TrkH family potassium uptake protein is the membrane component of a potassium transport system and may bind other membrane components as well as periplasmic proteins
Cation transport protein; This family consists of various cation transport proteins (Trk) and ...
28-419
8.80e-88
Cation transport protein; This family consists of various cation transport proteins (Trk) and V-type sodium ATP synthase subunit J or translocating ATPase J EC:3.6.1.34. These proteins are involved in active sodium up-take utilizing ATP in the process. TrkH a member of the family from E. coli is a hydrophobic membrane protein and determines the specificity and kinetics of cation transport by the TrK system in E. coli.
The actual alignment was detected with superfamily member TIGR00933:
Pssm-ID: 473079 Cd Length: 391 Bit Score: 272.99 E-value: 8.80e-88
potassium uptake protein, TrkH family; The proteins of the Trk family are derived from ...
28-419
8.80e-88
potassium uptake protein, TrkH family; The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273349 Cd Length: 391 Bit Score: 272.99 E-value: 8.80e-88
Cation transport protein; This family consists of various cation transport proteins (Trk) and ...
19-423
2.34e-39
Cation transport protein; This family consists of various cation transport proteins (Trk) and V-type sodium ATP synthase subunit J or translocating ATPase J EC:3.6.1.34. These proteins are involved in active sodium up-take utilizing ATP in the process. TrkH a member of the family from E. coli is a hydrophobic membrane protein and determines the specificity and kinetics of cation transport by the TrK system in E. coli.
Pssm-ID: 280534 Cd Length: 491 Bit Score: 147.96 E-value: 2.34e-39
potassium uptake protein, TrkH family; The proteins of the Trk family are derived from ...
28-419
8.80e-88
potassium uptake protein, TrkH family; The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273349 Cd Length: 391 Bit Score: 272.99 E-value: 8.80e-88
Cation transport protein; This family consists of various cation transport proteins (Trk) and ...
19-423
2.34e-39
Cation transport protein; This family consists of various cation transport proteins (Trk) and V-type sodium ATP synthase subunit J or translocating ATPase J EC:3.6.1.34. These proteins are involved in active sodium up-take utilizing ATP in the process. TrkH a member of the family from E. coli is a hydrophobic membrane protein and determines the specificity and kinetics of cation transport by the TrK system in E. coli.
Pssm-ID: 280534 Cd Length: 491 Bit Score: 147.96 E-value: 2.34e-39
potassium uptake protein, Trk family; The proteins of the Trk family are derived from ...
156-419
1.34e-18
potassium uptake protein, Trk family; The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. This family is specific for the eukaryotic Trk system. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 130009 [Multi-domain] Cd Length: 800 Bit Score: 88.50 E-value: 1.34e-18
potassium uptake protein, Trk family; The proteins of the Trk family are derived from ...
13-82
1.63e-03
potassium uptake protein, Trk family; The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. This family is specific for the eukaryotic Trk system. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 130009 [Multi-domain] Cd Length: 800 Bit Score: 40.74 E-value: 1.63e-03
Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
References:
Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
of the residues that compose this conserved feature have been mapped to the query sequence.
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