKSWTEATIEAARPAFDVDFQPLTDWRATAEYRQLTAKNLLTRFYLET 473
Cdd:TIGR02963 397 IRIAFGGMAATPKRAAATEAALLGKPWNEATVEAAMAALAGDFTPLSDMRASAEYRLLTAKNLLRRFFLET 467
PLN02906 PLN02906
xanthine dehydrogenase
24-475 5.41e-101

xanthine dehydrogenase


Pssm-ID: 215491 [Multi-domain]  Cd Length: 1319  Bit Score: 329.74  E-value: 5.41e-101
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135   24 TLLDFLRlKRRLTGTKEGCAEGDCGACTVLVGRL--VDGKLAYESVNACIRFTGSLHATHVVTVEHLAGRDGALHPVQQA 101
Cdd:PLN02906     3 TLLEYLR-DLGLTGTKLGCGEGGCGACTVMVSHYdrKTGKCVHYAVNACLAPLYSVEGMHVITVEGIGNRRDGLHPVQEA 81
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  102 LVDCHGSQCGFCTPGFVMSLYGLWLT-KEKPGRREIEKALQGNLCRCTGYEPIVKAA--------------EQVSL---- 162
Cdd:PLN02906    82 LASMHGSQCGFCTPGFIMSMYALLRSsKTPPTEEQIEECLAGNLCRCTGYRPILDAFrvfaktddalytgvSSLSLqdge 161
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  163 ---------------------MRPSALFDPLE--------RTRSEII------ARLWAMQASGTiriaKGEDRLIVPASV 207
Cdd:PLN02906   162 picpstgkpcscgskttsaagTCKSDRFQPISyseidgswYTEKELIfppellLRKLTPLKLLG----NGGLTWYRPTSL 237
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  208 QALAEVLSQEPDATVVAGSTDVGLwvtkQMR--RLSPVVFIN--HLSELQTVTESEDGVTIGAGVSYT---RAFEAI--- 277
Cdd:PLN02906   238 QHLLELKAEYPDAKLVVGNTEVGI----EMRfkNAQYPVLISptHVPELNAIKVKDDGLEIGAAVRLSelqNLFRKVvke 313
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  278 --ARKIPALGRLIDRI---GGEQVRNMGTIGGNIANGSPIGDSPPPLIALGATLTLRSLEG-QRKIPLEDFFIAYGKQDR 351
Cdd:PLN02906   314 rpAHETSACKAFIEQLkwfAGTQIRNVASIGGNICTASPISDLNPLWMAAGATFVIISCDGdIRSVPASDFFLGYRKVDL 393
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  352 KPGEFVESVFVPYPANSRFAA-YKITKRRDEDITAVLGAFLLTLDDAE---IVTDIRIAYGGMAATPKRARTVETELIGK 427
Cdd:PLN02906   394 KPDEILLSVFLPWTRPFEYVKeFKQAHRRDDDIAIVNAGMRVKLEEKDgewIVSDASIAYGGVAPLSVSARKTEEFLIGK 473
                          490       500       510       520       530
                   ....*....|....*....|....*....|....*....|....*....|
gi 2083981135  428 SWTEATIEAARPAFDVDFqPLTDWR--ATAEYRQLTAKNLLTRFYLETVG 475
Cdd:PLN02906   474 PWNKETLQDALKVLQKDI-LIKEDApgGMVEFRKSLALSFFFKFFLWVSH 522
FAD_binding_5 pfam00941
FAD binding domain in molybdopterin dehydrogenase;
200-365 1.31e-71

FAD binding domain in molybdopterin dehydrogenase;


Pssm-ID: 460007 [Multi-domain]  Cd Length: 170  Bit Score: 224.73  E-value: 1.31e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 200 RLIVPASVQALAEVLSQEPDATVVAGSTDVGLWVTKQMRRLSPVVFINHLSELQTVTESEDGVTIGAGVSYTRAFEA-IA 278
Cdd:pfam00941   4 GYYRPASLAEALELLAAGPDAKLVAGGTSLGPLMKLRLARPDHLIDINGIPELRGIEETDGGLEIGAAVTLSEIAEPlLR 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 279 RKIPALGRLIDRIGGEQVRNMGTIGGNIANGSPIGDSPPPLIALGATLTLRSLEGQRKIPLEDFFIAYGKQDRKPGEFVE 358
Cdd:pfam00941  84 EAYPALSEALRKIASPQIRNVGTIGGNIANASPISDLPPALLALDAKVELRSGEGERTVPLEDFFLGYGKTALEPGELIT 163

                  ....*..
gi 2083981135 359 SVFVPYP 365
Cdd:pfam00941 164 AVIIPLP 170
glyceraldDH_beta NF041019
glyceraldehyde dehydrogenase subunit beta;
202-468 9.74e-45

glyceraldehyde dehydrogenase subunit beta;


Pssm-ID: 468948 [Multi-domain]  Cd Length: 280  Bit Score: 158.20  E-value: 9.74e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 202 IVPASVQALAEVLSQEPDATVVAGSTDvgLWVTKQMRRLSP--VVFINHLSELQTVTESEDGVTIGAgvsYTRAFEAIAR 279
Cdd:NF041019    9 VRPDSLDEALDFLEKHEDAKPLAGGQS--LIPMLKLRIIRPsyLVDINRLKELSYIKDEGNEVRIGA---LTTHYEISKN 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 280 -----KIPALGRLIDRIGGEQVRNMGTIGGNIANGSPIGDSPPPLIALGATLTLRSLEGQRKIPLEDFFIAYGKQDRKPG 354
Cdd:NF041019   84 divksNLPLLSEAASKIGDPQVRNMGTIGGSLSNADPAADYPAVLLALDAKVVIRSKSGEREVKAKDFFKGPFTTDLNQG 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 355 EFVESVFVPYPANSRFaAYKITKRRDEDITAVLGAFLLTLDDaEIVTDIRIAYGGMAATPKRARTVETELIGKSWTEATI 434
Cdd:NF041019  164 EIVTEIVVPALKGYKT-SYQKLVRRAGDFAIVGVAVLLKVSG-GVVEDVRIAYTGVNDKPYRAKEAEKALKGKKLSEELI 241
                         250       260       270
                  ....*....|....*....|....*....|....
gi 2083981135 435 EAARPAFDVDFQPLTDWRATAEYRQLTAKNLLTR 468
Cdd:NF041019  242 EKAAEKASEGANPPSDIRGSSEYRKKVMKVLTKR 275
glyceraldDH_gamma NF041020
glyceraldehyde dehydrogenase subunit gamma;
5-161 1.48e-40

glyceraldehyde dehydrogenase subunit gamma;


Pssm-ID: 468949 [Multi-domain]  Cd Length: 162  Bit Score: 143.01  E-value: 1.48e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135   5 IRFILNGEDIElTDVGPTETLLDFLRLKRRLTGTKEGCAEGDCGACTVLVgrlvDGKlayeSVNACIRFTGSLHATHVVT 84
Cdd:NF041020   11 IRVKVNGVWYE-AEVEPRKLLVHFLRDDLGFTGTHVGCDTSTCGACTVIM----NGK----SVKSCTVLAVQADGAEITT 81
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2083981135  85 VEHLAgRDGALHPVQQALVDCHGSQCGFCTPGFVMSLYglWLTKEK--PGRREIEKALQGNLCRCTGYEPIVKAAEQVS 161
Cdd:NF041020   82 IEGLS-KDGKLHPIQEAFWENHALQCGYCTPGMIMQAY--FLLKENpnPTEEEIRDGIHGNLCRCTGYQNIVKAVKEAS 157
CO_deh_flav_C smart01092
CO dehydrogenase flavoprotein C-terminal domain;
372-473 1.45e-30

CO dehydrogenase flavoprotein C-terminal domain;


Pssm-ID: 215021 [Multi-domain]  Cd Length: 102  Bit Score: 114.25  E-value: 1.45e-30
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  372 AYKITKRRDEDITAVLGAFLLTLDDaEIVTDIRIAYGGMAATPKRARTVETELIGKSWTEATI-EAARPAFDVDFQPLTD 450
Cdd:smart01092   1 AYKKSRRRDGDIALVSAAVALTLDG-GRVTEARIALGGVAPTPKRAAEAEAALVGKPLTDEALaRAAAAALAQDFTPLSD 79
                           90       100
                   ....*....|....*....|...
gi 2083981135  451 WRATAEYRQLTAKNLLTRFYLET 473
Cdd:smart01092  80 MRASAEYRRQLAANLLRRALLEA 102
fer2 cd00207
2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in ...
5-71 4.58e-05

2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis and ferredoxins, which participate in redox chains (from bacteria to mammals). Fold is ismilar to thioredoxin.


Pssm-ID: 238126 [Multi-domain]  Cd Length: 84  Bit Score: 42.00  E-value: 4.58e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2083981135   5 IRFILNGEDIELtDVGPTETLLDFLRlkRRLTGTKEGCAEGDCGACTVLV----------GRLVDGKLAYESVNACI 71
Cdd:cd00207     1 VTINVPGSGVEV-EVPEGETLLDAAR--EAGIDIPYSCRAGACGTCKVEVvegevdqsdpSLLDEEEAEGGYVLACQ 74
 
Name Accession Description Interval E-value
XdhA COG4630
Xanthine dehydrogenase, Fe-S cluster and FAD-binding subunit XdhA [Nucleotide transport and ...
5-480 0e+00

Xanthine dehydrogenase, Fe-S cluster and FAD-binding subunit XdhA [Nucleotide transport and metabolism];


Pssm-ID: 443668 [Multi-domain]  Cd Length: 476  Bit Score: 834.02  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135   5 IRFILNGEDIELTDVGPTETLLDFLRLKRRLTGTKEGCAEGDCGACTVLVGRLVDGKLAYESVNACIRFTGSLHATHVVT 84
Cdd:COG4630     1 IRFLLNGELVELSDVPPTTTLLDWLREDRGLTGTKEGCAEGDCGACTVVVGELDDGGLRYRAVNACILFLPQLDGKALVT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  85 VEHLAGRDGALHPVQQALVDCHGSQCGFCTPGFVMSLYGLWLTKEKPGRREIEKALQGNLCRCTGYEPIVKAAEQVSLMR 164
Cdd:COG4630    81 VEGLAGPDGALHPVQQAMVDHHGSQCGFCTPGFVMSLFALYERGPAPDRADIEDALSGNLCRCTGYRPIIDAARAMAEAP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 165 PSalfDPLERTRSEIIARLWAMQASGTIRIAKGEDRLIVPASVQALAEVLSQEPDATVVAGSTDVGLWVTKQMRRLSPVV 244
Cdd:COG4630   161 AP---DPFAADRAAVAAALRALADGETVELGAGGSRFLAPATLDELAALLAAHPDARLVAGATDVGLWVTKQLRDLPPVI 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 245 FINHLSELQTVTESEDGVTIGAGVSYTRAFEAIARKIPALGRLIDRIGGEQVRNMGTIGGNIANGSPIGDSPPPLIALGA 324
Cdd:COG4630   238 FLGRVAELRRIEETDDGLEIGAAVTLSDAEAALAAHFPELAELLRRFASRQIRNAGTLGGNIANGSPIGDSPPALIALGA 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 325 TLTLRSLEGQRKIPLEDFFIAYGKQDRKPGEFVESVFVPYP-ANSRFAAYKITKRRDEDITAVLGAFLLTLDDaEIVTDI 403
Cdd:COG4630   318 ELVLRSGDGRRTLPLEDFFLGYRKTDLQPGEFVEAIRIPLPaAGQRLRAYKVSKRFDDDISAVCAAFALTLDD-GTVTEA 396
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2083981135 404 RIAYGGMAATPKRARTVETELIGKSWTEATIEAARPAFDVDFQPLTDWRATAEYRQLTAKNLLTRFYLETVGAPAEL 480
Cdd:COG4630   397 RIAFGGMAATPKRARAAEAALLGQPWTEATVAAAAAALAQDFTPLSDMRASAEYRLAVAANLLRRFFLETQGEAPAT 473
xanthine_xdhA TIGR02963
xanthine dehydrogenase, small subunit; Members of this protein family are the small subunit ...
5-473 0e+00

xanthine dehydrogenase, small subunit; Members of this protein family are the small subunit (or, in eukaryotes, the N-terminal domain) of xanthine dehydrogenase, an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and [Purines, pyrimidines, nucleosides, and nucleotides, Other]


Pssm-ID: 274365 [Multi-domain]  Cd Length: 467  Bit Score: 807.65  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135   5 IRFILNGEDIELTDVGPTETLLDFLRLKRRLTGTKEGCAEGDCGACTVLVGRLVDG-KLAYESVNACIRFTGSLHATHVV 83
Cdd:TIGR02963   1 IRFFLNGETVTLSDVDPTRTLLDYLREDAGLTGTKEGCAEGDCGACTVVVGELVDGgKLRYRSVNACIQFLPSLDGKAVV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  84 TVEHLAGRDGALHPVQQALVDCHGSQCGFCTPGFVMSLYGLWLTKEKPGRREIEKALQGNLCRCTGYEPIVKAAEQVSLM 163
Cdd:TIGR02963  81 TVEDLRQPDGRLHPVQQAMVECHGSQCGFCTPGFVMSLYALYKNSPAPSRADIEDALQGNLCRCTGYRPILDAAEAAFDY 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 164 RPSalfDPLERTRSEIIARLWAMQASGTIRIAKGEDRLIVPASVQALAEVLSQEPDATVVAGSTDVGLWVTKQMRRLSPV 243
Cdd:TIGR02963 161 PCS---DPLDADRAPIIERLRALRAGETVELNFGGERFIAPTTLDDLAALKAAHPDARIVAGSTDVGLWVTKQMRDLPDV 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 244 VFINHLSELQTVTESEDGVTIGAGVSYTRAFEAIARKIPALGRLIDRIGGEQVRNMGTIGGNIANGSPIGDSPPPLIALG 323
Cdd:TIGR02963 238 IYVGQVAELKRIEETDDGIEIGAAVTLTDAYAALAKRYPELGELLRRFASLQIRNAGTLGGNIANGSPIGDSPPALIALG 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 324 ATLTLRSLEGQRKIPLEDFFIAYGKQDRKPGEFVESVFVPYPAN-SRFAAYKITKRRDEDITAVLGAFLLTLDDaEIVTD 402
Cdd:TIGR02963 318 ARLTLRKGEGRRTLPLEDFFIDYGKTDRQPGEFVEALHVPRPTPgERFRAYKISKRFDDDISAVCAAFNLELDG-GVVAE 396
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2083981135 403 IRIAYGGMAATPKRARTVETELIGKSWTEATIEAARPAFDVDFQPLTDWRATAEYRQLTAKNLLTRFYLET 473
Cdd:TIGR02963 397 IRIAFGGMAATPKRAAATEAALLGKPWNEATVEAAMAALAGDFTPLSDMRASAEYRLLTAKNLLRRFFLET 467
PLN02906 PLN02906
xanthine dehydrogenase
24-475 5.41e-101

xanthine dehydrogenase


Pssm-ID: 215491 [Multi-domain]  Cd Length: 1319  Bit Score: 329.74  E-value: 5.41e-101
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135   24 TLLDFLRlKRRLTGTKEGCAEGDCGACTVLVGRL--VDGKLAYESVNACIRFTGSLHATHVVTVEHLAGRDGALHPVQQA 101
Cdd:PLN02906     3 TLLEYLR-DLGLTGTKLGCGEGGCGACTVMVSHYdrKTGKCVHYAVNACLAPLYSVEGMHVITVEGIGNRRDGLHPVQEA 81
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  102 LVDCHGSQCGFCTPGFVMSLYGLWLT-KEKPGRREIEKALQGNLCRCTGYEPIVKAA--------------EQVSL---- 162
Cdd:PLN02906    82 LASMHGSQCGFCTPGFIMSMYALLRSsKTPPTEEQIEECLAGNLCRCTGYRPILDAFrvfaktddalytgvSSLSLqdge 161
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  163 ---------------------MRPSALFDPLE--------RTRSEII------ARLWAMQASGTiriaKGEDRLIVPASV 207
Cdd:PLN02906   162 picpstgkpcscgskttsaagTCKSDRFQPISyseidgswYTEKELIfppellLRKLTPLKLLG----NGGLTWYRPTSL 237
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  208 QALAEVLSQEPDATVVAGSTDVGLwvtkQMR--RLSPVVFIN--HLSELQTVTESEDGVTIGAGVSYT---RAFEAI--- 277
Cdd:PLN02906   238 QHLLELKAEYPDAKLVVGNTEVGI----EMRfkNAQYPVLISptHVPELNAIKVKDDGLEIGAAVRLSelqNLFRKVvke 313
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  278 --ARKIPALGRLIDRI---GGEQVRNMGTIGGNIANGSPIGDSPPPLIALGATLTLRSLEG-QRKIPLEDFFIAYGKQDR 351
Cdd:PLN02906   314 rpAHETSACKAFIEQLkwfAGTQIRNVASIGGNICTASPISDLNPLWMAAGATFVIISCDGdIRSVPASDFFLGYRKVDL 393
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  352 KPGEFVESVFVPYPANSRFAA-YKITKRRDEDITAVLGAFLLTLDDAE---IVTDIRIAYGGMAATPKRARTVETELIGK 427
Cdd:PLN02906   394 KPDEILLSVFLPWTRPFEYVKeFKQAHRRDDDIAIVNAGMRVKLEEKDgewIVSDASIAYGGVAPLSVSARKTEEFLIGK 473
                          490       500       510       520       530
                   ....*....|....*....|....*....|....*....|....*....|
gi 2083981135  428 SWTEATIEAARPAFDVDFqPLTDWR--ATAEYRQLTAKNLLTRFYLETVG 475
Cdd:PLN02906   474 PWNKETLQDALKVLQKDI-LIKEDApgGMVEFRKSLALSFFFKFFLWVSH 522
CutB COG1319
Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit [Energy production and conversion] ...
204-468 3.01e-80

Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit [Energy production and conversion]; Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 440930 [Multi-domain]  Cd Length: 285  Bit Score: 251.20  E-value: 3.01e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 204 PASVQALAEVLSQ-EPDATVVAGSTDVGLWVTKQMRRLSPVVFINHLSELQTVTESEDGVTIGAGVSYTR--AFEAIARK 280
Cdd:COG1319     9 PTSLEEALALLAEhGPDARVLAGGTDLLPLMKLRLARPEHLVDINRIPELRGIEEEGGGLRIGALVTHAElaASPLVRER 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 281 IPALGRLIDRIGGEQVRNMGTIGGNIANGSPIGDSPPPLIALGATLTLRSLEGQRKIPLEDFFIAYGKQDRKPGEFVESV 360
Cdd:COG1319    89 YPLLAEAARAIASPQIRNRGTIGGNLANADPAADLPPALLALDATVELAGPDGERTIPAADFFLGPGETALEPGELITAV 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 361 FVPYPANSRFAAY-KITKRRDEDITAVLGAFLLTLDDaEIVTDIRIAYGGMAATPKRARTVETELIGKSWTEATIEAARP 439
Cdd:COG1319   169 RLPAPPAGAGSAYlKVGRRASDAIALVSVAVALRLDG-GTIRDARIALGGVAPTPWRAREAEAALAGKPLSEEAIEAAAE 247
                         250       260
                  ....*....|....*....|....*....
gi 2083981135 440 AFDVDFQPLTDWRATAEYRQLTAKNLLTR 468
Cdd:COG1319   248 AAAAAADPIDDVRASAEYRRHLARVLVRR 276
mam_aldehyde_ox TIGR02969
aldehyde oxidase; Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, ...
7-472 4.20e-78

aldehyde oxidase; Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase.


Pssm-ID: 132014 [Multi-domain]  Cd Length: 1330  Bit Score: 265.72  E-value: 4.20e-78
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135    7 FILNGEDIELTDVGPTETLLDFLRLKRRLTGTKEGCAEGDCGACTVLVGRL--VDGKLAYESVNACIRFTGSLHATHVVT 84
Cdd:TIGR02969    5 FYVNGRKVVEKNVDPETMLLPYLRKKLRLTGTKYGCGGGGCGACTVMISRYnpSTKSIRHHPVNACLTPICSLYGAAVTT 84
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135   85 VEHLAGRDGALHPVQQALVDCHGSQCGFCTPGFVMSLYGLWLTKEKPGRREIEKALQGNLCRCTGYEPIVKAA------- 157
Cdd:TIGR02969   85 VEGIGSTRTRLHPVQERIAKCHGTQCGFCTPGMVMSMYALLRNHPEPTLDQLTDALGGNLCRCTGYRPIIDACktfckts 164
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  158 -----------------------EQVSLMRPSAL----FDPLERTRSEI----IARLWAMQASGTiRIAKGEDRL-IVPA 205
Cdd:TIGR02969  165 gccqskengvccldqginglpefEEGDETSPELFseeeFLPLDPTQELIfppeLMRMAEKQPQRT-RVFYSERMMwISPV 243
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  206 SVQALAEVLSQEPDATVVAGSTDVGLWVtKQMRRLSPVVFI-NHLSELQTVTESEDGVTIGAGVSYTRAFEAIA---RKI 281
Cdd:TIGR02969  244 TLKELLEAKFKYPQAPVVMGNTSVGPEV-KFKGVFHPVIISpDRIEELSVVNHTGDGLTLGAGLSLAQVKDILAdvvQKL 322
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  282 P--------ALGRLIDRIGGEQVRNMGTIGGNIANGSPIGDSPPPLIALGATLTLRSLEGQRKIPL-EDFFIAYGKQDRK 352
Cdd:TIGR02969  323 PeettqtyrALLKHLGTLAGSQIRNMASLGGHIISRHLDSDLNPLLAVGNCTLNLLSKEGKRQIPLsEQFLSKCPDADLK 402
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  353 PGEFVESVFVPYPANSRFAAYKITKRRDEDITAVL--GAFLLTLDDAEIVTDIRIAYGGMAATPKRARTVETELIGKSWT 430
Cdd:TIGR02969  403 PQEILVSVNIPYSRKWEFVSAFRQAQRQQNALAIVnsGMRVFFGEGDGIIRELSISYGGVGPTTICAKNSCQKLIGRPWN 482
                          490       500       510       520
                   ....*....|....*....|....*....|....*....|...
gi 2083981135  431 EATIE-AARPAFDVDFQPLTDWRATAEYRQLTAKNLLTRFYLE 472
Cdd:TIGR02969  483 EEMLDtACRLILDEVSLAGSAPGGKVEFKRTLIISFLFKFYLE 525
FAD_binding_5 pfam00941
FAD binding domain in molybdopterin dehydrogenase;
200-365 1.31e-71

FAD binding domain in molybdopterin dehydrogenase;


