|
Name |
Accession |
Description |
Interval |
E-value |
| Amino_oxidase |
pfam01593 |
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ... |
224-707 |
7.14e-106 |
|
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.
Pssm-ID: 396255 [Multi-domain] Cd Length: 446 Bit Score: 330.61 E-value: 7.14e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 224 ISGLVVASELLHAAvDDVTIYEASDRVGGKLWSHAFKDapsVVAEMGAMRFPPAASCLFFFLERYGLSSMRPFPNPGTVD 303
Cdd:pfam01593 1 LAGLAAARELLRAG-HDVTVLEARDRVGGRIRTVRDDG---FLIELGAMWFHGAQPPLLALLKELGLEDRLVLPDPAPFY 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 304 TNLVYQGLRYmwkagqqpPKLFHRVYSGWRAFLKDGFhegdivlasPVAITQALKSGDIRRAHDSWqtwlNRFGRESFSS 383
Cdd:pfam01593 77 TVLFAGGRRY--------PGDFRRVPAGWEGLLEFGR---------LLSIPEKLRLGLAALASDAL----DEFDLDDFSL 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 384 AIERIFLGTHPPGG-ETWSFPHDWDLFKLMGIGSGGFG---PVFESGFIEILRLVINGYEENQRMCSEGISELPRRIATQ 459
Cdd:pfam01593 136 AESLLFLGRRGPGDvEVWDRLIDPELFAALPFASGAFAgdpSELSAGLALPLLWALLGEGGSLLLPRGGLGALPDALAAQ 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 460 VVnGVSVSQRIRhvqVRAIEKEKTKIKIRLKSGISELYDKVVVTSGLANIQlRHCLTCDTTifrAPVNQAVDNSHMTGSS 539
Cdd:pfam01593 216 LL-GGDVRLNTR---VRSIDREGDGVTVTLTDGEVIEADAVIVTVPLGVLK-RILFTPPLP---PEKARAIRNLGYGPVN 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 540 KLFLLTERKFWLDHIL--PSCVLMDGIAKAVYCLDYEPQDPNGKGLVLISYTWEDDSHKLLAVPDKKERFCLLRDAISRS 617
Cdd:pfam01593 288 KVHLEFDRKFWPDLGLlgLLSELLTGLGTAFSWLTFPNRAPPGKGLLLLVYVGPGDRARELEGLSDEELLQAVLRDLRKL 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 618 FPEfaqhlvpaCADYDQNVVQHDWLTDENAGGAFKLNRRGedfySEELFFQALDMTNDTGVYLAGCSCS--FTGGwVEGA 695
Cdd:pfam01593 368 FGE--------EAPEPLRVLVSDWHTDPWPRGSYSLPQYG----PGHDDYRPLARTPDPGLFFAGEHTStgYPGT-VEGA 434
|
490
....*....|..
gi 2222769220 696 IQTACNAVCAII 707
Cdd:pfam01593 435 IESGRRAARAVL 446
|
|
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
213-712 |
7.22e-68 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 230.19 E-value: 7.22e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 213 PKPKVAIIGAGISGLVVASELLHAAVDdVTIYEASDRVGGKLWSHAFkDAPSVVAEMGAMRFPPAASCLFFFLERYGLsS 292
Cdd:COG1231 6 RGKDVVIVGAGLAGLAAARELRKAGLD-VTVLEARDRVGGRVWTLRF-GDDGLYAELGAMRIPPSHTNLLALARELGL-P 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 293 MRPFPNpGTVDTNLVYQGLRYMWKAGQqppKLFHRVYSGWRAFLKdgfhegdivlaspvaitqalksgDIRRAHDSWQTW 372
Cdd:COG1231 83 LEPFPN-ENGNALLYLGGKRVRAGEIA---ADLRGVAELLAKLLR-----------------------ALAAALDPWAHP 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 373 LNRFGRESFSSAIERiflgthppggeTWSFPHDWDLFKLMGIGSGGfGPVFESGFIEILRLV-INGYEENQRMCSEGISE 451
Cdd:COG1231 136 AAELDRESLAEWLRR-----------NGASPSARRLLGLLGAGEYG-ADPDELSLLDLLRYAaSAGGGAQQFRIVGGMDQ 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 452 LPRRIATQVVNGVSVSQRirhvqVRAIEKEKTKIKIRLKSGISELYDKVVVT---SGLANIQLrhcltcdTTIFRAPVNQ 528
Cdd:COG1231 204 LPRALAAELGDRIRLGAP-----VTRIRQDGDGVTVTTDDGGTVRADAVIVTvppSVLRRIEF-------DPPLPAAKRA 271
