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Conserved domains on  [gi|2580548622|ref|WP_310902169|]
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BREX protein BrxB domain-containing protein [Halomicroarcula onubensis]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
BrxB super family cl08489
BREX protein BrxB; This family includes BREX protein BrxB from Bacillus cereus, which is part ...
 91-180 1.63e-07

BREX protein BrxB; This family includes BREX protein BrxB from Bacillus cereus, which is part of a type 1 BREX (bacteriophage exclusion) system, a system that provides immunity against bacteriophage, which allows phage adsorption but prevents phage DNA replication, without degradation of the phage DNA. The exact function of BrxB is not clear.


The actual alignment was detected with superfamily member pfam08747:

Pssm-ID: 430188  Cd Length: 119  Bit Score: 47.89  E-value: 1.63e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2580548622  91 ERIEETMQDRL--AEELVEEmISNEIDDDrlgtQQHVVLLLNLGSLYPFTRASELLDELDRRnvrsTIGVP----FPGDV 164
Cdd:pfam08747  31 DALLKALQSVLnpEDLIAPK-IKERIEEH----DQDIVFLTGVGKVYPFIRSHTLLNNLHPV----TKNVPvvmfYPGEY 101

                          90
                  ....*....|....*..
gi 2580548622 165 VGGKLSFFGG-DSRHYY 180
Cdd:pfam08747 102 DGQSLSLFGElKDDNYY 118
 
Name Accession Description Interval E-value
BrxB pfam08747
BREX protein BrxB; This family includes BREX protein BrxB from Bacillus cereus, which is part ...
 91-180 1.63e-07

BREX protein BrxB; This family includes BREX protein BrxB from Bacillus cereus, which is part of a type 1 BREX (bacteriophage exclusion) system, a system that provides immunity against bacteriophage, which allows phage adsorption but prevents phage DNA replication, without degradation of the phage DNA. The exact function of BrxB is not clear.


Pssm-ID: 430188  Cd Length: 119  Bit Score: 47.89  E-value: 1.63e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2580548622  91 ERIEETMQDRL--AEELVEEmISNEIDDDrlgtQQHVVLLLNLGSLYPFTRASELLDELDRRnvrsTIGVP----FPGDV 164
Cdd:pfam08747  31 DALLKALQSVLnpEDLIAPK-IKERIEEH----DQDIVFLTGVGKVYPFIRSHTLLNNLHPV----TKNVPvvmfYPGEY 101

                          90
                  ....*....|....*..
gi 2580548622 165 VGGKLSFFGG-DSRHYY 180
Cdd:pfam08747 102 DGQSLSLFGElKDDNYY 118
 
Name Accession Description Interval E-value
BrxB pfam08747
BREX protein BrxB; This family includes BREX protein BrxB from Bacillus cereus, which is part ...
 91-180 1.63e-07

BREX protein BrxB; This family includes BREX protein BrxB from Bacillus cereus, which is part of a type 1 BREX (bacteriophage exclusion) system, a system that provides immunity against bacteriophage, which allows phage adsorption but prevents phage DNA replication, without degradation of the phage DNA. The exact function of BrxB is not clear.


Pssm-ID: 430188  Cd Length: 119  Bit Score: 47.89  E-value: 1.63e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2580548622  91 ERIEETMQDRL--AEELVEEmISNEIDDDrlgtQQHVVLLLNLGSLYPFTRASELLDELDRRnvrsTIGVP----FPGDV 164
Cdd:pfam08747  31 DALLKALQSVLnpEDLIAPK-IKERIEEH----DQDIVFLTGVGKVYPFIRSHTLLNNLHPV----TKNVPvvmfYPGEY 101

                          90
                  ....*....|....*..
gi 2580548622 165 VGGKLSFFGG-DSRHYY 180
Cdd:pfam08747 102 DGQSLSLFGElKDDNYY 118
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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