NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|2410356638|ref|WP_268388719|]
View 

DUF2634 domain-containing protein [Bacillus altitudinis]

Protein Classification

DUF2634 domain-containing protein( domain architecture ID 10566915)

DUF2634 domain-containing protein, similar to Bacillus subtilis phage-like element PBSX protein XkdS, of unknown function

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF2634 pfam10934
Protein of unknown function (DUF2634); Some members in this family of proteins are annotated ...
 26-125 4.95e-31

Protein of unknown function (DUF2634); Some members in this family of proteins are annotated as phage related, xkdS however currently there is no known function.


:

Pssm-ID: 463197  Cd Length: 104  Bit Score: 106.91  E-value: 4.95e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2410356638  26 YRIDFESGRL-----TNEKINGLDAIRQFVYMALRTERYSHAVYSHDVGCEVQEAVSdEESTDEYKEMEIPRLIEEALLV 100
Cdd:pfam10934   1 YKFDFEKGDFvldpgKLGIVDGLEALKQWIYKALKTERYRYLIYSWNYGIELEDLIG-KNYNKDYVESEIKREITEALLV 79

                          90       100
                  ....*....|....*....|....*
gi 2410356638 101 DERIESVQDFEITKEGAAFKVVFDV 125
Cdd:pfam10934  80 DPRITSVDNFSFEWEGDDLKVTFTV 104
 
Name Accession Description Interval E-value
DUF2634 pfam10934
Protein of unknown function (DUF2634); Some members in this family of proteins are annotated ...
 26-125 4.95e-31

Protein of unknown function (DUF2634); Some members in this family of proteins are annotated as phage related, xkdS however currently there is no known function.


Pssm-ID: 463197  Cd Length: 104  Bit Score: 106.91  E-value: 4.95e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2410356638  26 YRIDFESGRL-----TNEKINGLDAIRQFVYMALRTERYSHAVYSHDVGCEVQEAVSdEESTDEYKEMEIPRLIEEALLV 100
Cdd:pfam10934   1 YKFDFEKGDFvldpgKLGIVDGLEALKQWIYKALKTERYRYLIYSWNYGIELEDLIG-KNYNKDYVESEIKREITEALLV 79

                          90       100
                  ....*....|....*....|....*
gi 2410356638 101 DERIESVQDFEITKEGAAFKVVFDV 125
Cdd:pfam10934  80 DPRITSVDNFSFEWEGDDLKVTFTV 104
 
Name Accession Description Interval E-value
DUF2634 pfam10934
Protein of unknown function (DUF2634); Some members in this family of proteins are annotated ...
 26-125 4.95e-31

Protein of unknown function (DUF2634); Some members in this family of proteins are annotated as phage related, xkdS however currently there is no known function.


Pssm-ID: 463197  Cd Length: 104  Bit Score: 106.91  E-value: 4.95e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2410356638  26 YRIDFESGRL-----TNEKINGLDAIRQFVYMALRTERYSHAVYSHDVGCEVQEAVSdEESTDEYKEMEIPRLIEEALLV 100
Cdd:pfam10934   1 YKFDFEKGDFvldpgKLGIVDGLEALKQWIYKALKTERYRYLIYSWNYGIELEDLIG-KNYNKDYVESEIKREITEALLV 79

                          90       100
                  ....*....|....*....|....*
gi 2410356638 101 DERIESVQDFEITKEGAAFKVVFDV 125
Cdd:pfam10934  80 DPRITSVDNFSFEWEGDDLKVTFTV 104
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH