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Conserved domains on  [gi|2519300237|ref|WP_284943378|]
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DUF4158 domain-containing protein, partial [Enterococcus faecalis]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4158 super family cl18663
Domain of unknown function (DUF4158); The exact function of this domain is not clear, but it ...
 1-73 1.70e-24

Domain of unknown function (DUF4158); The exact function of this domain is not clear, but it frequently occurs as an N-terminal region of transposase 3 or IS3 family of insertion elements.


The actual alignment was detected with superfamily member pfam13700:

Pssm-ID: 433413  Cd Length: 165  Bit Score: 89.54  E-value: 1.70e-24
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2519300237   1 TKLGFAVQLGTVRFLGTFFTDFSKIPLEVIIYLANQLSIDPREFDSY-SRKMTISQHAQLIKERYSYRNFQDSD 73
Cdd:pfam13700  43 NRLGFAVQLCYFRYPGRFLSDPEDVPAAVVEYIAEQLGLDPSALARYaRREQTRREHLAEIRELLGYRPFTDSD 116
 
Name Accession Description Interval E-value
DUF4158 pfam13700
Domain of unknown function (DUF4158); The exact function of this domain is not clear, but it ...
 1-73 1.70e-24

Domain of unknown function (DUF4158); The exact function of this domain is not clear, but it frequently occurs as an N-terminal region of transposase 3 or IS3 family of insertion elements.


Pssm-ID: 433413  Cd Length: 165  Bit Score: 89.54  E-value: 1.70e-24
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2519300237   1 TKLGFAVQLGTVRFLGTFFTDFSKIPLEVIIYLANQLSIDPREFDSY-SRKMTISQHAQLIKERYSYRNFQDSD 73
Cdd:pfam13700  43 NRLGFAVQLCYFRYPGRFLSDPEDVPAAVVEYIAEQLGLDPSALARYaRREQTRREHLAEIRELLGYRPFTDSD 116
transpos_Tn3 NF033527
Tn3 family transposase;
1-73 8.25e-20

Tn3 family transposase;


Pssm-ID: 468061 [Multi-domain]  Cd Length: 954  Bit Score: 81.16  E-value: 8.25e-20
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2519300237   1 TKLGFAVQLGTVRFLGTFFTDFSKIPLEVIIYLANQLSIDPREFDSYS-RKMTISQHAQLIKERYSYRNFQDSD 73
Cdd:NF033527   28 NRLGFALQLGYLRYPGRFLGPGEEIPPGVLRFVAEQLGIGPDLLAEYAtRGRTRYEHRAEIRELLGYRLFDESD 101
 
Name Accession Description Interval E-value
DUF4158 pfam13700
Domain of unknown function (DUF4158); The exact function of this domain is not clear, but it ...
 1-73 1.70e-24

Domain of unknown function (DUF4158); The exact function of this domain is not clear, but it frequently occurs as an N-terminal region of transposase 3 or IS3 family of insertion elements.


Pssm-ID: 433413  Cd Length: 165  Bit Score: 89.54  E-value: 1.70e-24
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2519300237   1 TKLGFAVQLGTVRFLGTFFTDFSKIPLEVIIYLANQLSIDPREFDSY-SRKMTISQHAQLIKERYSYRNFQDSD 73
Cdd:pfam13700  43 NRLGFAVQLCYFRYPGRFLSDPEDVPAAVVEYIAEQLGLDPSALARYaRREQTRREHLAEIRELLGYRPFTDSD 116
transpos_Tn3 NF033527
Tn3 family transposase;
1-73 8.25e-20

Tn3 family transposase;


Pssm-ID: 468061 [Multi-domain]  Cd Length: 954  Bit Score: 81.16  E-value: 8.25e-20
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2519300237   1 TKLGFAVQLGTVRFLGTFFTDFSKIPLEVIIYLANQLSIDPREFDSYS-RKMTISQHAQLIKERYSYRNFQDSD 73
Cdd:NF033527   28 NRLGFALQLGYLRYPGRFLGPGEEIPPGVLRFVAEQLGIGPDLLAEYAtRGRTRYEHRAEIRELLGYRLFDESD 101
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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