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Conserved domains on  [gi|2428125181|ref|WP_270874107|]
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MULTISPECIES: molybdopterin-guanine dinucleotide biosynthesis protein B [unclassified Campylobacter]

Protein Classification

molybdopterin-guanine dinucleotide biosynthesis protein B( domain architecture ID 10004478)

molybdopterin-guanine dinucleotide biosynthesis protein B catalyzes the attachment of the guanine dinucleotide to molybdopterin

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
MobB COG1763
Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme transport and metabolism]; ...
 1-161 7.41e-49

Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme transport and metabolism]; Molybdopterin-guanine dinucleotide biosynthesis protein is part of the Pathway/BioSystem: Molybdopterin biosynthesis


:

Pssm-ID: 441369 [Multi-domain]  Cd Length: 162  Bit Score: 154.95  E-value: 7.41e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181   1 MKrlAIAFSGPSNTGKTTLICKVAQIFIEQNLKVAIVKHDPKDkAKFDTEGKDSAKFSAVGAD-VAVVSPTRTTYFLKQM 79
Cdd:COG1763     1 MP--VLGIVGYSGSGKTTLLEKLIPELKARGLRVGTIKHAHHD-FDIDTPGKDSYRHREAGADeVLVASPERWALMTELP 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181  80 R--NLDEIIAGFGDFDILIVEGLKTLPLPRISLFRDKIDEAYL----PFSQAIATNLPkaqMDKACPVnFDINDAQSIAK 153
Cdd:COG1763    78 EepSLDELLARLDDVDLVLVEGFKHEPLPKIEVHRAEEGKPLLypedPNIIAVASDAP---LPTGLPV-FDLNDPEAIAD 153


                  ....*...
gi 2428125181 154 WILDNAKK 161
Cdd:COG1763   154 FILEWLKR 161
 
Name Accession Description Interval E-value
MobB COG1763
Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme transport and metabolism]; ...
 1-161 7.41e-49

Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme transport and metabolism]; Molybdopterin-guanine dinucleotide biosynthesis protein is part of the Pathway/BioSystem: Molybdopterin biosynthesis


Pssm-ID: 441369 [Multi-domain]  Cd Length: 162  Bit Score: 154.95  E-value: 7.41e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181   1 MKrlAIAFSGPSNTGKTTLICKVAQIFIEQNLKVAIVKHDPKDkAKFDTEGKDSAKFSAVGAD-VAVVSPTRTTYFLKQM 79
Cdd:COG1763     1 MP--VLGIVGYSGSGKTTLLEKLIPELKARGLRVGTIKHAHHD-FDIDTPGKDSYRHREAGADeVLVASPERWALMTELP 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181  80 R--NLDEIIAGFGDFDILIVEGLKTLPLPRISLFRDKIDEAYL----PFSQAIATNLPkaqMDKACPVnFDINDAQSIAK 153
Cdd:COG1763    78 EepSLDELLARLDDVDLVLVEGFKHEPLPKIEVHRAEEGKPLLypedPNIIAVASDAP---LPTGLPV-FDLNDPEAIAD 153


                  ....*...
gi 2428125181 154 WILDNAKK 161
Cdd:COG1763   154 FILEWLKR 161
MobB cd03116
molybdopterin-guanine dinucleotide biosynthesis protein B; Molybdenum is an essential trace ...
 4-156 5.64e-39

molybdopterin-guanine dinucleotide biosynthesis protein B; Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes. In Escherichia coli, the synthesis of Moco involves genes from several loci: moa, mob, mod, moe and mog. The mob locus contains mobA and mobB genes. MobB catalyzes the attachment of the guanine dinucleotide to molybdopterin.


Pssm-ID: 349770 [Multi-domain]  Cd Length: 157  Bit Score: 129.68  E-value: 5.64e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181   4 LAIAFSGPSNTGKTTLICKVAQIFIEQNLKVAIVKHDPKDKaKFDTEGKDSAKFSAVGAD-VAVVSPTR---TTYFLKQM 79
Cdd:cd03116     1 KIVGVVGKSGSGKTTLIEKLIPELKARGLRVAVIKHTHHGF-DIDTPGKDSYRHRQAGADaVLVSSPNRlalIHERPEWE 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181  80 RNLDEIIAGFGDFDILIVEGLKTLPLPRISLFRDKIDEAYL----PFSQAIATNLPKAQMDKacPVnFDINDAQSIAKWI 155
Cdd:cd03116    80 LTLLELLARFSDVDLVLVEGFKKEPIPKIEVFREEEGKPLLlpedPNVIAVATDEPLDMLGL--PV-FDLNDVEEIADFI 156


                  .
gi 2428125181 156 L 156
Cdd:cd03116   157 L 157
mobB TIGR00176
molybdopterin-guanine dinucleotide biosynthesis protein MobB; This molybdenum cofactor ...
 6-158 3.77e-38

molybdopterin-guanine dinucleotide biosynthesis protein MobB; This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes. [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin]


Pssm-ID: 272943 [Multi-domain]  Cd Length: 155  Bit Score: 127.49  E-value: 3.77e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181   6 IAFSGPSNTGKTTLICKVAQIFIEQNLKVAIVKHDpKDKAKFDTEGKDSAKFSAVGADVAVVSPTRTTYFLKQM---RNL 82
Cdd:TIGR00176   2 LQIVGPKNSGKTTLIERLVKALKARGYRVATIKHD-HHDFDIDKNGKDSYRHREAGADQVIVASSRRYAFMHETqeeRDL 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2428125181  83 DEIIAGFGDFDILIVEGLKTLPLPRISLFRDKIDEAYL--PFSQAIATNLPKAQMDKAcpvNFDINDAQSIAKWILDN 158
Cdd:TIGR00176  81 EALLDRLPDLDIILVEGFKDSPLPKIVVFRNPAEESEIirPKIIAIASDESLSALKLP---VLDLNDVEAIAAFIEKN 155
MobB pfam03205
Molybdopterin guanine dinucleotide synthesis protein B; This protein contains a P-loop.
 6-129 4.94e-28

Molybdopterin guanine dinucleotide synthesis protein B; This protein contains a P-loop.


Pssm-ID: 427196 [Multi-domain]  Cd Length: 133  Bit Score: 101.09  E-value: 4.94e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181   6 IAFSGPSNTGKTTLICKVAQIFIEQNLKVAIVKHDPKDkAKFDTEGKDSAKFSAVGAD-VAVVSPTR----TTYFLKQMR 80
Cdd:pfam03205   2 LGIVGWSGSGKTTLLEKLIPELKARGLRVGTIKHAHHG-FDIDKPGKDSWRHRKAGASeVLVASPGRwalmHELRDEPEP 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2428125181  81 NLDEIIAGFGDFDILIVEGLKTLPLPRISLFRDKIDEAYL----PFSQAIATN 129
Cdd:pfam03205  81 SLEELLARLSPVDLVLVEGFKKEPYPKIEVHRAALGKPPLlpcdPDIIAVASD 133
PRK14489 PRK14489
putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; ...
 5-157 7.32e-26

putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional


Pssm-ID: 237727 [Multi-domain]  Cd Length: 366  Bit Score: 100.60  E-value: 7.32e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181   5 AIAFSGPSNTGKTTLICKVAQIFIEQNLKVAIVKHDPKdKAKFDTEGKDSAKFSAVGADVA-VVSPTRTTYFLK---QMR 80
Cdd:PRK14489  207 LLGVVGYSGTGKTTLLEKLIPELIARGYRIGLIKHSHH-RVDIDKPGKDSHRLRAAGANPTmIVCPERWALMREtpeEAV 285

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181  81 NLDEIIAGF--GDFDILIVEGLKTLPLPRISLFRDKIDEAYL---PFSQAIATNLPKAQMdkacPVnFDINDAQSIAKWI 155
Cdd:PRK14489  286 PFKVLIATFdpEEVDLILVEGFKHEPLPKIQLHRQLISKPLPeldLWTIATATDYPLARD----PR-LDINDVKQIADFV 360


                  ..
gi 2428125181 156 LD 157
Cdd:PRK14489  361 RQ 362
 
Name Accession Description Interval E-value
MobB COG1763
Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme transport and metabolism]; ...
 1-161 7.41e-49

Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme transport and metabolism]; Molybdopterin-guanine dinucleotide biosynthesis protein is part of the Pathway/BioSystem: Molybdopterin biosynthesis


Pssm-ID: 441369 [Multi-domain]  Cd Length: 162  Bit Score: 154.95  E-value: 7.41e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181   1 MKrlAIAFSGPSNTGKTTLICKVAQIFIEQNLKVAIVKHDPKDkAKFDTEGKDSAKFSAVGAD-VAVVSPTRTTYFLKQM 79
Cdd:COG1763     1 MP--VLGIVGYSGSGKTTLLEKLIPELKARGLRVGTIKHAHHD-FDIDTPGKDSYRHREAGADeVLVASPERWALMTELP 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181  80 R--NLDEIIAGFGDFDILIVEGLKTLPLPRISLFRDKIDEAYL----PFSQAIATNLPkaqMDKACPVnFDINDAQSIAK 153
Cdd:COG1763    78 EepSLDELLARLDDVDLVLVEGFKHEPLPKIEVHRAEEGKPLLypedPNIIAVASDAP---LPTGLPV-FDLNDPEAIAD 153


                  ....*...
gi 2428125181 154 WILDNAKK 161
Cdd:COG1763   154 FILEWLKR 161
MobB cd03116
molybdopterin-guanine dinucleotide biosynthesis protein B; Molybdenum is an essential trace ...
 4-156 5.64e-39

molybdopterin-guanine dinucleotide biosynthesis protein B; Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes. In Escherichia coli, the synthesis of Moco involves genes from several loci: moa, mob, mod, moe and mog. The mob locus contains mobA and mobB genes. MobB catalyzes the attachment of the guanine dinucleotide to molybdopterin.


Pssm-ID: 349770 [Multi-domain]  Cd Length: 157  Bit Score: 129.68  E-value: 5.64e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181   4 LAIAFSGPSNTGKTTLICKVAQIFIEQNLKVAIVKHDPKDKaKFDTEGKDSAKFSAVGAD-VAVVSPTR---TTYFLKQM 79
Cdd:cd03116     1 KIVGVVGKSGSGKTTLIEKLIPELKARGLRVAVIKHTHHGF-DIDTPGKDSYRHRQAGADaVLVSSPNRlalIHERPEWE 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181  80 RNLDEIIAGFGDFDILIVEGLKTLPLPRISLFRDKIDEAYL----PFSQAIATNLPKAQMDKacPVnFDINDAQSIAKWI 155
Cdd:cd03116    80 LTLLELLARFSDVDLVLVEGFKKEPIPKIEVFREEEGKPLLlpedPNVIAVATDEPLDMLGL--PV-FDLNDVEEIADFI 156


                  .
gi 2428125181 156 L 156
Cdd:cd03116   157 L 157
mobB TIGR00176
molybdopterin-guanine dinucleotide biosynthesis protein MobB; This molybdenum cofactor ...
 6-158 3.77e-38

molybdopterin-guanine dinucleotide biosynthesis protein MobB; This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes. [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin]


Pssm-ID: 272943 [Multi-domain]  Cd Length: 155  Bit Score: 127.49  E-value: 3.77e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181   6 IAFSGPSNTGKTTLICKVAQIFIEQNLKVAIVKHDpKDKAKFDTEGKDSAKFSAVGADVAVVSPTRTTYFLKQM---RNL 82
Cdd:TIGR00176   2 LQIVGPKNSGKTTLIERLVKALKARGYRVATIKHD-HHDFDIDKNGKDSYRHREAGADQVIVASSRRYAFMHETqeeRDL 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2428125181  83 DEIIAGFGDFDILIVEGLKTLPLPRISLFRDKIDEAYL--PFSQAIATNLPKAQMDKAcpvNFDINDAQSIAKWILDN 158
Cdd:TIGR00176  81 EALLDRLPDLDIILVEGFKDSPLPKIVVFRNPAEESEIirPKIIAIASDESLSALKLP---VLDLNDVEAIAAFIEKN 155
MobB pfam03205
Molybdopterin guanine dinucleotide synthesis protein B; This protein contains a P-loop.
 6-129 4.94e-28

Molybdopterin guanine dinucleotide synthesis protein B; This protein contains a P-loop.


Pssm-ID: 427196 [Multi-domain]  Cd Length: 133  Bit Score: 101.09  E-value: 4.94e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181   6 IAFSGPSNTGKTTLICKVAQIFIEQNLKVAIVKHDPKDkAKFDTEGKDSAKFSAVGAD-VAVVSPTR----TTYFLKQMR 80
Cdd:pfam03205   2 LGIVGWSGSGKTTLLEKLIPELKARGLRVGTIKHAHHG-FDIDKPGKDSWRHRKAGASeVLVASPGRwalmHELRDEPEP 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2428125181  81 NLDEIIAGFGDFDILIVEGLKTLPLPRISLFRDKIDEAYL----PFSQAIATN 129
Cdd:pfam03205  81 SLEELLARLSPVDLVLVEGFKKEPYPKIEVHRAALGKPPLlpcdPDIIAVASD 133
PRK14489 PRK14489
putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; ...
 5-157 7.32e-26

putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional


Pssm-ID: 237727 [Multi-domain]  Cd Length: 366  Bit Score: 100.60  E-value: 7.32e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181   5 AIAFSGPSNTGKTTLICKVAQIFIEQNLKVAIVKHDPKdKAKFDTEGKDSAKFSAVGADVA-VVSPTRTTYFLK---QMR 80
Cdd:PRK14489  207 LLGVVGYSGTGKTTLLEKLIPELIARGYRIGLIKHSHH-RVDIDKPGKDSHRLRAAGANPTmIVCPERWALMREtpeEAV 285

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181  81 NLDEIIAGF--GDFDILIVEGLKTLPLPRISLFRDKIDEAYL---PFSQAIATNLPKAQMdkacPVnFDINDAQSIAKWI 155
Cdd:PRK14489  286 PFKVLIATFdpEEVDLILVEGFKHEPLPKIQLHRQLISKPLPeldLWTIATATDYPLARD----PR-LDINDVKQIADFV 360


                  ..
gi 2428125181 156 LD 157
Cdd:PRK14489  361 RQ 362
PRK14494 PRK14494
putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/FeS domain-containing ...
 1-116 4.16e-23

putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/FeS domain-containing protein protein; Provisional


Pssm-ID: 237731 [Multi-domain]  Cd Length: 229  Bit Score: 90.81  E-value: 4.16e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181   1 MKrlAIAFSGPSNTGKTTLICKVAQIFIEQNLKVAIVKHdpkDKAKFDTEGKDSAKFSAVGADVAVVSPTRTTYFLKQMR 80
Cdd:PRK14494    1 MR--AIGVIGFKDSGKTTLIEKILKNLKERGYRVATAKH---THHEFDKPDTDTYRFKKAGAEVVVVSTDETAAFLYDRM 75

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 2428125181  81 NLDEIIAGFgDFDILIVEGLKT-LPLPRISLFRDKID 116
Cdd:PRK14494   76 DLNEILSLL-DADFLLIEGFKElLNIPKILCLRDAEG 111
PRK14490 PRK14490
putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MobA; ...
 6-155 3.45e-17

putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MobA; Provisional


Pssm-ID: 237728 [Multi-domain]  Cd Length: 369  Bit Score: 77.01  E-value: 3.45e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181   6 IAFSGPSNTGKTTLICKVAQIFIEqNLKVAIVKH-----DpkdkakFDTEGKDSAKFSAVGADVAVVS-PTRTTYFLKQM 79
Cdd:PRK14490    8 IAFCGYSGSGKTTLITALVRRLSE-RFSVGYYKHgchrfD------IDREGKDSDLARKAGASTVMISdPEKHALIAGGP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181  80 RNLDEIIAGFGDFDILIVEGLKTLPLPRISLF-RDK-----IDEAYLPFSQAIATNLPKAQM-DKACPVnFDINDAQSIA 152
Cdd:PRK14490   81 PDPLLERGAFLDCDLLLVEGLKELPLPKILLVdRERkildlLEQGSVTNVVALVVPDDPASYpDFGLPV-FHRDDIAAIA 159


                  ...
gi 2428125181 153 KWI 155
Cdd:PRK14490  160 DFI 162
PRK10751 PRK10751
molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional
 4-157 3.10e-15

molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional


Pssm-ID: 236750 [Multi-domain]  Cd Length: 173  Bit Score: 68.95  E-value: 3.10e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181   4 LAI-AFSGpsnTGKTTLICKVAQIFIEQNLKVAIVKHDPKDkAKFDTEGKDSAKFSAVGADVAVVSPTRTTYFLKQMRNL 82
Cdd:PRK10751    9 LAIaAWSG---TGKTTLLKKLIPALCARGIRPGLIKHTHHD-MDVDKPGKDSYELRKAGAAQTLVASQQRWALMTETPDQ 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181  83 DEI----IAGFGD---FDILIVEGLKTLPLPRISLFRD---------KIDEaylpFSQAIATNLPkaqMDKACPVnFDIN 146
Cdd:PRK10751   85 EELdlhyLASRMDaskLDLILVEGFKHEPIAKIALFRDgaghrpeelVIDE----HVIAVASDVP---LNLDVPL-LDIN 156

                         170
                  ....*....|.
gi 2428125181 147 DAQSIAKWILD 157
Cdd:PRK10751  157 DVEQIADFIVE 167
PRK14491 PRK14491
putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoeA; ...
 8-161 1.70e-14

putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoeA; Provisional


Pssm-ID: 237729 [Multi-domain]  Cd Length: 597  Bit Score: 69.64  E-value: 1.70e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181   8 FSGPSNTGKTTLICKVAQIFIEQNLKVAIVKHDPKDkakFDT--EGKDSAKFSAVGADVAVVSPTRTTYFLKQMRN---- 81
Cdd:PRK14491   15 FCAYSGTGKTTLLEQLIPELNQRGLRLAVIKHAHHN---FDVdqPGKDSYRLRKAGASQMLVASRVRWALMTETPRdgep 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181  82 -LDEIIAGFGD--FDILIVEGLKTLPLPRISLFRDKIDEAYL----PFSQAIATNlpKAQMDKACPVnFDINDAQSIAKW 154
Cdd:PRK14491   92 eLPHLLKQIDAdkVDIVLVEGFKKLALPKIELHRAAHGKPWIyphdENIIAIACD--DTPLPSELPR-LDINDVAAIADF 168


                  ....*..
gi 2428125181 155 ILDNAKK 161
Cdd:PRK14491  169 VLEYAQN 175
PRK14495 PRK14495
putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/unknown domain fusion ...
 10-159 2.57e-11

putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/unknown domain fusion protein; Provisional


Pssm-ID: 172967  Cd Length: 452  Bit Score: 60.46  E-value: 2.57e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181  10 GPSNTGKTTLICKVAQIFIEQNLKVAIVKHDPKDkAKFDTEGKDSAKFSAVGADVAVVSPTRTTYFLKQMRN----LDEI 85
Cdd:PRK14495    8 GWKDAGKTGLVERLVAAIAARGFSVSTVKHSHHD-VDPDPPGSDSHRHRAAGAAEVVLAGPRRLILTREHRGepprLAAI 86

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2428125181  86 IAGFGDFDILIVEGLKTLPLPRISLFRDKIDEAYL----PFSQAIATNlpkAQMDKACPVnFDINDAQSIAKWILDNA 159
Cdd:PRK14495   87 LERMAPVDLVLVEGYKTEPHPKIEVFRKAAGHALRqpedPWVRAVASD---TQMALPVPV-LDLDDTEAVADFLLTDS 160
PRK14493 PRK14493
putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoaE; ...
 1-110 7.48e-11

putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoaE; Provisional


Pssm-ID: 237730 [Multi-domain]  Cd Length: 274  Bit Score: 58.47  E-value: 7.48e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2428125181   1 MKRLAIAfsGPSNTGKTTLICKVAQIFIEQNlKVAIVKHDpkDKAKFDTEGKDSAKFSAVGADVAV-VSPTRTTYFLKQm 79
Cdd:PRK14493    1 MKVLSIV--GYKATGKTTLVERLVDRLSGRG-RVGTVKHM--DTERLNPDGTDTGRHFDAGADVVYgLTDGEWVASGRD- 74

                          90       100       110
                  ....*....|....*....|....*....|..
gi 2428125181  80 RNLDEIIAGFG-DFDILIVEGLKTLPLPRISL 110
Cdd:PRK14493   75 RSLDDALDDLApGMDYAVVEGFKDSRLPKVVL 106
PRK12727 PRK12727
flagellar biosynthesis protein FlhF;
6-40 5.98e-04

flagellar biosynthesis protein FlhF;


Pssm-ID: 237182 [Multi-domain]  Cd Length: 559  Bit Score: 39.20  E-value: 5.98e-04
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 2428125181   6 IAFSGPSNTGKTTLICKVAQIFIEQNL--KVAIVKHD 40
Cdd:PRK12727  353 IALVGPTGAGKTTTIAKLAQRFAAQHAprDVALVTTD 389
SRP54 pfam00448
SRP54-type protein, GTPase domain; This family includes relatives of the G-domain of the SRP54 ...
 6-37 3.67e-03

SRP54-type protein, GTPase domain; This family includes relatives of the G-domain of the SRP54 family of proteins.


Pssm-ID: 459814 [Multi-domain]  Cd Length: 193  Bit Score: 36.37  E-value: 3.67e-03
                          10        20        30
                  ....*....|....*....|....*....|..
gi 2428125181   6 IAFSGPSNTGKTTLICKVAQIFIEQNLKVAIV 37
Cdd:pfam00448   3 ILLVGLQGSGKTTTIAKLAAYLKKKGKKVLLV 34
CbiA pfam01656
CobQ/CobB/MinD/ParA nucleotide binding domain; This family consists of various cobyrinic acid ...
 4-41 4.12e-03

CobQ/CobB/MinD/ParA nucleotide binding domain; This family consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from S.typhimurium, and CobQ from R. capsulatus. These amidases catalyze amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria. The family also contains dethiobiotin synthetases as well as the plasmid partitioning proteins of the MinD/ParA family.


Pssm-ID: 426369 [Multi-domain]  Cd Length: 228  Bit Score: 36.17  E-value: 4.12e-03
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 2428125181   4 LAIAfSGPSNTGKTTLICKVAQIFIEQNLKVAIVKHDP 41
Cdd:pfam01656   1 IAIA-GTKGGVGKTTLAANLARALARRGLRVLLIDLDP 37
SIMIBI cd01983
SIMIBI (signal recognition particle, MinD and BioD)-class NTPases; SIMIBI (after signal ...
 6-40 5.51e-03

SIMIBI (signal recognition particle, MinD and BioD)-class NTPases; SIMIBI (after signal recognition particle, MinD, and BioD), consists of signal recognition particle (SRP) GTPases, the assemblage of MinD-like ATPases, which are involved in protein localization, chromosome partitioning, and membrane transport, and a group of metabolic enzymes with kinase or related phosphate transferase activity. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.


Pssm-ID: 349751 [Multi-domain]  Cd Length: 107  Bit Score: 34.71  E-value: 5.51e-03
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 2428125181   6 IAFSGP-SNTGKTTLICKVAQIFIEQNLKVAIVKHD 40
Cdd:cd01983     3 IAVTGGkGGVGKTTLAAALAVALAAKGYKVLLIDLD 38
FlhF COG1419
Flagellar biosynthesis GTPase FlhF [Cell motility];
6-37 8.69e-03

Flagellar biosynthesis GTPase FlhF [Cell motility];


Pssm-ID: 441029 [Multi-domain]  Cd Length: 361  Bit Score: 35.61  E-value: 8.69e-03
                          10        20        30
                  ....*....|....*....|....*....|...
gi 2428125181   6 IAFSGPSNTGKTTLICKVAQIF-IEQNLKVAIV 37
Cdd:COG1419   167 IALVGPTGVGKTTTIAKLAARFvLRGKKKVALI 199
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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