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Conserved domains on  [gi|2293748519|ref|WP_259004478|]
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fimbria/pilus periplasmic chaperone [Serratia sp. AKBS12]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK15195 super family cl33105
molecular chaperone FimC;
5-221 2.50e-105

molecular chaperone FimC;


The actual alignment was detected with superfamily member PRK15195:

Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 303.32  E-value: 2.50e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519   5 LLFGALAVSASGVQAGGIALGATRVVYPADAKQTSLAVTNSDKHLRFLIQSWIETTNGEKTTDFIMTPPLFVSKPQGENT 84
Cdd:PRK15195   10 IIIFYLIISASVHAAGGIALGATRVIYPADAKQTSLAIRNSHTNERYLVNSWIENSSGVKEKSFIVTPPLFVSEPKSENT 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  85 LRIMYVGKKLPQDRESVFWINVKAIPAVEREAVQGKNVLQLAVLSRIKLFVRPAGLPTSPADAPAKLTFNKTGGQLIIDN 164
Cdd:PRK15195   90 LRIIYAGPPLAADRESLFWMNVKAIPSVDKNALEGRNVLQLAILSRIKLFVRPINLQELPEEAPDTLKFSRSGNHLKVHN 169

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2293748519 165 PTPYYITLVNFTIGTHNLPNTMVAPQSNSGIAIPTGAAGPIKYQTINDYGANTPSIT 221
Cdd:PRK15195  170 PSPYYVTLVNLQVGSQKLGNAMIAPKVNSQIPLPSGVQGKLKFQTVNDYGAVTPARE 226
 
Name Accession Description Interval E-value
PRK15195 PRK15195
molecular chaperone FimC;
5-221 2.50e-105

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 303.32  E-value: 2.50e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519   5 LLFGALAVSASGVQAGGIALGATRVVYPADAKQTSLAVTNSDKHLRFLIQSWIETTNGEKTTDFIMTPPLFVSKPQGENT 84
Cdd:PRK15195   10 IIIFYLIISASVHAAGGIALGATRVIYPADAKQTSLAIRNSHTNERYLVNSWIENSSGVKEKSFIVTPPLFVSEPKSENT 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  85 LRIMYVGKKLPQDRESVFWINVKAIPAVEREAVQGKNVLQLAVLSRIKLFVRPAGLPTSPADAPAKLTFNKTGGQLIIDN 164
Cdd:PRK15195   90 LRIIYAGPPLAADRESLFWMNVKAIPSVDKNALEGRNVLQLAILSRIKLFVRPINLQELPEEAPDTLKFSRSGNHLKVHN 169

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2293748519 165 PTPYYITLVNFTIGTHNLPNTMVAPQSNSGIAIPTGAAGPIKYQTINDYGANTPSIT 221
Cdd:PRK15195  170 PSPYYVTLVNLQVGSQKLGNAMIAPKVNSQIPLPSGVQGKLKFQTVNDYGAVTPARE 226
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
4-218 5.35e-76

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 229.11  E-value: 5.35e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519   4 TLLFGALAVSASGVQAGGIALGATRVVYPADAKQTSLAVTNSDKHlRFLIQSWIE-----TTNGEKTTDFIMTPPLFVSK 78
Cdd:COG3121     7 LLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDT-PYLVQSWVDdwdqdAGPDKATAPFVVTPPLFRLE 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  79 PQGENTLRIMYVGKKLPQDRESVFWINVKAIPAVEREAvQGKNVLQLAVLSRIKLFVRPAGLPTSPADAPAKLTFNKTGG 158
Cdd:COG3121    86 PGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASE-EGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSLVGN 164

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2293748519 159 QLIIDNPTPYYITLVNFTIGTHN----LPNTMVAPQSNSGIAIPTGAAGP----IKYQTINDYGANTP 218
Cdd:COG3121   165 GLTVTNPGPYYVTLSDLSLGAGGkklkKGLGMVLPGSTRRWPLPAGASLAaggkVTWATINDYGGAVP 232
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 22-141 1.01e-46

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 150.43  E-value: 1.01e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  22 IALGATRVVYPADAKQTSLAVTNSDKHlRFLIQSWIETTNGEKT-----TDFIMTPPLFVSKPQGENTLRIMYVGKKLPQ 96
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDN-PYLVQSWVDDGNEEGTdekakAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPT 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 2293748519  97 DRESVFWINVKAIPAVEREAvQGKNVLQLAVLSRIKLFVRPAGLP 141
Cdd:pfam00345  80 DRESLFWLNVLEIPPKDKPK-GGQNGLQLALRSRIKLFYRPAGLA 123
 
Name Accession Description Interval E-value
PRK15195 PRK15195
molecular chaperone FimC;
5-221 2.50e-105

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 303.32  E-value: 2.50e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519   5 LLFGALAVSASGVQAGGIALGATRVVYPADAKQTSLAVTNSDKHLRFLIQSWIETTNGEKTTDFIMTPPLFVSKPQGENT 84
Cdd:PRK15195   10 IIIFYLIISASVHAAGGIALGATRVIYPADAKQTSLAIRNSHTNERYLVNSWIENSSGVKEKSFIVTPPLFVSEPKSENT 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  85 LRIMYVGKKLPQDRESVFWINVKAIPAVEREAVQGKNVLQLAVLSRIKLFVRPAGLPTSPADAPAKLTFNKTGGQLIIDN 164
Cdd:PRK15195   90 LRIIYAGPPLAADRESLFWMNVKAIPSVDKNALEGRNVLQLAILSRIKLFVRPINLQELPEEAPDTLKFSRSGNHLKVHN 169

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2293748519 165 PTPYYITLVNFTIGTHNLPNTMVAPQSNSGIAIPTGAAGPIKYQTINDYGANTPSIT 221
Cdd:PRK15195  170 PSPYYVTLVNLQVGSQKLGNAMIAPKVNSQIPLPSGVQGKLKFQTVNDYGAVTPARE 226
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
4-218 5.35e-76

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 229.11  E-value: 5.35e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519   4 TLLFGALAVSASGVQAGGIALGATRVVYPADAKQTSLAVTNSDKHlRFLIQSWIE-----TTNGEKTTDFIMTPPLFVSK 78
Cdd:COG3121     7 LLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDT-PYLVQSWVDdwdqdAGPDKATAPFVVTPPLFRLE 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  79 PQGENTLRIMYVGKKLPQDRESVFWINVKAIPAVEREAvQGKNVLQLAVLSRIKLFVRPAGLPTSPADAPAKLTFNKTGG 158
Cdd:COG3121    86 PGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASE-EGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSLVGN 164

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2293748519 159 QLIIDNPTPYYITLVNFTIGTHN----LPNTMVAPQSNSGIAIPTGAAGP----IKYQTINDYGANTP 218
Cdd:COG3121   165 GLTVTNPGPYYVTLSDLSLGAGGkklkKGLGMVLPGSTRRWPLPAGASLAaggkVTWATINDYGGAVP 232
PRK15208 PRK15208
molecular chaperone LpfB;
9-221 4.37e-68

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 208.61  E-value: 4.37e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519   9 ALAVSASGVQAGGIALGATRVVYPADAKQTSLAVTNSDKHLRFLIQSWIETTNGEKTTDFIMTPPLFVSKPQGENTLRIM 88
Cdd:PRK15208   10 ALALIAQNSFAGGVALSSTRVIYDGSKKEASLTVNNKSKTEEFLIQSWIDDANGNKKTPFIITPPLFKLDPTKNNVLRIV 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  89 YVGKKLPQDRESVFWINVKAIPAVEREAvQGKNVLQLAVLSRIKLFVRPAGLPTSPADAPAKLTFNKTGGQLIIDNPTPY 168
Cdd:PRK15208   90 NITNTLPQDRESVYWINVKAIPAKSEDA-ENKNVLQIAVRTRLKLFYRPAGLKGNSMDAWNKLRFTRAGNQIKVENPSAF 168

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2293748519 169 YITLVNFTIGTHNLPNT-MVAPQSNSGIAIP--TGAAGPIKYQTINDYGANTPSIT 221
Cdd:PRK15208  169 NLTFNQFYANGRDIEKAgMVPAKGSLNIELPagTGKVSEVKYNIINDFGTAGEMLT 224
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 3-219 1.51e-67

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 207.31  E-value: 1.51e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519   3 LTLLFGALAVSASgVQAGGIALGATRVVYPADAKQTSLAVTNSDKHLRFLIQSWIETTNGEKTTDFIMTPPLFVSKPQGE 82
Cdd:PRK15188   11 LLLLLSAAGLSFA-AQAGGIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFIITPPLFVIQPKKE 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  83 NTLRIMYVGKKLPQDRESVFWINVKAIPAVEREAVQGkNVLQLAVLSRIKLFVRPAGLPTSPADAPAKLTFNKTGGQLII 162
Cdd:PRK15188   90 NILRIMYVGPSLPTDRESVFYLNSKAIPSVDKNKLTG-NSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQLTI 168

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2293748519 163 DNPTPYYITLVNFTIGTHNLPNTMVAPQsnSGIAIPtGAAGPIKYQTINDYGANTPS 219
Cdd:PRK15188  169 TNPSPYYVSMVELYSAGKKLPNTMVPPK--GAITLP-ATPGQVSLRTVNDFGATTPA 222
PRK09926 PRK09926
fimbrial chaperone;
4-216 3.97e-50

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 163.35  E-value: 3.97e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519   4 TLLFGALAVSASGVQAGgIALGATRVVYPADAKQTSLAVTN-SDKHLrfLIQSWIETTN-----GEKTTDFIMTPPLFVS 77
Cdd:PRK09926   10 ALCFATCMAFSSSSIAD-IVISGTRIIYKSDQKDVNVRLENkGNNPL--LVQSWLDTGDdnaepGSIKVPFTATPPVSRI 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  78 KPQGENTLRIMYVGKK-LPQDRESVFWINVKAIP-AVEREAVQGKNVLQLAVLSRIKLFVRPAGLPTSPADAPAKLTFNK 155
Cdd:PRK09926   87 DPKRGQTIKLMYTASTaLPKDRESVFWFNVLEVPpKPDAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPLALKWSW 166

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2293748519 156 TGGQ----LIIDNPTPYYITL--VNFTIG--THNLPNTMVAPQSNSGIAIP----TGAAGPIKYQTINDYGAN 216
Cdd:PRK09926  167 AGSEgkasLRVTNPTPYYVSFssGDLEAGgkRYPVDSKMIAPFSDESMKVKglsgKASSGKVHFYAINDFGGA 239
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 22-141 1.01e-46

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 150.43  E-value: 1.01e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  22 IALGATRVVYPADAKQTSLAVTNSDKHlRFLIQSWIETTNGEKT-----TDFIMTPPLFVSKPQGENTLRIMYVGKKLPQ 96
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDN-PYLVQSWVDDGNEEGTdekakAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPT 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 2293748519  97 DRESVFWINVKAIPAVEREAvQGKNVLQLAVLSRIKLFVRPAGLP 141
Cdd:pfam00345  80 DRESLFWLNVLEIPPKDKPK-GGQNGLQLALRSRIKLFYRPAGLA 123
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 5-218 1.80e-46

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 153.40  E-value: 1.80e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519   5 LLFGALAvsasgvQAGGIALGATRVVYPADAKQTSLAVTNSDkHLRFLIQSW---IETTNGEKTTDFIMTPPLFVSKPQG 81
Cdd:PRK15299   13 LLCGSLA------HAAGINIGTTRVIFHGDAKDASISISNSD-NVPYLIQSWaqsISETGASGDAPFMVTPPLFRLNGGQ 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  82 ENTLRIMYVGKKLPQDRESVFWINVKAIPAVEREavQGKNVLQLAVLSRIKLFVRPAGLPTSPADAPAKLTFNKTGGQLI 161
Cdd:PRK15299   86 KNVLRIIRTGGNLPEDRESLYWLDIKSIPSSNPD--NKHNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWSRQGRTLT 163

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2293748519 162 IDNPTPYYITLVNFTIGTHNLPNT-MVAPQSNSGIAIPTGAAGPIKYQTINDYGANTP 218
Cdd:PRK15299  164 VKNPTPYYMNFATLSVGSQKVKAPrYVAPFGNAQYTLPAAASGPIAWSIINDFGGTGP 221
lfpB PRK15290
fimbrial chaperone;
3-215 8.00e-45

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 149.76  E-value: 8.00e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519   3 LTLLFGALAVSASGVQAGGialgaTRVVYPADAKQTSLAVTNSDKHLRFLIQSWIETTNGEKTTD--FIMTPPLFVSKPQ 80
Cdd:PRK15290   25 LSVFLGQPALTYAGVVIGG-----TRVVYLSNNPDKSISVFSKEEKIPYLIQAWVDPFNKEDKSKapFTVIPPVSRLEPS 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  81 GENTLRIMYV-GKKLPQDRESVFWINVKAIPAVEREavQGKNVLQLAVLSRIKLFVRPAGLPTSPADAPAKLTFNKTGGQ 159
Cdd:PRK15290  100 QEKVLRIIHTkGVSLPDDRESVFWLNIKNIPPSASN--KATNSLEIAVKTRIKLFWRPASIRLIPEDAAPKVKWRREGRN 177

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2293748519 160 LIIDNPTPYYITLVNFTIGTHNLPNTMVAPQSNSGIAIPTGAAG-PIKYQTINDYGA 215
Cdd:PRK15290  178 LIAENPNPIHISVMDVIVDGHDVPLNMIRPFETLTLPLPANSAGgQMTWRFINDYGA 234
PRK15295 PRK15295
fimbrial assembly chaperone;
10-224 3.16e-44

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 147.78  E-value: 3.16e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  10 LAVSASGVQAGgIALGATRVVYPADAKQTSLAVTNSDKHLRfLIQSWIETTNGEKTTD--FIMTPPLFVSKPQGENTLRI 87
Cdd:PRK15295   10 VLLTSHVAHAS-IVVGGTRLVFDGNNDESSINVENKDSKAN-LVQSWLSVVDPQVTNKqaFIITPPLFRLDAGQKNSIRV 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  88 MYVGKKLPQDRESVFWINVKAIPAVerEAVQGKNVLQLAVLSRIKLFVRPAGLPTSPADAPA-KLTFNKTGGQLIIDNPT 166
Cdd:PRK15295   88 IRSGAPLPADRESMYWLNIKGIPSI--DDNASANRVEISINTQIKLIYRPPALTKSTPDSQSqQLKWQTAGDVITVNNPT 165

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2293748519 167 PYYITLVNFTIGTHNLPN-TMVAPQSNSGIAIPTGAA--GPIKYQTINDYGANTPSITGVV 224
Cdd:PRK15295  166 PYYMNFASVTLNSHEVKSaTFVPPKSSASFKLGSTAAphGTVTWRLISDYGMSLEPHSGSF 226
PRK15211 PRK15211
fimbrial chaperone;
3-215 1.99e-34

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 122.62  E-value: 1.99e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519   3 LTLLFGALAVSAsgvqaggIALGATRVVYPADAKQTSLAVTN-SDKhlRFLIQSWIETTN-GEKTTDFIMTPPLFVSKPQ 80
Cdd:PRK15211   12 LSLAVCGQAMAA-------FVLNGTRFIYDEGRKNISFEVTNqADQ--TYGGQVWIDNTTqGSSTVYMVPAPPFFKVRPK 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  81 GENTLRIMYVGKKLPQDRESVFWINVKAIPAVEREAvqGKNVLQLAVLSRIKLFVRPAGLPTSPADAPAKLTFNKTGGQL 160
Cdd:PRK15211   83 EKQIIRIMKTDSALPKDRESLFWLNVQEIPPKPKAS--EGNVLAVALNTQVKLIYRPKALKEGRENAEKNLQIIHRGGET 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2293748519 161 IIDNPTPYYITLVNFTIGTHNL--------PNTMVAPQSNSGIAIPTgAAGPIKYQTINDYGA 215
Cdd:PRK15211  161 YLKNPTPYYFAVTGVKLNGQPVklsdrvmnEIAQLAPFSEVSLGKLS-LNGTVTVQAVNDWGG 222
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 5-215 6.58e-32

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 116.41  E-value: 6.58e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519   5 LLFGALAVSASGVQAGGIALGATRVVYPADAKQTSLAVTNSDKHLRFLIQSWIETTNGEKTTDFIMTPPLFVSKPQGENT 84
Cdd:PRK15254    1 VILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVTDADGVRTDALMALPPLQRIDAGQKSQ 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  85 LRIMYV---GKKLPQDRESVFWINVKAIPAVEREavqgKNVLQLAVLSRIKLFVRPAGLPTSPADAPA-KLTFNKTGGQL 160
Cdd:PRK15254   81 VRITQVrglTDKLPQDRETLFWFNVRGVPPKPED----DNVLQLAMQSQLKLFYRPKAIIRSSSDQPErKLTAERNAGHL 156

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2293748519 161 IIDNPTPYYITLVNFTIG-THNLP----NTMVAPQSnsgiAIPTGAAGPIKYQT-----INDYGA 215
Cdd:PRK15254  157 TLRNPTPYYITVAWLGADrSHRLSgfreGVMVPPLG----SLPLKAVLPAETRTlwvgyIDDYGG 217
PRK15249 PRK15249
fimbrial chaperone;
6-215 1.26e-31

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 116.05  E-value: 1.26e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519   6 LFGALAVSASGVQAGGIALGaTRVVYPADAKQTSLAVTNSDKhLRFLIQSWIEttNGE--------KTTDFIMTPPLFVS 77
Cdd:PRK15249   15 VFLFLALPATASWASVTILG-SRIIYPSTASSVDVQLKNNDA-IPYIVQTWFD--DGDmntspensSAMPFIATPPVFRI 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  78 KPQGENTLRIMYVGKK-LPQDRESVFWINVKAIPAVEREAVQGKNVLQLAVLSRIKLFVRPAGLpTSPADAPAKLTF--- 153
Cdd:PRK15249   91 QPKAGQVVRVIYNNTKkLPQDRESVFWFNVLQVPPTNIGSDSGQNKMLVMLRSRIKLFYRPDGL-GKPDNLAKKLQIktv 169

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2293748519 154 -NKTGGQLI-IDNPTPYYITLVNFTI----GTHNLPNTMVAPQSN-----SGIAIPTGAAGPIKYQTINDYGA 215
Cdd:PRK15249  170 nKGSGKSGIvIVNPQPWFASLSNLNVkvngASYNLDADMIAPFSSqtwwlPGKRSLKSFSGTVTVTLVNDQGA 242
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
20-214 4.11e-30

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 111.72  E-value: 4.11e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  20 GGIALGATRVVYPADAKQTSLAVTNSDKHLrFLIQS-------WIETTNGEKTTDFIMTPPLFVSKPQGENTLRIMYVGK 92
Cdd:PRK15192   22 AGVVIGGTRFIYHAGAPALSVPVSNHSEAS-WLIDThilpggrWPGTKNEGNITPFVVTPPLFMLSARQENSMRVVYTGA 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  93 KLPQDRESVFWINVKAIPAVEREAvqgkNVLQLAVLSRIKLFVRPAGLPTSPADAPAKLTFNKTGGQLIIDNPTPYYITL 172
Cdd:PRK15192  101 PLPADRESLFTLSIAAIPSGKPEA----NRVQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSLTPDGATVRNPTPYYVTL 176

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2293748519 173 VnftigthnLPNTMVAPQSNSGIAIPTGAAG----------PIKYQTINDYG 214
Cdd:PRK15192  177 F--------LLRANERAQDNAGVVAPFATRQtdwcrhtvrcTVRWQSINDYG 220
PRK15224 PRK15224
pili assembly chaperone PapD;
15-225 1.87e-29

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 109.83  E-value: 1.87e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  15 SGVQAGGIALGATRVVYPADAKQTSLAVTNSDKHlRFLIQSWIETTNGEKTTDFIMTPPLFVSKPQGENTLRIMYVGKKL 94
Cdd:PRK15224   23 LNTKSFSVKLGATRVIYHAGTAGATLSVSNPQNY-PILVQSSVKAADKSSPAPFLVMPPLFRLEANQQSQLRIVRTGGDM 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  95 PQDRESVFWINVKAIPAV-EREAVQGKNV---LQLAVLSRIKLFVRPAGLPTSPADAPAKLTFNKTGGQLIIDNPTPYYI 170
Cdd:PRK15224  102 PTDRETLQWVCIKAVPPEnEPSDTQAKGAtldLNLSINVCDKLIFRPDAVKGTPEDVAGNLRWVETGNKLKVENPTPFYM 181

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2293748519 171 TLVNFTIGTHNLPN-TMVAPQSNSGIAIPTGAAGPIKYQTINDYGANTPSITGVVK 225
Cdd:PRK15224  182 NLASVTVGGKPITGlEYIPPFADKTLNMPGSAHGDIEWRVITDFGGESHPFHYVLK 237
PRK15285 PRK15285
fimbrial chaperone StfD;
10-220 2.79e-27

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 104.48  E-value: 2.79e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  10 LAVSASGVQAGGIALGATRVVYPADAKQTSLAVTNSDKHLRFLIQSWIETTNGEK-TTDFIMTPPLFVSKPQGENTLRI- 87
Cdd:PRK15285   15 LLLGGYGSAQAAIAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKiTSPLIVVPPVQRIEPSAIGQVKIq 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  88 -MYVGKKLPQDRESVFWINVKAIPAVEREAvqgkNVLQLAVLSRIKLFVRPAGLPTSPADAP--AKLTFNKTGGQLIIDN 164
Cdd:PRK15285   95 gMPALASLPQDRETLFYYNVREIPPQSDKP----NTLQIALQTRIKVFYRPQALSKIDMQHPwqYKITLQRQGNGYQVSN 170

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2293748519 165 PTPYYITLVNFTIGTHNLPNT-----MVAPQSN---SGIAIPTGAAGPIKYqtINDYGANTPSI 220
Cdd:PRK15285  171 PTGYYVVLSNASNRMDGTPARgfsplVIAPKSNvtlGGDASELGHSPVLTY--VNDYGARLPLI 232
PRK11385 PRK11385
fimbrial chaperone;
5-215 7.47e-27

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 102.90  E-value: 7.47e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519   5 LLFGALAVSASGVQAGGIALGATRVVYPADAKQTSLAVTNSDKHlRFLIQSWIET----TNGEKTT---DFIMTPPLFVS 77
Cdd:PRK11385   11 LIFAVLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQE-SWLINSKINRptrwAGGEASTvpaPLLAAPPLILL 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  78 KPQGENTLRIMYVGKK-LPQDRESVFWINVKAIPA--VEREAVQgknvlqLAVLSRIKLFVRPAGLPTSPADAPAKLTFN 154
Cdd:PRK11385   90 KPGTTGTLRLLRTESDiLPVDRETLFELSIASVPSgkVENQSVK------VAMRSVFKLFWRPEGLPGDPLEAYQQLRWT 163

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2293748519 155 KTGGQLIIDNPTPYYITLVNFTIGTHNLPNTMVAPQSNSGIAIPTGAAGP--IKYQTINDYGA 215
Cdd:PRK11385  164 RNSQGVQLTNPTPYYINLIQVSVNGKALSNAGVVPPKSQRQTSWCQAIAPchVAWRAINDYGG 226
PRK15246 PRK15246
fimbrial assembly chaperone;
16-214 2.02e-26

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 101.96  E-value: 2.02e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  16 GVQAGGIALGATRVVYPADAKQTSLAVTNsDKHLRFLIQSW-----IETTNGEKTTDFIMTPPLFVSKPQGENTLRIMYV 90
Cdd:PRK15246    6 GPAQAAVNIDRTRIIFASDDVAQSLTLSN-DNTTPMLLQVWtdagnIDASPDNSKTPLVALPPVFKMQPGELRTLRLLLS 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  91 GKK-LPQDRESVFWINVKAIPAVEREAVQGKNVLQLAVLSRIKLFVRPAGLPTSPADAPAKLTFNKTGGQLIIDNPTPYY 169
Cdd:PRK15246   85 SRQqLATDRESLFWLNIYQIPPVTQDIKNHPRKLVLPLRLRLKILIRPTGLKAPTEAEEKKLRFIAKENTIRIVNPTSWY 164

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 2293748519 170 ITLVNFTIGTHNLPNTMVAPQSNSGIAIPTG--AAGPIKYQTINDYG 214
Cdd:PRK15246  165 MSLTLTMDNKKSIGDIMVAPKTALDVPLTRSptPGASINYAVINDSG 211
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 21-214 5.19e-25

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 98.20  E-value: 5.19e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  21 GIALGATRVVYPADAKQTSLAVTNSDKHLRfLIQSWIETTNG----EKT-TDFIMTPPLFVSKPQGENTLRIMYVGKKLP 95
Cdd:PRK15253   34 GIVIYGTRVIYPAEKKEVVVQLVNQGEQAS-LVQSWIDDGNTslppEKIqVPFMLTPPVARVAAESGQQIKIKKMPNSLP 112

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  96 QDRESVFWINVKAIPAVEREAvQGKNVLQLAVLSRIKLFVRPAGLPTSPADAPAKLTFNKTGGQLIIDNPTPYYITLVNF 175
Cdd:PRK15253  113 DNKESLFYLNVLDIPPNSQEN-AGKNVLKFAMQNRIKLIWRPSRIAAVTKDSFQRIGLFRSNKTVIMKNDTANWITVTDV 191

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 2293748519 176 TIGTH--NLPNTMVAPQSNSGIAIPTGAAGPIKYQTINDYG 214
Cdd:PRK15253  192 KAGNTkiNDQTIMLPPLSTQNINMKYASTSQYEVTIIDDNG 232
PRK15218 PRK15218
fimbrial assembly chaperone;
9-200 1.14e-23

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 94.28  E-value: 1.14e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519   9 ALAVSASGVQA-GGIALGATRVVYPADAKQTSLAVTNSDKHlRFLIQSWIEttNGEKT-------TDFIMTPPLFVSKPQ 80
Cdd:PRK15218    6 ALCLACAAMPAwSGIYIYGTRIIYPAQKKDITVQLMNDGKR-SSLIQAWID--NGDTSlppeklqVPFIMTPPVIRVAAN 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  81 GENTLRIMYVGKKLPQDRESVFWINVKAIPAVEREAvQGKNVLQLAVLSRIKLFVRPAGLPTSPADAPAKLTFNKTGGQL 160
Cdd:PRK15218   83 SGQQLKIKKLANNLPGDRESLFYLNVLDIPPNSDEN-KDKNIIKFALQNRIKLIYRPPGVQKVDKATFSRLQLLRAPGSI 161

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 2293748519 161 IIDNPTPYYITLVNFTIGTH-NLPNTMVAPQSNSGIAIPTG 200
Cdd:PRK15218  162 SVKNNSANWITIPEIKAKSKvNKETLLLAPWSSQSITTTVV 202
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 6-216 1.37e-22

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 92.15  E-value: 1.37e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519   6 LFGALAVSASGVQAGGIALGATRVVYPADAKQTSLAVTNSDKHLRFLIQSWIETTNGEKTTD-FIMTPPLFVSKPQGENT 84
Cdd:PRK15274   12 LIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRyFTALPPLQRIEPKSDGQ 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  85 LRI--MYVGKKLPQDRESVFWINVKAIPAVEREAvqgkNVLQLAVLSRIKLFVRPAGLP-----TSPADapAKLTFNKTG 157
Cdd:PRK15274   92 VKVqpLPAAASLPQDRESLFYFNVREIPPKSDKP----NTLQLALQTRIKFFYRPVAVArqvdkTHPWQ--TKLTLTYQG 165

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2293748519 158 GQLIIDNPTPYYITLVNFTIGTHN----LPNTMVAPQSNSGIAIPTGAAG--PIkYQTINDYGAN 216
Cdd:PRK15274  166 DGVIFDNPTPFYLVISNAGSKENEtasgFKNLLIAPREKVTSPIKGASLGssPV-VGYVDDYGGH 229
PRK15233 PRK15233
fimbrial chaperone SefB;
21-215 5.42e-22

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 90.55  E-value: 5.42e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  21 GIALGATRVVYPADAKQTSLAVTNsDKHLRFLIQSWIETTNGEKTTDFIMTPPLFVSKPQGENTLRIMYVGKKLPQDRES 100
Cdd:PRK15233   41 GLRLGTTRVIYKEDAPSTSFWIMN-EKEYPILVQTQVYNDDKSSKAPFIVTPPILKVESNARTRLKVIPTSNLFNKNEES 119

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519 101 VFWINVKAIPAVEREAVQGKNVL------QLAVLSRIKLFVRPAGLPTSPADAPAKLTFNKTGGQLIIDNPTPYYITLVN 174
Cdd:PRK15233  120 LYWLCVKGVPPLNDNESNNKNNIttnlnvNVVTNSCIKLIYRPKTIDLTTMEIADKLKLERKGNSIVIKNPTSSYVNIAN 199

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 2293748519 175 FTIG--THNLPNTMVAPQSNSgiAIPTGAAGPIKYQTINDYGA 215
Cdd:PRK15233  200 IKSGnlSFNIPNGYIEPFGYA--QLPGGVHSKITLTILDDNGA 240
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 162-218 2.51e-10

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 54.58  E-value: 2.51e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2293748519 162 IDNPTPYYITLVNFTIG----THNLPNTMVAPQSNSGIAIPTGAAGP--IKYQTINDYGANTP 218
Cdd:pfam02753   1 VKNPTPYYVTFSSLSLGgggkELALDPGMVAPFSSQTFAGLPAPAAGgtVSYTYINDYGGIVP 63
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 3-221 3.25e-10

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 58.13  E-value: 3.25e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519   3 LTLLFGALAVSASGVQAGGIALGATRVVYPADAKQTSLAVTNSDKHLRFLIQSwIETTNGEKTTDFIMTPPlfVSKPQGE 82
Cdd:PRK09918    7 FLFTALVLLSSSSAVHAAGMVPETSVVIVEESDGEGSINVKNTDSNPILLYTT-LVDLPEDKSKLLLVTPP--VARVEPG 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2293748519  83 NTLRIMYV-GKKLPQDRESVFWINVKAIPAVEReavqGKNVLQLAVLSRIKLFVRPAGLPTSpaDAPAK-LTFNKTGGQL 160
Cdd:PRK09918   84 QSQQVRFIlKSGSPLNTEHLLRVSFEGVPPKPG----GKNKVVMPIRQDLPVLIQPAALPVV--RDPWKlLVWSISGNNL 157

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2293748519 161 IIDNPTPYYITL---VNF--TIGTHNLPNTMVAPQSNSGIAIPTGAAGP--IKYQTINDYGANTPSIT 221
Cdd:PRK09918  158 VVSNPSPYVVRLgqqVILlpSGKVVALPKPYILPGESLTVAITNSKATDtkVRFFPASRYGFVVPSYT 225
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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