|
Name |
Accession |
Description |
Interval |
E-value |
| DAP2 |
COG1506 |
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism]; |
415-665 |
1.38e-53 |
|
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
:
Pssm-ID: 441115 [Multi-domain] Cd Length: 234 Bit Score: 184.06 E-value: 1.38e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 415 WKSKDGLTISGLLTYPEnynKSKKYPLIIELHGGPadvfQNRFIGRRSVFpiATFSKEGYFYLRPNVRGssaYGvyfkeL 494
Cdd:COG1506 2 FKSADGTTLPGWLYLPA---DGKKYPVVVYVHGGP----GSRDDSFLPLA--QALASRGYAVLAPDYRG---YG-----E 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 495 NHGDWGGKDYQDIMDGIQYLNDKNIIDSKKISIIGWSYGGYLTAQAITHSP-LFKAAIIGGGITDLASYsvTNDLPNYLK 573
Cdd:COG1506 65 SAGDWGGDEVDDVLAAIDYLAARPYVDPDRIGIYGHSYGGYMALLAAARHPdRFKAAVALAGVSDLRSY--YGTTREYTE 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 574 LNLGGYlWDKPKFYQKRSPIYAANHVTTPTLLMYGENDIRVPLSQGVEFFNILKLRNIPSMMLIYPKQYHSLSDPnYIID 653
Cdd:COG1506 143 RLMGGP-WEDPEAYAARSPLAYADKLKTPLLLIHGEADDRVPPEQAERLYEALKKAGKPVELLVYPGEGHGFSGA-GAPD 220
|
250
....*....|..
gi 2156585585 654 AGIRNVSWINKY 665
Cdd:COG1506 221 YLERILDFLDRH 232
|
|
| COG4946 super family |
cl27624 |
Uncharacterized N-terminal domain of tricorn protease, contains WD40 repeats [Function unknown] ... |
87-276 |
2.82e-09 |
|
Uncharacterized N-terminal domain of tricorn protease, contains WD40 repeats [Function unknown];
The actual alignment was detected with superfamily member COG4946:
Pssm-ID: 443973 [Multi-domain] Cd Length: 1072 Bit Score: 60.44 E-value: 2.82e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 87 PKWSPNGHYLAFlskkVSEKSNDNALSLIKIWSKKTNKIylLTETKNNIKT-LSWSRNGNFIAYVTenkkdfyiDKNKLK 165
Cdd:COG4946 348 PAWSPDGKSIAY----FSDASGEYELYIAPADGSGEPKQ--LTLGDLGRVFnPVWSPDGKKIAFTD--------NRGRLW 413
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 166 IFsssvrndemhiieidykNLKKNKDKIIIskyiQGNKFSYIGNLSWSKDDKDIAFSHDigDRNDLWNLGIIstiNLMTN 245
Cdd:COG4946 414 VV-----------------DLASGKVRKVD----TDGYGDGISDLAWSPDSKWLAYSKP--GPNQLSQIFLY---DVETG 467
|
170 180 190
....*....|....*....|....*....|.
gi 2156585585 246 KinTINIFKQRMIMQQPHYSPDGQYLLFTAS 276
Cdd:COG4946 468 K--TVQLTDGRYDDGSPAFSPDGKYLYFLSS 496
|
|
| TolB super family |
cl43285 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
219-338 |
2.41e-04 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
The actual alignment was detected with superfamily member COG0823:
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 41.97 E-value: 2.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 219 IAFSHDIGDRNDLWnlgiisTINLMTNKINTINifKQRMIMQQPHYSPDGQYLLFTASpeqvWSPRFCIYMQKIITKSVT 298
Cdd:COG0823 1 LAFTLSRDGNSDIY------VVDLDGGEPRRLT--NSPGIDTSPAWSPDGRRIAFTSD----RGGGPQIYVVDADGGEPR 68
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 2156585585 299 KL--ACSFDQDPKlvgWSKSGKNIIFTENFHTWRNIYSLSTD 338
Cdd:COG0823 69 RLtfGGGYNASPS---WSPDGKRLAFVSRSDGRFDIYVLDLD 107
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| DAP2 |
COG1506 |
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism]; |
415-665 |
1.38e-53 |
|
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
Pssm-ID: 441115 [Multi-domain] Cd Length: 234 Bit Score: 184.06 E-value: 1.38e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 415 WKSKDGLTISGLLTYPEnynKSKKYPLIIELHGGPadvfQNRFIGRRSVFpiATFSKEGYFYLRPNVRGssaYGvyfkeL 494
Cdd:COG1506 2 FKSADGTTLPGWLYLPA---DGKKYPVVVYVHGGP----GSRDDSFLPLA--QALASRGYAVLAPDYRG---YG-----E 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 495 NHGDWGGKDYQDIMDGIQYLNDKNIIDSKKISIIGWSYGGYLTAQAITHSP-LFKAAIIGGGITDLASYsvTNDLPNYLK 573
Cdd:COG1506 65 SAGDWGGDEVDDVLAAIDYLAARPYVDPDRIGIYGHSYGGYMALLAAARHPdRFKAAVALAGVSDLRSY--YGTTREYTE 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 574 LNLGGYlWDKPKFYQKRSPIYAANHVTTPTLLMYGENDIRVPLSQGVEFFNILKLRNIPSMMLIYPKQYHSLSDPnYIID 653
Cdd:COG1506 143 RLMGGP-WEDPEAYAARSPLAYADKLKTPLLLIHGEADDRVPPEQAERLYEALKKAGKPVELLVYPGEGHGFSGA-GAPD 220
|
250
....*....|..
gi 2156585585 654 AGIRNVSWINKY 665
Cdd:COG1506 221 YLERILDFLDRH 232
|
|
| Peptidase_S9 |
pfam00326 |
Prolyl oligopeptidase family; |
466-665 |
1.23e-39 |
|
Prolyl oligopeptidase family;
Pssm-ID: 459761 [Multi-domain] Cd Length: 213 Bit Score: 145.06 E-value: 1.23e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 466 IATFSKEGYFYLRPNVRGSSAYGVYFKELNHGDWGGKDYQDIMDGIQYLNDKNIIDSKKISIIGWSYGGYLTAQAIT-HS 544
Cdd:pfam00326 7 AQLLADRGYVVAIANGRGSGGYGEAFHDAGKGDLGQNEFDDFIAAAEYLIEQGYTDPDRLAIWGGSYGGYLTGAALNqRP 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 545 PLFKAAIIGGGITDLASYSVTNDLPnyLKLNLGGYL--WDKPKFYQKRSPI--YAANHVTTPTLLMYGENDIRVPLSQGV 620
Cdd:pfam00326 87 DLFKAAVAHVPVVDWLAYMSDTSLP--FTERYMEWGnpWDNEEGYDYLSPYspADNVKVYPPLLLIHGLLDDRVPPWQSL 164
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 2156585585 621 EFFNILKLRNIPSMMLIYPKQYHSLSDPNYIIDAGIRNVSWINKY 665
Cdd:pfam00326 165 KLVAALQRKGVPFLLLIFPDEGHGIGKPRNKVEEYARELAFLLEY 209
|
|
| COG4946 |
COG4946 |
Uncharacterized N-terminal domain of tricorn protease, contains WD40 repeats [Function unknown] ... |
87-276 |
2.82e-09 |
|
Uncharacterized N-terminal domain of tricorn protease, contains WD40 repeats [Function unknown];
Pssm-ID: 443973 [Multi-domain] Cd Length: 1072 Bit Score: 60.44 E-value: 2.82e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 87 PKWSPNGHYLAFlskkVSEKSNDNALSLIKIWSKKTNKIylLTETKNNIKT-LSWSRNGNFIAYVTenkkdfyiDKNKLK 165
Cdd:COG4946 348 PAWSPDGKSIAY----FSDASGEYELYIAPADGSGEPKQ--LTLGDLGRVFnPVWSPDGKKIAFTD--------NRGRLW 413
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 166 IFsssvrndemhiieidykNLKKNKDKIIIskyiQGNKFSYIGNLSWSKDDKDIAFSHDigDRNDLWNLGIIstiNLMTN 245
Cdd:COG4946 414 VV-----------------DLASGKVRKVD----TDGYGDGISDLAWSPDSKWLAYSKP--GPNQLSQIFLY---DVETG 467
|
170 180 190
....*....|....*....|....*....|.
