NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|2106313143|ref|WP_225418044|]
View 

APC family permease [Levilactobacillus huananensis]

Protein Classification

APC family permease( domain architecture ID 11425014)

APC (amino acid/polyamine/organocation) family permease is involved in the uptake of a specific amino acid and/or polyamine substrate with the concomitant import of a proton

Gene Ontology:  GO:0016020|GO:0055085|GO:0022857|GO:0015171|GO:0006865
PubMed:  23177982|24038584|25043943|10931886
SCOP:  4006243
TCDB:  2.A.3.1|2.A.3

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
1-451 2.28e-72

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


:

Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 236.72  E-value: 2.28e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   1 MSLFSLVMLTLSAIIGSGWLFGAGMAAQIAGPAAILSWILGAVIIGLIALNYIELGTMFPTSGGMSQYAAFSHGPLLGFV 80
Cdd:COG0531    13 LGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGPLLGFL 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  81 AGWANWLSLLTIIPIEAVAAVQYMSS-WPWSWANWtrgflkdgditnqglvIVFLFILAFTLLNFWSVKLLTRFTSFISI 159
Cdd:COG0531    93 AGWALLLSYVLAVAAVAVAFGGYLSSlFPAGGSVL----------------IALVLILLLTLLNLRGVKESAKVNNILTV 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 160 FKLGIPTLTIIVlmatGFQSGNFGHNAGFMPNGSAAIFSATTAAGIIFSYNAFQTTINMGNEIEHPERNILWGIVIAFSI 239
Cdd:COG0531   157 LKLLVLLLFIVV----GLFAFDPANFTPFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLI 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 240 SALIYTLLQVAFIGAVPGHYLAhgwqgvNFESPFANLAILMNLGWLSTLLYLDAFVSPFGTGVSFVATTSRALAAMTGTK 319
Cdd:COG0531   233 VGVLYILVSLALTGVVPYDELA------ASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDG 306

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 320 HMPTKLGELNRKYQTPRRAMVVNMILGVVLVAGFR-NWSALSNVISTSTLIAYLTGPVTVSTLRRDAPEFSRPFRLWGLq 398
Cdd:COG0531   307 LLPKVFAKVHPRFGTPVNAILLTGVIALLLLLLGAaSFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFRVPLP- 385

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2106313143 399 LWSPLAYVLASLAIYWAKWPTTIEVFGVIALGLICYVYYEFRQPAGWTALRAS 451
Cdd:COG0531   386 LIPILGILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRHPKLLKEAEEE 438
 
Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
1-451 2.28e-72

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 236.72  E-value: 2.28e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   1 MSLFSLVMLTLSAIIGSGWLFGAGMAAQIAGPAAILSWILGAVIIGLIALNYIELGTMFPTSGGMSQYAAFSHGPLLGFV 80
Cdd:COG0531    13 LGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGPLLGFL 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  81 AGWANWLSLLTIIPIEAVAAVQYMSS-WPWSWANWtrgflkdgditnqglvIVFLFILAFTLLNFWSVKLLTRFTSFISI 159
Cdd:COG0531    93 AGWALLLSYVLAVAAVAVAFGGYLSSlFPAGGSVL----------------IALVLILLLTLLNLRGVKESAKVNNILTV 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 160 FKLGIPTLTIIVlmatGFQSGNFGHNAGFMPNGSAAIFSATTAAGIIFSYNAFQTTINMGNEIEHPERNILWGIVIAFSI 239
Cdd:COG0531   157 LKLLVLLLFIVV----GLFAFDPANFTPFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLI 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 240 SALIYTLLQVAFIGAVPGHYLAhgwqgvNFESPFANLAILMNLGWLSTLLYLDAFVSPFGTGVSFVATTSRALAAMTGTK 319
Cdd:COG0531   233 VGVLYILVSLALTGVVPYDELA------ASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDG 306

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 320 HMPTKLGELNRKYQTPRRAMVVNMILGVVLVAGFR-NWSALSNVISTSTLIAYLTGPVTVSTLRRDAPEFSRPFRLWGLq 398
Cdd:COG0531   307 LLPKVFAKVHPRFGTPVNAILLTGVIALLLLLLGAaSFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFRVPLP- 385

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2106313143 399 LWSPLAYVLASLAIYWAKWPTTIEVFGVIALGLICYVYYEFRQPAGWTALRAS 451
Cdd:COG0531   386 LIPILGILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRHPKLLKEAEEE 438
AA_permease_2 pfam13520
Amino acid permease;
2-419 2.37e-27

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 114.33  E-value: 2.37e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   2 SLFSLVMLTLSAIIGSGWLFGAGMAAqiAGPAAILSWILGAVIIGLI-ALNYIELGTMFPTSGGMSQYAAFSHGPLLGFV 80
Cdd:pfam13520   2 GLLSAFALVIGSVIGSGIFVAPLVAS--GGPALIVWGWIAAIIFSLAvGLVYAELSSALPRSGGIYVYLENAFGKFVAFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  81 AGWANWLSLLTIIPIEAVAAVQYMSSWpwswanwtrGFLKDGDITNQGLVIVFLFILAFTLLNFWSVKLLTRFTSFISIF 160
Cdd:pfam13520  80 AGWSNWFAYVLGLASSASVAASYLLSA---------LGPDLVPTTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGIL 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 161 KLGIPTLTIIV--LMATGFQSGNFGHNAGFMPNGSAAIFSATTAAGIIFSYNAFQTTINMGNeiEHPERNILWGIVIAFS 238
Cdd:pfam13520 151 KLLLPLILIIIlgLVTADGGGFNLLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSE--EVKKRNVPKAIFIGVI 228

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 239 ISALIYTLLQVAFIGAVPGHYLAhgwQGVNFESPFANLAILMNLGWLSTLLYLDAFVSPFGTGVSFVATTSRALAAMTGT 318
Cdd:pfam13520 229 IVGVLYILVNIAFFGVVPDDEIA---LSSGLGQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARD 305

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 319 KHMP-TKLGELNRKYQTPRRAMVVNMILGVVLVAGF----RNWSALSNVISTSTLIAYLTGPVTVSTLRRDAPEFSRPFR 393
Cdd:pfam13520 306 GVLPfSRFFAKVNKFGSPIRAIILTAILSLILLLLFllspAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRIPG 385

                         410       420
                  ....*....|....*....|....*.
gi 2106313143 394 LWglqLWSPLAYVLASLAIYWAKWPT 419
Cdd:pfam13520 386 RW---PVAIFGILFSLFLIVALFFPP 408
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
 1-382 1.71e-19

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 91.80  E-value: 1.71e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   1 MSLFSLVMLTLSAIIGSGWLFGAGMAAQI-AGPAAILSWILGAVIIGLIALNYIELGTMFPTSGGMSQYAAFSHGPLLGF 79
Cdd:TIGR00906  30 LTTWDLMALGIGSTIGAGIYVLTGEVARNdSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYVTVGELWAF 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  80 VAGWAnwLSLLTIIPIEAVAAV------QYMSSWPWSWANWTRGFLKDGDITNQGLVIVFLFILAFTLLNFwSVKLLTRF 153
Cdd:TIGR00906 110 ITGWN--LILEYVIGTAAVARSwsayfdELLNKQIGQFRRTYFKLNYDGLAEYPDFFAVCLILLLAVLLSF-GVKESAWV 186

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 154 TSFISIFKLgiptLTIIVLMATGFQSGNFGH--------NAGFMPNGSAAIFSAttAAGIIFSYNAFQTTINMGNEIEHP 225
Cdd:TIGR00906 187 NKIFTAINI----LVLLFVIIAGFTKADVANwsiteekgAGGFMPYGFTGVLSG--AATCFFAFIGFDAIATTGEEVKNP 260

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 226 ERNILWGIVIAFSISALIYTLLQVAFIGAVPghylahgWQGVNFESPFAnlAILMNLGWlSTLLYLDAFVSPFGTGVSFV 305
Cdd:TIGR00906 261 QRAIPIGIVTSLLVCFVAYFLMSAALTLMMP-------YYLLDPDAPFP--VAFEYVGW-DPAKYIVAVGALCGMSTSLL 330

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 306 ATT---SRALAAMTGTKHMPTKLGELNRKYQTPRRAMVVNMILGVVLvAGFRNWSALSNVISTSTLIAYLTGPVTVSTLR 382
Cdd:TIGR00906 331 GGMfplPRVIYAMARDGLLFKWLAQINSKTKTPINATVVSGAIAALM-AFLFDLKALVDLLSIGTLLAYSLVAACVLILR 409
frlA PRK11357
amino acid permease;
1-440 1.06e-18

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 88.76  E-value: 1.06e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   1 MSLFSLVMLTLSAIIGSGWLFGAGMAAQIAGPA--AILSWILGAVIIGLIALNYIELGTMFPTSGGMSQYAAFSHGPLLG 78
Cdd:PRK11357   10 LGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPwlTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGSRPLA 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  79 FVAGWAN-WLSLLTIIPIEAVAAVQYMSSW-PWSwanwtrgflkdgdiTNQGLVIVFLFILAFTLLNFWSVKLLTRFTSF 156
Cdd:PRK11357   90 FLSGWASfWANDAPSLSIMALAIVSNLGFLtPID--------------PLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTL 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 157 ISIFKLgIPTLTIIVLMATGFQSGNFGhNAGFMPNGSAAIFSATTA--AGIIFSYNAFQTTINMGNEIEHPERNILWGIV 234
Cdd:PRK11357  156 ITIAKI-IPFTIVIGLGIFWFKAENFA-APTTTAIGATGSFMALLAgiSATSWSYTGMASICYMTGEIKNPGKTMPRALI 233

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 235 IAFSISALIYTLLQVAFIGAVPGHYLAhgwqgvNFESPFANLA--ILMNLGWLSTLLYLDAFVSPFGTGVSFVATTSRAL 312
Cdd:PRK11357  234 GSCLLVLVLYTLLALVISGLMPFDKLA------NSETPISDALtwIPALGSTAGIFVAITAMIVILGSLSSCVMYQPRLE 307

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 313 AAMTGTKHMPTKLGELNRKYQTPRRAMVVNMILGVVLVAGfrnwSALSNVISTSTLIAYLTGPVTVSTL--RRDAPEFSR 390
Cdd:PRK11357  308 YAMAKDNLFFKCFGHVHPKYNTPDVSIILQGALGIFFIFV----SDLTSLLGYFTLVMCFKNTLTFGSIiwCRKRDDYKP 383

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2106313143 391 PFRLWGLQLWSPLAYV----LASLAIYWAKWPTTIEVFGVIALGLICYVYYEFR 440
Cdd:PRK11357  384 LWRTPAFGLMTTLAIAssliLVASTFVWAPIPGLICAVIVIATGLPAYAFWAKR 437
 
Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
1-451 2.28e-72

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 236.72  E-value: 2.28e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   1 MSLFSLVMLTLSAIIGSGWLFGAGMAAQIAGPAAILSWILGAVIIGLIALNYIELGTMFPTSGGMSQYAAFSHGPLLGFV 80
Cdd:COG0531    13 LGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGPLLGFL 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  81 AGWANWLSLLTIIPIEAVAAVQYMSS-WPWSWANWtrgflkdgditnqglvIVFLFILAFTLLNFWSVKLLTRFTSFISI 159
Cdd:COG0531    93 AGWALLLSYVLAVAAVAVAFGGYLSSlFPAGGSVL----------------IALVLILLLTLLNLRGVKESAKVNNILTV 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 160 FKLGIPTLTIIVlmatGFQSGNFGHNAGFMPNGSAAIFSATTAAGIIFSYNAFQTTINMGNEIEHPERNILWGIVIAFSI 239
Cdd:COG0531   157 LKLLVLLLFIVV----GLFAFDPANFTPFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLI 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 240 SALIYTLLQVAFIGAVPGHYLAhgwqgvNFESPFANLAILMNLGWLSTLLYLDAFVSPFGTGVSFVATTSRALAAMTGTK 319
Cdd:COG0531   233 VGVLYILVSLALTGVVPYDELA------ASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDG 306

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 320 HMPTKLGELNRKYQTPRRAMVVNMILGVVLVAGFR-NWSALSNVISTSTLIAYLTGPVTVSTLRRDAPEFSRPFRLWGLq 398
Cdd:COG0531   307 LLPKVFAKVHPRFGTPVNAILLTGVIALLLLLLGAaSFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFRVPLP- 385

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2106313143 399 LWSPLAYVLASLAIYWAKWPTTIEVFGVIALGLICYVYYEFRQPAGWTALRAS 451
Cdd:COG0531   386 LIPILGILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRHPKLLKEAEEE 438
AA_permease_2 pfam13520
Amino acid permease;
2-419 2.37e-27

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 114.33  E-value: 2.37e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   2 SLFSLVMLTLSAIIGSGWLFGAGMAAqiAGPAAILSWILGAVIIGLI-ALNYIELGTMFPTSGGMSQYAAFSHGPLLGFV 80
Cdd:pfam13520   2 GLLSAFALVIGSVIGSGIFVAPLVAS--GGPALIVWGWIAAIIFSLAvGLVYAELSSALPRSGGIYVYLENAFGKFVAFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  81 AGWANWLSLLTIIPIEAVAAVQYMSSWpwswanwtrGFLKDGDITNQGLVIVFLFILAFTLLNFWSVKLLTRFTSFISIF 160
Cdd:pfam13520  80 AGWSNWFAYVLGLASSASVAASYLLSA---------LGPDLVPTTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGIL 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 161 KLGIPTLTIIV--LMATGFQSGNFGHNAGFMPNGSAAIFSATTAAGIIFSYNAFQTTINMGNeiEHPERNILWGIVIAFS 238
Cdd:pfam13520 151 KLLLPLILIIIlgLVTADGGGFNLLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSE--EVKKRNVPKAIFIGVI 228

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 239 ISALIYTLLQVAFIGAVPGHYLAhgwQGVNFESPFANLAILMNLGWLSTLLYLDAFVSPFGTGVSFVATTSRALAAMTGT 318
Cdd:pfam13520 229 IVGVLYILVNIAFFGVVPDDEIA---LSSGLGQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARD 305

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 319 KHMP-TKLGELNRKYQTPRRAMVVNMILGVVLVAGF----RNWSALSNVISTSTLIAYLTGPVTVSTLRRDAPEFSRPFR 393
Cdd:pfam13520 306 GVLPfSRFFAKVNKFGSPIRAIILTAILSLILLLLFllspAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRIPG 385

                         410       420
                  ....*....|....*....|....*.
gi 2106313143 394 LWglqLWSPLAYVLASLAIYWAKWPT 419
Cdd:pfam13520 386 RW---PVAIFGILFSLFLIVALFFPP 408
AA_permease pfam00324
Amino acid permease;
6-413 8.52e-24

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 104.32  E-value: 8.52e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   6 LVMLTLSAIIGSGWLFGAGMAAQIAGPA-AILSWILGAVIIGLIALNYIELGTMFPTSGGMSQYAAFSHGPLLGFVAGWA 84
Cdd:pfam00324   2 VQMIALGGVIGTGLFVGSGSVLGQAGPAgALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGWN 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  85 NWLSLLTIIPIEAVAAVQYMSSWPWSWANWTRGflkdgditnqglVIVFLFILAFTLLNFWSVKLLTRFTSFISIFKLGI 164
Cdd:pfam00324  82 YWLSWITVLALELTAASILIQFWELVPDIPYLW------------VWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIA 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 165 PTLTIIVLMAT--GFQSGNFGHNAGFMPNGSAAIFSATTAAGII-------FSYNAFQTTINMGNEIEHPERNILWGIVI 235
Cdd:pfam00324 150 IIGFIIVGIILlsGGNPNDGAIFRYLGDNGGKNNFPPGFGKGFIsvfviafFAFTGIELVGIAAGEVKNPEKSIPKAILQ 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 236 AFSISALIYTLLQVAFIGAVPGHYLAHGWQGVNFESPFANLAILMNLGWLSTLLYLDAFVSPFGTGVSFVATTSRALAAM 315
Cdd:pfam00324 230 VIWRITIFYILSLLAIGLLVPWNDPGLLNDSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSL 309

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 316 TGTKHMPTKLGELNrKYQTPRRAMVVNMILGVVLV-----------AGFRNWSALSNVIS-TSTLIAYLTGPVTVSTLRR 383
Cdd:pfam00324 310 ARDGLAPKFLKKVD-KRGVPLRAILVSMVISLLALllaslnpaivfNFLLAISGLSGLIVwGLISLSHLRFRKAFKYQGR 388

                         410       420       430
                  ....*....|....*....|....*....|
gi 2106313143 384 DAPEFsrPFRLWGLQLWSplAYVLASLAIY 413
Cdd:pfam00324 389 SIDEL--PFKAPLGPLGV--ILGLAAIIII 414
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
6-351 3.54e-23

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 102.12  E-value: 3.54e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   6 LVMLTLSAIIGSGwLF-GAGMAAQIAGPAAILSWILGAVIIGLI--ALNyiELGTMFPTSGGMSQYAAFSHGPLLGFVAG 82
Cdd:COG1113    22 IQMIALGGAIGTG-LFlGSGKAIALAGPAVLLSYLIAGLIVFLVmrALG--EMAVANPVSGSFSDYAREYLGPWAGFVTG 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  83 WANWLSLLTIIPIEAVAAVQYMSSWPWSWANWtrgflkdgditnqglVIVFLFILAFTLLNFWSVKLLTRFTSFISIFKL 162
Cdd:COG1113    99 WLYWFFWVLVGMAEATAVGIYLQFWFPDVPQW---------------VWALVFLVLLTAINLLSVKLFGEFEFWFALIKV 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 163 giptLTIIV-------LMATGFQS--------GNFGHNAGFMPNGSAAIFSATtaAGIIFSYnafqttinMGNEI----- 222
Cdd:COG1113   164 ----VAIVAfivvgllLIFFGFGLpggppaglSNLWDHGGFFPNGIGGVLAAL--QIVVFAF--------GGIELvgiaa 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 223 ---EHPERNI-------LWGIVIaFSISALIytllqvAFIGAVPghylahgWQGVNF-ESPFANLAILMNLGWLSTLLYL 291
Cdd:COG1113   230 aeaKDPEKTIpkainsvIWRILL-FYVGSLF------VILALVP-------WNQIGAgGSPFVTVFSLLGIPAAAGIMNF 295

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 292 DAFVSPFGTGVSFVATTSRALAAMTGTKHMPTKLGELNRKyQTPRRAMVVNMILGVVLVA 351
Cdd:COG1113   296 VVLTAALSSLNSGLYSTSRMLYSLAERGDAPKFFGKLSKR-GVPVRAILLSAVVLLIGVV 354
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
 1-382 1.71e-19

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 91.80  E-value: 1.71e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   1 MSLFSLVMLTLSAIIGSGWLFGAGMAAQI-AGPAAILSWILGAVIIGLIALNYIELGTMFPTSGGMSQYAAFSHGPLLGF 79
Cdd:TIGR00906  30 LTTWDLMALGIGSTIGAGIYVLTGEVARNdSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYVTVGELWAF 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  80 VAGWAnwLSLLTIIPIEAVAAV------QYMSSWPWSWANWTRGFLKDGDITNQGLVIVFLFILAFTLLNFwSVKLLTRF 153
Cdd:TIGR00906 110 ITGWN--LILEYVIGTAAVARSwsayfdELLNKQIGQFRRTYFKLNYDGLAEYPDFFAVCLILLLAVLLSF-GVKESAWV 186

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 154 TSFISIFKLgiptLTIIVLMATGFQSGNFGH--------NAGFMPNGSAAIFSAttAAGIIFSYNAFQTTINMGNEIEHP 225
Cdd:TIGR00906 187 NKIFTAINI----LVLLFVIIAGFTKADVANwsiteekgAGGFMPYGFTGVLSG--AATCFFAFIGFDAIATTGEEVKNP 260

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 226 ERNILWGIVIAFSISALIYTLLQVAFIGAVPghylahgWQGVNFESPFAnlAILMNLGWlSTLLYLDAFVSPFGTGVSFV 305
Cdd:TIGR00906 261 QRAIPIGIVTSLLVCFVAYFLMSAALTLMMP-------YYLLDPDAPFP--VAFEYVGW-DPAKYIVAVGALCGMSTSLL 330

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 306 ATT---SRALAAMTGTKHMPTKLGELNRKYQTPRRAMVVNMILGVVLvAGFRNWSALSNVISTSTLIAYLTGPVTVSTLR 382
Cdd:TIGR00906 331 GGMfplPRVIYAMARDGLLFKWLAQINSKTKTPINATVVSGAIAALM-AFLFDLKALVDLLSIGTLLAYSLVAACVLILR 409
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
6-348 1.91e-19

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 91.00  E-value: 1.91e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   6 LVMLTLSAIIGSGWLFGAGMAAQIAGP-AAILSWILGAVIIGLIALNYIELGTMFPTSGGMSQYAAFSHGPLLGFVAGWA 84
Cdd:COG0833    19 LSMIALGGVIGTGLFLASGYTISQAGPgGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTYATRFIDPAFGFAVGWN 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  85 NWLSLLTIIPIEAVAAVQYMSSW-----PWSWAnwtrgflkdgditnqglvivFLFILAFTLLNFWSVKLLTRFTSFISI 159
Cdd:COG0833    99 YWLNWAITVAAELTAAGIIMQYWfpdvpVWIWS--------------------LLFLALIFLLNALSVKAFGESEFWFSL 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 160 FKLgiptLTIIV------LMATGFQSG------NFGHNAGFMPNGSAAIFSATTAAGiiFSynaFQTTINMGN---EIEH 224
Cdd:COG0833   159 IKV----ITVIAfiivglLMIFGIIGGhapgfsNFTTGDGPFPGGFLAILGVMMIVG--FS---FQGTELIGIaagESEN 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 225 PERNI-------LWGIVIAFSISALIytllqvafIGAVpghyLAHGWQGVNfESPF---------ANLAILMNLGWLSTL 288
Cdd:COG0833   230 PEKTIpkairqvFWRILLFYILAIFV--------IAAL----IPYTDAGVA-ESPFtlvferagiPYAADIMNAVILTAV 296

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 289 LyldafvspfGTGVSFVATTSRALAAMTGTKHMPTKLGELNRKyQTPRRAMVVNMILGVV 348
Cdd:COG0833   297 L---------SAGNSGLYASTRMLWSLAKEGMAPKIFAKLNKR-GVPLNALLATMAVGLL 346
frlA PRK11357
amino acid permease;
1-440 1.06e-18

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 88.76  E-value: 1.06e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   1 MSLFSLVMLTLSAIIGSGWLFGAGMAAQIAGPA--AILSWILGAVIIGLIALNYIELGTMFPTSGGMSQYAAFSHGPLLG 78
Cdd:PRK11357   10 LGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPwlTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGSRPLA 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  79 FVAGWAN-WLSLLTIIPIEAVAAVQYMSSW-PWSwanwtrgflkdgdiTNQGLVIVFLFILAFTLLNFWSVKLLTRFTSF 156
Cdd:PRK11357   90 FLSGWASfWANDAPSLSIMALAIVSNLGFLtPID--------------PLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTL 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 157 ISIFKLgIPTLTIIVLMATGFQSGNFGhNAGFMPNGSAAIFSATTA--AGIIFSYNAFQTTINMGNEIEHPERNILWGIV 234
Cdd:PRK11357  156 ITIAKI-IPFTIVIGLGIFWFKAENFA-APTTTAIGATGSFMALLAgiSATSWSYTGMASICYMTGEIKNPGKTMPRALI 233

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 235 IAFSISALIYTLLQVAFIGAVPGHYLAhgwqgvNFESPFANLA--ILMNLGWLSTLLYLDAFVSPFGTGVSFVATTSRAL 312
Cdd:PRK11357  234 GSCLLVLVLYTLLALVISGLMPFDKLA------NSETPISDALtwIPALGSTAGIFVAITAMIVILGSLSSCVMYQPRLE 307

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 313 AAMTGTKHMPTKLGELNRKYQTPRRAMVVNMILGVVLVAGfrnwSALSNVISTSTLIAYLTGPVTVSTL--RRDAPEFSR 390
Cdd:PRK11357  308 YAMAKDNLFFKCFGHVHPKYNTPDVSIILQGALGIFFIFV----SDLTSLLGYFTLVMCFKNTLTFGSIiwCRKRDDYKP 383

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2106313143 391 PFRLWGLQLWSPLAYV----LASLAIYWAKWPTTIEVFGVIALGLICYVYYEFR 440
Cdd:PRK11357  384 LWRTPAFGLMTTLAIAssliLVASTFVWAPIPGLICAVIVIATGLPAYAFWAKR 437
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 6-373 2.66e-14

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 75.01  E-value: 2.66e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   6 LVMLTLSAIIGSGWLFGAGMAAQIAGPAAILswiLGAVIIGLIALNYI----ELGTMFP-TSGGMSQYAAFSHGPLLGFV 80
Cdd:TIGR00913   9 IQMIALGGTIGTGLLVGSGTALATGGPAGLL---IGYAIMGSIIYCVMqslgEMATFYPvVSGSFATYASRFVDPAFGFA 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  81 AGWANWLSLLTIIPIEAVAAVQYMSSWpwswanwtrgflkdGDITNQGlVIVFLFILAFTLLNFWSVKLLTRFTSFISIF 160
Cdd:TIGR00913  86 VGWNYWLQWLIVLPLELVTASMTIQYW--------------TDKVNPA-VWIAIFYVFIVIINLFGVKGYGEAEFWFSSI 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 161 K----LGIPTLTIIVLMATGFQSGNFG----HNAGFMPNGSAAIFSATTAAGIIFSYNAFQTTINMG---NEIEHPERNI 229
Cdd:TIGR00913 151 KilaiIGFIILSIILNCGGGPNHGYIGfrywHDPGAFAGGTIGGRFKGVCSVFVTAAFSFGGTELVAltaGEAANPRKSI 230

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 230 LWGIVIAFSISALIYtLLQVAFIGA-VP---GHYLAHGWQGVNFESPFAnLAIlMNLGWLSTLLYLDAFV--SPFGTGVS 303
Cdd:TIGR00913 231 PRAAKRTFWRILVFY-ILTLFLIGFlVPyndPRLLSSSSSSDSAASPFV-IAI-QNHGIKVLPHIFNAVIliSVLSAANS 307

