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Conserved domains on  [gi|2311287113|ref|WP_261971011|]
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FAD-dependent oxidoreductase [Prosthecodimorpha staleyi]

Protein Classification

NAD(P)/FAD-dependent oxidoreductase( domain architecture ID 1000380)

NAD(P)/FAD-dependent oxidoreductase catalyzes the transfer of electrons from one molecule, the electron donor or reductant, to another molecule, the electron acceptor or oxidant

CATH:  3.50.50.60
EC:  1.-.-.-
Gene Ontology:  GO:0016491
SCOP:  4000117

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CzcO super family cl34398
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 5-398 3.49e-22

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


The actual alignment was detected with superfamily member COG2072:

Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 98.40  E-value: 3.49e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113   5 RDLPVAVIGAGPVGLAAAAHLVERGIRPLVFEKGRSVGaavAAWSH-----VRVFTPWSLNvdaaaarllAATGWPAPDP 79
Cdd:COG2072     5 EHVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVG---GTWRDnrypgLRLDTPSHLY---------SLPFFPNWSD 72

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113  80 DET-PTGAAIvRRYLEPLARVEAIAAGLHLGATVMGVTRKgfdkmtspgRDAAPFVLHWRDaaGRTHctEARSIIDASGV 158
Cdd:COG2072    73 DPDfPTGDEI-LAYLEAYADKFGLRRPIRFGTEVTSARWD---------EADGRWTVTTDD--GETL--TARFVVVATGP 138

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 159 WSSPNpmgvdgMP-VPGEQDATVAAAIASGIPDVLEaerghYAGRRVLVVGAGHSAINVVLDllrLQAEAPETRVV---- 233
Cdd:COG2072   139 LSRPK------IPdIPGLEDFAGEQLHSADWRNPVD-----LAGKRVLVVGTGASAVQIAPE---LARVAAHVTVFqrtp 204

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 234 -WALRRERLDLIAGGGLDDKLAERGALGLAAKAAIEARR----------LELLAP------------------FAAEWIQ 284
Cdd:COG2072   205 pWVLPRPNYDPERGRPANYLGLEAPPALNRRDARAWLRRllraqvkdpeLGLLTPdyppgckrpllstdyyeaLRRGNVE 284

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 285 ARPDGV-RIEAR--HGERSVTLDVDRIVVATGFRPDLRLLAELRVALDPAVEAPPALAplidpnlhscGTVPPhgaaela 361
Cdd:COG2072   285 LVTGGIeRITEDgvVFADGTEHEVDVIVWATGFRADLPWLAPLDVRGRDGRSGPRAYL----------GVVVP------- 347

                         410       420       430
                  ....*....|....*....|....*....|....*...
gi 2311287113 362 qPEPGLYIVG-AKSYGRAPTFLMATgyEQVRSVVAAIA 398
Cdd:COG2072   348 -GFPNLFFLGpNSPSGHSSLTLGAE--RQARYIARLIA 382
 
Name Accession Description Interval E-value
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 5-398 3.49e-22

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 98.40  E-value: 3.49e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113   5 RDLPVAVIGAGPVGLAAAAHLVERGIRPLVFEKGRSVGaavAAWSH-----VRVFTPWSLNvdaaaarllAATGWPAPDP 79
Cdd:COG2072     5 EHVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVG---GTWRDnrypgLRLDTPSHLY---------SLPFFPNWSD 72

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113  80 DET-PTGAAIvRRYLEPLARVEAIAAGLHLGATVMGVTRKgfdkmtspgRDAAPFVLHWRDaaGRTHctEARSIIDASGV 158
Cdd:COG2072    73 DPDfPTGDEI-LAYLEAYADKFGLRRPIRFGTEVTSARWD---------EADGRWTVTTDD--GETL--TARFVVVATGP 138

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 159 WSSPNpmgvdgMP-VPGEQDATVAAAIASGIPDVLEaerghYAGRRVLVVGAGHSAINVVLDllrLQAEAPETRVV---- 233
Cdd:COG2072   139 LSRPK------IPdIPGLEDFAGEQLHSADWRNPVD-----LAGKRVLVVGTGASAVQIAPE---LARVAAHVTVFqrtp 204

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 234 -WALRRERLDLIAGGGLDDKLAERGALGLAAKAAIEARR----------LELLAP------------------FAAEWIQ 284
Cdd:COG2072   205 pWVLPRPNYDPERGRPANYLGLEAPPALNRRDARAWLRRllraqvkdpeLGLLTPdyppgckrpllstdyyeaLRRGNVE 284

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 285 ARPDGV-RIEAR--HGERSVTLDVDRIVVATGFRPDLRLLAELRVALDPAVEAPPALAplidpnlhscGTVPPhgaaela 361
Cdd:COG2072   285 LVTGGIeRITEDgvVFADGTEHEVDVIVWATGFRADLPWLAPLDVRGRDGRSGPRAYL----------GVVVP------- 347

                         410       420       430
                  ....*....|....*....|....*....|....*...
gi 2311287113 362 qPEPGLYIVG-AKSYGRAPTFLMATgyEQVRSVVAAIA 398
Cdd:COG2072   348 -GFPNLFFLGpNSPSGHSSLTLGAE--RQARYIARLIA 382
Bthiol_YpdA TIGR04018
putative bacillithiol system oxidoreductase, YpdA family; Members of this protein family, ...
 9-377 7.51e-18

putative bacillithiol system oxidoreductase, YpdA family; Members of this protein family, including YpdA from Bacillus subtilis, are apparent oxidoreductases present only in species with an active bacillithiol system. They have been suggested actually to be thiol disulfide oxidoreductases (TDOR), although the evidence is incomplete. [Unknown function, Enzymes of unknown specificity]


Pssm-ID: 188533 [Multi-domain]  Cd Length: 316  Bit Score: 84.15  E-value: 7.51e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113   9 VAVIGAGPVGLAAAAHLVERGIRPLVFEKGRSVGAAVAAWSHVRVF-TPWSLNVDaaaarllaatGWPAPDPDETPTgaa 87
Cdd:TIGR04018   2 VIIIGAGPCGLACAIEAQKAGLSYLIIEKGNLVNSIYRYPTNMTFFsTSERLEIG----------GIPFISENPKPT--- 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113  88 ivrryleplaRVEAI----AAGLHLGATVmgvtrKGFDKMTSPGRDAAPFVLHwrdaaGRTHCTEARSIIDASGVWSSPN 163
Cdd:TIGR04018  69 ----------RNEALeyyrRVAERFKLNI-----RLYEEVLKVKKTDGGFEVT-----TEKGTYQAKNVIVATGYYDIPN 128

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 164 PMGvdgmpVPGEQdatvaaaiasgIPDVL----EAergH-YAGRRVLVVGAGHSAINVVLDLLRLQAEapetrVVWALRr 238
Cdd:TIGR04018 129 LLN-----VPGED-----------LPKVShyykEA---HpYFGQKVVVVGGSNSAVDAALELYRKGAE-----VTMVHR- 183

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 239 erldliaGGGLDDK-----LAErgalglaakaaIEARRLE--LLAPFAAEWIQARPDGVRIEARHGErSVTLDVDRIVVA 311
Cdd:TIGR04018 184 -------GDEVSSSvkywvRPD-----------IENRIKEgsIKAYFNSRVKEITEDSVTLETPDGE-VHTIPNDFVFAL 244

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2311287113 312 TGFRPDLRLLAELRVALDpaveaPPALAPLIDPNlhscgtvpphgaaELAQPEPGLYIVGAKSYGR 377
Cdd:TIGR04018 245 TGYRPDFEFLESLGVELD-----EDTGIPVYNPE-------------TMETNVPGLYLAGVIAAGM 292
Lys_Orn_oxgnase pfam13434
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase; This is a family of Rossmann fold ...
 106-316 2.67e-09

L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase; This is a family of Rossmann fold oxidoreductases that catalyze NADPH-dependent hydroxylation and are involved in siderophore biosynthesis. This family includes L-ornithine 5-monooxygenase, which catalyzes the hydroxylation of L-ornithine at the N5 position, and L-lysine 6-monooxygenase, which catalyzes the hydroxylation of lysine at the N6 position (EC:1.14.13.59).


Pssm-ID: 433204 [Multi-domain]  Cd Length: 338  Bit Score: 58.75  E-value: 2.67e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 106 LHLGATVMGVTrkgFDkmtsPGRDAAPFVLHWRDAAGRTHCTEARSIIDASGVwsSPNpmgvdgMPVPGEQDATVaaaIA 185
Cdd:pfam13434 112 LRFGQEVESVE---PD----AERGEPLLRVRVRDADGEETTFLARNLVLGTGG--EPY------IPECARGGERV---FH 173

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 186 SGipDVLEAERGHYAGRRVLVVGAGHSAINVVLDLLRlqaEAPETRVVWALRR--------------------------- 238
Cdd:pfam13434 174 SS--EYLERIDRLAAKKRIAVVGSGQSAAEIFRDLLR---RGPAYELTWVTRSpnffplddspfvneifspeyvdyfysl 248

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 239 ---ERLDLIAG------GGLDDKLAERGALGLAAKAAIEARRLELLAPFAAEWIQARPDG-VRIEARHGE--RSVTLDVD 306
Cdd:pfam13434 249 pedTRRALLREqkgtnyDGIDPSLIEEIYRLLYEQRVDGDPRHRLLPNREVQSAERVGDGgVELTLRDGEqgREETLETD 328

                         250
                  ....*....|
gi 2311287113 307 RIVVATGFRP 316
Cdd:pfam13434 329 VVVLATGYRR 338
PRK07233 PRK07233
hypothetical protein; Provisional
 9-48 2.48e-06

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 49.89  E-value: 2.48e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 2311287113   9 VAVIGAGPVGLAAAAHLVERGIRPLVFEKGRSVGAAVAAW 48
Cdd:PRK07233    2 IAIVGGGIAGLAAAYRLAKRGHEVTVFEADDQLGGLAASF 41
 
Name Accession Description Interval E-value
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 5-398 3.49e-22

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 98.40  E-value: 3.49e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113   5 RDLPVAVIGAGPVGLAAAAHLVERGIRPLVFEKGRSVGaavAAWSH-----VRVFTPWSLNvdaaaarllAATGWPAPDP 79
Cdd:COG2072     5 EHVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVG---GTWRDnrypgLRLDTPSHLY---------SLPFFPNWSD 72

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113  80 DET-PTGAAIvRRYLEPLARVEAIAAGLHLGATVMGVTRKgfdkmtspgRDAAPFVLHWRDaaGRTHctEARSIIDASGV 158
Cdd:COG2072    73 DPDfPTGDEI-LAYLEAYADKFGLRRPIRFGTEVTSARWD---------EADGRWTVTTDD--GETL--TARFVVVATGP 138

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 159 WSSPNpmgvdgMP-VPGEQDATVAAAIASGIPDVLEaerghYAGRRVLVVGAGHSAINVVLDllrLQAEAPETRVV---- 233
Cdd:COG2072   139 LSRPK------IPdIPGLEDFAGEQLHSADWRNPVD-----LAGKRVLVVGTGASAVQIAPE---LARVAAHVTVFqrtp 204

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 234 -WALRRERLDLIAGGGLDDKLAERGALGLAAKAAIEARR----------LELLAP------------------FAAEWIQ 284
Cdd:COG2072   205 pWVLPRPNYDPERGRPANYLGLEAPPALNRRDARAWLRRllraqvkdpeLGLLTPdyppgckrpllstdyyeaLRRGNVE 284

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 285 ARPDGV-RIEAR--HGERSVTLDVDRIVVATGFRPDLRLLAELRVALDPAVEAPPALAplidpnlhscGTVPPhgaaela 361
Cdd:COG2072   285 LVTGGIeRITEDgvVFADGTEHEVDVIVWATGFRADLPWLAPLDVRGRDGRSGPRAYL----------GVVVP------- 347

                         410       420       430
                  ....*....|....*....|....*....|....*...
gi 2311287113 362 qPEPGLYIVG-AKSYGRAPTFLMATgyEQVRSVVAAIA 398
Cdd:COG2072   348 -GFPNLFFLGpNSPSGHSSLTLGAE--RQARYIARLIA 382
Bthiol_YpdA TIGR04018
putative bacillithiol system oxidoreductase, YpdA family; Members of this protein family, ...
 9-377 7.51e-18

putative bacillithiol system oxidoreductase, YpdA family; Members of this protein family, including YpdA from Bacillus subtilis, are apparent oxidoreductases present only in species with an active bacillithiol system. They have been suggested actually to be thiol disulfide oxidoreductases (TDOR), although the evidence is incomplete. [Unknown function, Enzymes of unknown specificity]


Pssm-ID: 188533 [Multi-domain]  Cd Length: 316  Bit Score: 84.15  E-value: 7.51e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113   9 VAVIGAGPVGLAAAAHLVERGIRPLVFEKGRSVGAAVAAWSHVRVF-TPWSLNVDaaaarllaatGWPAPDPDETPTgaa 87
Cdd:TIGR04018   2 VIIIGAGPCGLACAIEAQKAGLSYLIIEKGNLVNSIYRYPTNMTFFsTSERLEIG----------GIPFISENPKPT--- 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113  88 ivrryleplaRVEAI----AAGLHLGATVmgvtrKGFDKMTSPGRDAAPFVLHwrdaaGRTHCTEARSIIDASGVWSSPN 163
Cdd:TIGR04018  69 ----------RNEALeyyrRVAERFKLNI-----RLYEEVLKVKKTDGGFEVT-----TEKGTYQAKNVIVATGYYDIPN 128

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 164 PMGvdgmpVPGEQdatvaaaiasgIPDVL----EAergH-YAGRRVLVVGAGHSAINVVLDLLRLQAEapetrVVWALRr 238
Cdd:TIGR04018 129 LLN-----VPGED-----------LPKVShyykEA---HpYFGQKVVVVGGSNSAVDAALELYRKGAE-----VTMVHR- 183

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 239 erldliaGGGLDDK-----LAErgalglaakaaIEARRLE--LLAPFAAEWIQARPDGVRIEARHGErSVTLDVDRIVVA 311
Cdd:TIGR04018 184 -------GDEVSSSvkywvRPD-----------IENRIKEgsIKAYFNSRVKEITEDSVTLETPDGE-VHTIPNDFVFAL 244

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2311287113 312 TGFRPDLRLLAELRVALDpaveaPPALAPLIDPNlhscgtvpphgaaELAQPEPGLYIVGAKSYGR 377
Cdd:TIGR04018 245 TGYRPDFEFLESLGVELD-----EDTGIPVYNPE-------------TMETNVPGLYLAGVIAAGM 292
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
9-330 8.33e-15

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 75.16  E-value: 8.33e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113   9 VAVIGAGPVGLAAAAHLVERGIRPLVFEKGRsVGAAVAAWSHVRvftpwslNvdaaaarllaatgWPApDPDETpTGAAI 88
Cdd:COG0492     3 VVIIGAGPAGLTAAIYAARAGLKTLVIEGGE-PGGQLATTKEIE-------N-------------YPG-FPEGI-SGPEL 59

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113  89 VRRyleplARVEAIAAGL-HLGATVMGVTRKGfdkmtspgrdaAPFVLHWRDaaGRTHctEARSIIDASGVwsSPNPMGV 167
Cdd:COG0492    60 AER-----LREQAERFGAeILLEEVTSVDKDD-----------GPFRVTTDD--GTEY--EAKAVIIATGA--GPRKLGL 117

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 168 dgmpvPGEQDATVAAAIASGIPDVLEaerghYAGRRVLVVGAGHSAINVVLDLLRLQAeapetRVVWALRRERLDliAGG 247
Cdd:COG0492   118 -----PGEEEFEGRGVSYCATCDGFF-----FRGKDVVVVGGGDSALEEALYLTKFAS-----KVTLIHRRDELR--ASK 180

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 248 GLDDKLAErgalglaakaaieARRLELLAPFAAEWIQ--ARPDGVRIEARHGERSVTLDVDRIVVATGFRPDLRLLAELR 325
Cdd:COG0492   181 ILVERLRA-------------NPKIEVLWNTEVTEIEgdGRVEGVTLKNVKTGEEKELEVDGVFVAIGLKPNTELLKGLG 247


                  ....*
gi 2311287113 326 VALDP 330
Cdd:COG0492   248 LELDE 252
Lys_Orn_oxgnase pfam13434
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase; This is a family of Rossmann fold ...
 106-316 2.67e-09

L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase; This is a family of Rossmann fold oxidoreductases that catalyze NADPH-dependent hydroxylation and are involved in siderophore biosynthesis. This family includes L-ornithine 5-monooxygenase, which catalyzes the hydroxylation of L-ornithine at the N5 position, and L-lysine 6-monooxygenase, which catalyzes the hydroxylation of lysine at the N6 position (EC:1.14.13.59).


Pssm-ID: 433204 [Multi-domain]  Cd Length: 338  Bit Score: 58.75  E-value: 2.67e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 106 LHLGATVMGVTrkgFDkmtsPGRDAAPFVLHWRDAAGRTHCTEARSIIDASGVwsSPNpmgvdgMPVPGEQDATVaaaIA 185
Cdd:pfam13434 112 LRFGQEVESVE---PD----AERGEPLLRVRVRDADGEETTFLARNLVLGTGG--EPY------IPECARGGERV---FH 173

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 186 SGipDVLEAERGHYAGRRVLVVGAGHSAINVVLDLLRlqaEAPETRVVWALRR--------------------------- 238
Cdd:pfam13434 174 SS--EYLERIDRLAAKKRIAVVGSGQSAAEIFRDLLR---RGPAYELTWVTRSpnffplddspfvneifspeyvdyfysl 248

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 239 ---ERLDLIAG------GGLDDKLAERGALGLAAKAAIEARRLELLAPFAAEWIQARPDG-VRIEARHGE--RSVTLDVD 306
Cdd:pfam13434 249 pedTRRALLREqkgtnyDGIDPSLIEEIYRLLYEQRVDGDPRHRLLPNREVQSAERVGDGgVELTLRDGEqgREETLETD 328

                         250
                  ....*....|
gi 2311287113 307 RIVVATGFRP 316
Cdd:pfam13434 329 VVVLATGYRR 338
Pyr_redox_3 pfam13738
Pyridine nucleotide-disulphide oxidoreductase;
16-371 2.72e-09

Pyridine nucleotide-disulphide oxidoreductase;


Pssm-ID: 404603 [Multi-domain]  Cd Length: 296  Bit Score: 58.39  E-value: 2.72e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113  16 PVGLAAAAHLVERGI-RPLVFEKGRsVGAAVAAWS-HVRVFTPwslnvdaaaarLLAATGWPAPD--------------P 79
Cdd:pfam13738   1 PAGIGCAIALKKAGLeDYLILEKGN-IGNSFYRYPtHMTFFSP-----------SFTSNGFGIPDlnaispgtspaftfN 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113  80 DETPTGAAIVRrYLEPLARVEAIAagLHLGATVMGVTR--KGFDKMTSPGrdaapfVLHwrdaagrthcteARSIIDASG 157
Cdd:pfam13738  69 REHPSGNEYAE-YLRRVADHFELP--INLFEEVTSVKKedDGFVVTTSKG------TYQ------------ARYVIIATG 127

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 158 VWSSPNPMGVDGMPVpgeqdatVAAAIASGIPdvleaerghYAGRRVLVVGAGHSAINVVLDLLRLQAeapetRVVWALR 237
Cdd:pfam13738 128 EFDFPNKLGVPELPK-------HYSYVKDFHP---------YAGQKVVVIGGYNSAVDAALELVRKGA-----RVTVLYR 186

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 238 RErldLIAGGGLDDKLAERGALGLAAKAAIEARRLELLAPFAAEWIQARPDGVRIEARHGeRSVTLDvDRIVVATGFRPD 317
Cdd:pfam13738 187 GS---EWEDRDSDPSYSLSPDTLNRLEELVKNGKIKAHFNAEVKEITEVDVSYKVHTEDG-RKVTSN-DDPILATGYHPD 261

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2311287113 318 LRLLAELRVALDpaveapPALAPLIDPNLHSCGTvpphgaaelaqpePGLYIVG 371
Cdd:pfam13738 262 LSFLKKGLFELD------EDGRPVLTEETESTNV-------------PGLFLAG 296
IucD COG3486
Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport and catabolism] ...
 105-325 3.14e-09

Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442709 [Multi-domain]  Cd Length: 440  Bit Score: 59.03  E-value: 3.14e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 105 GLHLGATVMGVTRKGfdkmtspgrDAAPFVLHWRDAAGRTHCTEARSIIDASGvwSSPN-PMGVDGMPvpgeqDATV--A 181
Cdd:COG3486   114 NVRFGTEVEAVEYDD---------DAGAFRVTVRDGTGERETYRARNLVLGTG--TRPYlPECFRGLP-----GERVfhS 177

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 182 AAIASGIPDVLEAerghyagRRVLVVGAGHSAINVVLDLLRlQAEAPETRVVWALRRERL-------------------- 241
Cdd:COG3486   178 SEYLHRKEDLQAA-------KRVTVVGSGQSAAEIFLDLLR-RQDGPGAELTWVTRSPGFfpldyskftneifspeyvdy 249

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 242 -------------------------DLIAggGLDDKLAERGALGlaakaaiEARRLELLApfAAEWIQARP--DGVRIEA 294
Cdd:COG3486   250 fyalpeevrdrllaeqkllykgispDLIN--EIYDLLYERSVGG-------DPPRVRLLP--NSEVTAVERagGGYRLTL 318

                         250       260       270
                  ....*....|....*....|....*....|....
gi 2311287113 295 RHGE--RSVTLDVDRIVVATGFRP-DLRLLAELR 325
Cdd:COG3486   319 RHLEtgERFELETDAVVLATGYRPrLPAFLEPLA 352
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 9-330 1.44e-08

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 56.17  E-value: 1.44e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113   9 VAVIGAGPVGLAAAAHLVERGIRPLVFEKGRsvgaavaAWSHVRVF-TPWSLNVdaaaarllaatgwpAPDPDETPTGAA 87
Cdd:pfam07992   3 VVVIGGGPAGLAAALTLAQLGGKVTLIEDEG-------TCPYGGCVlSKALLGA--------------AEAPEIASLWAD 61

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113  88 IVRRYLEPLARVEAIAAGLhlgatvMGVTRKGFDkmtspgRDAAPFVL-HWRDAAGRThcTEARSIIDASGvwSSPNPMG 166
Cdd:pfam07992  62 LYKRKEEVVKKLNNGIEVL------LGTEVVSID------PGAKKVVLeELVDGDGET--ITYDRLVIATG--ARPRLPP 125

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 167 VDGmpvpgeqdatVAAAIASGIPDVLEAERGHYA--GRRVLVVGAGHSAINVVLDLLRLQAEapetrVVWALRRERLdli 244
Cdd:pfam07992 126 IPG----------VELNVGFLVRTLDSAEALRLKllPKRVVVVGGGYIGVELAAALAKLGKE-----VTLIEALDRL--- 187

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 245 aGGGLDDKLAERGALGlaakaaIEARRLELLAPFAAEWIQARPDGVRIEARHGERsvtLDVDRIVVATGFRPDLRLLAEL 324
Cdd:pfam07992 188 -LRAFDEEISAALEKA------LEKNGVEVRLGTSVKEIIGDGDGVEVILKDGTE---IDADLVVVAIGRRPNTELLEAA 257


                  ....*.
gi 2311287113 325 RVALDP 330
Cdd:pfam07992 258 GLELDE 263
PRK07233 PRK07233
hypothetical protein; Provisional
 9-48 2.48e-06

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 49.89  E-value: 2.48e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 2311287113   9 VAVIGAGPVGLAAAAHLVERGIRPLVFEKGRSVGAAVAAW 48
Cdd:PRK07233    2 IAIVGGGIAGLAAAYRLAKRGHEVTVFEADDQLGGLAASF 41
COG3380 COG3380
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
8-103 4.24e-06

Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];


Pssm-ID: 442607 [Multi-domain]  Cd Length: 331  Bit Score: 48.72  E-value: 4.24e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113   8 PVAVIGAGPVGLAAAAHLVERGIRPLVFEKGRSVG----------------------------AAVAAWSHVRVFTPWSL 59
Cdd:COG3380     5 DIAIIGAGIAGLAAARALQDAGHEVTVFEKSRGVGgrmatrrldggrfdhgaqyftardprfqALVEEWLAAGLVAPWTF 84

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2311287113  60 NVdaaaaRLLAATGWPAPDPDE------TPTGAAIVRRYLEPL-----ARVEAIA 103
Cdd:COG3380    85 DF-----VVLDADGLVSPRDDGepryvgVPGMNALAKHLAAGLdvrlgTRVTALE 134
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
11-50 7.51e-06

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 43.67  E-value: 7.51e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 2311287113  11 VIGAGPVGLAAAAHLVERGIRPLVFEKGRSVGAAVAAWSH 50
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLGGNAYSYRV 40
PRK07208 PRK07208
hypothetical protein; Provisional
 8-42 8.17e-06

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 48.35  E-value: 8.17e-06
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 2311287113   8 PVAVIGAGPVGLAAAAHLVERGIRPLVFEKGRSVG 42
Cdd:PRK07208    6 SVVIIGAGPAGLTAAYELLKRGYPVTVLEADPVVG 40
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 8-42 8.67e-06

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 47.90  E-value: 8.67e-06
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 2311287113   8 PVAVIGAGPVGLAAAAHLVERGIRPLVFEKGRSVG 42
Cdd:COG1232     3 RVAVIGGGIAGLTAAYRLAKAGHEVTVLEASDRVG 37
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
14-161 1.62e-05

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 46.50  E-value: 1.62e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113  14 AGPVGLAAAAHLVERGIRPLVFEKGRSVGAAVAAWS----HVRVFTPWSLNVDAAAARLLAATGWPAPD----PDETPTG 85
Cdd:COG0644     1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKICGGGllprALEELEPLGLDEPLERPVRGARFYSPGGKsvelPPGRGGG 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2311287113  86 AAIVRRYLEPLARVEAIAAG--LHLGATVMGVTRKGfdkmtspGRdaapFVLHwrdaAGRTHCTEARSIIDASGVWSS 161
Cdd:COG0644    81 YVVDRARFDRWLAEQAEEAGaeVRTGTRVTDVLRDD-------GR----VVVR----TGDGEEIRADYVVDADGARSL 143
HI0933_like pfam03486
HI0933-like protein;
9-42 1.76e-05

HI0933-like protein;


Pssm-ID: 427330 [Multi-domain]  Cd Length: 406  Bit Score: 46.81  E-value: 1.76e-05
                          10        20        30
                  ....*....|....*....|....*....|....
gi 2311287113   9 VAVIGAGPVGLAAAAHLVERGIRPLVFEKGRSVG 42
Cdd:pfam03486   3 VIVIGGGAAGLMAAISAAKRGRRVLLIEKGKKLG 36
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 2-37 3.19e-05

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 46.28  E-value: 3.19e-05
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 2311287113   2 TGLRdlpVAVIGAGPVGLAAAAHLVERGIRPLVFEK 37
Cdd:COG0493   120 TGKK---VAVVGSGPAGLAAAYQLARAGHEVTVFEA 152
gltD PRK12810
glutamate synthase subunit beta; Reviewed
 2-37 5.74e-05

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 45.54  E-value: 5.74e-05
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 2311287113   2 TGLRdlpVAVIGAGPVGLAAAAHLVERGIRPLVFEK 37
Cdd:PRK12810  142 TGKK---VAVVGSGPAGLAAADQLARAGHKVTVFER 174
PRK08132 PRK08132
FAD-dependent oxidoreductase; Provisional
 8-42 8.36e-05

FAD-dependent oxidoreductase; Provisional


Pssm-ID: 236158 [Multi-domain]  Cd Length: 547  Bit Score: 44.86  E-value: 8.36e-05
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 2311287113   8 PVAVIGAGPVGLAAAAHLVERGIRPLVFEKGRSVG 42
Cdd:PRK08132   25 PVVVVGAGPVGLALAIDLAQQGVPVVLLDDDDTLS 59
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
 9-322 1.22e-04

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 44.40  E-value: 1.22e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113   9 VAVIGAGPVGLAAAAHLVERGIRPLVFEKGRSVGAavaawshvrvftpwsLNVdaaaarllaaTGWPA---PDpdetptg 85
Cdd:PRK11749  143 VAVIGAGPAGLTAAHRLARKGYDVTIFEARDKAGG---------------LLR----------YGIPEfrlPK------- 190

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113  86 aAIVRRYLEplaRVEAIAAGLHLGATVmgvtrkgfdkmtspGRDAAPFVLHWR-DAagrthctearsIIDASGVWsSPNP 164
Cdd:PRK11749  191 -DIVDREVE---RLLKLGVEIRTNTEV--------------GRDITLDELRAGyDA-----------VFIGTGAG-LPRF 240

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 165 MGvdgmpVPGEQDATVAAAI---ASgiPDVLEAERGHYAGRRVLVVGAGHSAINVVLDLLRLQAEapetRVVWALRRERL 241
Cdd:PRK11749  241 LG-----IPGENLGGVYSAVdflTR--VNQAVADYDLPVGKRVVVIGGGNTAMDAARTAKRLGAE----SVTIVYRRGRE 309

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 242 DLIA-----------GGGLDDKLA-ERGALGLAAKAAIEARRLELLAPfaaewiqaRPDGVRIEARHGERsVTLDVDRIV 309
Cdd:PRK11749  310 EMPAseeevehakeeGVEFEWLAApVEILGDEGRVTGVEFVRMELGEP--------DASGRRRVPIEGSE-FTLPADLVI 380

                         330
                  ....*....|...
gi 2311287113 310 VATGFRPDLRLLA 322
Cdd:PRK11749  381 KAIGQTPNPLILS 393
PRK12770 PRK12770
putative glutamate synthase subunit beta; Provisional
 152-316 1.71e-04

putative glutamate synthase subunit beta; Provisional


Pssm-ID: 237197 [Multi-domain]  Cd Length: 352  Bit Score: 43.82  E-value: 1.71e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 152 IIDASGVWSSpNPMGVDGMPVPGEQDA------TVAAAIA----SGIPDVleaerghyAGRRVLVVGAGHSAINVVLDLL 221
Cdd:PRK12770  122 VLIATGTWKS-RKLGIPGEDLPGVYSAleylfrIRAAKLGylpwEKVPPV--------EGKKVVVVGAGLTAVDAALEAV 192

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2311287113 222 RLQAEapetRVVWALRRERLDLIAGGGLDDKLAER-----------GALGLAAKAAIEARRLELLAPFAAewiqARPDGV 290
Cdd:PRK12770  193 LLGAE----KVYLAYRRTINEAPAGKYEIERLIARgveflelvtpvRIIGEGRVEGVELAKMRLGEPDES----GRPRPV 264

                         170       180
                  ....*....|....*....|....*.
gi 2311287113 291 RIEarhGERSVtLDVDRIVVATGFRP 316
Cdd:PRK12770  265 PIP---GSEFV-LEADTVVFAIGEIP 286
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 9-44 1.78e-04

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 43.54  E-value: 1.78e-04
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 2311287113   9 VAVIGAGPVGLAAAAHLVERGIRPLVFEKGRSVGAA 44
Cdd:pfam01266   2 VVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGSG 37
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
9-57 5.64e-04

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 42.20  E-value: 5.64e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 2311287113   9 VAVIGAGPVGLAAAAHLVERGIRPLVFEKGR-SVGAAVAAWSHVRVFTPW 57
Cdd:COG0665     5 VVVIGGGIAGLSTAYHLARRGLDVTVLERGRpGSGASGRNAGQLRPGLAA 54
COG3349 COG3349
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ...
 9-48 5.95e-04

Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];


Pssm-ID: 442577 [Multi-domain]  Cd Length: 445  Bit Score: 42.15  E-value: 5.95e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 2311287113   9 VAVIGAGPVGLAAAAHLVERGIRPLVFEKGRSVGAAVAAW 48
Cdd:COG3349     6 VVVVGGGLAGLAAAVELAEAGFRVTLLEARPRLGGRARSF 45
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 9-50 6.72e-04

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 42.14  E-value: 6.72e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 2311287113   9 VAVIGAGPVGLAAAAHLVERGIRPLVFEKGRSVGAAVAAWSH 50
Cdd:COG1233     6 VVVIGAGIGGLAAAALLARAGYRVTVLEKNDTPGGRARTFER 47
YdhS COG4529
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
1-46 1.38e-03

Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];


Pssm-ID: 443597 [Multi-domain]  Cd Length: 466  Bit Score: 41.09  E-value: 1.38e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 2311287113   1 MTGlRDLPVAVIGAGPVGLAAAAHLVERGIRPL---VFEKGRSVGAAVA 46
Cdd:COG4529     1 MTG-ARKRIAIIGGGASGTALAIHLLRRAPEPLritLFEPRPELGRGVA 48
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
9-36 1.90e-03

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 40.67  E-value: 1.90e-03
                          10        20
                  ....*....|....*....|....*...
gi 2311287113   9 VAVIGAGPVGLAAAAHLVERGIRPLVFE 36
Cdd:COG1231    10 VVIVGAGLAGLAAARELRKAGLDVTVLE 37
mhpA PRK06183
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
6-37 2.72e-03

bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;


Pssm-ID: 235727 [Multi-domain]  Cd Length: 500  Bit Score: 40.28  E-value: 2.72e-03
                          10        20        30
                  ....*....|....*....|....*....|..
gi 2311287113   6 DLPVAVIGAGPVGLAAAAHLVERGIRPLVFEK 37
Cdd:PRK06183   10 DTDVVIVGAGPVGLTLANLLGQYGVRVLVLER 41
PRK12771 PRK12771
putative glutamate synthase (NADPH) small subunit; Provisional
 2-42 3.17e-03

putative glutamate synthase (NADPH) small subunit; Provisional


Pssm-ID: 237198 [Multi-domain]  Cd Length: 564  Bit Score: 39.86  E-value: 3.17e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 2311287113   2 TGLRdlpVAVIGAGPVGLAAAAHLVERGIRPLVFEKGRSVG 42
Cdd:PRK12771  136 TGKR---VAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLG 173
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 5-47 3.74e-03

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 39.54  E-value: 3.74e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 2311287113   5 RDLPVAVIGAGPVGLAAAAHLVERGIRPLVFEKGRSVGAAVAA 47
Cdd:COG0654     2 MRTDVLIVGGGPAGLALALALARAGIRVTVVERAPPPRPDGRG 44
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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