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Conserved domains on  [gi|2713510040|ref|WP_340448259|]
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flagellar hook-associated protein FlgK [Priestia aryabhattai]

Protein Classification

flagellar hook-associated protein FlgK( domain architecture ID 11482878)

flagellar hook-associated protein FlgK forms the junction between the hook and the filament in the flagellum together with FlgL and provides a structural base where flagellin, a filament-forming protein, is inserted for the initiation of filament elongation

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
flgK PRK07739
flagellar hook-associated protein FlgK; Validated
 1-507 0e+00

flagellar hook-associated protein FlgK; Validated


:

Pssm-ID: 236084 [Multi-domain]  Cd Length: 507  Bit Score: 637.44  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040   1 MSSTFHGLQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLETFPAYPAPGMNQTGTAGQIGMGVEASTVERIRDTF 80
Cdd:PRK07739    1 MMSTFMGLETARRGLFAQQAALYVTGHNIANANTPGYTRQRVNLAATPPYPTPGMNRPKIPGQMGTGVEAGSVERIRDQF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040  81 LDTQYRDETIKVGYWDARAGALEKMEEIMNEPTEDGLSAVFNQFFESIQDVASHPSEAGARSVMIERAEAVGDTFSYLST 160
Cdd:PRK07739   81 LDIQYRRENNKLGYWETKADALSQMEDIMNEPSDTGLNKVLDQFWNSLQELSKNPENLGARSVVRQRAQALAETFNYLSQ 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 161 SLKTVQGDLQNERDVAVTQVNSLLEQISNVNQQIQSVEPNGYLPNDLYDERDRLLDEISKFMPVSLEYTKSSGNASATSE 240
Cdd:PRK07739  161 SLTDIQNDLKSEIDVTVKEINSLASQISDLNKQIAKVEPNGYLPNDLYDQRDLLLDELSKIVNITVEYNKSGGNALEDAE 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 241 GVVTVQLQTSQGAITLLDGKTHQVNAISL-KTNQDSYVTEIHIGDEIRNLE------SFPQGKLKGLIEASGYIDNSGNK 313
Cdd:PRK07739  241 GTFRIDILGGNGKGTLVDGKDSTVNELSVnKDDVTGLVTDLSLGGTTVSWDdtgqpvNPSSGKLKGLLEMYGYMSGNGEE 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 314 TGVYASMIDDLDEMAYEFVNWFNDKHQQGVTLDGDPGMSFFNEI-SQKEGAATGIVIADKIKQNTNNIAAASSassgddg 392
Cdd:PRK07739  321 KGLYPEMLNDLDKLAYTFATAFNEVHKQGYGLNGSTGIDFFDGTgDSTKGAAKTIKVSDDILADLNNIAAASD------- 393

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 393 TGRKGDGKNAQLLSQFRQKVLINSGNQAvSLDGFYQSVIGQMSVDAQQANRLKSNSETLQGAVEQRRQSTSAVSLDEEMT 472
Cdd:PRK07739  394 DGELGDGSNALNLANLKDFKLNSGLDTT-TFDDFYQSLIGNLGVDAQEANRMAENQEVLVDQVDNRRQSVSGVSLDEEMT 472

                         490       500       510
                  ....*....|....*....|....*....|....*
gi 2713510040 473 NMIQFQHAYNASARMVTMIDEMLDKIVNGLGTGGR 507
Cdd:PRK07739  473 NMIKFQHAYNAAARMITAIDEMLDKIINGMGIVGR 507
 
Name Accession Description Interval E-value
flgK PRK07739
flagellar hook-associated protein FlgK; Validated
 1-507 0e+00

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 236084 [Multi-domain]  Cd Length: 507  Bit Score: 637.44  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040   1 MSSTFHGLQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLETFPAYPAPGMNQTGTAGQIGMGVEASTVERIRDTF 80
Cdd:PRK07739    1 MMSTFMGLETARRGLFAQQAALYVTGHNIANANTPGYTRQRVNLAATPPYPTPGMNRPKIPGQMGTGVEAGSVERIRDQF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040  81 LDTQYRDETIKVGYWDARAGALEKMEEIMNEPTEDGLSAVFNQFFESIQDVASHPSEAGARSVMIERAEAVGDTFSYLST 160
Cdd:PRK07739   81 LDIQYRRENNKLGYWETKADALSQMEDIMNEPSDTGLNKVLDQFWNSLQELSKNPENLGARSVVRQRAQALAETFNYLSQ 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 161 SLKTVQGDLQNERDVAVTQVNSLLEQISNVNQQIQSVEPNGYLPNDLYDERDRLLDEISKFMPVSLEYTKSSGNASATSE 240
Cdd:PRK07739  161 SLTDIQNDLKSEIDVTVKEINSLASQISDLNKQIAKVEPNGYLPNDLYDQRDLLLDELSKIVNITVEYNKSGGNALEDAE 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 241 GVVTVQLQTSQGAITLLDGKTHQVNAISL-KTNQDSYVTEIHIGDEIRNLE------SFPQGKLKGLIEASGYIDNSGNK 313
Cdd:PRK07739  241 GTFRIDILGGNGKGTLVDGKDSTVNELSVnKDDVTGLVTDLSLGGTTVSWDdtgqpvNPSSGKLKGLLEMYGYMSGNGEE 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 314 TGVYASMIDDLDEMAYEFVNWFNDKHQQGVTLDGDPGMSFFNEI-SQKEGAATGIVIADKIKQNTNNIAAASSassgddg 392
Cdd:PRK07739  321 KGLYPEMLNDLDKLAYTFATAFNEVHKQGYGLNGSTGIDFFDGTgDSTKGAAKTIKVSDDILADLNNIAAASD------- 393

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 393 TGRKGDGKNAQLLSQFRQKVLINSGNQAvSLDGFYQSVIGQMSVDAQQANRLKSNSETLQGAVEQRRQSTSAVSLDEEMT 472
Cdd:PRK07739  394 DGELGDGSNALNLANLKDFKLNSGLDTT-TFDDFYQSLIGNLGVDAQEANRMAENQEVLVDQVDNRRQSVSGVSLDEEMT 472

                         490       500       510
                  ....*....|....*....|....*....|....*
gi 2713510040 473 NMIQFQHAYNASARMVTMIDEMLDKIVNGLGTGGR 507
Cdd:PRK07739  473 NMIKFQHAYNAAARMITAIDEMLDKIINGMGIVGR 507
FlgK COG1256
Flagellar hook-associated protein FlgK [Cell motility];
3-503 1.91e-152

Flagellar hook-associated protein FlgK [Cell motility];


Pssm-ID: 440868 [Multi-domain]  Cd Length: 479  Bit Score: 443.55  E-value: 1.91e-152
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040   3 STFHGLQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLETFPAypapgmnQTGTAGQIGMGVEASTVERIRDTFLD 82
Cdd:COG1256     1 SLFSALNIALSGLNAAQRALDVTSHNIANANTPGYSRQRVVLSAAGP-------TATGAGQVGTGVRVTGIRRIRDEFLD 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040  83 TQYRDETIKVGYWDARAGALEKMEEIMNEPTEDGLSAVFNQFFESIQDVASHPSEAGARSVMIERAEAVGDTFSYLSTSL 162
Cdd:COG1256    74 AQLRSANSDLGYAEARADALSQLEALLGEPSDTGLSTALDDFFNALQELASNPESSAARQAVLEAAQALADRFNSLSSQL 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 163 KTVQGDLQNERDVAVTQVNSLLEQISNVNQQIQSVEPNGYLPNDLYDERDRLLDEISKFMPVsleytkssgNASATSEGV 242
Cdd:COG1256   154 QDLRADADSQIASTVDEINSLLSQIADLNKQIVKAEAGGQDANDLLDQRDQLLDELSELVGV---------TVVEQDDGT 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 243 VTVQLQTSQgaiTLLDGKTHQVNAISLKTNQDSYVTEIHI---GDEIRNLESFPQGKLKGLIEAsgyidnsgnKTGVYAS 319
Cdd:COG1256   225 VNVSTGNGQ---TLVDGDTASELSFTPSAGDPGGLSTVTLddsGVPSDATSSITGGSLGGLLEL---------RDETLPE 292

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 320 MIDDLDEMAYEFVNWFNDKHQQGVTLDGDPGMSFFNEISQKEGA---------ATGIVIADKIKQNTNNIaaassaSSGD 390
Cdd:COG1256   293 YQAQLDELARGLADAFNAVHAQGYDLNGNPGGDLFDIDPSITGGtltpfdtvgAGNISVNPAVIGDPSLL------AAAN 366

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 391 DGTGRKGDGKNAQLLSQFRQKVLINSGNQAVSLDGFYQSVIGQMSVDAQQANRLKSNSETLQGAVEQRRQSTSAVSLDEE 470
Cdd:COG1256   367 SDGGGAGDNTNALALAALQDAKLVFDSGGSGTLSDYYASLVSDLGVDAQQAKTEAEAQEALLDQLENQRQSVSGVNLDEE 446

                         490       500       510
                  ....*....|....*....|....*....|...
gi 2713510040 471 MTNMIQFQHAYNASARMVTMIDEMLDKIVNGLG 503
Cdd:COG1256   447 MANLIKFQQAYQANARVITTADEMLDTLLNIVG 479
flgK_ends TIGR02492
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of ...
 7-349 7.38e-77

flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of bacterial flagella has conserved N- and C-terminal domains. The central region is highly variable in length and sequence, and often contains substantial runs of low-complexity sequence. This model is built from an alignment of FlgK sequences with the central region excised. Note that several other proteins of the flagellar apparatus also are homologous in the N- and C-terminal regions to FlgK, but are excluded from this model. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274162 [Multi-domain]  Cd Length: 323  Bit Score: 244.18  E-value: 7.38e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040   7 GLQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLETFPAYpapgmnqTGTAGQIGMGVEASTVERIRDTFLDTQYR 86
Cdd:TIGR02492   2 LLNIAKSGLSASQIALSVTSNNIANANTPGYSRQRAVLTAVPAG-------GQGGKQIGTGVKVTSIRRIQDQFLDNQYR 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040  87 DETIKVGYWDARAGALEKMEEIMNEPTEDGLSAVFNQFFESIQDVASHPSEAGARSVMIERAEAVGDTFSYLSTSLKTVQ 166
Cdd:TIGR02492  75 RANSSAGYADSRASGLSKIEQIFNDLDGSGLGTYLNNFFNALQELAKNPDSEALRQAVLESAQALANSFNQTSNELQDLR 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 167 GDLQNERDVAVTQVNSLLEQISNVNQQIQSVEPNGYLPNDLYDERDRLLDEISKFMPVSLEYTKSSGNASATSEGVVTVQ 246
Cdd:TIGR02492 155 KGINAEIKSAVTEINSLLKQIASLNKEIKQVEASGQDANDLLDQRDLLLKELSQLIGISVSENENGTVNVYTGSGQVLVD 234

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 247 LQTSQGAITLLDGKTHQVNAIslktnqDSYVTEIHIGDEIRNLES-FPQGKLKGLIEAsgyidnsgnKTGVYASMIDDLD 325
Cdd:TIGR02492 235 GATVTGSSTSPLTADTTGGKV------GGDGVYLPSGSSKVTISSdLQGGKLGGLLDL---------RDGVLPDLQSQLD 299

                         330       340
                  ....*....|....*....|....
gi 2713510040 326 EMAYEFVNWFNDKHQQGVTLDGDP 349
Cdd:TIGR02492 300 QLAKTLADEFNEVHQSGADLTGSA 323
Flg_bbr_C pfam06429
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of ...
 424-500 1.15e-11

Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which pfam00460 is often present at the extreme N terminus.


Pssm-ID: 428939 [Multi-domain]  Cd Length: 74  Bit Score: 60.36  E-value: 1.15e-11
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2713510040 424 DGFYQSVIGQMSVDAQQANRLKsnsetlQGAVEqrrqsTSAVSLDEEMTNMIQFQHAYNASARMVTMIDEMLDKIVN 500
Cdd:pfam06429   8 DNLFRETDGAPILGAGADGRVQ------QGYLE-----GSNVNPVEEMVNMIEAQRAYEANSKVIQTADEMLQTANQ 73
 
Name Accession Description Interval E-value
flgK PRK07739
flagellar hook-associated protein FlgK; Validated
 1-507 0e+00

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 236084 [Multi-domain]  Cd Length: 507  Bit Score: 637.44  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040   1 MSSTFHGLQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLETFPAYPAPGMNQTGTAGQIGMGVEASTVERIRDTF 80
Cdd:PRK07739    1 MMSTFMGLETARRGLFAQQAALYVTGHNIANANTPGYTRQRVNLAATPPYPTPGMNRPKIPGQMGTGVEAGSVERIRDQF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040  81 LDTQYRDETIKVGYWDARAGALEKMEEIMNEPTEDGLSAVFNQFFESIQDVASHPSEAGARSVMIERAEAVGDTFSYLST 160
Cdd:PRK07739   81 LDIQYRRENNKLGYWETKADALSQMEDIMNEPSDTGLNKVLDQFWNSLQELSKNPENLGARSVVRQRAQALAETFNYLSQ 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 161 SLKTVQGDLQNERDVAVTQVNSLLEQISNVNQQIQSVEPNGYLPNDLYDERDRLLDEISKFMPVSLEYTKSSGNASATSE 240
Cdd:PRK07739  161 SLTDIQNDLKSEIDVTVKEINSLASQISDLNKQIAKVEPNGYLPNDLYDQRDLLLDELSKIVNITVEYNKSGGNALEDAE 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 241 GVVTVQLQTSQGAITLLDGKTHQVNAISL-KTNQDSYVTEIHIGDEIRNLE------SFPQGKLKGLIEASGYIDNSGNK 313
Cdd:PRK07739  241 GTFRIDILGGNGKGTLVDGKDSTVNELSVnKDDVTGLVTDLSLGGTTVSWDdtgqpvNPSSGKLKGLLEMYGYMSGNGEE 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 314 TGVYASMIDDLDEMAYEFVNWFNDKHQQGVTLDGDPGMSFFNEI-SQKEGAATGIVIADKIKQNTNNIAAASSassgddg 392
Cdd:PRK07739  321 KGLYPEMLNDLDKLAYTFATAFNEVHKQGYGLNGSTGIDFFDGTgDSTKGAAKTIKVSDDILADLNNIAAASD------- 393

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 393 TGRKGDGKNAQLLSQFRQKVLINSGNQAvSLDGFYQSVIGQMSVDAQQANRLKSNSETLQGAVEQRRQSTSAVSLDEEMT 472
Cdd:PRK07739  394 DGELGDGSNALNLANLKDFKLNSGLDTT-TFDDFYQSLIGNLGVDAQEANRMAENQEVLVDQVDNRRQSVSGVSLDEEMT 472