gi 2156585585 246 KinTINIFKQRMIMQQPHYSPDGQYLLFTAS 276
Cdd:COG4946 468 K--TVQLTDGRYDDGSPAFSPDGKYLYFLSS 496
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
219-338 |
2.41e-04 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 41.97 E-value: 2.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 219 IAFSHDIGDRNDLWnlgiisTINLMTNKINTINifKQRMIMQQPHYSPDGQYLLFTASpeqvWSPRFCIYMQKIITKSVT 298
Cdd:COG0823 1 LAFTLSRDGNSDIY------VVDLDGGEPRRLT--NSPGIDTSPAWSPDGRRIAFTSD----RGGGPQIYVVDADGGEPR 68
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 2156585585 299 KL--ACSFDQDPKlvgWSKSGKNIIFTENFHTWRNIYSLSTD 338
Cdd:COG0823 69 RLtfGGGYNASPS---WSPDGKRLAFVSRSDGRFDIYVLDLD 107
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| DAP2 |
COG1506 |
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism]; |
415-665 |
1.38e-53 |
|
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
Pssm-ID: 441115 [Multi-domain] Cd Length: 234 Bit Score: 184.06 E-value: 1.38e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 415 WKSKDGLTISGLLTYPEnynKSKKYPLIIELHGGPadvfQNRFIGRRSVFpiATFSKEGYFYLRPNVRGssaYGvyfkeL 494
Cdd:COG1506 2 FKSADGTTLPGWLYLPA---DGKKYPVVVYVHGGP----GSRDDSFLPLA--QALASRGYAVLAPDYRG---YG-----E 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 495 NHGDWGGKDYQDIMDGIQYLNDKNIIDSKKISIIGWSYGGYLTAQAITHSP-LFKAAIIGGGITDLASYsvTNDLPNYLK 573
Cdd:COG1506 65 SAGDWGGDEVDDVLAAIDYLAARPYVDPDRIGIYGHSYGGYMALLAAARHPdRFKAAVALAGVSDLRSY--YGTTREYTE 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 574 LNLGGYlWDKPKFYQKRSPIYAANHVTTPTLLMYGENDIRVPLSQGVEFFNILKLRNIPSMMLIYPKQYHSLSDPnYIID 653
Cdd:COG1506 143 RLMGGP-WEDPEAYAARSPLAYADKLKTPLLLIHGEADDRVPPEQAERLYEALKKAGKPVELLVYPGEGHGFSGA-GAPD 220
|
250
....*....|..
gi 2156585585 654 AGIRNVSWINKY 665
Cdd:COG1506 221 YLERILDFLDRH 232
|
|
| Peptidase_S9 |
pfam00326 |
Prolyl oligopeptidase family; |
466-665 |
1.23e-39 |
|
Prolyl oligopeptidase family;
Pssm-ID: 459761 [Multi-domain] Cd Length: 213 Bit Score: 145.06 E-value: 1.23e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 466 IATFSKEGYFYLRPNVRGSSAYGVYFKELNHGDWGGKDYQDIMDGIQYLNDKNIIDSKKISIIGWSYGGYLTAQAIT-HS 544
Cdd:pfam00326 7 AQLLADRGYVVAIANGRGSGGYGEAFHDAGKGDLGQNEFDDFIAAAEYLIEQGYTDPDRLAIWGGSYGGYLTGAALNqRP 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 545 PLFKAAIIGGGITDLASYSVTNDLPnyLKLNLGGYL--WDKPKFYQKRSPI--YAANHVTTPTLLMYGENDIRVPLSQGV 620
Cdd:pfam00326 87 DLFKAAVAHVPVVDWLAYMSDTSLP--FTERYMEWGnpWDNEEGYDYLSPYspADNVKVYPPLLLIHGLLDDRVPPWQSL 164
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 2156585585 621 EFFNILKLRNIPSMMLIYPKQYHSLSDPNYIIDAGIRNVSWINKY 665
Cdd:pfam00326 165 KLVAALQRKGVPFLLLIFPDEGHGIGKPRNKVEEYARELAFLLEY 209
|
|
| DLH |
COG0412 |
Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism]; |
409-648 |
9.05e-12 |
|
Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440181 [Multi-domain] Cd Length: 226 Bit Score: 65.37 E-value: 9.05e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 409 KTEKINWKSKDGLTISGLLTYPENynkSKKYPLIIELHG--GPADvfQNRFIGRRsvfpiatFSKEGYFYLRPNVRGSSA 486
Cdd:COG0412 2 TTETVTIPTPDGVTLPGYLARPAG---GGPRPGVVVLHEifGLNP--HIRDVARR-------LAAAGYVVLAPDLYGRGG 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 487 YGVYFKELNHgDWGGKDY----QDIMDGIQYLNDKNIIDSKKISIIGWSYGGYLTAQAITHSPLFKAAII--GGGITDla 560
Cdd:COG0412 70 PGDDPDEARA-LMGALDPellaADLRAALDWLKAQPEVDAGRVGVVGFCFGGGLALLAAARGPDLAAAVSfyGGLPAD-- 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 561 sysvtndlpnylklnlggylwdkpkfyqkrSPIYAANHVTTPTLLMYGENDIRVPLSQGVEFFNILKLRNIPSMMLIYPK 640
Cdd:COG0412 147 ------------------------------DLLDLAARIKAPVLLLYGEKDPLVPPEQVAALEAALAAAGVDVELHVYPG 196
|
....*...
gi 2156585585 641 QYHSLSDP 648
Cdd:COG0412 197 AGHGFTNP 204
|
|
| COG4946 |
COG4946 |
Uncharacterized N-terminal domain of tricorn protease, contains WD40 repeats [Function unknown] ... |
87-276 |
2.82e-09 |
|
Uncharacterized N-terminal domain of tricorn protease, contains WD40 repeats [Function unknown];
Pssm-ID: 443973 [Multi-domain] Cd Length: 1072 Bit Score: 60.44 E-value: 2.82e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 87 PKWSPNGHYLAFlskkVSEKSNDNALSLIKIWSKKTNKIylLTETKNNIKT-LSWSRNGNFIAYVTenkkdfyiDKNKLK 165
Cdd:COG4946 348 PAWSPDGKSIAY----FSDASGEYELYIAPADGSGEPKQ--LTLGDLGRVFnPVWSPDGKKIAFTD--------NRGRLW 413
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 166 IFsssvrndemhiieidykNLKKNKDKIIIskyiQGNKFSYIGNLSWSKDDKDIAFSHDigDRNDLWNLGIIstiNLMTN 245
Cdd:COG4946 414 VV-----------------DLASGKVRKVD----TDGYGDGISDLAWSPDSKWLAYSKP--GPNQLSQIFLY---DVETG 467
|
170 180 190
....*....|....*....|....*....|.
gi 2156585585 246 KinTINIFKQRMIMQQPHYSPDGQYLLFTAS 276
Cdd:COG4946 468 K--TVQLTDGRYDDGSPAFSPDGKYLYFLSS 496
|
|
| FrsA |
COG1073 |
Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; ... |
411-624 |
7.84e-09 |
|
Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms];
Pssm-ID: 440691 [Multi-domain] Cd Length: 253 Bit Score: 56.85 E-value: 7.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 411 EKINWKSKDGLTISGLLTYPENynKSKKYPLIIELHGGPADVFQNRFIGRRsvfpiatFSKEGYFYLRPNVRGssaygvy 490
Cdd:COG1073 11 EDVTFKSRDGIKLAGDLYLPAG--ASKKYPAVVVAHGNGGVKEQRALYAQR-------LAELGFNVLAFDYRG------- 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 491 fkelnHGDWGGK-------DYQDIMDGIQYLNDKNIIDSKKISIIGWSYGGYLTAQAITHSPLFKAAIIGGGITDLAS-- 561
Cdd:COG1073 75 -----YGESEGEpreegspERRDARAAVDYLRTLPGVDPERIGLLGISLGGGYALNAAATDPRVKAVILDSPFTSLEDla 149
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2156585585 562 -----------YSVTNDLPNYLKLNLGGYLWDkpkfyqkrsPIYAANHVTTPTLLMYGENDIRVPLSQGVEFFN 624
Cdd:COG1073 150 aqrakeargayLPGVPYLPNVRLASLLNDEFD---------PLAKIEKISRPLLFIHGEKDEAVPFYMSEDLYE 214
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
211-338 |
2.00e-08 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 53.91 E-value: 2.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 211 SWSKDDKDIAFSHDIGDRNDLWnlgiisTINLMTNKINTINIFKQRmiMQQPHYSPDGQYLLFTASPEQVWSprfcIYMQ 290