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2106313143 304 FVATTSRALAAMTGTKHMPTKLGELNRKyQTPRRAMVVNMILGV-----VLVAGFRNWSALSNVISTSTLIAYLT 373
Cdd:TIGR00913 308 SLYASSRTLYALAHQGLAPKIFAYVDRR-GVPYVAVIVSSLFGLlaflaVSKKEAEVFTWLLNISGLSGFFTWMC 381
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 1-434 5.23e-14

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 74.40  E-value: 5.23e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   1 MSLFSLVMLTLSAIIGSGWLFGAGMAAQIAGPA--AILSWILGAVIIGLIALNYIELGTMFPTSGGMSQYAAFSHGPLLG 78
Cdd:TIGR00911  44 ITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVglALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGPLLA 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  79 FVagwANWLSLLTIIP----IEAVAAVQYMsswpwswanwTRGFLKDGDITNQGLVIV-FLFILAFTLLNFWSVKLLTRF 153
Cdd:TIGR00911 124 FL---RLWIELLVIRPgsqaVNALNFAIYI----------LTPVFPDCEVPEWAIRLVaVLCVLLLTLVNCLSVKWATRV 190

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 154 TSFISIFKLGIPTLTIIvlmaTGFQSGNFGHNAGFMPNGSAAIFSaTTAAGI-------IFSYNAFQTTINMGNEIEHPE 226
Cdd:TIGR00911 191 QDIFTACKLLALLLIII----TGWVQLGKGGVESLNPKNAFEGTE-TSAGGIvlafysgIWAYGGWNYLNFVTEEVKNPY 265

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 227 RNILWGIVIAFSISALIYTLLQVAFIGAV-PGHYLAHGWQGVNFESpfanlailMNLGWLSTLLYLDAFVSPFGTGVSFV 305
Cdd:TIGR00911 266 RTLPIAIIISMPIVTFIYVLTNIAYFTVLsPEELLASLAVAVDFGE--------RLLGVMSWAMPALVGLSCFGSVNGSL 337

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 306 ATTSRALAAMTGTKHMPTKLGELNRKYQTPRRAMVVNMILgVVLVAGFRNWSALSNVISTSTLIAYLTGPVTVSTLRRDA 385
Cdd:TIGR00911 338 FSSSRLFFVGGREGHLPSLLSMIHVKRLTPLPSLLIVCTL-TLLMLFSGDIYSLINLISFANWLFNALAVAGLLWLRYKR 416

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2106313143 386 PEFSRPFRlwgLQLWSPLAYVLASLA-IYWAKWPTTIEV---FGVIALGLICY 434
Cdd:TIGR00911 417 PEMNRPIK---VPLFFPVFFLLSCLFlIILSLYSPPVGCgvgFIIMLTGVPVY 466
2A0302 TIGR00905
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several ...
 1-372 8.39e-13

transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129983  Cd Length: 473  Bit Score: 70.47  E-value: 8.39e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   1 MSLFSLVMLTLSAIIGSGWLFGAGMAAQIAGP-AAILSWILGAVIIGLIALNYIELGTMFP-TSGGMSQYAAFSHGPLLG 78
Cdd:TIGR00905   9 LGLFALTALVIGSMIGSGIFSLPQNLASVAGPgAVIIGWIITGVGMLALAFVFAILATKKPeLDGGIYAYAREGFGPYIG 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  79 FVAGWANWLSLLTIIPIEAVAAVQYMSSWpwswanwtRGFLKDGDITNQGLVIVFLfILAFTLLNFWSVKLLTRFTSFIS 158
Cdd:TIGR00905  89 FMSGWGYWLSAWIGNVAYAVLLFSALGYF--------FPLFGSGNPVPSILGASVL-LWVFTFLVLRGVRQAAFINTITT 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 159 IFKLgIPTLTIIVLMATGFQSGNFghNAGFMPNGSAAIFSATTAAGIIFSYN--AF---QTTINMGNEIEHpERNILWGI 233
Cdd:TIGR00905 160 IAKL-IPLFLFIIIGWFWFKLDLF--TADFWGHDVPSLGSVFSQVKNTMLVTlwVFigiEGAVVSSGRAKN-KSDVGKAT 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 234 VIAFSISALIYTLLQVAFIGAVPGHYLAhgwqgvNFESPFANLAILMNLG-WLSTLLYLDAFVSPFGTGVSFVATTSRAL 312
Cdd:TIGR00905 236 VLGTLGALVIYILITLLSLGVLPQQELA------NLPNPSMAAVLEMIVGkWGAVLISLGLIISVLGSLLSWTMLAAEVP 309

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2106313143 313 AAMTGTKHMPTKLGELNRKyQTPRRAMVVNMILGVVLVAGF----RNWSALSNVISTSTLIAYL 372
Cdd:TIGR00905 310 FSAAKDGLFPKIFGRVNKN-GAPSVALLLTNILIQLFLLLTlltsSAYNVLVSLAVVMILVPYL 372
PRK10197 PRK10197
GABA permease;
8-435 1.76e-12

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 69.27  E-value: 1.76e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   8 MLTLSAIIGSGWLFGAGMAAQIAGPAAILSWILGAVIIGLIALNYIELGTMFPTSGGMSQYAAFSHGPLLGFVAGWANWL 87
Cdd:PRK10197    1 MLSIAGVIGASLFVGSSVAIAEAGPAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWW 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  88 SLLTIIPIEAVAAVQYMSSWPWSWANWtrgflkdgditnqglVIVFLFILAFTLLNFWSVKLLTRFTSFISIFKLgIPTL 167
Cdd:PRK10197   81 FWVLVIPLEANIAAMILHSWVPGIPIW---------------LFSLVITLALTGSNLLSVKNYGEFEFWLALCKV-IAIL 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 168 TIIVLMATGFQS----------GNFGHNAGFMPNGSAAIFSATTAAgiIFSYNAFQTTINMGNEIEHPERNILWG---IV 234
Cdd:PRK10197  145 AFIFLGAVAISGfypyaevsgiSRLWDSGGFMPNGFGAVLSAMLIT--MFSFMGAEIVTIAAAESDTPEKHIVRAtnsVI 222

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 235 IAFSISALIYTLLQVAFIgavpghylAHGWQGVNFESPFANLAILMNLGWLSTLLYLDAFVSPFGTGVSFVATTSRALAA 314
Cdd:PRK10197  223 WRISIFYLCSIFVVVALI--------PWNMPGLKAVGSYRSVLELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYS 294

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 315 MTGTKHMPTKLGELNRKyQTPRRAMVVNMilGVVLVAGFRNWSALSNV----ISTSTLIAYLTGPVTVST-------LRR 383
Cdd:PRK10197  295 LSRRGDAPAVMGKINRS-KTPYVAVLLST--GAAFLTVVVNYYAPAKVfkflIDSSGAIALLVYLVIAVSqlrmrkiLRA 371

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2106313143 384 DAPEFSRPFRLWGLQLWSPLAYVLASLAIYWAKWPTTIEVF--GVIALGLICYV 435
Cdd:PRK10197  372 EGSEIRLRMWLYPWLTWLVIGFITFVLVVMLFRPAQQLEVIstGLLAIGIICTV 425
PRK10249 PRK10249
phenylalanine transporter; Provisional
 8-331 3.72e-11

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 65.39  E-value: 3.72e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   8 MLTLSAIIGSGWLFGAGMAAQIAGPAAILSWILGAVIIGLIALNYIELGTMFPTSGGMSQYAAFSHGPLLGFVAGWANWL 87
Cdd:PRK10249   30 LIALGGAIGTGLFLGIGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFLSGWNYWV 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  88 SLLTIIPIEAVAAVQYMSSW-----PWSWAnwtrgflkdgditnqglVIVFLFILAFTLLNfwsVKLLTRFTSFISIFKL 162
Cdd:PRK10249  110 MFVLVGMAELTAAGIYMQYWfpdvpTWIWA-----------------AAFFIIINAVNLVN---VRLYGETEFWFALIKV 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 163 giptLTIIVLMATGFQ---SGNFGHNAGFMPNGSAAIFSAT-------TAAGIIFSYNAFQTTINMGNEIEHPERNilwg 232
Cdd:PRK10249  170 ----LAIIGMIGFGLWllfSGHGGEKASIDNLWRYGGFFATgwnglilSLAVIMFSFGGLELIGITAAEARDPEKS---- 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 233 ivIAFSISALIYTLLqVAFIGAVPGHYLAHGWQGVNFE-SPFANLAILMNLGWLSTLLYLDAFVSPFGTGVSFVATTSRA 311
Cdd:PRK10249  242 --IPKAVNQVVYRIL-LFYIGSLVVLLALYPWVEVKSNsSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRM 318

                         330       340
                  ....*....|....*....|
gi 2106313143 312 LAAMTGTKHMPTKLGELNRK 331
Cdd:PRK10249  319 LFGLSVQGNAPKFLTRVSRR 338
PRK10238 PRK10238
aromatic amino acid transporter AroP;
8-229 1.21e-08

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 57.27  E-value: 1.21e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   8 MLTLSAIIGSGWLFGAGMAAQIAGPAAILSWILGAVIIGLIALNYIELGTMFPTSGGMSQYAAFSHGPLLGFVAGWANWL 87
Cdd:PRK10238   21 LIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWV 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  88 SLLTIIPIEAVAAVQYMSSWPWSWANWtrgflkdgditnqglVIVFLFILAFTLLNFWSVKLLTRFTSFISIFKLgIPTL 167
Cdd:PRK10238  101 LYVLVAMAELTAVGKYIQFWYPEIPTW---------------VSAAVFFVVINAINLTNVKVFGEMEFWFAIIKV-IAVV 164

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2106313143 168 TIIVLMATGFQSGNFGHNA---------GFMPNGSAAIfsATTAAGIIFSYNAFQTTINMGNEIEHPERNI 229
Cdd:PRK10238  165 AMIIFGGWLLFSGNGGPQAtvsnlwdqgGFLPHGFTGL--VMMMAIIMFSFGGLELVGITAAEADNPEQSI 233
PRK10836 PRK10836
lysine transporter; Provisional
 6-247 1.21e-08

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 57.52  E-value: 1.21e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   6 LVMLTLSAIIGSGWLFGAGMAAQIAGPA-AILSWILGAVIIGLIALNYIELGTMFPTSGGMSQYAAFSHGPLLGFVAGWA 84
Cdd:PRK10836   22 LTMIAIGGSIGTGLFVASGATISQAGPGgALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALGWN 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  85 NWLSLLTIIPIEAVAAVQYMSSWPWSWANWtrgflkdgditnqglVIVFLFILAFTLLNFWSVKLLTRFTSFISIFKLGI 164
Cdd:PRK10836  102 YWYNWAVTIAVDLVAAQLVMSWWFPDTPGW---------------IWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTT 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 165 PTLTIIV--LMATGFQSGNFG---HNAGFMPNGSAAIFSATTAAGIIFSYnAFQTTINMG---NEIEHPERNI------- 229
Cdd:PRK10836  167 VIVFIIVgvLMIIGIFKGAEPagwSNWTIGDAPFAGGFAAMIGVAMIVGF-SFQGTELIGiaaGESEDPAKNIpravrqv 245

                         250
                  ....*....|....*...
gi 2106313143 230 LWGIVIAFSISALIYTLL 247
Cdd:PRK10836  246 FWRILLFYVFAILIISLI 263
proY PRK10580
putative proline-specific permease; Provisional
 9-192 5.44e-08

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 55.21  E-value: 5.44e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   9 LTLSAIIGSGWLFGAGMAAQIAGPAAILSWILGAVIIGLIALNYIELGTMFPTSGGMSQYAAFSHGPLLGFVAGWANWLS 88
Cdd:PRK10580   19 MALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFE 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  89 LLTIIPIEAVAAVQYMSSWPWSWANWtrgflkdgditnqglVIVFLFILAFTLLNFWSVKLLTRFTSFISIFKLGiptlT 168
Cdd:PRK10580   99 ILIVAIADVTAFGIYMGVWFPTVPHW---------------IWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVA----T 159

                         170       180
                  ....*....|....*....|....
gi 2106313143 169 IIVLMATGFQSGNFGHNAGFMPNG 192
Cdd:PRK10580  160 IIIMIVAGIGIIIWGIGNGGQPTG 183
PRK11387 PRK11387
S-methylmethionine permease;
1-348 2.06e-07

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 53.32  E-value: 2.06e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   1 MSLFSLVMLTLSAIIGSGWLFGAGMAAQIAGPAA-ILSWILGAVIIGLIALNYIELGTMFPTSGGMSQYAAFSHGPLLGF 79
Cdd:PRK11387   16 MKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAGtLLAYLIGALVVYLVMQCLGELSVAMPETGAFHVYAARYLGPATGY 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  80 VAGWANWLSLLTIIPIEAVAAVQYMSSW-----PWSWAnwtrgflkdgditnqglvivFLFILAFTLLNFWSVKLLTRFT 154
Cdd:PRK11387   96 TVAWLYWLTWTVALGSSLTAAGFCMQYWfpqvpVWPWC--------------------LLFCALIFGLNVVSTRFFAEGE 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 155 SFISIFKLgIPTLTIIVL----------MATGFQSGNFGH--NAGFMPNGSAAIFsaTTAAGIIFSYNAFQTTINMGNEI 222
Cdd:PRK11387  156 FWFSLIKV-VTILAFIVLggaaifgfipMQDGSPAPGLRNltAEGWFPHGGLPIL--MTMVAVNFAFSGTELIGIAAGET 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 223 EHPERNILWGIVIafSISALIYTLLQVAFIGAVpghyLAHGWQGVNFESPFANLAILMNLGWLSTLLYLDAFVSPFGTGV 302
Cdd:PRK11387  233 ENPAKVIPVAIRT--TIARLVIFFVGTVLVLAA----LIPMQQAGVEKSPFVLVFEKVGIPYAADIFNFVILTAILSAAN 306

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 2106313143 303 SFVATTSRALAAMTGTKHMPTKLGELNRKyQTPRRAMVVNMILGVV 348
Cdd:PRK11387  307 SGLYASGRMLWSLSNEGTLPACFARLTKR-GIPLTALSVSMLGGLL 351
PRK10644 PRK10644
arginine/agmatine antiporter;
14-372 2.43e-06

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 49.79  E-value: 2.43e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  14 IIGSG-WLFGAGMAAqiAGPAAILSWILGAVIIGLIALNYIELGTMFPTSGGMSQYAAFSHGPLLGF---VAGW-ANWLS 88
Cdd:PRK10644   23 IMGSGvFLLPANLAS--TGGIAIYGWLVTIIGALGLSMVYAKMSSLDPSPGGSYAYARRCFGPFLGYqtnVLYWlACWIG 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  89 LLTIipieAVAAVQYMSSWpwswanwtRGFLKDGDITNQGLVIVflfILAFTLLNFWSVKLLTRFTSFISIFKLgIPTLT 168
Cdd:PRK10644  101 NIAM----VVIGVGYLSYF--------FPILKDPLVLTITCVVV---LWIFVLLNIVGPKMITRVQAVATVLAL-IPIVG 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 169 IIVLMATGFQSGNF--GHNAGFMPNGSAAifsATTAAGIIFSYNAFQTTINMGNEIEHPERNILWGIVIAFSISALIYTL 246
Cdd:PRK10644  165 IAVFGWFWFRGETYmaAWNVSGLGTFGAI---QSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVL 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 247 LQVAFIGAVPGHYLAHGwqgvnfESPFANLAILMNLGWLSTLLYLDAFVSPFGT--GVSFVATTSRALAAMTGTkhMPTK 324
Cdd:PRK10644  242 SSTAIMGMIPNAALRVS------ASPFGDAARMALGDTAGAIVSFCAAAGCLGSlgGWTLLAGQTAKAAADDGL--FPPI 313

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2106313143 325 LGELNRKYQTPRRAMVVNMILGVVLVAGF-----RNWSALSNVISTSTLIAYL 372
Cdd:PRK10644  314 FARVNKAGTPVAGLLIVGVLMTIFQLSSIspnasKEFGLVSSVSVIFTLVPYL 366
potE PRK10655
putrescine transporter; Provisional
 1-262 5.49e-06

putrescine transporter; Provisional


Pssm-ID: 182622  Cd Length: 438  Bit Score: 48.87  E-value: 5.49e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   1 MSLFSLVMLTLSAIIGSGWLFGAGMAAQIaGPAAILSWILGAViiGLIALNYI--ELGTMFPTSGGMSQYAAFSHGPLLG 78
Cdd:PRK10655    8 MGVVQLTILTAVNMMGSGIIMLPTKLAQV-GTISILSWLVTAV--GSMALAYAfaKCGMFSRKSGGMGGYAEYAFGKSGN 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  79 FVAGWANWLSLLTIIPIEAVAAVQYMSSwpwswanwtrgfLKDGDITNQGLVIVFLFILAF-TLLNFWSVKLLTRFTSFi 157
Cdd:PRK10655   85 FMANYTYGVSLLIANVAIAISAVGYGTE------------LFGATLSPVQICLATIGVLWLcTVANFGGARITGQISSV- 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 158 SIFKLGIPTLTIIVLMATGFQSGNFGhnAGFMPNGSAaiFSATTAAGIIFSYNAF---QTTINMGNEIEHPERNILWGIV 234
Cdd:PRK10655  152 TVWGVIIPVVGLSIIGWFWFSPSLYV--AAWNPHHLP--FFSAVGSSIAMTLWAFlglESACANSDAVENPERNVPIAVL 227

                         250       260
                  ....*....|....*....|....*...
gi 2106313143 235 IAFSISALIYTLLQVAFIGAVPGHYLAH 262
Cdd:PRK10655  228 GGTLGAAVIYIVSTNVIAGIVPNMELAN 255
PRK11021 PRK11021
putative transporter; Provisional
 25-244 1.32e-05

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 47.60  E-value: 1.32e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  25 MAAQIAGPAAILSWILGAVIIGLIALNYIELGTMFPTSGGMSQYAAFSHGPLLGFVAGWAnwlsLLTIIPIEAVAAVQyM 104
Cdd:PRK11021   25 LAALVAGNNSLWAWPLLILLIFPIAIVFARLGRHFPHAGGPAHFVGMAFGPRLGRVTGWL----FLSVIPVGLPAALQ-I 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 105 SSWPW----SWANWtrgflkdgditnqGLVIVFLFILAFT-LLNFWSVKLLTRFTSFISifkLGIPTLTIIVLMATGFQS 179
Cdd:PRK11021  100 AAGFGqalfGWSSW-------------QLLLAELLTLALLwLLNLRGASSSANLQTVIA---LLIVALVVAIWWAGDIKP 163

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2106313143 180 GNFGHNAGFMPNGSaaifSATTAAGIIF-SYNAFQTTINMGNEIEHPERNILWGIVIAFSISALIY 244
Cdd:PRK11021  164 ADIPFPAPGSIEWS----GLFAALGVMFwCFVGIEAFAHLASEFKNPERDFPRALMIGLLLAGLVY 225
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
 32-243 2.68e-05

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 46.66  E-value: 2.68e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  32 PAAILSWILGAVIIGLIALNYIELGTMFPTSGGMSQYAAFSHG----PLLGFVAGWANWLSLLTIipieaVAAVQYMSSW 107
Cdd:TIGR00907  47 MSIVWGWIIAGAGSICIALSLAELSSAYPTSGGQYFWSAKLAPprqmPFASWMTGWFNLAGQVAG-----TASTDLSVAQ 121

