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Conserved domains on  [gi|2712798462|ref|WP_339926906|]
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MULTISPECIES: DUF2256 domain-containing protein [unclassified Cobetia]

Protein Classification

DUF2256 domain-containing protein( domain architecture ID 10008508)

DUF2256 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG4338 COG4338
Uncharacterized conserved protein, DUF2256 family [Function unknown];
17-67 2.53e-22

Uncharacterized conserved protein, DUF2256 family [Function unknown];


:

Pssm-ID: 443479  Cd Length: 52  Bit Score: 80.43  E-value: 2.53e-22
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 2712798462 17 SMHRKPPLPSKLCQTCQRPFTWRKKWQDCWDDVRHCSQRCRRNARQLAREA 67
Cdd:COG4338    2 PRRKKSDLPSKICAVCGRPFTWRKKWARDWDEVKYCSERCRRNKKKAGDSA 52
 
Name Accession Description Interval E-value
COG4338 COG4338
Uncharacterized conserved protein, DUF2256 family [Function unknown];
17-67 2.53e-22

Uncharacterized conserved protein, DUF2256 family [Function unknown];


Pssm-ID: 443479  Cd Length: 52  Bit Score: 80.43  E-value: 2.53e-22
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 2712798462 17 SMHRKPPLPSKLCQTCQRPFTWRKKWQDCWDDVRHCSQRCRRNARQLAREA 67
Cdd:COG4338    2 PRRKKSDLPSKICAVCGRPFTWRKKWARDWDEVKYCSERCRRNKKKAGDSA 52
DUF2256 pfam10013
Uncharacterized protein conserved in bacteria (DUF2256); Members of this family of ...
 20-59 4.40e-19

Uncharacterized protein conserved in bacteria (DUF2256); Members of this family of hypothetical bacterial proteins have no known function.


Pssm-ID: 462942  Cd Length: 40  Bit Score: 71.87  E-value: 4.40e-19
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 2712798462 20 RKPPLPSKLCQTCQRPFTWRKKWQDCWDDVRHCSQRCRRN 59
Cdd:pfam10013  1 KKSDLPSKICAVCGRPFTWRKKWARCWDEVKYCSDRCRRA 40
 
Name Accession Description Interval E-value
COG4338 COG4338
Uncharacterized conserved protein, DUF2256 family [Function unknown];
17-67 2.53e-22

Uncharacterized conserved protein, DUF2256 family [Function unknown];


Pssm-ID: 443479  Cd Length: 52  Bit Score: 80.43  E-value: 2.53e-22
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 2712798462 17 SMHRKPPLPSKLCQTCQRPFTWRKKWQDCWDDVRHCSQRCRRNARQLAREA 67
Cdd:COG4338    2 PRRKKSDLPSKICAVCGRPFTWRKKWARDWDEVKYCSERCRRNKKKAGDSA 52
DUF2256 pfam10013
Uncharacterized protein conserved in bacteria (DUF2256); Members of this family of ...
 20-59 4.40e-19

Uncharacterized protein conserved in bacteria (DUF2256); Members of this family of hypothetical bacterial proteins have no known function.


Pssm-ID: 462942  Cd Length: 40  Bit Score: 71.87  E-value: 4.40e-19
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 2712798462 20 RKPPLPSKLCQTCQRPFTWRKKWQDCWDDVRHCSQRCRRN 59
Cdd:pfam10013  1 KKSDLPSKICAVCGRPFTWRKKWARCWDEVKYCSDRCRRA 40
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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