Cdd:COG0823 37 AWSPDGRRIAFTSDRGGGPQIY------VVDADGGEPRRLTFGGGY--NASPSWSPDGKRLAFVSRSDGRFD----IYVL 104
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 2156585585 291 KIITKSVTKLAcSFDQDPKlvgWSKSGKNIIFTENFHTWRNIYSLSTD 338
Cdd:COG0823 105 DLDGGAPRRLT-DGPGSPS---WSPDGRRIVFSSDRGGRPDLYVVDLD 148
|
|
| COG4099 |
COG4099 |
Predicted peptidase [General function prediction only]; |
415-668 |
6.37e-07 |
|
Predicted peptidase [General function prediction only];
Pssm-ID: 443275 [Multi-domain] Cd Length: 235 Bit Score: 51.12 E-value: 6.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 415 WKSKDGLTISGLLTYPENYNKSKKYPLIIELHGG------PADVFQN---RFIGRrsvfpiATFSKEGYFYLRPNVRGSS 485
Cdd:COG4099 25 TDPSDGDTLPYRLYLPKGYDPGKKYPLVLFLHGAgergtdNEKQLTHgapKFINP------ENQAKFPAIVLAPQCPEDD 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 486 AYGvyfkelnhgdwGGKDYQDIMDGIQYLNDKNIIDSKKISIIGWSYGGYLTAQAITHSP-LFKAAIIGGGITDlasysv 564
Cdd:COG4099 99 YWS-----------DTKALDAVLALLDDLIAEYRIDPDRIYLTGLSMGGYGTWDLAARYPdLFAAAVPICGGGD------ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 565 tndlpnylklnlggylwdkpkfyqkrsPIYAANHVTTPTLLMYGENDIRVPLSQGVEFFNILKLRNIPSMMLIYPKQYHS 644
Cdd:COG4099 162 ---------------------------PANAANLKKVPVWIFHGAKDDVVPVEESRAMVEALKAAGADVKYTEYPGVGHN 214
|
250 260
....*....|....*....|....
gi 2156585585 645 LSDPNYIIDAGIRnvsWINKYSRA 668
Cdd:COG4099 215 SWDPAYANPDLYD---WLFAQKRP 235
|
|
| BD-FAE |
pfam20434 |
BD-FAE; This family represents a novel bifunctional feruloyl and acetyl xylan esterase (BD-FAE, ... |
529-626 |
4.59e-06 |
|
BD-FAE; This family represents a novel bifunctional feruloyl and acetyl xylan esterase (BD-FAE, previously known as bifunctional carbohydrate esterase (CE)), which is active on complex natural xylans and was identified as the basis of a monophyletic clade gathering all homologs identified in PULs (polysaccharide utilization loci) predicted to act on xylan. It adopts an alpha-beta-hydrolase fold with the catalytic triad Ser-Asp-His. This new family of proteins is a new candidate for biomass processing due to its capacity to remove ferulic acid and acetic acid from natural corn and birchwood xylan substrates.