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 529 AVDNSHMTGSSKLFLLTERKFWL-DHILPSCVLMDGIAKAVYCLDYEPQDPNGkglVLISYTWEDDSHKLLAVPDkKERF 607
Cdd:COG1231 272 AIQRLPYGAAIKVFLQFDRPFWEeDGLYGGISLTDLPIRQTWYPSNGPDGGAG---VLLGYVGGDDARALAALSP-EERV 347
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 608 CLLRDAISRSFPEFAQHLVpacadydqNVVQHDWLTDENAGGAFKLNRRGEDFYseelFFQALdMTNDTGVYLAGCSCSF 687
Cdd:COG1231 348 AAALEQLARIFGVYAAEPV--------DYVSTDWGRDPWSRGAYAAAPPGQLTA----AGPAL-AEPDGRIHFAGEHTSD 414
|
490 500
....*....|....*....|....*.
gi 2222769220 688 TG-GWVEGAIQTACNAVCAIIHNCGG 712
Cdd:COG1231 415 EWpGWVEGALESGERAAAEILARLGG 440
|
|
| RolB_RolC |
pfam02027 |
RolB/RolC glucosidase family; This family of proteins includes RolB and RolC. RolC releases ... |
1-173 |
4.69e-44 |
|
RolB/RolC glucosidase family; This family of proteins includes RolB and RolC. RolC releases cytokinins from glucoside conjugates. Whereas RolB hydrolyses indole glucosides.
Pssm-ID: 366884 Cd Length: 184 Bit Score: 156.83 E-value: 4.69e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 1 MVDKADELDRRVSDAFSEREASRGRRITQISGECSAGLACKR-LADGRFPEISAGEKVAALSA--YIYVGKEILGRILES 77
Cdd:pfam02027 13 NITDREELKLRLEQARSDYRAFVERDLLFAQRSWVARFLRKPcLDGPRLPGIFDGDTILLDDSplYVYCSREILRQCAES 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 78 EPWARARVSGLVAIDLAPFCMDFSEAQLLQTLFLLS-GKRCASSDLSHFVAISISKTARSRTLQmppyekGTTKRVTGFT 156
Cdd:pfam02027 93 RPLSSSSPSGLVATTLPPYREDITREQMRQLLNLVSvGYYQGPHDLSHFVAILPSKSFRRKGAF------HTSGEVYGFF 166
|
170
....*....|....*...
gi 2222769220 157 L-TLEEPVPFDMVAYGRN 173
Cdd:pfam02027 167 ArSLGDAFPYDIVAVGRA 184
|
|
| PLN02676 |
PLN02676 |
polyamine oxidase |
213-271 |
2.28e-08 |
|
polyamine oxidase
Pssm-ID: 215362 [Multi-domain] Cd Length: 487 Bit Score: 57.03 E-value: 2.28e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 2222769220 213 PKPKVAIIGAGISGLVVASELLHAAVDDVTIYEASDRVGGKLWSHAFKDapsVVAEMGA 271
Cdd:PLN02676 25 PSPSVIIVGAGMSGISAAKTLSEAGIEDILILEATDRIGGRMRKANFAG---VSVELGA 80
|
|
| proto_IX_ox |
TIGR00562 |
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a ... |
213-290 |
6.10e-06 |
|
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a precursor of heme and chlorophyll. Bacillus subtilis HemY also has coproporphyrinogen III to coproporphyrin III oxidase activity in a heterologous expression system, although the role for this activity in vivo is unclear. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]
Pssm-ID: 213540 [Multi-domain] Cd Length: 462 Bit Score: 49.45 E-value: 6.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 213 PKPKVAIIGAGISGLVVASEL--LHAAVD-DVTIYEASDRVGGKLWShafKDAPSVVAEMGAMRFPPAASCLFFFLERYG 289
Cdd:TIGR00562 1 GKKHVVIIGGGISGLCAAYYLekEIPELPvELTLVEASDRVGGKIQT---VKEDGYLIERGPDSFLERKKSAPDLVKDLG 77
|
.
gi 2222769220 290 L 290
Cdd:TIGR00562 78 L 78
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| Amino_oxidase |
pfam01593 |
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ... |
224-707 |
7.14e-106 |
|
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.