Pssm-ID: 460007 [Multi-domain]  Cd Length: 170  Bit Score: 224.73  E-value: 1.31e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 200 RLIVPASVQALAEVLSQEPDATVVAGSTDVGLWVTKQMRRLSPVVFINHLSELQTVTESEDGVTIGAGVSYTRAFEA-IA 278
Cdd:pfam00941   4 GYYRPASLAEALELLAAGPDAKLVAGGTSLGPLMKLRLARPDHLIDINGIPELRGIEETDGGLEIGAAVTLSEIAEPlLR 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 279 RKIPALGRLIDRIGGEQVRNMGTIGGNIANGSPIGDSPPPLIALGATLTLRSLEGQRKIPLEDFFIAYGKQDRKPGEFVE 358
Cdd:pfam00941  84 EAYPALSEALRKIASPQIRNVGTIGGNIANASPISDLPPALLALDAKVELRSGEGERTVPLEDFFLGYGKTALEPGELIT 163

                  ....*..
gi 2083981135 359 SVFVPYP 365
Cdd:pfam00941 164 AVIIPLP 170
CutS COG2080
Aldehyde, CO, or xanthine dehydrogenase, Fe-S subunit, CoxS/CutS family [Energy production and ...
5-165 1.22e-62

Aldehyde, CO, or xanthine dehydrogenase, Fe-S subunit, CoxS/CutS family [Energy production and conversion]; Aldehyde, CO, or xanthine dehydrogenase, Fe-S subunit, CoxS/CutS family is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 441683 [Multi-domain]  Cd Length: 155  Bit Score: 200.70  E-value: 1.22e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135   5 IRFILNGEDIELtDVGPTETLLDFLRLKRRLTGTKEGCAEGDCGACTVLVgrlvDGKlayeSVNACIRFTGSLHATHVVT 84
Cdd:COG2080     4 ITLTVNGKPVEV-DVDPDTPLLDVLRDDLGLTGTKFGCGHGQCGACTVLV----DGK----AVRSCLTLAVQADGKEITT 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  85 VEHLAgRDGALHPVQQALVDCHGSQCGFCTPGFVMSLYGLWLTKEKPGRREIEKALQGNLCRCTGYEPIVKAAEQVSLMR 164
Cdd:COG2080    75 IEGLA-EDGELHPLQQAFIEHGALQCGYCTPGMIMAAVALLDENPNPTEEEIREALSGNLCRCTGYVRIVRAVKRAAAAL 153

                  .
gi 2083981135 165 P 165
Cdd:COG2080   154 R 154
PLN00192 PLN00192
aldehyde oxidase
2-438 1.60e-59

aldehyde oxidase


Pssm-ID: 215096 [Multi-domain]  Cd Length: 1344  Bit Score: 211.88  E-value: 1.60e-59
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135    2 NDSIRFILNGEDIELTDVGPTETLLDFLRLKRRLTGTKEGCAEGDCGACTVLVGRL--VDGKLAYESVNACIRFTGSLHA 79
Cdd:PLN00192     3 NMSLVFAVNGERFELSSVDPSTTLLEFLRTQTPFKSVKLGCGEGGCGACVVLLSKYdpVLDQVEDFTVSSCLTLLCSVNG 82
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135   80 THVVTVEHLAGRDGALHPVQQALVDCHGSQCGFCTPGFVMSLYGLWLTKEKPGRR------------EIEKALQGNLCRC 147
Cdd:PLN00192    83 CSITTSEGLGNSKDGFHPIHKRFAGFHASQCGFCTPGMCISLFSALVNADKTDRPeppsgfskltvvEAEKAVSGNLCRC 162
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  148 TGYEPIVKA----AEQVSLmrpSAL----FDPLERTRSEIIARLWAMQASGTI---------------RIAKGEDRLIVP 204
Cdd:PLN00192   163 TGYRPIVDAcksfAADVDI---EDLglnsFWKKGESEEAKLSKLPPYNHSDHIctfpeflkkeiksslLLDSSRYRWYTP 239
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  205 ASVQALAEVL-SQEPDAT---VVAGSTDVGlwVTKQMRRLSPVVFINHLSELQTVTESEDGVTIGAGVSYTRAFEA---- 276
Cdd:PLN00192   240 VSVEELQSLLeSNNFDGVsvkLVVGNTGTG--YYKDEELYDKYIDIRHIPELSMIRRDEKGIEIGAVVTISKAIEAlree 317
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  277 -----IARKIpalGRLIDRIGGEQVRNMGTIGGNI--ANGSPI-GDSPPPLIALGATLTLRSLEGQRKIPLEDFFiaygk 348
Cdd:PLN00192   318 skseyVFKKI---ADHMEKIASRFVRNTGSIGGNLvmAQRKQFpSDIATILLAAGSTVNIQNASKREKLTLEEFL----- 389
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  349 qDRKPGE---FVESVFVPYPANSR-------FAAYKITKRRDEDITAVL-GAFL-----LTLDDAEIVTDIRIAYGGMAA 412
Cdd:PLN00192   390 -ERPPLDsksLLLSVEIPSWTSSSgsdtkllFETYRAAPRPLGNALPYLnAAFLaevsqDASSGGIVVNDCRLAFGAYGT 468
                          490       500
                   ....*....|....*....|....*...
gi 2083981135  413 T-PKRARTVETELIGKSWTEATI-EAAR 438
Cdd:PLN00192   469 KhAIRARKVEEFLTGKVLSDSVLyEAVR 496
PRK09971 PRK09971
xanthine dehydrogenase subunit XdhB; Provisional
204-476 2.53e-52