                         490       500       510
                  ....*....|....*....|....*....|....*
gi 2713510040 473 NMIQFQHAYNASARMVTMIDEMLDKIVNGLGTGGR 507
Cdd:PRK07739  473 NMIKFQHAYNAAARMITAIDEMLDKIINGMGIVGR 507
FlgK COG1256
Flagellar hook-associated protein FlgK [Cell motility];
3-503 1.91e-152

Flagellar hook-associated protein FlgK [Cell motility];


Pssm-ID: 440868 [Multi-domain]  Cd Length: 479  Bit Score: 443.55  E-value: 1.91e-152
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040   3 STFHGLQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLETFPAypapgmnQTGTAGQIGMGVEASTVERIRDTFLD 82
Cdd:COG1256     1 SLFSALNIALSGLNAAQRALDVTSHNIANANTPGYSRQRVVLSAAGP-------TATGAGQVGTGVRVTGIRRIRDEFLD 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040  83 TQYRDETIKVGYWDARAGALEKMEEIMNEPTEDGLSAVFNQFFESIQDVASHPSEAGARSVMIERAEAVGDTFSYLSTSL 162
Cdd:COG1256    74 AQLRSANSDLGYAEARADALSQLEALLGEPSDTGLSTALDDFFNALQELASNPESSAARQAVLEAAQALADRFNSLSSQL 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 163 KTVQGDLQNERDVAVTQVNSLLEQISNVNQQIQSVEPNGYLPNDLYDERDRLLDEISKFMPVsleytkssgNASATSEGV 242
Cdd:COG1256   154 QDLRADADSQIASTVDEINSLLSQIADLNKQIVKAEAGGQDANDLLDQRDQLLDELSELVGV---------TVVEQDDGT 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 243 VTVQLQTSQgaiTLLDGKTHQVNAISLKTNQDSYVTEIHI---GDEIRNLESFPQGKLKGLIEAsgyidnsgnKTGVYAS 319
Cdd:COG1256   225 VNVSTGNGQ---TLVDGDTASELSFTPSAGDPGGLSTVTLddsGVPSDATSSITGGSLGGLLEL---------RDETLPE 292

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 320 MIDDLDEMAYEFVNWFNDKHQQGVTLDGDPGMSFFNEISQKEGA---------ATGIVIADKIKQNTNNIaaassaSSGD 390
Cdd:COG1256   293 YQAQLDELARGLADAFNAVHAQGYDLNGNPGGDLFDIDPSITGGtltpfdtvgAGNISVNPAVIGDPSLL------AAAN 366

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 391 DGTGRKGDGKNAQLLSQFRQKVLINSGNQAVSLDGFYQSVIGQMSVDAQQANRLKSNSETLQGAVEQRRQSTSAVSLDEE 470
Cdd:COG1256   367 SDGGGAGDNTNALALAALQDAKLVFDSGGSGTLSDYYASLVSDLGVDAQQAKTEAEAQEALLDQLENQRQSVSGVNLDEE 446

                         490       500       510
                  ....*....|....*....|....*....|...
gi 2713510040 471 MTNMIQFQHAYNASARMVTMIDEMLDKIVNGLG 503
Cdd:COG1256   447 MANLIKFQQAYQANARVITTADEMLDTLLNIVG 479
flgK PRK06665
flagellar hook-associated protein FlgK; Validated
 1-503 1.44e-86

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 180650 [Multi-domain]  Cd Length: 627  Bit Score: 278.86  E-value: 1.44e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040   1 MSSTFHGLQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLETFPAYPAPGMNQTGTAGQIGMGVEASTVERIRDTF 80
Cdd:PRK06665    1 MDSTFSGIEIGKRSLFAHKQALQTTGHNISNASTKGYSRQRVTMKTFDPLYAPSLNRAEKPGQIGQGVEIQSIERIRDEL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040  81 LDTQYRDETIKVGYWDARAGALEKMEEIMNEPTEDGLSAVFNQFFESIQDVASHPSEAGARSVMIERAEAVGDTFSYLST 160
Cdd:PRK06665   81 LDSRIIEESGRLGYWKTKDKYLSQLEQVYNEPEDQSLRTRLDDFWDSWQDLSNYPEGLAERQVVLERAQSLGERIHDRYR 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 161 SLKTVQGDLQNERDVAVTQVNSLLEQISNVNQQIQSVEPNGYLPNDLYDERDRLLDEISKFMPVSLE------------- 227
Cdd:PRK06665  161 SLERIRDMANDEIEITVEEINNILRNIADLNEQIVKSQAMGDNPNDLLDRRDLLVDKLSSLIDVSIErsdpdefmihigg 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 228 --------YTKSSGNASATSEGV---------VTVQLQTS--QGAITLLDGKThqVNAI----SLKTNQDSYVTEIHIG- 283
Cdd:PRK06665  241 rhlvqgniANELDLEANPPNEGYwdilwsangDPALLRTGklGALIELRDTDI--RDEIneldTLAINIVDLVNEIHRSg 318

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 284 ---DEIRNLESFPQGKLkgLIEASGYIDNSGN---------------------KTGVYASMI------DDLDEMAY---- 329
Cdd:PRK06665  319 fglNGKTGRDFFTQEYK--LTNTRGNYDSNGDgqfdsthifrvngtnsidpdeKIGISGTLRfqasnkNGTVEIPYnatd 396

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 330 --------------EFVNWFNDKHQ---QGVTLDGDPGMSFF--------------------------------NEISQK 360
Cdd:PRK06665  397 tvndvikrinnsnaQVTAYLNHNNKlvlKATKADDDENPDFVirhiedsgdflvgytgilnasgpegaydyqriDTINKL 476

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 361 EGAATG------------IVIADKIKQNTNNIAAASSASSGDDGTgrkGDGKNAQLLSQFRQK-VLINSgnqAVSLDGFY 427
Cdd:PRK06665  477 QGNGADytvsplkhpaswIKVNDIIRNDPSNIAAGIGDPTNPNGI---GDGRAALAIASLRNSpVMVGK---SKTFDDFF 550

                         570       580       590       600       610       620       630
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2713510040 428 QSVIGQMSVDAQQANRLKSNSETLQGAVEQRRQSTSAVSLDEEMTNMIQFQHAYNASARMVTMIDEMLDKIVNGLG 503
Cdd:PRK06665  551 ANTISNIGIKGETAEIEKESQNQIMKELEDLRQSVSGVNLDEELANMIEFQHGYNASARFISVSNELLDTIINRMG 626
flgK_ends TIGR02492
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of ...
 7-349 7.38e-77

flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of bacterial flagella has conserved N- and C-terminal domains. The central region is highly variable in length and sequence, and often contains substantial runs of low-complexity sequence. This model is built from an alignment of FlgK sequences with the central region excised. Note that several other proteins of the flagellar apparatus also are homologous in the N- and C-terminal regions to FlgK, but are excluded from this model. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274162 [Multi-domain]  Cd Length: 323  Bit Score: 244.18  E-value: 7.38e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040   7 GLQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLETFPAYpapgmnqTGTAGQIGMGVEASTVERIRDTFLDTQYR 86
Cdd:TIGR02492   2 LLNIAKSGLSASQIALSVTSNNIANANTPGYSRQRAVLTAVPAG-------GQGGKQIGTGVKVTSIRRIQDQFLDNQYR 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040  87 DETIKVGYWDARAGALEKMEEIMNEPTEDGLSAVFNQFFESIQDVASHPSEAGARSVMIERAEAVGDTFSYLSTSLKTVQ 166
Cdd:TIGR02492  75 RANSSAGYADSRASGLSKIEQIFNDLDGSGLGTYLNNFFNALQELAKNPDSEALRQAVLESAQALANSFNQTSNELQDLR 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 167 GDLQNERDVAVTQVNSLLEQISNVNQQIQSVEPNGYLPNDLYDERDRLLDEISKFMPVSLEYTKSSGNASATSEGVVTVQ 246
Cdd:TIGR02492 155 KGINAEIKSAVTEINSLLKQIASLNKEIKQVEASGQDANDLLDQRDLLLKELSQLIGISVSENENGTVNVYTGSGQVLVD 234

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 247 LQTSQGAITLLDGKTHQVNAIslktnqDSYVTEIHIGDEIRNLES-FPQGKLKGLIEAsgyidnsgnKTGVYASMIDDLD 325
Cdd:TIGR02492 235 GATVTGSSTSPLTADTTGGKV------GGDGVYLPSGSSKVTISSdLQGGKLGGLLDL---------RDGVLPDLQSQLD 299

                         330       340
                  ....*....|....*....|....
gi 2713510040 326 EMAYEFVNWFNDKHQQGVTLDGDP 349
Cdd:TIGR02492 300 QLAKTLADEFNEVHQSGADLTGSA 323
flgK PRK07191
flagellar hook-associated protein FlgK; Validated
 8-502 6.54e-43

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 180871 [Multi-domain]  Cd Length: 456  Bit Score: 158.45  E-value: 6.54e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040   8 LQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLETFPAYPAPGMNQTGtagqigmGVEASTVERIRDTFLDTQYRD 87
Cdd:PRK07191    4 IRTAFSGMQAAQAHLNATSMNIANMHTPGYSRQGVEQSAIGADGQGGVNAGN-------GVNVDGIRRLSQQYVVMQEWQ 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040  88 ETIKVGYWDARAGALEKMEEIM-NEPTEDGLSavFNQFFESIQDVASHPSEAGARSVMIERAEAVGDTFSYLSTSLKTVQ 166
Cdd:PRK07191   77 ANSQQGYYDAGEQYFNALELVVgNKSTSLATG--LNNFFSALSAATQLPDSPPMRQQVIESANAMALRFNNVNNFIVQQK 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 167 GDLQNERDVAVTQVNSLLEQISNVNQQIQSVEPNGYLPNDLYDERDRLLDEISKFMPVSLeytkssgnaSATSEGVVTVQ 246
Cdd:PRK07191  155 KSIGQQRDATVKQINSLTRSIADYNQKILKNRSDGNNISDLLDQRDLQIKKLSGLIEVRV---------VQQEDGTYRVS 225

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 247 LQTSQGAITlldgkTHQVNAISLKTNQ-DSYVTEIHIGDEIRNLESFPQGKLKGLIEAsgyidnsgnKTGVYASMIDDLD 325
Cdd:PRK07191  226 VKNGQPLVN-----GAVAAELAVDTSSvGTQKLTLHFSGATQGMNMSCGGQLGGLNDY---------ELTTLKPLQDSTQ 291

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 326 EMAYEFVNWFNDKHQQGVTLDGDPGMSFFneiSQKEGAATGIVIADKIKqntnniaaasSASSGDDGTGRK-GDGKNAQL 404
Cdd:PRK07191  292 EMAKTVADKFNDQLTKGFDMNGAPGKPLF---TFNPSDPNGMLQLSAIK----------PEELALSGDPKPpGDNSNLFE 358

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 405 LSQFRQKVLINSGNQAVSLDGFYQSVIGQMSVDAQQANRLKSNSETLQGAVEQRRQSTSAVSLDEEMTNMIQFQHAYNAS 484
Cdd:PRK07191  359 LLEIRSQKTDLPGMGNVSLGDAATALVGYIAITSNQNHSELENAENVRNQAERYWESFSGVNNDEEAMNLMEYQRAYQSN 438

                         490
                  ....*....|....*...
gi 2713510040 485 ARMVTMIDEMLDKIVNGL 502
Cdd:PRK07191  439 MKVIATGDKLFSDLLALV 456
flgK PRK08471
flagellar hook-associated protein FlgK; Validated
 1-496 1.26e-40

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 236270 [Multi-domain]  Cd Length: 613  Bit Score: 154.44  E-value: 1.26e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040   1 MSSTFHGLQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSletfpAYPAPGMNQTGtaGQIGMGVEASTVERIRDTF 80
Cdd:PRK08471    1 MMGIFSSLNTGYTGLQAAQVMVDTTGNNISNASSEFYTRQRVV-----QSAQAALNTGG--GNVGTGTDIETIVRIHDEF 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040  81 LDTQYRDETIKVGYWDARAGALEKMEEIMNEPTEDGLSAVFNQFFESIQDVASHPSEAGARSVMIERAEAVGDTFSYLST 160
Cdd:PRK08471   74 VYSRYKKASTELEYTDYEFSTLQEASQYFPDLDDTGILKDLQDYFNAWNDFASNPKDSAQKQALAQKTETLTNNIKDTRE 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 161 SLKTVQGDLQNERDVAVTQVNSLLEQISNVNQQIQSVEPNGYLP--NDLYDERDRLLDEISKFMPVSLeyTKSSGNASAT 238
Cdd:PRK08471  154 RLDTLQKKVNEELKVTVDEINSLGKQIAEINKQIKEVEAGKTLKhaNELRDKRDELELTLSKLVGANV--FKSSIKSDSR 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 239 SEGVVTVQLQT---SQGAITLLDGKTHQVNAISLKTNQDSYVT---EIHIGDEIRNLESFPQGKLKGLIEASGYI---DN 309
Cdd:PRK08471  232 LDTTSADFGESynlNIGGFNIVDGSNFHPLVLDEDENKGGFNQiyyESDDFKRIDITDKISGGKVGALLDLRGRNydgGS 311

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 310 SGNKTGVYASMIDDLDEMAYEFVNWFNDKHQQGVTL----------DGDPGMSFFNEIsqKEGA-------ATGIVIADK 372
Cdd:PRK08471  312 GGTLDGKIQDYIDNLDTFAKTLIESTNNIYAQSATEsiesdplslkSDEALVDTNYNI--QNGSfdlvvydTDGKEVARK 389

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 373 ----------------IKQNT---------NNIAAASSASSGDDGTGRKG------------------------------ 397
Cdd:PRK08471  390 tinidvittmndivqqINANTddnndnnanNDVDDYFTASFNNDTKTGDGlfqiqpknasqgytvsiedkgtnfpgalgl 469

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 398 ----DGKNAQ---LLSQFRQK-VLINSGNQAVS------------------------------LDGFYQSVIGQMSVDAQ 439
Cdd:PRK08471  470 nrffDGDDASnisLNSSYKKDpTTIRAWLAPVDgnndvankmqqlqydkvnfynnkgtiknmtIEEYYRFLTTKIASDTE 549

                         570       580       590       600       610
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2713510040 440 QANRLKSNSETLQGAVEQRRQSTSAVSLDEEMTNMIQFQHAYNASARMVTMIDEMLD 496
Cdd:PRK08471  550 KNNRINDTNKALLNSVKKEYQSISGVSTDEELVNLIKFQSSYGAAAKIITTIDQMLD 606
flgK PRK08147
flagellar hook-associated protein FlgK; Validated
 11-500 5.83e-40

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 236165 [Multi-domain]  Cd Length: 547  Bit Score: 151.75  E-value: 5.83e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040  11 AKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLETfpaypaPGMNQTGtAGQIGMGVEASTVERIRDTFLDTQYRDETI 90
Cdd:PRK08147    8 AMSGLNAAQAALNTVSNNISNYNVAGYTRQTTILAQ------AGSTLTA-GGWIGNGVYVSGVQREYDAFITNQLRAAQT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040  91 KVGYWDARAGALEKMEEIMNEPTeDGLSAVFNQFFESIQDVASHPSEAGARSVMIERAEAvgdtfsyLSTSLKTVQGDLQ 170
Cdd:PRK08147   81 QSSGLTTRYEQMSKIDNLLSDST-NSLSTTMQDFFTSLQTLVSNAEDPAARQALIGKAEG-------LVNQFKTTDQYLR 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 171 NERD-------VAVTQVNSLLEQISNVNQQIQSVE--PNGYLPNDLYDERDRLLDEISKFmpVSLEYTKSSGnasatseG 241
Cdd:PRK08147  153 DQDKgvntaigSSVDQINNYAKQIASLNDQITRLTgvGAGASPNDLLDQRDQLVSELNQI--VGVEVSVQDG-------G 223

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 242 VVTVQLqtsQGAITLLDGKT-HQVNAISlkTNQDS------YVTEIHIGDEIrNLESFPQGKLKGLIEA-SGYIDNSGNK 313
Cdd:PRK08147  224 TYNITM---ANGYSLVQGSTaYQLAAVP--SSADPtrttvaYVDGTAGNIEI-PEKLLTTGSLGGLLTFrSQDLDQTRNQ 297

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 314 TGvyasmiddldEMAYEFVNWFNDKHQQGVTLDGDPGMSFFN-----EISQKEGAATGIV-------------------- 368
Cdd:PRK08147  298 LG----------QLALAFADAFNTQHKAGFDANGDAGEDFFSigkpaVLSNSKNTGTASLtaeytdasavkatdykisfd 367

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 369 --------IADKIKQNTN-----------------------------------------NIAAASSASSGDDGTGRKGDG 399
Cdd:PRK08147  368 gtnwqvtrLSDNTTFTVTpdangktlefdglkvtvtgtpaandsftlkpvsdaivnmdvLITDESKIAMASEADGGDSDN 447

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 400 KNAQLLSQFRQKVLINsGNQavSLDGFYQSVIGQMSVDAQQanrLKSNSETLQGAVEQ---RRQSTSAVSLDEEMTNMIQ 476
Cdd:PRK08147  448 RNGQALLDLQNKKLVG-GKK--SFNDAYASLVSDVGNQTAT---LKTSSTTQANVVTQltnQQQSVSGVNLDEEYGNLQR 521

                         570       580
                  ....*....|....*....|....
gi 2713510040 477 FQHAYNASARMVTMIDEMLDKIVN 500
Cdd:PRK08147  522 FQQYYLANAQVLQTASTLFDALLN 545
flgK PRK06945
flagellar hook-associated protein FlgK; Validated
 8-355 3.34e-36

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 235895 [Multi-domain]  Cd Length: 651  Bit Score: 142.46  E-value: 3.34e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040   8 LQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSletfpaYPAPGMNQTGtAGQIGMGVEASTVERIRDTFLDTQYRD 87
Cdd:PRK06945    5 LNIGLSGLNAAQWGLTTTGHNISNAATPGYSRQRVV------QAEAGGQYTG-SGYLGQGVNVVTVKRQYSQYLSAQLNN 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040  88 ETIKVGYWDARAGALEKMEEIMNEPTEdGLSAVFNQFFESIQDVASHPSEAGARSVMIERAEAVGDTFSYLSTSLKTVQG 167
Cdd:PRK06945   78 AQAASSSLSTYYSQISQLNNYLADPTA-GLSPAITSFFTGLQNVANNPSDPSARQTMLSNAQTLASQFNAAGQQLDQLRQ 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 168 DLQNERDVAVTQVNSLLEQISNVNQQIQSVE-PNGYLPNDLYDERDRLLDEISKFMPVSLeytkssgnaSATSEGVVTVQ 246
Cdd:PRK06945  157 SVNTQLTSSVTQINSYTKQIAQLNDQIAKAEsSQGQPPNDLLDQRDQLVSELSKLVGVTV---------VQQDDGGYNVF 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 247 LQTSQGAItlLDGKTHQVNAISLKTNQDSYVTEIHI---GDEIRNLESFPQGKLKGLIE-ASGYIDNSGNKTGvyasmid 322
Cdd:PRK06945  228 VGNGQPLV--VGNQSYQLTTVPSPSDPSRLTVAGYKppgTTQELPDSSLTGGTLGGLLAfRSQTLDPAQNQLG------- 298

                         330       340       350
                  ....*....|....*....|....*....|...
gi 2713510040 323 dldEMAYEFVNWFNDKHQQGVTLDGDPGMSFFN 355
Cdd:PRK06945  299 ---RLAASLAAQFNAQNALGIDLNGNLGGDLFS 328
flgK PRK06799
flagellar hook-associated protein FlgK; Validated
 14-498 8.65e-36

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 180699 [Multi-domain]  Cd Length: 431  Bit Score: 138.09  E-value: 8.65e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040  14 GMDAQQAALYTIGHNVSNANTPGYTRQRVSletfpaYPAPGMNQTGTAGQ-IGMGVEASTVERIRDTFLDTQYRDETIKV 92
Cdd:PRK06799   12 GMLAAQMGLQTTQQNLSNIHTPGYVRQMVN------YGSVGASGGLLPEQqIGYGVQTLGVDRITDEVKTKQYNDQLSQL 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040  93 GYWDARAGALEKMEEIMNEPTEDGLSAVFNQFFESIQDVASHPSEAGARSVMIERAEAVGDTFSYLSTSLKTVQGDLQNE 172
Cdd:PRK06799   86 SYYNYMNSALSRVESMVGTTGKNSLSSLMDGFFNAFREVAKNPEQANYYDTLISETGKFTSQLNRLAKGLDELEAQTTED 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 173 RDVAVTQVNSLLEQISNVNQQIQSVEPNgyLPNDLYDERDRLLDEISKFMPVSLEYTKSSGN-ASATSEGVVTVQLQTSQ 251
Cdd:PRK06799  166 IEAHVNEFNRLAKSLAEANKKIGQAGTQ--VPNQLLDERDRILTEMSKYANIEVSYESMNPNiASVRMNGVLTVNGQDTY 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 252 gAITLLDGKTHQVNAISlktNQDSYVTEIHIGDEIRNlesfpQGKLKglieasGYIDNSGNKTGVYASMIDDLdeMAYEF 331
Cdd:PRK06799  244 -PLQLNKTKEPMEFEIY---GSEIPLPSGAIISAIDT-----KAKIK------SYKKNLEELMSSLKKAVNTV--MGKSF 306

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 332 vnwFNDKHQQGVTLDGDpgmsFFNEISQKEGAAtgiVIADKIKQNTnniaaassassgddgtgrkgDGKNAQLLSqFRQk 411
Cdd:PRK06799  307 ---FVGDSAKKWKLNPE----FAKDVSKMKISA---ETANKLAAIT--------------------DDKYKEGLS-YKQ- 354

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 412 vlinsgnqavSLDGFyqsvIGQMSVDAQQANRLKSNSETLQGAVEQRRQSTSAVSLDEEMTNMIQFQHAYNASARMVTMI 491
Cdd:PRK06799  355 ----------ALDQF----IVGVASDKSAVNAYQKIHTDLLEGIQQEKMSLEGVNMEEEMVNLMAFQKYFVANSKAITTM 420


                  ....*..
gi 2713510040 492 DEMLDKI 498
Cdd:PRK06799  421 NEVFDSL 427
flgK PRK07521
flagellar hook-associated protein FlgK; Validated
 17-496 4.26e-34

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 236038 [Multi-domain]  Cd Length: 483  Bit Score: 134.29  E-value: 4.26e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040  17 AQQAAlyTIGHNVSNANTPGYTRQRVSLETFPAypapgmnqtgtagqigmGVEASTVERIRDTFLDTQYRDETIKVGYWD 96
Cdd:PRK07521   18 SRQTS--VVSRNIANAGTPGYSRREASLVSGPA-----------------GGQVVGISRAQDPALLAQRLLATSAAAAQD 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040  97 ARAGALEKMEEIMNEPTEDG-LSAVFNQFFESIQDVASHPSEAGARSVMIERAEAVGDTFSYLSTSLKTVQGDLQNERDV 175
Cdd:PRK07521   79 TLADGLERLASTVGDNDYEGsPSARLSDFQAALQTAASSPDNTTLAQAAVDAAQDLANSLNDASDAVQSARADADAEIAD 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 176 AVTQVNSLLEQISNVNQQIQSVEPNGYLPNDLYDERDRLLDEISKFMPVSleyTKSSGNASatsegvvtVQLQTSQGAiT 255
Cdd:PRK07521  159 SVDTLNDLLAQFEDANNAVVSGTATGRDASDALDQRDKLLKQISQIVGVT---TVTRDNND--------MALYTDGGV-T 226

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 256 LLDGKTHQVNAislkTNQDSYVTEIHIGDEIRN-----LESFP----QGKLKGLIEAsgyidnsgnKTGVYASMIDDLDE 326
Cdd:PRK07521  227 LFETTPRTVTF----TPTATYTAGTTGNAVYIDgvpltGGSGVmplaGGSLAALLQL---------RDEIAPTYQAQLDE 293

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 327 MAYEFVNWFNDKHQQGVtlDGDPGMsFFNEISQKEGAATGIVIADKIKQNTNNI-------------AAASSASSGDDGT 393
Cdd:PRK07521  294 IARGLITRFAESDPTGA--AGDPGL-FTDSGAPADPAAGEAGLAGRISVNAAVDpsqggdpwllrdgGINGAAYLGANTT 370

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 394 GRKGDGKNAQLLSQ-FRQKVLINSGNQ---AVSLDGFYQSVIGQMSVDAQQANRLKSNSETLQGAVEQRRQSTSAVSLDE 469
Cdd:PRK07521  371 GAAGFSTRLNALVDaLSAPRTFDSAAGlsgSSSLMDLAASSLSWLEQQRSSASSEASYASALLSRADEALSNATGVDTDD 450

                         490       500
                  ....*....|....*....|....*..
gi 2713510040 470 EMTNMIQFQHAYNASARMVTMIDEMLD 496
Cdd:PRK07521  451 EMALLLDLEQSYAASAKVISTVDEMLD 477
flgK PRK05683
flagellar hook-associated protein FlgK; Validated
 14-379 3.66e-31

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 235558 [Multi-domain]  Cd Length: 676  Bit Score: 127.54  E-value: 3.66e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040  14 GMDAQQAALYTIGHNVSNANTPGYTRQRVSLETfpaypaPGMNQTGtAGQIGMGVEASTVERIRDTFLDTQYRDETIKVG 93
Cdd:PRK05683   10 GLGASQTALAVTGNNIANVDTAGYSRQQTVQTT------KASQQSG-AGYIGTGTTLADVRRIYNSFLDTQLRTATSLNS 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040  94 YWDARAGALEKMEEIMNEPTEdGLSAVFNQFFESIQDVASHPSEAGARSVMIERAEAVGDTFSYLSTSLKTvQGDLQNER 173
Cdd:PRK05683   83 DASAYLGQISQLDKLLSDSTT-GISPALQRFFTALQTAAANPTDTAARQLLLTQAQGLSKRFNSLSSQLNQ-QNSNINSQ 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 174 DVAVT-QVNSLLEQISNVNQQIQSVEPNGYLPNDLYDERDRLLDEISKFMPVSLeytkssgnasATSEGVVTVQLQTSQG 252
Cdd:PRK05683  161 LSAMTdQVNNLTTSIASYNKQIAQASASGATPNDLLDARDEAVRQLNELVGVTV----------VERDGNYDVYIGSGQP 230

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 253 AItlLDGKTHQVNAISLKTNQDSYVTEIHIGDEIRNLESFPQ-GKLKGLIE-ASGYIDNSGNKTGVYASMIDDLdemaye 330
Cdd:PRK05683  231 LV--VGNTANTLSVVPGPSDPSRYNVQLNRGSSTQDVTSVVSgGEIGGLLRyRSDVLDPAMNELGRLALVVADQ------ 302

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2713510040 331 fvnwFNDKHQQGVTLDGDPGMSFFNEI------SQKEGAATG---------IVIADKIKQNTNN 379
Cdd:PRK05683  303 ----INSQLGQGIDLNGNFGSSLFGDInsadaiSQRSLAKNGnsagsgnlnVTIKDTSKLTTSD 362
flgK PRK08871
flagellar hook-associated protein FlgK; Validated
 8-425 5.67e-21

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 181572 [Multi-domain]  Cd Length: 626  Bit Score: 96.45  E-value: 5.67e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040   8 LQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLETfpayPAPgmNQTGTAgQIGMGVEASTVERIRDTFLDTQYRD 87
Cdd:PRK08871    6 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGT----NDP--RQFGGS-TYGMGVHVENVRRSWDQFAVNELNL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040  88 ETIKVGYWDARAGALEKMEEIMNEPTEDGLSAVFNQFFESIQDVASHPSEAGARSVMIERAEAVGDTfsyLSTSLKTV-- 165
Cdd:PRK08871   79 STTNLANKTDTEANLDMLSSMLSSVASKKIPENLNEWFDAVKTLADSPNDLGARKVVLEKAKLISQT---LNDFHETVrq 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 166 QGDLQNER-DVAVTQVNSLLEQISNVNQQIQSVePNGYlpNDLYDERDRLLDEISKFMPVSLEYTKSS-------GNASA 237
Cdd:PRK08871  156 QKDVTNKKlDLGVERINQIALEIRDIHRLMMRT-PGPH--NDLMDQHEKLVKELSQYTKVTVTPRKNAegfnvhiGNGHT 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 238 TSEGVVTVQLQTSQGAITLLDGKTHQVNAISLKTnqdsyVTEIHIGdeirnlesfpqGKLKGLIEASgyidnsgNKTGVY 317
Cdd:PRK08871  233 LVSGTEASQLKMIDGYPDPHQRRLAMVEGKGLKA-----IKADDIG-----------GKLGALLDMR-------DEHIPY 289