Pssm-ID: 396255 [Multi-domain] Cd Length: 446 Bit Score: 330.61 E-value: 7.14e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 224 ISGLVVASELLHAAvDDVTIYEASDRVGGKLWSHAFKDapsVVAEMGAMRFPPAASCLFFFLERYGLSSMRPFPNPGTVD 303
Cdd:pfam01593 1 LAGLAAARELLRAG-HDVTVLEARDRVGGRIRTVRDDG---FLIELGAMWFHGAQPPLLALLKELGLEDRLVLPDPAPFY 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 304 TNLVYQGLRYmwkagqqpPKLFHRVYSGWRAFLKDGFhegdivlasPVAITQALKSGDIRRAHDSWqtwlNRFGRESFSS 383
Cdd:pfam01593 77 TVLFAGGRRY--------PGDFRRVPAGWEGLLEFGR---------LLSIPEKLRLGLAALASDAL----DEFDLDDFSL 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 384 AIERIFLGTHPPGG-ETWSFPHDWDLFKLMGIGSGGFG---PVFESGFIEILRLVINGYEENQRMCSEGISELPRRIATQ 459
Cdd:pfam01593 136 AESLLFLGRRGPGDvEVWDRLIDPELFAALPFASGAFAgdpSELSAGLALPLLWALLGEGGSLLLPRGGLGALPDALAAQ 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 460 VVnGVSVSQRIRhvqVRAIEKEKTKIKIRLKSGISELYDKVVVTSGLANIQlRHCLTCDTTifrAPVNQAVDNSHMTGSS 539
Cdd:pfam01593 216 LL-GGDVRLNTR---VRSIDREGDGVTVTLTDGEVIEADAVIVTVPLGVLK-RILFTPPLP---PEKARAIRNLGYGPVN 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 540 KLFLLTERKFWLDHIL--PSCVLMDGIAKAVYCLDYEPQDPNGKGLVLISYTWEDDSHKLLAVPDKKERFCLLRDAISRS 617
Cdd:pfam01593 288 KVHLEFDRKFWPDLGLlgLLSELLTGLGTAFSWLTFPNRAPPGKGLLLLVYVGPGDRARELEGLSDEELLQAVLRDLRKL 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 618 FPEfaqhlvpaCADYDQNVVQHDWLTDENAGGAFKLNRRGedfySEELFFQALDMTNDTGVYLAGCSCS--FTGGwVEGA 695
Cdd:pfam01593 368 FGE--------EAPEPLRVLVSDWHTDPWPRGSYSLPQYG----PGHDDYRPLARTPDPGLFFAGEHTStgYPGT-VEGA 434
|
490
....*....|..
gi 2222769220 696 IQTACNAVCAII 707
Cdd:pfam01593 435 IESGRRAARAVL 446
|
|
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
213-712 |
7.22e-68 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 230.19 E-value: 7.22e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 213 PKPKVAIIGAGISGLVVASELLHAAVDdVTIYEASDRVGGKLWSHAFkDAPSVVAEMGAMRFPPAASCLFFFLERYGLsS 292
Cdd:COG1231 6 RGKDVVIVGAGLAGLAAARELRKAGLD-VTVLEARDRVGGRVWTLRF-GDDGLYAELGAMRIPPSHTNLLALARELGL-P 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 293 MRPFPNpGTVDTNLVYQGLRYMWKAGQqppKLFHRVYSGWRAFLKdgfhegdivlaspvaitqalksgDIRRAHDSWQTW 372
Cdd:COG1231 83 LEPFPN-ENGNALLYLGGKRVRAGEIA---ADLRGVAELLAKLLR-----------------------ALAAALDPWAHP 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 373 LNRFGRESFSSAIERiflgthppggeTWSFPHDWDLFKLMGIGSGGfGPVFESGFIEILRLV-INGYEENQRMCSEGISE 451
Cdd:COG1231 136 AAELDRESLAEWLRR-----------NGASPSARRLLGLLGAGEYG-ADPDELSLLDLLRYAaSAGGGAQQFRIVGGMDQ 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 452 LPRRIATQVVNGVSVSQRirhvqVRAIEKEKTKIKIRLKSGISELYDKVVVT---SGLANIQLrhcltcdTTIFRAPVNQ 528
Cdd:COG1231 204 LPRALAAELGDRIRLGAP-----VTRIRQDGDGVTVTTDDGGTVRADAVIVTvppSVLRRIEF-------DPPLPAAKRA 271
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 529 AVDNSHMTGSSKLFLLTERKFWL-DHILPSCVLMDGIAKAVYCLDYEPQDPNGkglVLISYTWEDDSHKLLAVPDkKERF 607
Cdd:COG1231 272 AIQRLPYGAAIKVFLQFDRPFWEeDGLYGGISLTDLPIRQTWYPSNGPDGGAG---VLLGYVGGDDARALAALSP-EERV 347
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 608 CLLRDAISRSFPEFAQHLVpacadydqNVVQHDWLTDENAGGAFKLNRRGEDFYseelFFQALdMTNDTGVYLAGCSCSF 687
Cdd:COG1231 348 AAALEQLARIFGVYAAEPV--------DYVSTDWGRDPWSRGAYAAAPPGQLTA----AGPAL-AEPDGRIHFAGEHTSD 414
|
490 500
....*....|....*....|....*.
gi 2222769220 688 TG-GWVEGAIQTACNAVCAIIHNCGG 712
Cdd:COG1231 415 EWpGWVEGALESGERAAAEILARLGG 440
|
|
| RolB_RolC |
pfam02027 |
RolB/RolC glucosidase family; This family of proteins includes RolB and RolC. RolC releases ... |
1-173 |
4.69e-44 |
|
RolB/RolC glucosidase family; This family of proteins includes RolB and RolC. RolC releases cytokinins from glucoside conjugates. Whereas RolB hydrolyses indole glucosides.
Pssm-ID: 366884 Cd Length: 184 Bit Score: 156.83 E-value: 4.69e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 1 MVDKADELDRRVSDAFSEREASRGRRITQISGECSAGLACKR-LADGRFPEISAGEKVAALSA--YIYVGKEILGRILES 77
Cdd:pfam02027 13 NITDREELKLRLEQARSDYRAFVERDLLFAQRSWVARFLRKPcLDGPRLPGIFDGDTILLDDSplYVYCSREILRQCAES 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 78 EPWARARVSGLVAIDLAPFCMDFSEAQLLQTLFLLS-GKRCASSDLSHFVAISISKTARSRTLQmppyekGTTKRVTGFT 156
Cdd:pfam02027 93 RPLSSSSPSGLVATTLPPYREDITREQMRQLLNLVSvGYYQGPHDLSHFVAILPSKSFRRKGAF------HTSGEVYGFF 166
|
170
....*....|....*...