Pssm-ID: 466583 [Multi-domain] Cd Length: 215 Bit Score: 47.95 E-value: 4.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 529 GWSYGGYLTAQAIT------------------HSPLFK-AAIIGG-GITDL---ASYSVTNDLPNYLKLNLGGYLWDKPK 585
Cdd:pfam20434 95 GFSAGGHLALLAGLsnnnkefegnvgdytpesSKESFKvNAVVDFyGPTDLldmDSCGTHNDAKSPETLLLGAPPLENPD 174
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 2156585585 586 FYQKRSPIYAANHVTTPTLLMYGENDIRVPLSQGVEFFNIL 626
Cdd:pfam20434 175 LAKSASPITYVDKNDPPFLIIHGDKDPLVPYCQSVLLHEKL 215
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
43-232 |
6.28e-06 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 46.59 E-value: 6.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 43 LAYVVDfyKKDNKNIWtekssikILSLTTKETHKVDYKDEDSWMPKWSPNGHYLAFLskkvsekSNDNALSLIKIWSKKT 122
Cdd:COG0823 1 LAFTLS--RDGNSDIY-------VVDLDGGEPRRLTNSPGIDTSPAWSPDGRRIAFT-------SDRGGGPQIYVVDADG 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 123 NKIYLLTETKNNIKTLSWSRNGNFIAYVTENKKDFYIdknklkifsssvrndemHIIEIDyknlkkNKDKIIISKyiqgn 202
Cdd:COG0823 65 GEPRRLTFGGGYNASPSWSPDGKRLAFVSRSDGRFDI-----------------YVLDLD------GGAPRRLTD----- 116
|
170 180 190
....*....|....*....|....*....|
gi 2156585585 203 kfsYIGNLSWSKDDKDIAFSHDIGDRNDLW 232
Cdd:COG0823 117 ---GPGSPSWSPDGRRIVFSSDRGGRPDLY 143
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
42-159 |
1.55e-05 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 45.43 E-value: 1.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 42 TLAYVVDfyKKDNKNIWtekssikILSLTTKETHKVDYKDEDSWMPKWSPNGHYLAFLskkvsekSNDNALSLIKIWSKK 121
Cdd:COG0823 44 RIAFTSD--RGGGPQIY-------VVDADGGEPRRLTFGGGYNASPSWSPDGKRLAFV-------SRSDGRFDIYVLDLD 107
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 2156585585 122 TNKIYLLTETKNNiktLSWSRNGNFIAYVTE--NKKDFYI 159
Cdd:COG0823 108 GGAPRRLTDGPGS---PSWSPDGRRIVFSSDrgGRPDLYV 144
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
115-276 |
3.35e-05 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 44.66 E-value: 3.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 115 IKIWSKKTNKIYLLTETKNNIKTLSWSRNGNFIAYVTENKKDFYIdknklkifsssvrndemHIIEIDYKNLKKnkdkii 194
Cdd:COG0823 13 IYVVDLDGGEPRRLTNSPGIDTSPAWSPDGRRIAFTSDRGGGPQI-----------------YVVDADGGEPRR------ 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 195 ISkyiqgNKFSYIGNLSWSKDDKDIAFSHDIGDRNDLWnlgiisTINLMTNKINTINIFKqrmimQQPHYSPDGQYLLFT 274
Cdd:COG0823 70 LT-----FGGGYNASPSWSPDGKRLAFVSRSDGRFDIY------VLDLDGGAPRRLTDGP-----GSPSWSPDGRRIVFS 133
|
..
gi 2156585585 275 AS 276
Cdd:COG0823 134 SD 135
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
219-338 |
2.41e-04 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 41.97 E-value: 2.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2156585585 219 IAFSHDIGDRNDLWnlgiisTINLMTNKINTINifKQRMIMQQPHYSPDGQYLLFTASpeqvWSPRFCIYMQKIITKSVT 298
Cdd:COG0823 1 LAFTLSRDGNSDIY------VVDLDGGEPRRLT--NSPGIDTSPAWSPDGRRIAFTSD----RGGGPQIYVVDADGGEPR 68
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 2156585585 299 KL--ACSFDQDPKlvgWSKSGKNIIFTENFHTWRNIYSLSTD 338
Cdd:COG0823 69 RLtfGGGYNASPS---WSPDGKRLAFVSRSDGRFDIYVLDLD 107
|
|
| COG4946 |
COG4946 |
Uncharacterized N-terminal domain of tricorn protease, contains WD40 repeats [Function unknown] ... |
62-129 |
5.21e-04 |
|
Uncharacterized N-terminal domain of tricorn protease, contains WD40 repeats [Function unknown];
Pssm-ID: 443973 [Multi-domain] Cd Length: 1072 Bit Score: 43.49 E-value: 5.21e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2156585585 62 SSIKILSLTTKETHKVDYKDEDSWMPKWSPNGHYLAFLSKKVSEKSNDNA-LSLIkiwSKKTNKIYLLT 129
Cdd:COG4946 457 SQIFLYDVETGKTVQLTDGRYDDGSPAFSPDGKYLYFLSSRDFNPTYGDLdFDLA---FPRTTRIYAVP 522
|
|
| |