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 318 AsmIDDLDEMAYEFVNWFNDKHQQGVTLDGDPGMSFFNEISQKEGAATGIVIADKIKQNTN-NIAAASSASSGDDGTGRK 396
Cdd:PRK08871  290 L--MDELGRLATGFSSEVNTLQSQGLDLRGNVGGNLFTDVNSEVIARSRVVTAPNSKADVAvFIDDISQLKGGEYALRYD 367

                         410       420
                  ....*....|....*....|....*....
gi 2713510040 397 GDGKNAQLLSQFRQKVLINSGNQAVSLDG 425
Cdd:PRK08871  368 GSQYTVTKPSGEQQSLDPDGNPSAFYLDG 396
flgK PRK12714
flagellar hook-associated protein FlgK; Provisional
 17-355 1.59e-20

flagellar hook-associated protein FlgK; Provisional


Pssm-ID: 183697 [Multi-domain]  Cd Length: 624  Bit Score: 95.02  E-value: 1.59e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040  17 AQQAALYTIGHNVSNANTPGYTRQRVSLETfpAYPapgmNQTGTAgQIGMGVEASTVERIRDTFLDTQYRDETIKVgywd 96
Cdd:PRK12714   13 AFQRALSTVSHNVANINTEGYSRQRVEFAT--RTP----TDMGYA-FVGNGAKITDVGRVADQLAISRLLDSGGEL---- 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040  97 ARAGALEKMEEIMNEPTED---GLSAVFNQFFESIQDVASHPSEAGARSVMIERAEAVGDTFSYLSTSLKTVQGDLQNER 173
Cdd:PRK12714   82 SRLQQLSSLSNRVDALYSNtatNVAGLWSNFFDSTSALSSNASSTAERQSMLDSGNSLATRFKQLNGQMDSLSNEVNSGL 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 174 DVAVTQVNSLLEQISNVNQQIQSVEPNGylPNDLYDERDRLLDEIskfmpvsLEYTksSGNASATSEGVVTVqlqTSQGA 253
Cdd:PRK12714  162 TSSVDEVNRLTQQIAKINGTIGSSAQNA--APDLLDQRDALVSKL-------VGYT--GGTAVIQDGGFMNV---FTAGG 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 254 ITLLDGKThqvnAISLKTNQDSYV-TEIHI-----GDEIRNLESFPQGKLKGLIEAsgyidnsgnKTGVYASMIDDLDEM 327
Cdd:PRK12714  228 QALVVGTT----ASKLTTVADPYQpTKLQVamqtqGQNVSLSPSSLGGQIGGLLEF---------RSSVLEPTQAELGRL 294

                         330       340
                  ....*....|....*....|....*...
gi 2713510040 328 AYEFVNWFNDKHQQGVTLDGDPGMSFFN 355
Cdd:PRK12714  295 AVGMASSFNAGHSQGMDLYGAMGGNFFN 322
flgK PRK12715
flagellar hook-associated protein FlgK; Provisional
 8-358 6.12e-17

flagellar hook-associated protein FlgK; Provisional


Pssm-ID: 183698 [Multi-domain]  Cd Length: 649  Bit Score: 84.02  E-value: 6.12e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040   8 LQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLetfpaypAPGMNQTGTAGQIGMGVEASTVERIRDTFLDTQYRD 87
Cdd:PRK12715    4 LNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQF-------TPIASNRYAGSYIGAGVSVSSIYRNVDQFANAQVRS 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040  88 ETIKVGYWDARAGALEKMEEIMnepTEDG--LSAVFNQFFESIQDVASHPSEAGARSVMIERAEAVGDTFSYLSTSLKTV 165
Cdd:PRK12715   77 TLSYRTQYDAFYNQAIQIDKLL---SQDGssISVPLQTFFDSIGQLNSTPDNIATRGVVLKQSQLLAQQFNSLQTKLEEY 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 166 QGDLQNERDVAVTQVNSLLEQISNVNQQIQSvepNGYLPnDLYDERDRLLDEISKFMPVSLeytkssgnasaTSEGVVTV 245
Cdd:PRK12715  154 ERNSTLQVTESVKIINRITKELAEVNGKLLG---NNNIP-ELLDHRDELLKQLSGYTDLSI-----------FDQGDGTI 218

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2713510040 246 QLQTSQGaiTLLDGKTHQVNAIsLKTNQDS-YVTEIHIGDEIRNLESFPQGKLKGLIeaSGYIDNSGNKTGVYASMIddl 324
Cdd:PRK12715  219 SVGIASG--DMLVAGTQQRDLV-VGTGKDSiFGTKIFLSSGGNNQVDITDRLTTGML--GGLIDYEKNVLGQASQLI--- 290

                         330       340       350
                  ....*....|....*....|....*....|....
gi 2713510040 325 DEMAYEFVNWFNDKHQQGVTLDGDPGMSFFNEIS 358
Cdd:PRK12715  291 GQMAIGLAQTFNAQHKLGMDMNSQIGKDFFTDFN 324
Flg_bbr_C pfam06429
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of ...
 424-500 1.15e-11

Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which pfam00460 is often present at the extreme N terminus.


Pssm-ID: 428939 [Multi-domain]  Cd Length: 74  Bit Score: 60.36  E-value: 1.15e-11
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2713510040 424 DGFYQSVIGQMSVDAQQANRLKsnsetlQGAVEqrrqsTSAVSLDEEMTNMIQFQHAYNASARMVTMIDEMLDKIVN 500
Cdd:pfam06429   8 DNLFRETDGAPILGAGADGRVQ------QGYLE-----GSNVNPVEEMVNMIEAQRAYEANSKVIQTADEMLQTANQ 73
FlgG COG4786
Flagellar basal body rod protein FlgG [Cell motility];
8-76 2.67e-10

Flagellar basal body rod protein FlgG [Cell motility];


Pssm-ID: 443816 [Multi-domain]  Cd Length: 260  Bit Score: 60.98  E-value: 2.67e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2713510040   8 LQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLETFPA-------YPAPGMNQTGTAGQIGMGVEASTVERI 76
Cdd:COG4786     1 LYTAASGMLAQQTRLDVISNNLANVNTTGFKRDRAVFEDLLYqlirrpgAPSSQGTQTPVGLQLGTGVRVAATQTD 76
FlgEFG_subfam TIGR03506
flagellar hook-basal body protein; This model encompasses three closely related flagellar ...
 7-78 1.10e-09

flagellar hook-basal body protein; This model encompasses three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. The names have often been mis-assigned, however. Three equivalog models, TIGR02489, TIGR02490 and TIGR02488, respectively, separate the individual forms into three genome-context consistent groups. The major differences between these genes are architectural, with variable central sections between relatively conserved N- and C-terminal domains. More distantly related are two other flagellar apparatus familis, FlgC (TIGR01395) which consists of little else but the N-and C-terminal domains and FlgK (TIGR02492) with a substantial but different central domain.


Pssm-ID: 274616 [Multi-domain]  Cd Length: 231  Bit Score: 58.80  E-value: 1.10e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2713510040   7 GLQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLETFPAypapgmNQTGTAGQIGMGVEASTVERIRD 78
Cdd:TIGR03506   2 ALYTALSGLNAQSSALDVIANNIANANTTGFKRSRAEFQDLLS------QSVSGSGQVGGGVRTSGVATDFS 67
FlgG COG4786
Flagellar basal body rod protein FlgG [Cell motility];
447-503 1.63e-09

Flagellar basal body rod protein FlgG [Cell motility];


Pssm-ID: 443816 [Multi-domain]  Cd Length: 260  Bit Score: 58.67  E-value: 1.63e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2713510040 447 NSETLQGAVEQrrqstSAVSLDEEMTNMIQFQHAYNASARMVTMIDEMLDKIVNGLG 503
Cdd:COG4786   209 LGTLRQGYLEG-----SNVDVVEEMVDMIEAQRAYEANSKVIQTADEMLGKANNLRG 260
flgG PRK12693
flagellar basal body rod protein FlgG; Provisional
 8-76 7.65e-07

flagellar basal body rod protein FlgG; Provisional


Pssm-ID: 183687 [Multi-domain]  Cd Length: 261  Bit Score: 50.63  E-value: 7.65e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2713510040   8 LQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLE-------TFPAYPAPGMNQTGTAGQIGMGVEASTVERI 76
Cdd:PRK12693    5 LWIAKTGLDAQQTNIDVISNNLANVNTTGFKKSRAVFEdllyqtiRQPGAQSSQNTTLPSGLQVGTGVRPVATQKI 80
FlgE COG1749
Flagellar hook protein FlgE [Cell motility];
14-76 1.55e-06

Flagellar hook protein FlgE [Cell motility];


Pssm-ID: 441355 [Multi-domain]  Cd Length: 414  Bit Score: 50.56  E-value: 1.55e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2713510040  14 GMDAQQAALYTIGHNVSNANTPGYTRQRVSLETFPAypapGMNQTGTAGQIGMGVEASTVERI 76
Cdd:COG1749    11 GLNAASTALDVIGNNIANSNTVGFKSSRAEFADLVA----QSLSGANPTQVGGGVRVASVAQI 69
flgG PRK12693
flagellar basal body rod protein FlgG; Provisional
 450-500 3.69e-06

flagellar basal body rod protein FlgG; Provisional


Pssm-ID: 183687 [Multi-domain]  Cd Length: 261  Bit Score: 48.32  E-value: 3.69e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2713510040 450 TLQGAVEqrrqsTSAVSLDEEMTNMIQFQHAYNASARMVTMIDEMLDKIVN 500
Cdd:PRK12693  214 LRQGFLE-----TSNVNVVEELVNMITGQRAYEMNSKAISTADQMLQYVNQ 259
FlgE COG1749
Flagellar hook protein FlgE [Cell motility];
453-500 5.31e-06

Flagellar hook protein FlgE [Cell motility];


Pssm-ID: 441355 [Multi-domain]  Cd Length: 414  Bit Score: 48.63  E-value: 5.31e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 2713510040 453 GAVEQrrqstSAVSLDEEMTNMIQFQHAYNASARMVTMIDEMLDKIVN 500
Cdd:COG1749   369 GALES-----SNVDLAEELVNMIVAQRAYQANAKVITTSDEMLQTLVN 411
flgE PRK05682
flagellar hook protein FlgE; Validated
 7-73 8.71e-06

flagellar hook protein FlgE; Validated


Pssm-ID: 235557 [Multi-domain]  Cd Length: 407  Bit Score: 47.91  E-value: 8.71e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2713510040   7 GLQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSletFPAYPAPgmNQTGTAGQIGMGVEASTV 73
Cdd:PRK05682    2 SFNTAVSGLNAASNRLDVIGNNIANANTTGFKSSRAE---FADLYAN--SAGTNPTQVGSGVKVAGV 63
flgG PRK12816
flagellar basal body rod protein FlgG; Reviewed
 8-76 2.54e-05

flagellar basal body rod protein FlgG; Reviewed


Pssm-ID: 183766 [Multi-domain]  Cd Length: 264  Bit Score: 45.95  E-value: 2.54e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2713510040   8 LQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLETF-------PAYPAPGMNQTGTAGQIGMGVEASTVERI 76
Cdd:PRK12816    5 LWTAASGMNAQQFNIDTIANNLANVNTTGFKKIRAEFEDLiyqtqrrAGTPATEDTVTPLGVQVGHGVKVAATQRL 80
flgC PRK12632
flagellar basal body rod protein FlgC; Provisional
 1-46 6.86e-05

flagellar basal body rod protein FlgC; Provisional


Pssm-ID: 183637 [Multi-domain]  Cd Length: 130  Bit Score: 42.49  E-value: 6.86e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 2713510040   1 MSSTFHGLQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLET 46
Cdd:PRK12632    1 MTDFSKSLSVSASGMRAQALRLRHVSENIANADTPGYRRKTVSFQE 46
Flg_bb_rod pfam00460
Flagella basal body rod protein;
8-37 2.75e-04

Flagella basal body rod protein;


Pssm-ID: 459821 [Multi-domain]  Cd Length: 30  Bit Score: 38.32  E-value: 2.75e-04
                          10        20        30
                  ....*....|....*....|....*....|
gi 2713510040   8 LQVAKRGMDAQQAALYTIGHNVSNANTPGY 37
Cdd:pfam00460   1 LYTAVSALNAQQIRLDVIANNIANANTPGY 30
flgG_G_neg TIGR02488
flagellar basal-body rod protein FlgG, Gram-negative bacteria; This family consists of the ...
 449-500 5.07e-04

flagellar basal-body rod protein FlgG, Gram-negative bacteria; This family consists of the FlgG protein of the flagellar apparatus in the Proteobacteria and spirochetes. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 131541 [Multi-domain]  Cd Length: 259  Bit Score: 41.95  E-value: 5.07e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2713510040 449 ETLQGAVEQrrqstSAVSLDEEMTNMIQFQHAYNASARMVTMIDEMLDKIVN 500
Cdd:TIGR02488 211 KLRQGFLEA-----SNVNVVQEMVDMITAQRAYEMNSKAIQASDQMLQTVSQ 257
flgG PRK12817
flagellar basal body rod protein FlgG; Reviewed
 444-502 5.66e-04

flagellar basal body rod protein FlgG; Reviewed


Pssm-ID: 183767 [Multi-domain]  Cd Length: 260  Bit Score: 41.60  E-value: 5.66e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2713510040 444 LKSNSETLQGAVEQrrqstSAVSLDEEMTNMIQFQHAYNASARMVTMIDEMLdKIVNGL 502
Cdd:PRK12817  206 LNNDVDILQGYLEN-----SNVDLGKEMTDMIITQRAFQLSSKGIKTADEMW-GIINNM 258
flgG PRK12692
flagellar basal body rod protein FlgG; Reviewed
 8-76 6.24e-03

flagellar basal body rod protein FlgG; Reviewed


Pssm-ID: 139158 [Multi-domain]  Cd Length: 262  Bit Score: 38.67  E-value: 6.24e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2713510040   8 LQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLETFpAYPAPGM----NQTGT-----AGQIGMGVEASTVERI 76
Cdd:PRK12692    4 LAIAATGMSAQQLNLEVIANNIANLNTTGFKGARAEFTDL-LYQAERQqgvpNQAGQeavpeGAMLGLGVRAAAIRNL 80
flgB PRK12623
flagellar basal body rod protein FlgB; Provisional
 12-45 7.36e-03

flagellar basal body rod protein FlgB; Provisional


Pssm-ID: 183630  Cd Length: 131  Bit Score: 36.69  E-value: 7.36e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 2713510040  12 KRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLE 45
Cdd:PRK12623   17 KKGLDASSYRGKVISNNIANVNTKGYKRHYVTFE 50
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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