xanthine dehydrogenase subunit XdhB; Provisional


Pssm-ID: 182175 [Multi-domain]  Cd Length: 291  Bit Score: 178.69  E-value: 2.53e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 204 PASVQALAEVLSQEPDATVVAGSTDVGLWVTKQMRRLSPVVFINHLSELQTVTESEDG-VTIGAGVSYTRAFE--AIARK 280
Cdd:PRK09971   10 AATLEEAIELLADNPQAKLIAGGTDVLIQLHHHNDRYRHLVSIHNIAELRGITLAEDGsIRIGAATTFTQIIEdpIIQKH 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 281 IPALGRLIDRIGGEQVRNMGTIGGNIANGSPIGDSPPPLIALGATLTLRSLEGQRKIPLEDFFIAYGKQDRKPGEFVESV 360
Cdd:PRK09971   90 LPALAEAAVSIGGPQIRNVATIGGNICNGATSADSAPPLFALDAKLEIHSPNGVRFVPINGFYTGPGKVSLEHDEILVAF 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 361 -FVPYPANSRFAAY-KITKRRDEDITAVLGAFLLTLDDAEIvTDIRIAYGGMAATPKRARTVETELIGKSWTEATIEAAR 438
Cdd:PRK09971  170 iIPPEPYEHAGGAYiKYAMRDAMDIATIGCAVLCRLDNGNF-EDLRLAFGVAAPTPIRCQHAEQTAKGAPLNLETLEAIG 248
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 2083981135 439 PAFDVDFQPLTDWRATAEYRQLTAKNLLTRFYLETVGA 476
Cdd:PRK09971  249 ELVLQDVAPRSSWRASKEFRLHLIQELTKRVIKEAVAA 286
glyceraldDH_beta NF041019
glyceraldehyde dehydrogenase subunit beta;
202-468 9.74e-45

glyceraldehyde dehydrogenase subunit beta;


Pssm-ID: 468948 [Multi-domain]  Cd Length: 280  Bit Score: 158.20  E-value: 9.74e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 202 IVPASVQALAEVLSQEPDATVVAGSTDvgLWVTKQMRRLSP--VVFINHLSELQTVTESEDGVTIGAgvsYTRAFEAIAR 279
Cdd:NF041019    9 VRPDSLDEALDFLEKHEDAKPLAGGQS--LIPMLKLRIIRPsyLVDINRLKELSYIKDEGNEVRIGA---LTTHYEISKN 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 280 -----KIPALGRLIDRIGGEQVRNMGTIGGNIANGSPIGDSPPPLIALGATLTLRSLEGQRKIPLEDFFIAYGKQDRKPG 354
Cdd:NF041019   84 divksNLPLLSEAASKIGDPQVRNMGTIGGSLSNADPAADYPAVLLALDAKVVIRSKSGEREVKAKDFFKGPFTTDLNQG 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 355 EFVESVFVPYPANSRFaAYKITKRRDEDITAVLGAFLLTLDDaEIVTDIRIAYGGMAATPKRARTVETELIGKSWTEATI 434
Cdd:NF041019  164 EIVTEIVVPALKGYKT-SYQKLVRRAGDFAIVGVAVLLKVSG-GVVEDVRIAYTGVNDKPYRAKEAEKALKGKKLSEELI 241
                         250       260       270
                  ....*....|....*....|....*....|....
gi 2083981135 435 EAARPAFDVDFQPLTDWRATAEYRQLTAKNLLTR 468
Cdd:NF041019  242 EKAAEKASEGANPPSDIRGSSEYRKKVMKVLTKR 275
glyceraldDH_gamma NF041020
glyceraldehyde dehydrogenase subunit gamma;
5-161 1.48e-40

glyceraldehyde dehydrogenase subunit gamma;


Pssm-ID: 468949 [Multi-domain]  Cd Length: 162  Bit Score: 143.01  E-value: 1.48e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135   5 IRFILNGEDIElTDVGPTETLLDFLRLKRRLTGTKEGCAEGDCGACTVLVgrlvDGKlayeSVNACIRFTGSLHATHVVT 84
Cdd:NF041020   11 IRVKVNGVWYE-AEVEPRKLLVHFLRDDLGFTGTHVGCDTSTCGACTVIM----NGK----SVKSCTVLAVQADGAEITT 81
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2083981135  85 VEHLAgRDGALHPVQQALVDCHGSQCGFCTPGFVMSLYglWLTKEK--PGRREIEKALQGNLCRCTGYEPIVKAAEQVS 161
Cdd:NF041020   82 IEGLS-KDGKLHPIQEAFWENHALQCGYCTPGMIMQAY--FLLKENpnPTEEEIRDGIHGNLCRCTGYQNIVKAVKEAS 157
CO_deh_flav_C pfam03450
CO dehydrogenase flavoprotein C-terminal domain;
371-473 4.63e-37

CO dehydrogenase flavoprotein C-terminal domain;


Pssm-ID: 460921 [Multi-domain]  Cd Length: 102  Bit Score: 131.53  E-value: 4.63e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135 371 AAYKITKRRDEDITAVLGAFLLTLDDAeIVTDIRIAYGGMAATPKRARTVETELIGKSWTEATIEAARPAFDVDFQPLTD 450
Cdd:pfam03450   1 AAYKQAKRRDDDIAIVNAAFRVRLDGG-TVEDARIAFGGVAPTPIRATEAEAALIGKPWDEETLEAAAALLLEDLSPLSD 79
                          90       100
                  ....*....|....*....|...
gi 2083981135 451 WRATAEYRQLTAKNLLTRFYLET 473
Cdd:pfam03450  80 PRGSAEYRRHLARSLLFRFLLEA 102
Fer2_2 pfam01799
[2Fe-2S] binding domain;
84-157 1.62e-34

[2Fe-2S] binding domain;


Pssm-ID: 460336 [Multi-domain]  Cd Length: 73  Bit Score: 123.69  E-value: 1.62e-34
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2083981135  84 TVEHLAGRDGalHPVQQALVDCHGSQCGFCTPGFVMSLYGLWLTKE-KPGRREIEKALQGNLCRCTGYEPIVKAA 157
Cdd:pfam01799   1 TIEGLAESGG--EPVQQAFAEAGAVQCGYCTPGMIMSAYALLERNPpPPTEAEIREALSGNLCRCTGYRRIVDAV 73
pucE TIGR03198
xanthine dehydrogenase E subunit; This gene has been characterized in B. subtilis as the ...
4-160 5.08e-34

xanthine dehydrogenase E subunit; This gene has been characterized in B. subtilis as the Iron-sulfur cluster binding-subunit of xanthine dehydrogenase (pucE), acting in conjunction with pucC, the FAD-binding subunit and pucD, the molybdopterin binding subunit. The more common XDH complex (GenProp0640) includes the xdhA gene as the Fe-S cluster binding component.


Pssm-ID: 132242 [Multi-domain]  Cd Length: 151  Bit Score: 125.35  E-value: 5.08e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135   4 SIRFILNGEDIELTDVgPTETLLDFLRLKRRLTGTKEGCAEGDCGACTVLVgrlvDGKLAyesvNACIRFTGSLHATHVV 83
Cdd:TIGR03198   3 QFRFTVNGQAWEVAAV-PTTRLSDLLRKELQLTGTKVSCGIGRCGACSVLI----DGKLA----NACLTMAYQADGHEIT 73
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2083981135  84 TVEHLAgrDGALHPVQQALVDCHGSQCGFCTPGFVMSLYGLWLTKEKPGRREIEKALQGNLCRCTGYEPIVKAAEQV 160
Cdd:TIGR03198  74 TIEGIA--ENELDPCQTAFLEEGGFQCGYCTPGMVVALKALFRETPQPSDEDMEEGLSGNLCRCTGYGGIIRSACRI 148
4hydroxCoAred TIGR03193
4-hydroxybenzoyl-CoA reductase, gamma subunit; 4-hydroxybenzoyl-CoA reductase converts ...
25-158 2.08e-33

4-hydroxybenzoyl-CoA reductase, gamma subunit; 4-hydroxybenzoyl-CoA reductase converts 4-hydroxybenzoyl-CoA to benzoyl-CoA, a common intermediate in the degradation of aromatic compounds. This protein family represents the gamma chain of this three-subunit enzyme.


Pssm-ID: 132237 [Multi-domain]  Cd Length: 148  Bit Score: 123.45  E-value: 2.08e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  25 LLDFLRLKRRLTGTKEGCAEGDCGACTVLVgrlvDGklayESVNACIRFTGSLHATHVVTVEHLAGrDGALHPVQQALVD 104
Cdd:TIGR03193  21 LVDYLRDTVGLTGTKQGCDGGECGACTVLV----DG----RPRLACSTLAHRVAGRKVETVEGLAT-NGRLSRLQQAFHE 91
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2083981135 105 CHGSQCGFCTPGFVMSLYGLWLTKEKPGRREIEKALQGNLCRCTGYEPIVKAAE 158
Cdd:TIGR03193  92 RLGTQCGFCTPGMIMAAEALLRRNPSPSRDEIRAALAGNLCRCTGYVKIIESVE 145
Se_dep_XDH TIGR03311
selenium-dependent xanthine dehydrogenase; Members of this protein resemble conventional ...
7-158 1.02e-32

selenium-dependent xanthine dehydrogenase; Members of this protein resemble conventional xanthine dehydrogenase enzymes, which depend on molybdenum cofactor - molybdopterin bound to molybdate with two sulfur atoms as ligands. But all members of this family occur in species that contain markers for the biosynthesis of enzymes with a selenium-containing form of molybdenum cofactor. The member of this family from Enterococcus faecalis has been shown to act as a xanthine dehydrogenenase, and its activity if dependent on SelD (selenophosphate synthase), selenium, and molybdenum. [Purines, pyrimidines, nucleosides, and nucleotides, Other]


Pssm-ID: 132354 [Multi-domain]  Cd Length: 848  Bit Score: 132.27  E-value: 1.02e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135   7 FILNGEDIeltDVGPTETLLDFLRLKRRLTGTKEGCAEGDCGACTVLVgrlvDGKlayeSVNACIRFTGSLHATHVVTVE 86
Cdd:TIGR03311   3 FIVNGREV---DVNEEKKLLEFLREDLRLTGVKNGCGEGACGACTVIV----NGK----AVRACRFTTAKLAGKEITTVE 71
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2083981135  87 HLAGRDGALHpvQQALVDCHGSQCGFCTPGFVMSLYGLWLTKEKPGRREIEKALQGNLCRCTGYEPIVKAAE 158
Cdd:TIGR03311  72 GLTEREKDVY--AWAFAKAGAVQCGFCIPGMVISAKALLDKNPNPTEAEIKKALKGNICRCTGYVKIIKAVR 141
PRK09908 PRK09908
xanthine dehydrogenase iron sulfur-binding subunit XdhC;
4-156 8.02e-31

xanthine dehydrogenase iron sulfur-binding subunit XdhC;


Pssm-ID: 182139 [Multi-domain]  Cd Length: 159  Bit Score: 116.94  E-value: 8.02e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135   4 SIRFILNGEDIELTdVGPTETLLDFLRlKRRLTGTKEGCAEGDCGACTVLVgrlvDGKlayeSVNACIRFTGSLHATHVV 83
Cdd:PRK09908    8 TIECTINGMPFQLH-AAPGTPLSELLR-EQGLLSVKQGCCVGECGACTVLV----DGT----AIDSCLYLAAWAEGKEIR 77
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2083981135  84 TVEHLaGRDGALHPVQQALVDCHGSQCGFCTPGFVMSLYGLWltkEKPGRR-----EIEKALQGNLCRCTGYEPIVKA 156
Cdd:PRK09908   78 TLEGE-AKGGKLSHVQQAYAKSGAVQCGFCTPGLIMATTAML---AKPREKpltitEIRRGLAGNLCRCTGYQMIVNT 151
CO_deh_flav_C smart01092
CO dehydrogenase flavoprotein C-terminal domain;
372-473 1.45e-30

CO dehydrogenase flavoprotein C-terminal domain;


Pssm-ID: 215021 [Multi-domain]  Cd Length: 102  Bit Score: 114.25  E-value: 1.45e-30
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  372 AYKITKRRDEDITAVLGAFLLTLDDaEIVTDIRIAYGGMAATPKRARTVETELIGKSWTEATI-EAARPAFDVDFQPLTD 450
Cdd:smart01092   1 AYKKSRRRDGDIALVSAAVALTLDG-GRVTEARIALGGVAPTPKRAAEAEAALVGKPLTDEALaRAAAAALAQDFTPLSD 79
                           90       100
                   ....*....|....*....|...
gi 2083981135  451 WRATAEYRQLTAKNLLTRFYLET 473
Cdd:smart01092  80 MRASAEYRRQLAANLLRRALLEA 102
PRK11433 PRK11433
aldehyde oxidoreductase 2Fe-2S subunit; Provisional
7-161 3.97e-26

aldehyde oxidoreductase 2Fe-2S subunit; Provisional


Pssm-ID: 236910 [Multi-domain]  Cd Length: 217  Bit Score: 105.62  E-value: 3.97e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135   7 FILNGEDIELtDVGPTETLLDFLRLKRRLTGTKEGCAEGDCGACTVlvgrLVDGklayESVNACIrftgSLHATH----V 82
Cdd:PRK11433   54 LKVNGKTEQL-EVDTRTTLLDALREHLHLTGTKKGCDHGQCGACTV----LVNG----RRLNACL----TLAVMHqgaeI 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  83 VTVEHLaGRDGALHPVQQALVDCHGSQCGFCTPGFVMSLYGLwLTKEKPG----------------RREIEKALQGNLCR 146
Cdd:PRK11433  121 TTIEGL-GSPDNLHPMQAAFVKHDGFQCGYCTPGQICSSVAV-LKEIKDGipshvtvdltaapeltADEIRERMSGNICR 198
                         170
                  ....*....|....*
gi 2083981135 147 CTGYEPIVKAAEQVS 161
Cdd:PRK11433  199 CGAYSNILEAIEDVA 213
PRK09800 PRK09800
putative hypoxanthine oxidase; Provisional
4-158 3.58e-08

putative hypoxanthine oxidase; Provisional


Pssm-ID: 182084 [Multi-domain]  Cd Length: 956  Bit Score: 55.99  E-value: 3.58e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135   4 SIRFILNGEDIELTdVGPTETLLDFLRLKRRLTGTKEGCAEGDCGACTVLVgrlvDGKLayesVNACIRFTGSLHATHVV 83
Cdd:PRK09800    2 IIHFTLNGAPQELT-VNPGENVQKLLFNMGMHSVRNSDDGFGFAGSDAIIF----NGNI----VNASLLIAAQLEKADIR 72
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2083981135  84 TVEHLaGRDGALHPVQQALVDCHGSQCGFCTPGFVMSLYGLWLTKEKPGRREIEKALQGNLCRCTGYEPIVKAAE 158
Cdd:PRK09800   73 TAESL-GKWNELSLVQQAMVDVGVVQSGYNDPAAALIITDLLDRIAAPTREEIDDALSGLFSRDAGWQQYYQVIE 146
fer2 cd00207
2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in ...
5-71 4.58e-05

2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis and ferredoxins, which participate in redox chains (from bacteria to mammals). Fold is ismilar to thioredoxin.


Pssm-ID: 238126 [Multi-domain]  Cd Length: 84  Bit Score: 42.00  E-value: 4.58e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2083981135   5 IRFILNGEDIELtDVGPTETLLDFLRlkRRLTGTKEGCAEGDCGACTVLV----------GRLVDGKLAYESVNACI 71
Cdd:cd00207     1 VTINVPGSGVEV-EVPEGETLLDAAR--EAGIDIPYSCRAGACGTCKVEVvegevdqsdpSLLDEEEAEGGYVLACQ 74
Fer2 pfam00111
2Fe-2S iron-sulfur cluster binding domain;
7-54 2.54e-04

2Fe-2S iron-sulfur cluster binding domain;


Pssm-ID: 395061 [Multi-domain]  Cd Length: 77  Bit Score: 39.43  E-value: 2.54e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 2083981135   7 FILNGEDIELTDVGPTETLLDFLRlkRRLTGTKEGCAEGDCGACTVLV 54
Cdd:pfam00111   1 VTINGKGVTIEVPDGETTLLDAAE--EAGIDIPYSCRGGGCGTCAVKV 46
Fer2_3 pfam13085
2Fe-2S iron-sulfur cluster binding domain; The 2Fe-2S ferredoxin family have a general core ...
18-103 2.06e-03

2Fe-2S iron-sulfur cluster binding domain; The 2Fe-2S ferredoxin family have a general core structure consisting of beta(2)-alpha-beta(2) which abeta-grasp type fold. The domain is around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated.


Pssm-ID: 432963 [Multi-domain]  Cd Length: 107  Bit Score: 37.60  E-value: 2.06e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2083981135  18 DVGPTETLLDFL-RLKRRLTGT---KEGCAEGDCGACTVlvgrLVDGKlayeSVNACIRFTGSLHATHvVTVEHLAGrdg 93
Cdd:pfam13085  24 PYEEGMTVLDALnKIKEEQDPTlafRRSCREGICGSCAM----NINGK----PRLACKTLIDDLLGQD-ITLEPLPG--- 91
                          90
                  ....*....|
gi 2083981135  94 alHPVQQALV 103
Cdd:pfam13085  92 --FPVIRDLV 99
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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