gi 2222769220 157 L-TLEEPVPFDMVAYGRN 173
Cdd:pfam02027 167 ArSLGDAFPYDIVAVGRA 184
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
214-503 |
5.99e-15 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 77.95 E-value: 5.99e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 214 KPKVAIIGAGISGLVVASELLHAAVdDVTIYEASDRVGGKLWSHAFKDapsVVAEMGAMRF----PPAASclffFLERYG 289
Cdd:COG1232 1 MKRVAVIGGGIAGLTAAYRLAKAGH-EVTVLEASDRVGGLIRTVEVDG---FRIDRGPHSFltrdPEVLE----LLRELG 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 290 LSSmrpfpnpgtvdtNLVY--QGLRYMWKAGQqppklFHRVYSGWRAFLKDGfhegdivLASPVAITQALKSGDIRR--- 364
Cdd:COG1232 73 LGD------------ELVWpnTRKSYIYYGGK-----LHPLPQGPLALLRSP-------LLSLAGKLRALLELLAPRrpp 128
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 365 -AHDSWQTWL-NRFGRESFSSAIERIFLGTHppGGE------TWSFPHdwdlFKLMGIGSGGfgpvfesgfieILRLVIN 436
Cdd:COG1232 129 gEDESLAEFVrRRFGREVYERLVEPLLEGVY--AGDpdelsaDWAFPR----LKRLELEHGS-----------LIKGALA 191
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2222769220 437 GYEENQ---RMCS--EGISELPRRIATQVVNGvsvsqRIR-HVQVRAIEKEKTKIKIRLKSGISELYDKVVVT 503
Cdd:COG1232 192 LRKGAKageVFGYlrGGLGTLVEALAEALEAG-----EIRlGTRVTAIEREGGGWRVTTSDGETIEADAVVSA 259
|
|
| PLN02676 |
PLN02676 |
polyamine oxidase |
213-271 |
2.28e-08 |
|
polyamine oxidase
Pssm-ID: 215362 [Multi-domain] Cd Length: 487 Bit Score: 57.03 E-value: 2.28e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 2222769220 213 PKPKVAIIGAGISGLVVASELLHAAVDDVTIYEASDRVGGKLWSHAFKDapsVVAEMGA 271
Cdd:PLN02676 25 PSPSVIIVGAGMSGISAAKTLSEAGIEDILILEATDRIGGRMRKANFAG---VSVELGA 80
|
|
| Ppro0129 |
COG2907 |
Predicted flavin-containing amine oxidase [General function prediction only]; |
213-258 |
2.63e-08 |
|
Predicted flavin-containing amine oxidase [General function prediction only];
Pssm-ID: 442151 [Multi-domain] Cd Length: 423 Bit Score: 56.66 E-value: 2.63e-08
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 2222769220 213 PKPKVAIIGAGISGLvVASELLHAAvDDVTIYEASDRVGGklwsHA 258
Cdd:COG2907 2 ARMRIAVIGSGISGL-TAAWLLSRR-HDVTLFEANDRLGG----HT 41
|
|
| PRK11883 |
PRK11883 |
protoporphyrinogen oxidase; Reviewed |
215-271 |
3.78e-08 |
|
protoporphyrinogen oxidase; Reviewed
Pssm-ID: 237009 [Multi-domain] Cd Length: 451 Bit Score: 56.40 E-value: 3.78e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 2222769220 215 PKVAIIGAGISGLVVASELLHAAVD-DVTIYEASDRVGGKLWSHAFKDAPsvvAEMGA 271
Cdd:PRK11883 1 KKVAIIGGGITGLSAAYRLHKKGPDaDITLLEASDRLGGKIQTVRKDGFP---IELGP 55
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
216-261 |
4.36e-08 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 56.05 E-value: 4.36e-08
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 2222769220 216 KVAIIGAGISGLVVASELLHAAVdDVTIYEASDRVGGKLWSHAFKD 261
Cdd:PRK07233 1 KIAIVGGGIAGLAAAYRLAKRGH-EVTVFEADDQLGGLAASFEFGG 45
|
|
| PLN02487 |
PLN02487 |
zeta-carotene desaturase |
213-289 |
3.03e-07 |
|
zeta-carotene desaturase
Pssm-ID: 215268 [Multi-domain] Cd Length: 569 Bit Score: 53.65 E-value: 3.03e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2222769220 213 PKPKVAIIGAGISGLVVASELLHAAvDDVTIYEASDRVGGKLWShaFKDAPSVVAEMGAMRFPPAASCLFFFLERYG 289
Cdd:PLN02487 74 PKLKVAIIGAGLAGMSTAVELLDQG-HEVDIYESRPFIGGKVGS--FVDKNGNHIEMGLHVFFGCYNNLFRLMKKVG 147
|
|
| COG3349 |
COG3349 |
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ... |
213-378 |
4.51e-07 |
|
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];
Pssm-ID: 442577 [Multi-domain] Cd Length: 445 Bit Score: 52.93 E-value: 4.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 213 PKPKVAIIGAGISGLVVASELLHAAVdDVTIYEASDRVGGKlwSHAFKDAPS-VVAEMGAMRFPPAASCLFFFLERYGLS 291
Cdd:COG3349 2 MPPRVVVVGGGLAGLAAAVELAEAGF-RVTLLEARPRLGGR--ARSFPDPDTgLPIDNGQHVLLGCYRNTLDLLRRIGAA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 292 SMRPFPNPGTVDTnlvYQGLRYMWKAGQQPPKLfhrvySGWRAFLkdGFHegDIVLASPVAITQALKSGDIRRAHD---- 367
Cdd:COG3349 79 DNLVGPEPLQFPL---PGGRRWTLRAPRLPAPL-----HLLRALL--RAP--GLSLADRLALLRLLTACRERRWRElddi 146
|
170
....*....|.
gi 2222769220 368 SWQTWLNRFGR 378
Cdd:COG3349 147 SVADWLRRHGQ 157
|
|
| COG3380 |
COG3380 |
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]; |
213-254 |
5.00e-07 |
|
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
Pssm-ID: 442607 [Multi-domain] Cd Length: 331 Bit Score: 52.19 E-value: 5.00e-07
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 2222769220 213 PKPKVAIIGAGISGLVVASELLHAAVdDVTIYEASDRVGGKL 254
Cdd:COG3380 2 SMPDIAIIGAGIAGLAAARALQDAGH-EVTVFEKSRGVGGRM 42
|
|
| PLN02576 |
PLN02576 |
protoporphyrinogen oxidase |
217-256 |
5.38e-07 |
|
protoporphyrinogen oxidase
Pssm-ID: 215314 [Multi-domain] Cd Length: 496 Bit Score: 52.71 E-value: 5.38e-07
10 20 30 40
....*....|....*....|....*....|....*....|
gi 2222769220 217 VAIIGAGISGLVVASELLHAAVDDVTIYEASDRVGGKLWS 256
Cdd:PLN02576 15 VAVVGAGVSGLAAAYALASKHGVNVLVTEARDRVGGNITS 54
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
209-252 |
2.78e-06 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 50.25 E-value: 2.78e-06
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 2222769220 209 PEDVPKPKVAIIGAGISGLVVASELLHAAVdDVTIYEASDRVGG 252
Cdd:COG2072 1 TAATEHVDVVVIGAGQAGLAAAYHLRRAGI-DFVVLEKADDVGG 43
|
|
| PRK07208 |
PRK07208 |
hypothetical protein; Provisional |
213-252 |
3.64e-06 |
|
hypothetical protein; Provisional
Pssm-ID: 235967 [Multi-domain] Cd Length: 479 Bit Score: 50.27 E-value: 3.64e-06
10 20 30 40
....*....|....*....|....*....|....*....|
gi 2222769220 213 PKPKVAIIGAGISGLVVASELLHAAVdDVTIYEASDRVGG 252
Cdd:PRK07208 3 NKKSVVIIGAGPAGLTAAYELLKRGY-PVTVLEADPVVGG 41
|
|
| GltD |
COG0493 |
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ... |
197-254 |
3.96e-06 |
|
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 440259 [Multi-domain] Cd Length: 434 Bit Score: 49.75 E-value: 3.96e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 2222769220 197 DQCSDSGRIGFFPEDVP-KPKVAIIGAGISGLVVASELLHAAVdDVTIYEASDRVGGKL 254
Cdd:COG0493 103 DKAFEEGWVKPPPPAPRtGKKVAVVGSGPAGLAAAYQLARAGH-EVTVFEALDKPGGLL 160
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
214-254 |
5.92e-06 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 49.46 E-value: 5.92e-06
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 2222769220 214 KPKVAIIGAGISGLVVASELLHAAVdDVTIYEASDRVGGKL 254
Cdd:COG1233 3 MYDVVVIGAGIGGLAAAALLARAGY-RVTVLEKNDTPGGRA 42
|
|
| proto_IX_ox |
TIGR00562 |
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a ... |
213-290 |
6.10e-06 |
|
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a precursor of heme and chlorophyll. Bacillus subtilis HemY also has coproporphyrinogen III to coproporphyrin III oxidase activity in a heterologous expression system, although the role for this activity in vivo is unclear. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]
Pssm-ID: 213540 [Multi-domain] Cd Length: 462 Bit Score: 49.45 E-value: 6.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 213 PKPKVAIIGAGISGLVVASEL--LHAAVD-DVTIYEASDRVGGKLWShafKDAPSVVAEMGAMRFPPAASCLFFFLERYG 289
Cdd:TIGR00562 1 GKKHVVIIGGGISGLCAAYYLekEIPELPvELTLVEASDRVGGKIQT---VKEDGYLIERGPDSFLERKKSAPDLVKDLG 77
|
.
gi 2222769220 290 L 290
Cdd:TIGR00562 78 L 78
|
|
| PRK11749 |
PRK11749 |
dihydropyrimidine dehydrogenase subunit A; Provisional |
216-252 |
8.72e-06 |
|
dihydropyrimidine dehydrogenase subunit A; Provisional
Pssm-ID: 236967 [Multi-domain] Cd Length: 457 Bit Score: 49.02 E-value: 8.72e-06
10 20 30
....*....|....*....|....*....|....*..
gi 2222769220 216 KVAIIGAGISGLVVASELLHAAVdDVTIYEASDRVGG 252
Cdd:PRK11749 142 KVAVIGAGPAGLTAAHRLARKGY-DVTIFEARDKAGG 177
|
|
| gltD |
PRK12810 |
glutamate synthase subunit beta; Reviewed |
216-254 |
2.39e-05 |
|
glutamate synthase subunit beta; Reviewed
Pssm-ID: 237213 [Multi-domain] Cd Length: 471 Bit Score: 47.47 E-value: 2.39e-05
10 20 30
....*....|....*....|....*....|....*....
gi 2222769220 216 KVAIIGAGISGLVVASELLHAAVdDVTIYEASDRVGGKL 254
Cdd:PRK12810 145 KVAVVGSGPAGLAAADQLARAGH-KVTVFERADRIGGLL 182
|
|
| PLN02568 |
PLN02568 |
polyamine oxidase |
214-271 |
3.80e-05 |
|
polyamine oxidase
Pssm-ID: 215308 [Multi-domain] Cd Length: 539 Bit Score: 47.13 E-value: 3.80e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2222769220 214 KPKVAIIGAGISGLVVASELLHAAVD----DVTIYEASDRVGGKLWSHAFKdapSVVAEMGA 271
Cdd:PLN02568 5 KPRIVIIGAGMAGLTAANKLYTSSAAndmfELTVVEGGDRIGGRINTSEFG---GERIEMGA 63
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
219-261 |
5.12e-05 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 41.75 E-value: 5.12e-05
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 2222769220 219 IIGAGISGLVVASELLHAAVdDVTIYEASDRVGGKLWSHAFKD 261
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRGF-RVLVLEKRDRLGGNAYSYRVPG 42
|
|
| PRK12814 |
PRK12814 |
putative NADPH-dependent glutamate synthase small subunit; Provisional |
206-254 |
2.59e-04 |
|
putative NADPH-dependent glutamate synthase small subunit; Provisional
Pssm-ID: 139246 [Multi-domain] Cd Length: 652 Bit Score: 44.33 E-value: 2.59e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 2222769220 206 GFFPEDVPKP--KVAIIGAGISGLVVASELLhAAVDDVTIYEASDRVGGKL 254
Cdd:PRK12814 183 RYIPERAPKSgkKVAIIGAGPAGLTAAYYLL-RKGHDVTIFDANEQAGGMM 232
|
|
| PLN02268 |
PLN02268 |
probable polyamine oxidase |
215-254 |
2.67e-04 |
|
probable polyamine oxidase
Pssm-ID: 177909 [Multi-domain] Cd Length: 435 Bit Score: 43.91 E-value: 2.67e-04
10 20 30 40
....*....|....*....|....*....|....*....|
gi 2222769220 215 PKVAIIGAGISGLvVASELLHAAVDDVTIYEASDRVGGKL 254
Cdd:PLN02268 1 PSVIVIGGGIAGI-AAARALHDASFKVTLLESRDRIGGRV 39
|
|
| YdhS |
COG4529 |
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only]; |
213-251 |
4.26e-04 |
|
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
Pssm-ID: 443597 [Multi-domain] Cd Length: 466 Bit Score: 43.40 E-value: 4.26e-04
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 2222769220 213 PKPKVAIIGAGISGLVVASELLHAAVD--DVTIYEASDRVG 251
Cdd:COG4529 4 ARKRIAIIGGGASGTALAIHLLRRAPEplRITLFEPRPELG 44
|
|
| LhgO |
COG0579 |
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism]; |
217-251 |
8.52e-04 |
|
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
Pssm-ID: 440344 [Multi-domain] Cd Length: 418 Bit Score: 42.44 E-value: 8.52e-04
10 20 30
....*....|....*....|....*....|....*
gi 2222769220 217 VAIIGAGISGLVVASELLHAAVDDVTIYEASDRVG 251
Cdd:COG0579 7 VVIIGAGIVGLALARELSRYEDLKVLVLEKEDDVA 41
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
213-259 |
1.18e-03 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 41.85 E-value: 1.18e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 2222769220 213 PKPKVAIIGAGISGLVVASELLHAAVdDVTIYEASDRVGGKLWSHAF 259
Cdd:COG0654 2 MRTDVLIVGGGPAGLALALALARAGI-RVTVVERAPPPRPDGRGIAL 47
|
|
| PRK12831 |
PRK12831 |
putative oxidoreductase; Provisional |
209-254 |
1.29e-03 |
|
putative oxidoreductase; Provisional
Pssm-ID: 183780 [Multi-domain] Cd Length: 464 Bit Score: 41.93 E-value: 1.29e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 2222769220 209 PEDVPKPKVAIIGAGISGLVVASELlhAAVD-DVTIYEASDRVGGKL 254
Cdd:PRK12831 135 TEEKKGKKVAVIGSGPAGLTCAGDL--AKMGyDVTIFEALHEPGGVL 179
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
207-252 |
1.88e-03 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 41.32 E-value: 1.88e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 2222769220 207 FFPEDVPKpKVAIIGAGISGLVVASeLLHAAVDDVTIYEASDRVGG 252
Cdd:PRK06292 163 FELDKLPK-SLAVIGGGVIGLELGQ-ALSRLGVKVTVFERGDRILP 206
|
|
| PRK12778 |
PRK12778 |
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ... |
208-254 |
3.44e-03 |
|
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;
Pssm-ID: 237200 [Multi-domain] Cd Length: 752 Bit Score: 40.88 E-value: 3.44e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 2222769220 208 FPEDVPK--PKVAIIGAGISGLVVASELLHAAVdDVTIYEASDRVGGKL 254
Cdd:PRK12778 423 VPEVAEKngKKVAVIGSGPAGLSFAGDLAKRGY-DVTVFEALHEIGGVL 470
|
|
| Pyr_redox |
pfam00070 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
216-254 |
4.31e-03 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 425450 [Multi-domain] Cd Length: 80 Bit Score: 36.80 E-value: 4.31e-03
10 20 30
....*....|....*....|....*....|....*....
gi 2222769220 216 KVAIIGAGISGLVVASElLHAAVDDVTIYEASDRVGGKL 254
Cdd:pfam00070 1 RVVVVGGGYIGLELAGA-LARLGSKVTVVERRDRLLPGF 38
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
216-302 |
8.75e-03 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 38.92 E-value: 8.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222769220 216 KVAIIGAGISGLVVAselLHAAV--DDVTIYEASDRVG--------GKLWSHAFKDAPSVVAEMGAMrfppAASCLFFFL 285
Cdd:pfam01266 1 DVVVIGGGIVGLSTA---YELARrgLSVTLLERGDDPGsgasgrnaGLIHPGLRYLEPSELARLALE----ALDLWEELE 73
|
90
....*....|....*..
gi 2222769220 286 ERYGLSSmrPFPNPGTV 302
Cdd:pfam01266 74 EELGIDC--GFRRCGVL 88
|
|
|