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 108 PWSWANWTRGFLKDGDITNQGLVIVFLFILAF-TLLNFWSVKLLTRFTSFISIFKL-GIPTLTIIVLMA--TGFQSGNF- 182
Cdd:TIGR00907 122 LILGIVSLTTPGREYIPTRWHIFGIMIGIHLIhALINSLPTKWLPRITSSAAYWSLlGFLTICITLLACksPKFNDGKFv 201

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2106313143 183 -----GHNAGFMPNGSAAIFSATTAAGIIFSYNAfqtTINMGNEIEHPERNILWGIVIAFSISALI 243
Cdd:TIGR00907 202 ftnfnNSTGGWKPGGFAFLLGLLNPAWSMTGYDG---TAHMAEEIENPEVVGPRAIIGAVAIGIVT 264
PRK15049 PRK15049
L-asparagine permease;
8-362 6.03e-05

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 45.77  E-value: 6.03e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   8 MLTLSAIIGSGWLFGAGMAAQIAGPAAILSWILGAVIIGLIALNYIELGTMFPTSGGMSQYAAFSHGPLLGFVAGWANWL 87
Cdd:PRK15049   37 MIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMYFI 116

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  88 SLLTIIPIEAVAAVQYMSSWPwSWANWTRGFLKDGDITNQGlVIVFLFILAFTLLNFWS--VKLLTrFTSFISIFKLGIP 165
Cdd:PRK15049  117 NWAMTGIVDITAVALYMHYWG-AFGGVPQWVFALAALTIVG-TMNMIGVKWFAEMEFWFalIKVLA-IVTFLVVGTVFLG 193

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 166 TLTIIVLMATGFQSgnFGHNAGFMPNGsaAIFSATTAAGIIFSYNAFQTTINMGNEIEHPErnilwgIVIAFSISALIYT 245
Cdd:PRK15049  194 SGQPLDGNTTGFHL--ITDNGGFFPHG--LLPALVLIQGVVFAFASIEMVGTAAGECKDPQ------TMVPKAINSVIWR 263

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 246 lLQVAFIGAVPGHYLAHGWQGVNF-ESPFANLAILMNLGWLSTLLYLDAFVSPFGTGVSFVATTSRALAAMTGTKHMPTK 324
Cdd:PRK15049  264 -IGLFYVGSVVLLVMLLPWSAYQAgQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSAPSF 342

                         330       340       350
                  ....*....|....*....|....*....|....*...
gi 2106313143 325 LGELNRKyQTPRRAMVVNmiLGVVLVAGFRNWSALSNV 362
Cdd:PRK15049  343 MAKMSRQ-HVPYAGILAT--LVVYVVGVFLNYLVPSRV 377
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
 15-350 2.20e-04

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 43.95  E-value: 2.20e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  15 IGSGWLFGAGMAAQIAGPAAILSW-ILGAVIIGLI-ALNYIELGTMFPTSggMSQYAAFSHGPLLGFVAGWANWLSLLTI 92
Cdd:PRK11049   36 IGTGLFMGSGKTISLAGPSIIFVYmIIGFMLFFVMrAMGELLLSNLEYKS--FSDFASDLLGPWAGYFTGWTYWFCWVVT 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  93 IPIEAVAAVQYMSSWPWSWANWTRGFLKDGDITNQGLVIVFLfilaFTLLNFWsvklltrfTSFISIFKLGIPTLTIIVL 172
Cdd:PRK11049  114 GIADVVAITAYAQFWFPDLSDWVASLAVVLLLLSLNLATVKM----FGEMEFW--------FAMIKIVAIVALIVVGLVM 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 173 MATGFQS--------GNFGHNAGFMPNGSAAIFSATTAAgiIFSYNAFQTTINMGNEIEHPERNILWGI------VIAFS 238
Cdd:PRK11049  182 VAMHFQSptgveasfAHLWNDGGMFPKGLSGFFAGFQIA--VFAFVGIELVGTTAAETKDPEKSLPRAInsipirIIMFY 259

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 239 ISALIYTLLQVAFIGAVPGhylahgwqgvnfESPFANLAILMNLGWLSTLLYLDAFVSPFGTGVSFVATTSRALAAMTGT 318
Cdd:PRK11049  260 VFALIVIMSVTPWSSVVPD------------KSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQE 327

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 2106313143 319 KHMPTKLGELNRKyQTPRRAMVVN---MILGVVLV 350
Cdd:PRK11049  328 GVAPKAFAKLSKR-AVPAKGLTFScicLLGGVVLL 361
PRK15238 PRK15238
inner membrane transporter YjeM; Provisional
 1-351 3.88e-03

inner membrane transporter YjeM; Provisional


Pssm-ID: 237929 [Multi-domain]  Cd Length: 496  Bit Score: 39.92  E-value: 3.88e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143   1 MSLFSLVMLTLSAIIGSGwlfGAGMAAQIAGPAAILSWILGAVIIGL-IALNYIELGTMFP-TSGGMSQYAAFSHGPLLG 78
Cdd:PRK15238    9 LSLIGLILMIFTSVFGFA---NSPRAFYLMGYSAIPWYILSAILFFIpFALMMAEYGSAFKdEKGGIYSWMNKSVGPKFA 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143  79 FV------AGWANWL---SLLTIIPIEAVAAVQYMSSwpwswaNWTRGFLKdgdiTNQGL-VIVFLFILAFTLLNFWSVK 148
Cdd:PRK15238   86 FIgtfmwfASYIIWMvstASKIWIPFSTFIFGKDTTQ------TWHFLGLN----STQVVgILAVIWMILVTFVASKGIN 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 149 LLTRFTSFISIFKLGIPTL----TIIVLMATGFQSGNFGHNAGFM--PN----GSAAIFSATTAAgiIFSYNAFQTTINM 218
Cdd:PRK15238  156 KIAKVTSIGGIAVMLLNIVlllvSIIILILNGGHFAQPIGVSSFVtsPNpayqSPIAVLSFVVFA--IFAYGGIEAVGGL 233

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2106313143 219 GNEIEHPERNILWGIVIAFSISALIYTLLqVAFIGavpghyLAHGWQGVnFESPFANLA----ILMN---------LGW- 284
Cdd:PRK15238  234 VDKTENPEKNFPKGIIIAAIVISIGYSLA-IFLWG------VSTNWQQV-LSNKSVNLGnityVLMNnlgytlghaLGLs 305

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2106313143 285 LSTLLYLDAFVSPF--------GTGVSFVATTSRALAAMTGT--KHMPTKLGELNrKYQTPRRAMVVNMILGVVLVA 351
Cdd:PRK15238  306 PAASLTLGVWFARItglsmflaYTGAFFTLSYSPLKQLIEGTpkALWPKKMTKLN-KNGMPANAMWLQCIIVSVFIL 381
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH