|
Name |
Accession |
Description |
Interval |
E-value |
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
33-402 |
3.03e-54 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 184.72 E-value: 3.03e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 33 DVVILGagfaglaAGMV-------LAREGRSVAAFDAMHPGEGASSRNGGVtsgtIRPDFATMSKHfgEERALAVEyegk 105
Cdd:COG0665 4 DVVVIG-------GGIAglstayhLARRGLDVTVLERGRPGSGASGRNAGQ----LRPGLAALADR--ALVRLARE---- 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 106 aAREFLYEFIRTEGLDCDFKLVGHFKGALGYNQYDKMARSADRLAKlLAVDSYAVPHASQRD---YIGTDFYRGGTVRMD 182
Cdd:COG0665 67 -ALDLWRELAAELGIDCDFRRTGVLYLARTEAELAALRAEAEALRA-LGLPVELLDAAELRErepGLGSPDYAGGLYDPD 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 183 IGGLHPAKLHAELLRVALASGLTVHANTPVTAITREGDGFR-VTTPAGVVQARQVLVCTNGYTDGAVPYLRRRL--VPVR 259
Cdd:COG0665 145 DGHVDPAKLVRALARAARAAGVRIREGTPVTGLEREGGRVTgVRTERGTVRADAVVLAAGAWSARLLPMLGLRLplRPVR 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 260 ARIIATEVLAPelmarlMPKLMMMGESRhlgFYYRPSPDGtRILLGGRDSSRQGDPAAPTLR---LRAGLAEIFPELEAV 336
Cdd:COG0665 225 GYVLVTEPLPD------LPLRPVLDDTG---VYLRPTADG-RLLVGGTAEPAGFDRAPTPERleaLLRRLRRLFPALADA 294
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2305885448 337 RLAHSWYGNVAMNRDMIPRIFE---KDGLVYASGFCGSGVVWAPWVGMRAAYKLMGRaeqaRSAFDFRP 402
Cdd:COG0665 295 EIVRAWAGLRPMTPDGLPIIGRlpgAPGLYVATGHGGHGVTLAPAAGRLLADLILGG----EPPLDLAP 359
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
50-385 |
4.75e-39 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 143.69 E-value: 4.75e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 50 LAREGRSVAAFDA-MHPGEGASSRNGGVtsgtIRPdfatmskHFGEERALAVEYEGKAAREFLYEFIRTEGLDCDFKLVG 128
Cdd:pfam01266 18 LARRGLSVTLLERgDDPGSGASGRNAGL----IHP-------GLRYLEPSELARLALEALDLWEELEEELGIDCGFRRCG 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 129 HFKGALGyNQYDKMARSADRLAKLLAVDSYAVPHASQRDYIGTDFYRGGTVRMDIGGLHPAKLHAELLRVALASGLTVHA 208
Cdd:pfam01266 87 VLVLARD-EEEEALEKLLAALRRLGVPAELLDAEELRELEPLLPGLRGGLFYPDGGHVDPARLLRALARAAEALGVRIIE 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 209 NTPVTAITREGDGFRVTTPAgvvQARQVLVCTNGYTD-GAVPYLRRRLVPVRARIIATEVLAPELMARLMPKLMMMGesr 287
Cdd:pfam01266 166 GTEVTGIEEEGGVWGVVTTG---EADAVVNAAGAWADlLALPGLRLPVRPVRGQVLVLEPLPEALLILPVPITVDPG--- 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 288 hLGFYYRPSPDGtRILLGGRDSSRQGDPAAPTL----RLRAGLAEIFPELeaVRLAHSWYGNVAMnRDMIPRI--FEKDG 361
Cdd:pfam01266 240 -RGVYLRPRADG-RLLLGGTDEEDGFDDPTPDPeeieELLEAARRLFPAL--ADIERAWAGLRPL-PDGLPIIgrPGSPG 314
|
330 340
....*....|....*....|....
gi 2305885448 362 LVYASGFCGSGVVWAPWVGMRAAY 385
Cdd:pfam01266 315 LYLATGHGGHGLTLAPGIGKLLAE 338
|
|
| solA |
PRK11259 |
N-methyl-L-tryptophan oxidase; |
196-259 |
5.97e-12 |
|
N-methyl-L-tryptophan oxidase;
Pssm-ID: 236887 [Multi-domain] Cd Length: 376 Bit Score: 66.78 E-value: 5.97e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2305885448 196 LRVALASGLTVHANTPVTAITREGDGFRVTTPAGVVQARQVLVCTNGYTDGAVPYLRRRLVPVR 259
Cdd:PRK11259 156 LRLAREAGAELLFNEPVTAIEADGDGVTVTTADGTYEAKKLVVSAGAWVKDLLPPLELPLTPVR 219
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
33-402 |
3.03e-54 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 184.72 E-value: 3.03e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 33 DVVILGagfaglaAGMV-------LAREGRSVAAFDAMHPGEGASSRNGGVtsgtIRPDFATMSKHfgEERALAVEyegk 105
Cdd:COG0665 4 DVVVIG-------GGIAglstayhLARRGLDVTVLERGRPGSGASGRNAGQ----LRPGLAALADR--ALVRLARE---- 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 106 aAREFLYEFIRTEGLDCDFKLVGHFKGALGYNQYDKMARSADRLAKlLAVDSYAVPHASQRD---YIGTDFYRGGTVRMD 182
Cdd:COG0665 67 -ALDLWRELAAELGIDCDFRRTGVLYLARTEAELAALRAEAEALRA-LGLPVELLDAAELRErepGLGSPDYAGGLYDPD 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 183 IGGLHPAKLHAELLRVALASGLTVHANTPVTAITREGDGFR-VTTPAGVVQARQVLVCTNGYTDGAVPYLRRRL--VPVR 259
Cdd:COG0665 145 DGHVDPAKLVRALARAARAAGVRIREGTPVTGLEREGGRVTgVRTERGTVRADAVVLAAGAWSARLLPMLGLRLplRPVR 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 260 ARIIATEVLAPelmarlMPKLMMMGESRhlgFYYRPSPDGtRILLGGRDSSRQGDPAAPTLR---LRAGLAEIFPELEAV 336
Cdd:COG0665 225 GYVLVTEPLPD------LPLRPVLDDTG---VYLRPTADG-RLLVGGTAEPAGFDRAPTPERleaLLRRLRRLFPALADA 294
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2305885448 337 RLAHSWYGNVAMNRDMIPRIFE---KDGLVYASGFCGSGVVWAPWVGMRAAYKLMGRaeqaRSAFDFRP 402
Cdd:COG0665 295 EIVRAWAGLRPMTPDGLPIIGRlpgAPGLYVATGHGGHGVTLAPAAGRLLADLILGG----EPPLDLAP 359
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
50-385 |
4.75e-39 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 143.69 E-value: 4.75e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 50 LAREGRSVAAFDA-MHPGEGASSRNGGVtsgtIRPdfatmskHFGEERALAVEYEGKAAREFLYEFIRTEGLDCDFKLVG 128
Cdd:pfam01266 18 LARRGLSVTLLERgDDPGSGASGRNAGL----IHP-------GLRYLEPSELARLALEALDLWEELEEELGIDCGFRRCG 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 129 HFKGALGyNQYDKMARSADRLAKLLAVDSYAVPHASQRDYIGTDFYRGGTVRMDIGGLHPAKLHAELLRVALASGLTVHA 208
Cdd:pfam01266 87 VLVLARD-EEEEALEKLLAALRRLGVPAELLDAEELRELEPLLPGLRGGLFYPDGGHVDPARLLRALARAAEALGVRIIE 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 209 NTPVTAITREGDGFRVTTPAgvvQARQVLVCTNGYTD-GAVPYLRRRLVPVRARIIATEVLAPELMARLMPKLMMMGesr 287
Cdd:pfam01266 166 GTEVTGIEEEGGVWGVVTTG---EADAVVNAAGAWADlLALPGLRLPVRPVRGQVLVLEPLPEALLILPVPITVDPG--- 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 288 hLGFYYRPSPDGtRILLGGRDSSRQGDPAAPTL----RLRAGLAEIFPELeaVRLAHSWYGNVAMnRDMIPRI--FEKDG 361
Cdd:pfam01266 240 -RGVYLRPRADG-RLLLGGTDEEDGFDDPTPDPeeieELLEAARRLFPAL--ADIERAWAGLRPL-PDGLPIIgrPGSPG 314
|
330 340
....*....|....*....|....
gi 2305885448 362 LVYASGFCGSGVVWAPWVGMRAAY 385
Cdd:pfam01266 315 LYLATGHGGHGLTLAPGIGKLLAE 338
|
|
| solA |
PRK11259 |
N-methyl-L-tryptophan oxidase; |
196-259 |
5.97e-12 |
|
N-methyl-L-tryptophan oxidase;
Pssm-ID: 236887 [Multi-domain] Cd Length: 376 Bit Score: 66.78 E-value: 5.97e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2305885448 196 LRVALASGLTVHANTPVTAITREGDGFRVTTPAGVVQARQVLVCTNGYTDGAVPYLRRRLVPVR 259
Cdd:PRK11259 156 LRLAREAGAELLFNEPVTAIEADGDGVTVTTADGTYEAKKLVVSAGAWVKDLLPPLELPLTPVR 219
|
|
| LhgO |
COG0579 |
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism]; |
50-245 |
2.70e-08 |
|
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
Pssm-ID: 440344 [Multi-domain] Cd Length: 418 Bit Score: 55.54 E-value: 2.70e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 50 LARE-----GRSVAAFDAM-HPGEGASSRNGGV-------TSGTIRPDFAtmskhfgeeralaveyegKAAREFLYEFIR 116
Cdd:COG0579 19 LARElsryeDLKVLVLEKEdDVAQESSGNNSGVihaglyyTPGSLKARLC------------------VEGNELFYELCR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 117 TEGLDcdFKLVGHFKGALGYNQYDKMAR----------------SADRLAKLlavdsyaVPHASQRDYIGTDFYRGGTVr 180
Cdd:COG0579 81 ELGIP--FKRCGKLVVATGEEEVAFLEKlyergkangvpgleilDREELREL-------EPLLSDEGVAALYSPSTGIV- 150
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2305885448 181 mDigglhPAKLHAELLRVALASGLTVHANTPVTAITREGDGFRVTTPAGVVQARQVLVCTNGYTD 245
Cdd:COG0579 151 -D-----PGALTRALAENAEANGVELLLNTEVTGIEREGDGWEVTTNGGTIRARFVINAAGLYAD 209
|
|
| Pyr_redox_3 |
pfam13738 |
Pyridine nucleotide-disulphide oxidoreductase; |
197-245 |
7.98e-07 |
|
Pyridine nucleotide-disulphide oxidoreductase;
Pssm-ID: 404603 [Multi-domain] Cd Length: 296 Bit Score: 50.30 E-value: 7.98e-07
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 2305885448 197 RVALASGLTVHANTPVTAITREGDGFRVTTPAGVVQARQVLVCTnGYTD 245
Cdd:pfam13738 83 RVADHFELPINLFEEVTSVKKEDDGFVVTTSKGTYQARYVIIAT-GEFD 130
|
|
| mnmC |
PRK01747 |
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ... |
134-336 |
1.52e-05 |
|
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;
Pssm-ID: 234978 [Multi-domain] Cd Length: 662 Bit Score: 47.15 E-value: 1.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 134 LGYNqyDKMARSADRLAKLLAVDSYA--VPHASQRDYIGTDFYRGGTVRMDIGGLHPAKLHAELLRvALASGLTVHANTP 211
Cdd:PRK01747 353 LAWD--EKSAEKIAKMLALGLPAELAraLDAEEAEELAGLPVPCGGIFYPQGGWLCPAELCRALLA-LAGQQLTIHFGHE 429
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 212 VTAITREGDGFRVTTPAGVVQARQVLVCTNGYTDGAVPYLRR-RLVPVR---ARIIATEVLAPelmarLMPKLMMMGesr 287
Cdd:PRK01747 430 VARLEREDDGWQLDFAGGTLASAPVVVLANGHDAARFAQTAHlPLYSVRgqvSHLPTTPALSA-----LKQVLCYDG--- 501
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2305885448 288 hlgfYYRPSPDGTRILLGgrdSSRQGDPAAPTLRL------RAGLAEIFPELEAV 336
Cdd:PRK01747 502 ----YLTPQPANGTHCIG---ASYDRDDTDTAFREadhqenLERLAECLPQALWA 549
|
|
| Amino_oxidase |
pfam01593 |
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ... |
172-263 |
5.41e-05 |
|
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.
Pssm-ID: 396255 [Multi-domain] Cd Length: 446 Bit Score: 45.17 E-value: 5.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 172 DFYRGGTVRMDIGGLH--PAKLHAELLrvalasGLTVHANTPVTAITREGDGFRVTTPAG-VVQARQVLVCTNGYTDgAV 248
Cdd:pfam01593 191 LLGEGGSLLLPRGGLGalPDALAAQLL------GGDVRLNTRVRSIDREGDGVTVTLTDGeVIEADAVIVTVPLGVL-KR 263
|
90
....*....|....*
gi 2305885448 249 PYLRRRLVPVRARII 263
Cdd:pfam01593 264 ILFTPPLPPEKARAI 278
|
|
| PRK11728 |
PRK11728 |
L-2-hydroxyglutarate oxidase; |
193-245 |
3.75e-04 |
|
L-2-hydroxyglutarate oxidase;
Pssm-ID: 183292 [Multi-domain] Cd Length: 393 Bit Score: 42.50 E-value: 3.75e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 2305885448 193 AELLRvalASGLTVHANTPVTAITREGDGFRVTTPAGVVQARQVLVCTNGYTD 245
Cdd:PRK11728 156 AELIQ---ARGGEIRLGAEVTALDEHANGVVVRTTQGEYEARTLINCAGLMSD 205
|
|
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
199-239 |
1.93e-03 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 40.29 E-value: 1.93e-03
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 2305885448 199 ALASGL--TVHANTPVTAITREGDGFRVTTPAG-VVQARQVLVC 239
Cdd:COG1231 207 ALAAELgdRIRLGAPVTRIRQDGDGVTVTTDDGgTVRADAVIVT 250
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
189-255 |
6.49e-03 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 38.41 E-value: 6.49e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2305885448 189 AKLHAELLRVALASGLTVHANTPVTAITREGDGFRVTTPAG-VVQARQVLVCtngytDGAVPYLRRRL 255
Cdd:COG0644 86 ARFDRWLAEQAEEAGAEVRTGTRVTDVLRDDGRVVVRTGDGeEIRADYVVDA-----DGARSLLARKL 148
|
|
|