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Conserved domains on  [gi|2305885448|ref|WP_260692190|]
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FAD-binding oxidoreductase [Gemmobacter fulva]

Protein Classification

NAD(P)/FAD-dependent oxidoreductase( domain architecture ID 11429741)

FAD/NAD(P)-binding oxidoreductase that catalyzes the transfer of electrons from one molecule, the electron donor or reductant, to another molecule, the electron acceptor or oxidant

CATH:  3.30.9.10
EC:  1.-.-.-
Gene Ontology:  GO:0016491|GO:0050660
SCOP:  3000055

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
33-402 3.03e-54

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


:

Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 184.72  E-value: 3.03e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448  33 DVVILGagfaglaAGMV-------LAREGRSVAAFDAMHPGEGASSRNGGVtsgtIRPDFATMSKHfgEERALAVEyegk 105
Cdd:COG0665     4 DVVVIG-------GGIAglstayhLARRGLDVTVLERGRPGSGASGRNAGQ----LRPGLAALADR--ALVRLARE---- 66

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 106 aAREFLYEFIRTEGLDCDFKLVGHFKGALGYNQYDKMARSADRLAKlLAVDSYAVPHASQRD---YIGTDFYRGGTVRMD 182
Cdd:COG0665    67 -ALDLWRELAAELGIDCDFRRTGVLYLARTEAELAALRAEAEALRA-LGLPVELLDAAELRErepGLGSPDYAGGLYDPD 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 183 IGGLHPAKLHAELLRVALASGLTVHANTPVTAITREGDGFR-VTTPAGVVQARQVLVCTNGYTDGAVPYLRRRL--VPVR 259
Cdd:COG0665   145 DGHVDPAKLVRALARAARAAGVRIREGTPVTGLEREGGRVTgVRTERGTVRADAVVLAAGAWSARLLPMLGLRLplRPVR 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 260 ARIIATEVLAPelmarlMPKLMMMGESRhlgFYYRPSPDGtRILLGGRDSSRQGDPAAPTLR---LRAGLAEIFPELEAV 336
Cdd:COG0665   225 GYVLVTEPLPD------LPLRPVLDDTG---VYLRPTADG-RLLVGGTAEPAGFDRAPTPERleaLLRRLRRLFPALADA 294

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2305885448 337 RLAHSWYGNVAMNRDMIPRIFE---KDGLVYASGFCGSGVVWAPWVGMRAAYKLMGRaeqaRSAFDFRP 402
Cdd:COG0665   295 EIVRAWAGLRPMTPDGLPIIGRlpgAPGLYVATGHGGHGVTLAPAAGRLLADLILGG----EPPLDLAP 359
 
Name Accession Description Interval E-value
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
33-402 3.03e-54

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 184.72  E-value: 3.03e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448  33 DVVILGagfaglaAGMV-------LAREGRSVAAFDAMHPGEGASSRNGGVtsgtIRPDFATMSKHfgEERALAVEyegk 105
Cdd:COG0665     4 DVVVIG-------GGIAglstayhLARRGLDVTVLERGRPGSGASGRNAGQ----LRPGLAALADR--ALVRLARE---- 66

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 106 aAREFLYEFIRTEGLDCDFKLVGHFKGALGYNQYDKMARSADRLAKlLAVDSYAVPHASQRD---YIGTDFYRGGTVRMD 182
Cdd:COG0665    67 -ALDLWRELAAELGIDCDFRRTGVLYLARTEAELAALRAEAEALRA-LGLPVELLDAAELRErepGLGSPDYAGGLYDPD 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 183 IGGLHPAKLHAELLRVALASGLTVHANTPVTAITREGDGFR-VTTPAGVVQARQVLVCTNGYTDGAVPYLRRRL--VPVR 259
Cdd:COG0665   145 DGHVDPAKLVRALARAARAAGVRIREGTPVTGLEREGGRVTgVRTERGTVRADAVVLAAGAWSARLLPMLGLRLplRPVR 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 260 ARIIATEVLAPelmarlMPKLMMMGESRhlgFYYRPSPDGtRILLGGRDSSRQGDPAAPTLR---LRAGLAEIFPELEAV 336
Cdd:COG0665   225 GYVLVTEPLPD------LPLRPVLDDTG---VYLRPTADG-RLLVGGTAEPAGFDRAPTPERleaLLRRLRRLFPALADA 294

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2305885448 337 RLAHSWYGNVAMNRDMIPRIFE---KDGLVYASGFCGSGVVWAPWVGMRAAYKLMGRaeqaRSAFDFRP 402
Cdd:COG0665   295 EIVRAWAGLRPMTPDGLPIIGRlpgAPGLYVATGHGGHGVTLAPAAGRLLADLILGG----EPPLDLAP 359
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 50-385 4.75e-39

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 143.69  E-value: 4.75e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448  50 LAREGRSVAAFDA-MHPGEGASSRNGGVtsgtIRPdfatmskHFGEERALAVEYEGKAAREFLYEFIRTEGLDCDFKLVG 128
Cdd:pfam01266  18 LARRGLSVTLLERgDDPGSGASGRNAGL----IHP-------GLRYLEPSELARLALEALDLWEELEEELGIDCGFRRCG 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 129 HFKGALGyNQYDKMARSADRLAKLLAVDSYAVPHASQRDYIGTDFYRGGTVRMDIGGLHPAKLHAELLRVALASGLTVHA 208
Cdd:pfam01266  87 VLVLARD-EEEEALEKLLAALRRLGVPAELLDAEELRELEPLLPGLRGGLFYPDGGHVDPARLLRALARAAEALGVRIIE 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 209 NTPVTAITREGDGFRVTTPAgvvQARQVLVCTNGYTD-GAVPYLRRRLVPVRARIIATEVLAPELMARLMPKLMMMGesr 287
Cdd:pfam01266 166 GTEVTGIEEEGGVWGVVTTG---EADAVVNAAGAWADlLALPGLRLPVRPVRGQVLVLEPLPEALLILPVPITVDPG--- 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 288 hLGFYYRPSPDGtRILLGGRDSSRQGDPAAPTL----RLRAGLAEIFPELeaVRLAHSWYGNVAMnRDMIPRI--FEKDG 361
Cdd:pfam01266 240 -RGVYLRPRADG-RLLLGGTDEEDGFDDPTPDPeeieELLEAARRLFPAL--ADIERAWAGLRPL-PDGLPIIgrPGSPG 314

                         330       340
                  ....*....|....*....|....
gi 2305885448 362 LVYASGFCGSGVVWAPWVGMRAAY 385
Cdd:pfam01266 315 LYLATGHGGHGLTLAPGIGKLLAE 338
solA PRK11259
N-methyl-L-tryptophan oxidase;
196-259 5.97e-12

N-methyl-L-tryptophan oxidase;


Pssm-ID: 236887 [Multi-domain]  Cd Length: 376  Bit Score: 66.78  E-value: 5.97e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2305885448 196 LRVALASGLTVHANTPVTAITREGDGFRVTTPAGVVQARQVLVCTNGYTDGAVPYLRRRLVPVR 259
Cdd:PRK11259  156 LRLAREAGAELLFNEPVTAIEADGDGVTVTTADGTYEAKKLVVSAGAWVKDLLPPLELPLTPVR 219
 
Name Accession Description Interval E-value
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
33-402 3.03e-54

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 184.72  E-value: 3.03e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448  33 DVVILGagfaglaAGMV-------LAREGRSVAAFDAMHPGEGASSRNGGVtsgtIRPDFATMSKHfgEERALAVEyegk 105
Cdd:COG0665     4 DVVVIG-------GGIAglstayhLARRGLDVTVLERGRPGSGASGRNAGQ----LRPGLAALADR--ALVRLARE---- 66

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 106 aAREFLYEFIRTEGLDCDFKLVGHFKGALGYNQYDKMARSADRLAKlLAVDSYAVPHASQRD---YIGTDFYRGGTVRMD 182
Cdd:COG0665    67 -ALDLWRELAAELGIDCDFRRTGVLYLARTEAELAALRAEAEALRA-LGLPVELLDAAELRErepGLGSPDYAGGLYDPD 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 183 IGGLHPAKLHAELLRVALASGLTVHANTPVTAITREGDGFR-VTTPAGVVQARQVLVCTNGYTDGAVPYLRRRL--VPVR 259
Cdd:COG0665   145 DGHVDPAKLVRALARAARAAGVRIREGTPVTGLEREGGRVTgVRTERGTVRADAVVLAAGAWSARLLPMLGLRLplRPVR 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 260 ARIIATEVLAPelmarlMPKLMMMGESRhlgFYYRPSPDGtRILLGGRDSSRQGDPAAPTLR---LRAGLAEIFPELEAV 336
Cdd:COG0665   225 GYVLVTEPLPD------LPLRPVLDDTG---VYLRPTADG-RLLVGGTAEPAGFDRAPTPERleaLLRRLRRLFPALADA 294

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2305885448 337 RLAHSWYGNVAMNRDMIPRIFE---KDGLVYASGFCGSGVVWAPWVGMRAAYKLMGRaeqaRSAFDFRP 402
Cdd:COG0665   295 EIVRAWAGLRPMTPDGLPIIGRlpgAPGLYVATGHGGHGVTLAPAAGRLLADLILGG----EPPLDLAP 359
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 50-385 4.75e-39

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 143.69  E-value: 4.75e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448  50 LAREGRSVAAFDA-MHPGEGASSRNGGVtsgtIRPdfatmskHFGEERALAVEYEGKAAREFLYEFIRTEGLDCDFKLVG 128
Cdd:pfam01266  18 LARRGLSVTLLERgDDPGSGASGRNAGL----IHP-------GLRYLEPSELARLALEALDLWEELEEELGIDCGFRRCG 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 129 HFKGALGyNQYDKMARSADRLAKLLAVDSYAVPHASQRDYIGTDFYRGGTVRMDIGGLHPAKLHAELLRVALASGLTVHA 208
Cdd:pfam01266  87 VLVLARD-EEEEALEKLLAALRRLGVPAELLDAEELRELEPLLPGLRGGLFYPDGGHVDPARLLRALARAAEALGVRIIE 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 209 NTPVTAITREGDGFRVTTPAgvvQARQVLVCTNGYTD-GAVPYLRRRLVPVRARIIATEVLAPELMARLMPKLMMMGesr 287
Cdd:pfam01266 166 GTEVTGIEEEGGVWGVVTTG---EADAVVNAAGAWADlLALPGLRLPVRPVRGQVLVLEPLPEALLILPVPITVDPG--- 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 288 hLGFYYRPSPDGtRILLGGRDSSRQGDPAAPTL----RLRAGLAEIFPELeaVRLAHSWYGNVAMnRDMIPRI--FEKDG 361
Cdd:pfam01266 240 -RGVYLRPRADG-RLLLGGTDEEDGFDDPTPDPeeieELLEAARRLFPAL--ADIERAWAGLRPL-PDGLPIIgrPGSPG 314

                         330       340
                  ....*....|....*....|....
gi 2305885448 362 LVYASGFCGSGVVWAPWVGMRAAY 385
Cdd:pfam01266 315 LYLATGHGGHGLTLAPGIGKLLAE 338
solA PRK11259
N-methyl-L-tryptophan oxidase;
196-259 5.97e-12

N-methyl-L-tryptophan oxidase;


Pssm-ID: 236887 [Multi-domain]  Cd Length: 376  Bit Score: 66.78  E-value: 5.97e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2305885448 196 LRVALASGLTVHANTPVTAITREGDGFRVTTPAGVVQARQVLVCTNGYTDGAVPYLRRRLVPVR 259
Cdd:PRK11259  156 LRLAREAGAELLFNEPVTAIEADGDGVTVTTADGTYEAKKLVVSAGAWVKDLLPPLELPLTPVR 219
LhgO COG0579
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
50-245 2.70e-08

L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];


Pssm-ID: 440344 [Multi-domain]  Cd Length: 418  Bit Score: 55.54  E-value: 2.70e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448  50 LARE-----GRSVAAFDAM-HPGEGASSRNGGV-------TSGTIRPDFAtmskhfgeeralaveyegKAAREFLYEFIR 116
Cdd:COG0579    19 LARElsryeDLKVLVLEKEdDVAQESSGNNSGVihaglyyTPGSLKARLC------------------VEGNELFYELCR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 117 TEGLDcdFKLVGHFKGALGYNQYDKMAR----------------SADRLAKLlavdsyaVPHASQRDYIGTDFYRGGTVr 180
Cdd:COG0579    81 ELGIP--FKRCGKLVVATGEEEVAFLEKlyergkangvpgleilDREELREL-------EPLLSDEGVAALYSPSTGIV- 150

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2305885448 181 mDigglhPAKLHAELLRVALASGLTVHANTPVTAITREGDGFRVTTPAGVVQARQVLVCTNGYTD 245
Cdd:COG0579   151 -D-----PGALTRALAENAEANGVELLLNTEVTGIEREGDGWEVTTNGGTIRARFVINAAGLYAD 209
Pyr_redox_3 pfam13738
Pyridine nucleotide-disulphide oxidoreductase;
197-245 7.98e-07

Pyridine nucleotide-disulphide oxidoreductase;


Pssm-ID: 404603 [Multi-domain]  Cd Length: 296  Bit Score: 50.30  E-value: 7.98e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 2305885448 197 RVALASGLTVHANTPVTAITREGDGFRVTTPAGVVQARQVLVCTnGYTD 245
Cdd:pfam13738  83 RVADHFELPINLFEEVTSVKKEDDGFVVTTSKGTYQARYVIIAT-GEFD 130
mnmC PRK01747
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ...
 134-336 1.52e-05

bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;


Pssm-ID: 234978 [Multi-domain]  Cd Length: 662  Bit Score: 47.15  E-value: 1.52e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 134 LGYNqyDKMARSADRLAKLLAVDSYA--VPHASQRDYIGTDFYRGGTVRMDIGGLHPAKLHAELLRvALASGLTVHANTP 211
Cdd:PRK01747  353 LAWD--EKSAEKIAKMLALGLPAELAraLDAEEAEELAGLPVPCGGIFYPQGGWLCPAELCRALLA-LAGQQLTIHFGHE 429

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 212 VTAITREGDGFRVTTPAGVVQARQVLVCTNGYTDGAVPYLRR-RLVPVR---ARIIATEVLAPelmarLMPKLMMMGesr 287
Cdd:PRK01747  430 VARLEREDDGWQLDFAGGTLASAPVVVLANGHDAARFAQTAHlPLYSVRgqvSHLPTTPALSA-----LKQVLCYDG--- 501

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2305885448 288 hlgfYYRPSPDGTRILLGgrdSSRQGDPAAPTLRL------RAGLAEIFPELEAV 336
Cdd:PRK01747  502 ----YLTPQPANGTHCIG---ASYDRDDTDTAFREadhqenLERLAECLPQALWA 549
Amino_oxidase pfam01593
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ...
 172-263 5.41e-05

Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.


Pssm-ID: 396255 [Multi-domain]  Cd Length: 446  Bit Score: 45.17  E-value: 5.41e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2305885448 172 DFYRGGTVRMDIGGLH--PAKLHAELLrvalasGLTVHANTPVTAITREGDGFRVTTPAG-VVQARQVLVCTNGYTDgAV 248
Cdd:pfam01593 191 LLGEGGSLLLPRGGLGalPDALAAQLL------GGDVRLNTRVRSIDREGDGVTVTLTDGeVIEADAVIVTVPLGVL-KR 263

                          90
                  ....*....|....*
gi 2305885448 249 PYLRRRLVPVRARII 263
Cdd:pfam01593 264 ILFTPPLPPEKARAI 278
PRK11728 PRK11728
L-2-hydroxyglutarate oxidase;
193-245 3.75e-04

L-2-hydroxyglutarate oxidase;


Pssm-ID: 183292 [Multi-domain]  Cd Length: 393  Bit Score: 42.50  E-value: 3.75e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2305885448 193 AELLRvalASGLTVHANTPVTAITREGDGFRVTTPAGVVQARQVLVCTNGYTD 245
Cdd:PRK11728  156 AELIQ---ARGGEIRLGAEVTALDEHANGVVVRTTQGEYEARTLINCAGLMSD 205
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
199-239 1.93e-03

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 40.29  E-value: 1.93e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 2305885448 199 ALASGL--TVHANTPVTAITREGDGFRVTTPAG-VVQARQVLVC 239
Cdd:COG1231   207 ALAAELgdRIRLGAPVTRIRQDGDGVTVTTDDGgTVRADAVIVT 250
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
189-255 6.49e-03

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 38.41  E-value: 6.49e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2305885448 189 AKLHAELLRVALASGLTVHANTPVTAITREGDGFRVTTPAG-VVQARQVLVCtngytDGAVPYLRRRL 255
Cdd:COG0644    86 ARFDRWLAEQAEEAGAEVRTGTRVTDVLRDDGRVVVRTGDGeEIRADYVVDA-----DGARSLLARKL 148
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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