hypothetical protein [Gemmatimonas phototrophica]
List of domain hits
Name | Accession | Description | Interval | E-value | |||
PriA super family | cl43353 | Primosomal protein N' (replication factor Y) - superfamily II helicase [Replication, ... |
7-90 | 1.08e-16 | |||
Primosomal protein N' (replication factor Y) - superfamily II helicase [Replication, recombination and repair]; The actual alignment was detected with superfamily member COG1198: Pssm-ID: 440811 [Multi-domain] Cd Length: 728 Bit Score: 73.23 E-value: 1.08e-16
|
|||||||
Name | Accession | Description | Interval | E-value | |||
PriA | COG1198 | Primosomal protein N' (replication factor Y) - superfamily II helicase [Replication, ... |
7-90 | 1.08e-16 | |||
Primosomal protein N' (replication factor Y) - superfamily II helicase [Replication, recombination and repair]; Pssm-ID: 440811 [Multi-domain] Cd Length: 728 Bit Score: 73.23 E-value: 1.08e-16
|
|||||||
PriA_C | pfam18074 | Primosomal protein N C-terminal domain; This is the C-terminal domain found in PriA DNA ... |
7-88 | 2.56e-16 | |||
Primosomal protein N C-terminal domain; This is the C-terminal domain found in PriA DNA helicase, a multifunctional enzyme that mediates the process of restarting prematurely terminated DNA replication reactions in bacteria. The C-terminal domain (CTD) bears similarity to the S10 subunit which binds branched rRNA within the bacterial ribosome. The C-terminal domain is part of the helicase domain of PriA proteins. It acts together with the 3' DNA-binding domain to form a site for binding ssDNA-binding protein (SSB). Pssm-ID: 465633 [Multi-domain] Cd Length: 96 Bit Score: 67.25 E-value: 2.56e-16
|
|||||||
PRK05580 | PRK05580 | primosome assembly protein PriA; Validated |
7-91 | 8.52e-13 | |||
primosome assembly protein PriA; Validated Pssm-ID: 235514 [Multi-domain] Cd Length: 679 Bit Score: 62.10 E-value: 8.52e-13
|
|||||||
priA | TIGR00595 | primosomal protein N'; All proteins in this family for which functions are known are ... |
21-89 | 1.47e-10 | |||
primosomal protein N'; All proteins in this family for which functions are known are components of the primosome which is involved in replication, repair, and recombination.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair] Pssm-ID: 273162 [Multi-domain] Cd Length: 505 Bit Score: 55.47 E-value: 1.47e-10
|
|||||||
Name | Accession | Description | Interval | E-value | |||
PriA | COG1198 | Primosomal protein N' (replication factor Y) - superfamily II helicase [Replication, ... |
7-90 | 1.08e-16 | |||
Primosomal protein N' (replication factor Y) - superfamily II helicase [Replication, recombination and repair]; Pssm-ID: 440811 [Multi-domain] Cd Length: 728 Bit Score: 73.23 E-value: 1.08e-16
|
|||||||
PriA_C | pfam18074 | Primosomal protein N C-terminal domain; This is the C-terminal domain found in PriA DNA ... |
7-88 | 2.56e-16 | |||
Primosomal protein N C-terminal domain; This is the C-terminal domain found in PriA DNA helicase, a multifunctional enzyme that mediates the process of restarting prematurely terminated DNA replication reactions in bacteria. The C-terminal domain (CTD) bears similarity to the S10 subunit which binds branched rRNA within the bacterial ribosome. The C-terminal domain is part of the helicase domain of PriA proteins. It acts together with the 3' DNA-binding domain to form a site for binding ssDNA-binding protein (SSB). Pssm-ID: 465633 [Multi-domain] Cd Length: 96 Bit Score: 67.25 E-value: 2.56e-16
|
|||||||
PRK05580 | PRK05580 | primosome assembly protein PriA; Validated |
7-91 | 8.52e-13 | |||
primosome assembly protein PriA; Validated Pssm-ID: 235514 [Multi-domain] Cd Length: 679 Bit Score: 62.10 E-value: 8.52e-13
|
|||||||
priA | TIGR00595 | primosomal protein N'; All proteins in this family for which functions are known are ... |
21-89 | 1.47e-10 | |||
primosomal protein N'; All proteins in this family for which functions are known are components of the primosome which is involved in replication, repair, and recombination.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair] Pssm-ID: 273162 [Multi-domain] Cd Length: 505 Bit Score: 55.47 E-value: 1.47e-10
|
|||||||
Blast search parameters | ||||
|