NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|2500331438|ref|WP_281253392|]
View 

glycosyltransferase family 2 protein [Sphingomonas guangdongensis]

Protein Classification

glycosyltransferase family 2 protein( domain architecture ID 11421525)

glycosyltransferase family 2 protein catalyzes the transfer of saccharide moieties from a donor to an acceptor to form glycosidic bonds

CAZY:  GT2
EC:  2.4.-.-
Gene Ontology:  GO:0016757
PubMed:  16037492|18518825

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
WcaA COG0463
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
1-189 1.21e-18

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


:

Pssm-ID: 440231 [Multi-domain]  Cd Length: 208  Bit Score: 82.06  E-value: 1.21e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438   1 MCTYRRPG-VAATLQSLAAQvlpTGVSMRVIVADNDDEPSARERVLAAGAGL-TLHYVHAPA-RNISVARNACLEAATAP 77
Cdd:COG0463     8 IPTYNEEEyLEEALESLLAQ---TYPDFEIIVVDDGSTDGTAEILRELAAKDpRIRVIRLERnRGKGAARNAGLAAARGD 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438  78 AIAFLDDDEVAPPTWLRALLTTMEQTGAPIVLGpVRAQYGDDLPAWLKAADLHSTRPAIRRDGTIDTGYscnVLFRRDIL 157
Cdd:COG0463    85 YIAFLDADDQLDPEKLEELVAALEEGPADLVYG-SRLIREGESDLRRLGSRLFNLVRLLTNLPDSTSGF---RLFRREVL 160
                         170       180       190
                  ....*....|....*....|....*....|..
gi 2500331438 158 NGLRFDPARGVtggedDAFFSQLYRRGHRIAF 189
Cdd:COG0463   161 EELGFDEGFLE-----DTELLRALRHGFRIAE 187
 
Name Accession Description Interval E-value
WcaA COG0463
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
1-189 1.21e-18

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440231 [Multi-domain]  Cd Length: 208  Bit Score: 82.06  E-value: 1.21e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438   1 MCTYRRPG-VAATLQSLAAQvlpTGVSMRVIVADNDDEPSARERVLAAGAGL-TLHYVHAPA-RNISVARNACLEAATAP 77
Cdd:COG0463     8 IPTYNEEEyLEEALESLLAQ---TYPDFEIIVVDDGSTDGTAEILRELAAKDpRIRVIRLERnRGKGAARNAGLAAARGD 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438  78 AIAFLDDDEVAPPTWLRALLTTMEQTGAPIVLGpVRAQYGDDLPAWLKAADLHSTRPAIRRDGTIDTGYscnVLFRRDIL 157
Cdd:COG0463    85 YIAFLDADDQLDPEKLEELVAALEEGPADLVYG-SRLIREGESDLRRLGSRLFNLVRLLTNLPDSTSGF---RLFRREVL 160
                         170       180       190
                  ....*....|....*....|....*....|..
gi 2500331438 158 NGLRFDPARGVtggedDAFFSQLYRRGHRIAF 189
Cdd:COG0463   161 EELGFDEGFLE-----DTELLRALRHGFRIAE 187
Glycos_transf_2 pfam00535
Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, ...
1-157 1.87e-15

Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.


Pssm-ID: 425738 [Multi-domain]  Cd Length: 166  Bit Score: 72.43  E-value: 1.87e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438   1 MCTY-RRPGVAATLQSLAAQVLPTgvsMRVIVADNDDEPSARERVLA-AGAGLTLHYVHAPARN-ISVARNACLEAATAP 77
Cdd:pfam00535   4 IPTYnEEKYLLETLESLLNQTYPN---FEIIVVDDGSTDGTVEIAEEyAKKDPRVRVIRLPENRgKAGARNAGLRAATGD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438  78 AIAFLDDDEVAPPTWLRALLTTMEQTGAPIVLGPVRAQYGDDLPAWLKAADLHSTRPAIRRDGTIDTG----YSCNVLFR 153
Cdd:pfam00535  81 YIAFLDADDEVPPDWLEKLVEALEEDGADVVVGSRYVIFGETGEYRRASRITLSRLPFFLGLRLLGLNlpflIGGFALYR 160

                  ....
gi 2500331438 154 RDIL 157
Cdd:pfam00535 161 REAL 164
Succinoglycan_BP_ExoA cd02525
ExoA is involved in the biosynthesis of succinoglycan; Succinoglycan Biosynthesis Protein ExoA ...
9-217 7.05e-15

ExoA is involved in the biosynthesis of succinoglycan; Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.


Pssm-ID: 133016 [Multi-domain]  Cd Length: 249  Bit Score: 72.26  E-value: 7.05e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438   9 VAATLQSLAAQVLPTGvSMRVIVADNDDEPSARERVLA-AGAGLTLHYVHAPARNISVARNACLEAATAPAIAFLDDDEV 87
Cdd:cd02525    15 IEELLESLLNQSYPKD-LIEIIVVDGGSTDGTREIVQEyAAKDPRIRLIDNPKRIQSAGLNIGIRNSRGDIIIRVDAHAV 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438  88 APPTWLRALLTTMEQTGAPIVLGPVRAQYGDDLpaWLKAADLHSTRPAI----RRDGTIDTGY---SCNVLFRRDILN-- 158
Cdd:cd02525    94 YPKDYILELVEALKRTGADNVGGPMETIGESKF--QKAIAVAQSSPLGSggsaYRGGAVKIGYvdtVHHGAYRREVFEkv 171
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2500331438 159 GLrFDParGVTGGEDDAFFSQLYRRGHRIAFAADAMLEEVVpphRAQLRWLLRRAFRNG 217
Cdd:cd02525   172 GG-FDE--SLVRNEDAELNYRLRKAGYKIWLSPDIRVYYYP---RSTLKKLARQYFRYG 224
mycofact_glyco TIGR03965
mycofactocin system glycosyltransferase; Members of this protein family are putative ...
5-214 1.47e-11

mycofactocin system glycosyltransferase; Members of this protein family are putative glycosyltransferases, members of pfam00535 (glycosyl transferase family 2). Members appear mostly in the Actinobacteria, where they appear to be part of a system for converting a precursor peptide (TIGR03969) into a novel redox carrier designated mycofactocin. A radical SAM enzyme, TIGR03962, is a proposed to be a key maturase for mycofactocin.


Pssm-ID: 274884 [Multi-domain]  Cd Length: 466  Bit Score: 64.40  E-value: 1.47e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438   5 RRPGVAATLQSLAAQVLPTGVSMRVIVADNDDEPSARERVLAAGAGLTLhYVHAPARNISVARNACLEAATAPAIAFLDD 84
Cdd:TIGR03965  85 RPAGLARLLAALLALDYPRDRLEVIVVDDGSEDPVPTRAARGARLPVRV-IRHPRRQGPAAARNAGARAARTEFVAFTDS 163
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438  85 DEVAPPTWLRALLTTMEQTGAPIVLGPVRAQYGDDLP-----AWLKAADLHSTRPAIRRDGTIDTGYSCNVLFRRDILNG 159
Cdd:TIGR03965 164 DVVPRPGWLRALLAHFDDPGVALVAPRVVALPAADTRlaryeAVRSSLDLGPEEAVVRPRGPVSYVPSAALLVRRRALLE 243
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2500331438 160 LR-FDPARGVtgGEDDAFFSQLYRRGHRIAFAADAMleeVVPPHRAQLR-WLLRRAF 214
Cdd:TIGR03965 244 VGgFDERLEV--GEDVDLCWRLCEAGGRVRYEPAAV---VAHDHRTRLWpWLARRAF 295
PRK10073 PRK10073
putative glycosyl transferase; Provisional
11-102 9.47e-03

putative glycosyl transferase; Provisional


Pssm-ID: 182223 [Multi-domain]  Cd Length: 328  Bit Score: 36.95  E-value: 9.47e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438  11 ATLQSLAAQVLPtgvSMRVIVADNDDEPSARERVLAAGAGLT-LHYVHAPARNISVARNACLEAATAPAIAFLDDDEVAP 89
Cdd:PRK10073   23 AFMESLIAQTWT---ALEIIIVNDGSTDNSVEIAKHYAENYPhVRLLHQANAGVSVARNTGLAVATGKYVAFPDADDVVY 99
                          90
                  ....*....|...
gi 2500331438  90 PTWLRALLTTMEQ 102
Cdd:PRK10073  100 PTMYETLMTMALE 112
 
Name Accession Description Interval E-value
WcaA COG0463
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
1-189 1.21e-18

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440231 [Multi-domain]  Cd Length: 208  Bit Score: 82.06  E-value: 1.21e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438   1 MCTYRRPG-VAATLQSLAAQvlpTGVSMRVIVADNDDEPSARERVLAAGAGL-TLHYVHAPA-RNISVARNACLEAATAP 77
Cdd:COG0463     8 IPTYNEEEyLEEALESLLAQ---TYPDFEIIVVDDGSTDGTAEILRELAAKDpRIRVIRLERnRGKGAARNAGLAAARGD 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438  78 AIAFLDDDEVAPPTWLRALLTTMEQTGAPIVLGpVRAQYGDDLPAWLKAADLHSTRPAIRRDGTIDTGYscnVLFRRDIL 157
Cdd:COG0463    85 YIAFLDADDQLDPEKLEELVAALEEGPADLVYG-SRLIREGESDLRRLGSRLFNLVRLLTNLPDSTSGF---RLFRREVL 160
                         170       180       190
                  ....*....|....*....|....*....|..
gi 2500331438 158 NGLRFDPARGVtggedDAFFSQLYRRGHRIAF 189
Cdd:COG0463   161 EELGFDEGFLE-----DTELLRALRHGFRIAE 187
BcsA COG1215
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1, ...
1-225 2.02e-17

Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility];


Pssm-ID: 440828 [Multi-domain]  Cd Length: 303  Bit Score: 80.56  E-value: 2.02e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438   1 MCTYRRP-GVAATLQSLAAQVLPTGvSMRVIVADNDDEPSARERVLAAGAGLT-LHYVHAPAR-NISVARNACLEAATAP 77
Cdd:COG1215    35 IPAYNEEaVIEETLRSLLAQDYPKE-KLEVIVVDDGSTDETAEIARELAAEYPrVRVIERPENgGKAAALNAGLKAARGD 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438  78 AIAFLDDDEVAPPTWLRALLTTMEQTGAPIVlgpvraqygddlpawlkaadlhstrpairrdgtidtgySCNVLFRRDIL 157
Cdd:COG1215   114 IVVFLDADTVLDPDWLRRLVAAFADPGVGAS--------------------------------------GANLAFRREAL 155
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2500331438 158 NGLR-FDPargVTGGEDDAFFSQLYRRGHRIAFAADAMLEEVVPPHraqLRWLLRRAFRNGQTYASIRL 225
Cdd:COG1215   156 EEVGgFDE---DTLGEDLDLSLRLLRAGYRIVYVPDAVVYEEAPET---LRALFRQRRRWARGGLQLLL 218
Glycos_transf_2 pfam00535
Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, ...
1-157 1.87e-15

Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.


Pssm-ID: 425738 [Multi-domain]  Cd Length: 166  Bit Score: 72.43  E-value: 1.87e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438   1 MCTY-RRPGVAATLQSLAAQVLPTgvsMRVIVADNDDEPSARERVLA-AGAGLTLHYVHAPARN-ISVARNACLEAATAP 77
Cdd:pfam00535   4 IPTYnEEKYLLETLESLLNQTYPN---FEIIVVDDGSTDGTVEIAEEyAKKDPRVRVIRLPENRgKAGARNAGLRAATGD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438  78 AIAFLDDDEVAPPTWLRALLTTMEQTGAPIVLGPVRAQYGDDLPAWLKAADLHSTRPAIRRDGTIDTG----YSCNVLFR 153
Cdd:pfam00535  81 YIAFLDADDEVPPDWLEKLVEALEEDGADVVVGSRYVIFGETGEYRRASRITLSRLPFFLGLRLLGLNlpflIGGFALYR 160

                  ....
gi 2500331438 154 RDIL 157
Cdd:pfam00535 161 REAL 164
WcaE COG1216
Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];
1-234 2.65e-15

Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];


Pssm-ID: 440829 [Multi-domain]  Cd Length: 202  Bit Score: 72.72  E-value: 2.65e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438   1 MCTYRRPG-VAATLQSLAAQvlpTGVSMRVIVADNDDEPSARErVLAAGAGLTLHYVHAPA-RNISVARNACLEAATAPA 78
Cdd:COG1216     9 IPTYNRPElLRRCLESLLAQ---TYPPFEVIVVDNGSTDGTAE-LLAALAFPRVRVIRNPEnLGFAAARNLGLRAAGGDY 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438  79 IAFLDDDEVAPPTWLRALLTTmeqtgapivlgpvraqygddlpawlkaadlhstrpairrdgtidtgysCNVLFRRDILN 158
Cdd:COG1216    85 LLFLDDDTVVEPDWLERLLAA------------------------------------------------ACLLIRREVFE 116
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2500331438 159 GL-RFDPARGVtGGEDDAFFSQLYRRGHRIAFAADAMleeVVPPHRAQLRWLLRRAF--RNGQTYASIRLAAGDWRIAL 234
Cdd:COG1216   117 EVgGFDERFFL-YGEDVDLCLRLRKAGYRIVYVPDAV---VYHLGGASSGPLLRAYYlgRNRLLFLRKHGPRPLLRLAL 191
Succinoglycan_BP_ExoA cd02525
ExoA is involved in the biosynthesis of succinoglycan; Succinoglycan Biosynthesis Protein ExoA ...
9-217 7.05e-15

ExoA is involved in the biosynthesis of succinoglycan; Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.


Pssm-ID: 133016 [Multi-domain]  Cd Length: 249  Bit Score: 72.26  E-value: 7.05e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438   9 VAATLQSLAAQVLPTGvSMRVIVADNDDEPSARERVLA-AGAGLTLHYVHAPARNISVARNACLEAATAPAIAFLDDDEV 87
Cdd:cd02525    15 IEELLESLLNQSYPKD-LIEIIVVDGGSTDGTREIVQEyAAKDPRIRLIDNPKRIQSAGLNIGIRNSRGDIIIRVDAHAV 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438  88 APPTWLRALLTTMEQTGAPIVLGPVRAQYGDDLpaWLKAADLHSTRPAI----RRDGTIDTGY---SCNVLFRRDILN-- 158
Cdd:cd02525    94 YPKDYILELVEALKRTGADNVGGPMETIGESKF--QKAIAVAQSSPLGSggsaYRGGAVKIGYvdtVHHGAYRREVFEkv 171
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2500331438 159 GLrFDParGVTGGEDDAFFSQLYRRGHRIAFAADAMLEEVVpphRAQLRWLLRRAFRNG 217
Cdd:cd02525   172 GG-FDE--SLVRNEDAELNYRLRKAGYKIWLSPDIRVYYYP---RSTLKKLARQYFRYG 224
Glyco_tranf_GTA_type cd00761
Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a ...
1-189 1.01e-12

Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.


Pssm-ID: 132997 [Multi-domain]  Cd Length: 156  Bit Score: 64.45  E-value: 1.01e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438   1 MCTY-RRPGVAATLQSLAAQVLPtgvSMRVIVADNDDEPSARERVLAAGAG--LTLHYVHAPARNISVARNACLEAATAP 77
Cdd:cd00761     3 IPAYnEEPYLERCLESLLAQTYP---NFEVIVVDDGSTDGTLEILEEYAKKdpRVIRVINEENQGLAAARNAGLKAARGE 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438  78 AIAFLDDDEVAPPTWLRALL-TTMEQTGAPIVLGPvraqygddlpawlkaadlhstrpairrdgtidtgysCNVLFRRDI 156
Cdd:cd00761    80 YILFLDADDLLLPDWLERLVaELLADPEADAVGGP------------------------------------GNLLFRREL 123
                         170       180       190
                  ....*....|....*....|....*....|...
gi 2500331438 157 LNGLRFDPARGVTGGEDDAFFSQLYRRGHRIAF 189
Cdd:cd00761   124 LEEIGGFDEALLSGEEDDDFLLRLLRGGKVAFR 156
mycofact_glyco TIGR03965
mycofactocin system glycosyltransferase; Members of this protein family are putative ...
5-214 1.47e-11

mycofactocin system glycosyltransferase; Members of this protein family are putative glycosyltransferases, members of pfam00535 (glycosyl transferase family 2). Members appear mostly in the Actinobacteria, where they appear to be part of a system for converting a precursor peptide (TIGR03969) into a novel redox carrier designated mycofactocin. A radical SAM enzyme, TIGR03962, is a proposed to be a key maturase for mycofactocin.


Pssm-ID: 274884 [Multi-domain]  Cd Length: 466  Bit Score: 64.40  E-value: 1.47e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438   5 RRPGVAATLQSLAAQVLPTGVSMRVIVADNDDEPSARERVLAAGAGLTLhYVHAPARNISVARNACLEAATAPAIAFLDD 84
Cdd:TIGR03965  85 RPAGLARLLAALLALDYPRDRLEVIVVDDGSEDPVPTRAARGARLPVRV-IRHPRRQGPAAARNAGARAARTEFVAFTDS 163
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438  85 DEVAPPTWLRALLTTMEQTGAPIVLGPVRAQYGDDLP-----AWLKAADLHSTRPAIRRDGTIDTGYSCNVLFRRDILNG 159
Cdd:TIGR03965 164 DVVPRPGWLRALLAHFDDPGVALVAPRVVALPAADTRlaryeAVRSSLDLGPEEAVVRPRGPVSYVPSAALLVRRRALLE 243
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2500331438 160 LR-FDPARGVtgGEDDAFFSQLYRRGHRIAFAADAMleeVVPPHRAQLR-WLLRRAF 214
Cdd:TIGR03965 244 VGgFDERLEV--GEDVDLCWRLCEAGGRVRYEPAAV---VAHDHRTRLWpWLARRAF 295
Glyco_tranf_2_3 pfam13641
Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include ...
2-212 7.54e-10

Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis.


Pssm-ID: 433372 [Multi-domain]  Cd Length: 230  Bit Score: 57.77  E-value: 7.54e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438   2 CTYRRPGV-AATLQSLAAQVLPtgvSMRVIVADNDDEPSARERVLAAGAGL------TLHYVHAPARNI-SVARNACLEA 73
Cdd:pfam13641   9 PAFNEDSVlGRVLEAILAQPYP---PVEVVVVVNPSDAETLDVAEEIAARFpdvrlrVIRNARLLGPTGkSRGLNHGFRA 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438  74 ATAPAIAFLDDDEVAPPTWLRALLTTMEQTGAPIVLGPVRAQYGDDLPAWLKAADL---HSTRPAIRRDGTIDTGYSCNV 150
Cdd:pfam13641  86 VKSDLVVLHDDDSVLHPGTLKKYVQYFDSPKVGAVGTPVFSLNRSTMLSALGALEFalrHLRMMSLRLALGVLPLSGAGS 165
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2500331438 151 LFRRDIL-NGLRFDPARGVTggeDDAFFS-QLYRRGHRIAFAADAMLEEVVPPHRAQLRWLLRR 212
Cdd:pfam13641 166 AIRREVLkELGLFDPFFLLG---DDKSLGrRLRRHGWRVAYAPDAAVRTVFPTYLAASIKQRAR 226
GT_2_like_c cd04186
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
1-102 3.59e-05

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133029 [Multi-domain]  Cd Length: 166  Bit Score: 43.32  E-value: 3.59e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438   1 MCTYRRPGV-AATLQSLAAQvlpTGVSMRVIVADNDDEPSARERVLAAGAGLTLHYvhaPARNISVAR--NACLEAATAP 77
Cdd:cd04186     3 IVNYNSLEYlKACLDSLLAQ---TYPDFEVIVVDNASTDGSVELLRELFPEVRLIR---NGENLGFGAgnNQGIREAKGD 76
                          90       100
                  ....*....|....*....|....*
gi 2500331438  78 AIAFLDDDEVAPPTWLRALLTTMEQ 102
Cdd:cd04186    77 YVLLLNPDTVVEPGALLELLDAAEQ 101
Glyco_trans_2_3 pfam13632
Glycosyl transferase family group 2; Members of this family of prokaryotic proteins include ...
79-235 1.65e-04

Glycosyl transferase family group 2; Members of this family of prokaryotic proteins include putative glucosyltransferases, which are involved in bacterial capsule biosynthesis.


Pssm-ID: 433365 [Multi-domain]  Cd Length: 192  Bit Score: 41.55  E-value: 1.65e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438  79 IAFLDDDEVAPPTWLRALLTTMEQTGAPIVLGPVRAQYGDDLPAWLKAAdlhSTRPAIRRDGTIDTGYSC-------NVL 151
Cdd:pfam13632   2 ILLLDADTVLPPDCLLGIANEMASPEVAIIQGPILPMNVGNYLEELAAL---FFADDHGKSIPVRMALGRvlpfvgsGAF 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438 152 FRRDILNGLRFDPARGVTggeDDAFFSQ-LYRRGHRIAFAADAMLEEVVPP----HRAQ-LRW----LLRRAFRNGQTYA 221
Cdd:pfam13632  79 LRRSALQEVGGWDDGSVS---EDFDFGLrLQRAGYRVRFAPYSAVYEKSPLtfrdFLRQrRRWaygcLLILLIRLLGYLG 155
                         170
                  ....*....|....
gi 2500331438 222 SIRLAAGDWRIALA 235
Cdd:pfam13632 156 TLLWSGLPLALLLL 169
CESA_CelA_like cd06421
CESA_CelA_like are involved in the elongation of the glucan chain of cellulose; Family of ...
27-208 3.77e-04

CESA_CelA_like are involved in the elongation of the glucan chain of cellulose; Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.


Pssm-ID: 133043 [Multi-domain]  Cd Length: 234  Bit Score: 41.02  E-value: 3.77e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438  27 MRVIVADNDDEPSARERVLAAGAGLTLHYV------HAPARNIsvarNACLEAATAPAIAFLDDDEVAPPTWLRALLTTM 100
Cdd:cd06421    34 LRVYVLDDGRRPELRALAAELGVEYGYRYLtrpdnrHAKAGNL----NNALAHTTGDFVAILDADHVPTPDFLRRTLGYF 109
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438 101 ---EQTGapIVLGP-----VRAQYGDDLPAWLKAADLHSTRPAiRRDGTiDTGYSC--NVLFRRDILNGLRFDPARGVTg 170
Cdd:cd06421   110 lddPKVA--LVQTPqffynPDPFDWLADGAPNEQELFYGVIQP-GRDRW-GAAFCCgsGAVVRREALDEIGGFPTDSVT- 184
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 2500331438 171 gEDDAFFSQLYRRGHRIAFAADAMLEEVVPP-----HRAQLRW 208
Cdd:cd06421   185 -EDLATSLRLHAKGWRSVYVPEPLAAGLAPEtlaayIKQRLRW 226
Glyco_transf_21 pfam13506
Glycosyl transferase family 21; This is a family of ceramide beta-glucosyltransferases - EC:2. ...
71-215 9.87e-04

Glycosyl transferase family 21; This is a family of ceramide beta-glucosyltransferases - EC:2.4.1.80.


Pssm-ID: 433264 [Multi-domain]  Cd Length: 173  Bit Score: 39.19  E-value: 9.87e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438  71 LEAATAPAIAFLDDDEVAPPTWLRALLTTMEQTGAPIVLGPVRAQYGDDLPAWLKAAdLHSTRPAI-----RRDGTIdTG 145
Cdd:pfam13506  26 LEAAKYDLLVISDSDIRVPPDYLRDLLAPLADPKVGLVTSPPVGSDPKGLAAALEAA-FFNTLAGVlqaalSGIGFA-VG 103
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2500331438 146 YSCnvLFRRDILN---GLRfdpARGVTGGEDDAFFSQLYRRGHRIAFaADAMLEEVVPPHRAQLRWLLRRAFR 215
Cdd:pfam13506 104 MSM--AFRRADLErigGFE---ALADYLAEDYALGKLLRAAGLKVVL-SPRPILQTSGPRRTSFRAFMARQLR 170
GT_2_like_e cd04192
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
9-132 6.78e-03

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133035 [Multi-domain]  Cd Length: 229  Bit Score: 37.27  E-value: 6.78e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438   9 VAATLQSLAAQVLPTGvSMRVIVADNDDEPSARERVLAAGA--GLTLHYVHAPARNISVARNA---CLEAATAPAIAFLD 83
Cdd:cd04192    12 LPRLLQSLSALDYPKE-KFEVILVDDHSTDGTVQILEFAAAkpNFQLKILNNSRVSISGKKNAlttAIKAAKGDWIVTTD 90
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 2500331438  84 DDEVAPPTWLRALLTTMEQTGAPIVLGPVRAQYGDDLPAWLKAADLHST 132
Cdd:cd04192    91 ADCVVPSNWLLTFVAFIQKEQIGLVAGPVIYFKGKSLLAKFQRLDWLSL 139
PRK10073 PRK10073
putative glycosyl transferase; Provisional
11-102 9.47e-03

putative glycosyl transferase; Provisional


Pssm-ID: 182223 [Multi-domain]  Cd Length: 328  Bit Score: 36.95  E-value: 9.47e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2500331438  11 ATLQSLAAQVLPtgvSMRVIVADNDDEPSARERVLAAGAGLT-LHYVHAPARNISVARNACLEAATAPAIAFLDDDEVAP 89
Cdd:PRK10073   23 AFMESLIAQTWT---ALEIIIVNDGSTDNSVEIAKHYAENYPhVRLLHQANAGVSVARNTGLAVATGKYVAFPDADDVVY 99
                          90
                  ....*....|...
gi 2500331438  90 PTWLRALLTTMEQ 102
Cdd:PRK10073  100 PTMYETLMTMALE 112
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH