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Conserved domains on  [gi|2785003688|ref|WP_369581031|]
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YfhO family protein [Lentilactobacillus buchneri]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
YfhO super family cl47351
Uncharacterized membrane protein YfhO [Function unknown];
9-1025 6.26e-104

Uncharacterized membrane protein YfhO [Function unknown];


The actual alignment was detected with superfamily member COG4485:

Pssm-ID: 443579 [Multi-domain]  Cd Length: 860  Bit Score: 345.41  E-value: 6.26e-104
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688    9 RKSFQFRTYLIYSIAFLLVCLATYTI-----PWLAGKTLIWNVDGIAQHFPIMAQFQRMLQGTAHQAMsgWSWNLGAGAD 83
Cdd:COG4485      5 RKKKILKKKLLLLLSFLLPLLIMLIVfafrgIYPFGDSFLLAGDGGSQYIPFFAYLREALLSGPGSLF--YSFSFGLGGN 82
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688   84 QLTTFAFYIiGDPFSYLIALFPAAKLELGFQVLILLRLYCVGLSFLAWANER-DFSTHSKLIGTLIYTFSGYNFYVSMHh 162
Cdd:COG4485     83 FYGLLAYYL-GSPFNLLLLLFPASFLPYAILFLTLLKIGLAGLSFYYYLKKLfKINRWAALIFSTLYALSGFVFANSLN- 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  163 PFFLIPMILFPLLAMGIEKVLHKQNWLPLAVAVALALISNFYFAYMLAIGTFVYLLTRYFNIRHNHPEQLKngRIIYGLV 242
Cdd:COG4485    161 IMWLDALILLPLLLLGLERLIREKKPGLYILALALSLISNFYFGYMICIFLVLYFLYRLIIQHKKDIKSRL--KLFLRFI 238
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  243 QGVVTGLLTAGVILIPTLLAVFQSTRIAYHAKFAnglILYPLKYY-LAMPNQLITSTTKDYWLVLN-FCG-LTFLGAVYV 319
Cdd:COG4485    239 VSSLLGGLISAILLLPTVLALLQNGRSYTEFSVS---LFYEYPLFdLLSKLFPGSFDFTQMDGLPNiYVGlLVLLLAILF 315
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  320 LRHFKRYRS----LATIITLTIIALMLPQFSAVANAMSTPS---NRWLFLIVLPMSLATMILVDQLKNLTQNDLRWLIGA 392
Cdd:COG4485    316 FFTKKIYKKkklrLFALLLFLFLSFSLSPLNSAWHGFSAPQwfpYRWSFLFSFLLILLAAEALERLKEIKLKQLLIALIL 395
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  393 SAGLIVLVWITKGFTLKLPQNDLVSYGLLLSFLLLFACQTSLKISPRHVGTILVGLVFINVISAGQGWFSPNNSKNiNSN 472
Cdd:COG4485    396 VIILLLILFLYEKTYEYLTLNSLLLTLLFLALYLLLLLLRKKKKKSRVLAVLLLLLVLVELGINAYYSLGGIGYIS-SSE 474
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  473 LASGSAEQwlHKYYDGAQnglAKNGGFYRTTTIHNYYphrtagNNIPMVLGTHDLGAYYSIQNGSLFQFSRSLDNSQAVV 552
Cdd:COG4485    475 YASYYKEQ--QKLIDEIK---KDDSDFYRIEKTFDRT------KNDPMLYGYNGISHFSSILNGNILDFLGDLGFPSESN 543
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  553 NSVLGEaDGRTTLLNLLGVKYMFAKTDIVKKPQaipYGFHYVRGKNgkivdfpeqpvsglsnhsGTILLKSNLALPLVYT 632
Cdd:COG4485    544 SRYRYL-GNTLLLDSLLGVKYLISKKDTGKKDL---YGFKLLDSSG------------------NYIVYENPNALPLGFT 601
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  633 QKYVISAANYRNMSPLQREQAMLSGAVVEKPVDGVSMTEPQNNIQNVPYTTrlfdehiannpvkavldrlrispnaryrd 712
Cdd:COG4485    602 TDNIISESKLEDLNPLDNQNALLNGLVGEDADYSFTPAEITTVSANITTTN----------------------------- 652
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  713 takkykttlpaNKIRIWEKATGINpnakplqsvlaknhrivaenqaananglhlmdndaqgrhlsYQLNINQpekyrHSE 792
Cdd:COG4485    653 -----------GRLTVKQKDGGIT-----------------------------------------LTLTVPK-----NGD 675
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  793 LYLVIDgishtthstadrlnsltadsiidgtpvsklqkidrirtaLQHPDLGAYTLSVqtpNNFTYVRQlpennlsdYED 872
Cdd:COG4485    676 YYLYLP---------------------------------------LKLPDKNNVTVTV---NGYEITRK--------STG 705
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  873 RQHIVLNLGYAD-NLQKSMTIHFNGVKQLKFRSVKLMAVPfNRQYNTRIQQLQKAGLTSQKVTNNSVSGYTDATErTRIL 951
Cdd:COG4485    706 RDNQLLNLGYFEkGETDTITIQLKKNGTYSLDNLGLYTLD-YDALKKAAAKLKKNALTLTKFSDNKITGTINAKE-DGYL 783
                          970       980       990      1000      1010      1020      1030
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2785003688  952 TTSIPYSTGWHLKIDGQAGDIFKVNHGFVGARIPVGRHFVSLKYQTPGLALGKLVTAVGIIwwLAFLIGAIGRR 1025
Cdd:COG4485    784 FLSIPYDKGWKAKVDGKKVKIKKVNGGFMGVPVPKGKHTIELTYRPPGLKLGLIISILGLL--LLILYILYFRK 855
 
Name Accession Description Interval E-value
YfhO COG4485
Uncharacterized membrane protein YfhO [Function unknown];
9-1025 6.26e-104

Uncharacterized membrane protein YfhO [Function unknown];


Pssm-ID: 443579 [Multi-domain]  Cd Length: 860  Bit Score: 345.41  E-value: 6.26e-104
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688    9 RKSFQFRTYLIYSIAFLLVCLATYTI-----PWLAGKTLIWNVDGIAQHFPIMAQFQRMLQGTAHQAMsgWSWNLGAGAD 83
Cdd:COG4485      5 RKKKILKKKLLLLLSFLLPLLIMLIVfafrgIYPFGDSFLLAGDGGSQYIPFFAYLREALLSGPGSLF--YSFSFGLGGN 82
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688   84 QLTTFAFYIiGDPFSYLIALFPAAKLELGFQVLILLRLYCVGLSFLAWANER-DFSTHSKLIGTLIYTFSGYNFYVSMHh 162
Cdd:COG4485     83 FYGLLAYYL-GSPFNLLLLLFPASFLPYAILFLTLLKIGLAGLSFYYYLKKLfKINRWAALIFSTLYALSGFVFANSLN- 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  163 PFFLIPMILFPLLAMGIEKVLHKQNWLPLAVAVALALISNFYFAYMLAIGTFVYLLTRYFNIRHNHPEQLKngRIIYGLV 242
Cdd:COG4485    161 IMWLDALILLPLLLLGLERLIREKKPGLYILALALSLISNFYFGYMICIFLVLYFLYRLIIQHKKDIKSRL--KLFLRFI 238
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  243 QGVVTGLLTAGVILIPTLLAVFQSTRIAYHAKFAnglILYPLKYY-LAMPNQLITSTTKDYWLVLN-FCG-LTFLGAVYV 319
Cdd:COG4485    239 VSSLLGGLISAILLLPTVLALLQNGRSYTEFSVS---LFYEYPLFdLLSKLFPGSFDFTQMDGLPNiYVGlLVLLLAILF 315
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  320 LRHFKRYRS----LATIITLTIIALMLPQFSAVANAMSTPS---NRWLFLIVLPMSLATMILVDQLKNLTQNDLRWLIGA 392
Cdd:COG4485    316 FFTKKIYKKkklrLFALLLFLFLSFSLSPLNSAWHGFSAPQwfpYRWSFLFSFLLILLAAEALERLKEIKLKQLLIALIL 395
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  393 SAGLIVLVWITKGFTLKLPQNDLVSYGLLLSFLLLFACQTSLKISPRHVGTILVGLVFINVISAGQGWFSPNNSKNiNSN 472
Cdd:COG4485    396 VIILLLILFLYEKTYEYLTLNSLLLTLLFLALYLLLLLLRKKKKKSRVLAVLLLLLVLVELGINAYYSLGGIGYIS-SSE 474
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  473 LASGSAEQwlHKYYDGAQnglAKNGGFYRTTTIHNYYphrtagNNIPMVLGTHDLGAYYSIQNGSLFQFSRSLDNSQAVV 552
Cdd:COG4485    475 YASYYKEQ--QKLIDEIK---KDDSDFYRIEKTFDRT------KNDPMLYGYNGISHFSSILNGNILDFLGDLGFPSESN 543
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  553 NSVLGEaDGRTTLLNLLGVKYMFAKTDIVKKPQaipYGFHYVRGKNgkivdfpeqpvsglsnhsGTILLKSNLALPLVYT 632
Cdd:COG4485    544 SRYRYL-GNTLLLDSLLGVKYLISKKDTGKKDL---YGFKLLDSSG------------------NYIVYENPNALPLGFT 601
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  633 QKYVISAANYRNMSPLQREQAMLSGAVVEKPVDGVSMTEPQNNIQNVPYTTrlfdehiannpvkavldrlrispnaryrd 712
Cdd:COG4485    602 TDNIISESKLEDLNPLDNQNALLNGLVGEDADYSFTPAEITTVSANITTTN----------------------------- 652
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  713 takkykttlpaNKIRIWEKATGINpnakplqsvlaknhrivaenqaananglhlmdndaqgrhlsYQLNINQpekyrHSE 792
Cdd:COG4485    653 -----------GRLTVKQKDGGIT-----------------------------------------LTLTVPK-----NGD 675
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  793 LYLVIDgishtthstadrlnsltadsiidgtpvsklqkidrirtaLQHPDLGAYTLSVqtpNNFTYVRQlpennlsdYED 872
Cdd:COG4485    676 YYLYLP---------------------------------------LKLPDKNNVTVTV---NGYEITRK--------STG 705
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  873 RQHIVLNLGYAD-NLQKSMTIHFNGVKQLKFRSVKLMAVPfNRQYNTRIQQLQKAGLTSQKVTNNSVSGYTDATErTRIL 951
Cdd:COG4485    706 RDNQLLNLGYFEkGETDTITIQLKKNGTYSLDNLGLYTLD-YDALKKAAAKLKKNALTLTKFSDNKITGTINAKE-DGYL 783
                          970       980       990      1000      1010      1020      1030
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2785003688  952 TTSIPYSTGWHLKIDGQAGDIFKVNHGFVGARIPVGRHFVSLKYQTPGLALGKLVTAVGIIwwLAFLIGAIGRR 1025
Cdd:COG4485    784 FLSIPYDKGWKAKVDGKKVKIKKVNGGFMGVPVPKGKHTIELTYRPPGLKLGLIISILGLL--LLILYILYFRK 855
YfhO pfam09586
Bacterial membrane protein YfhO; This protein is a conserved membrane protein. The yfhO gene ...
22-1007 1.46e-90

Bacterial membrane protein YfhO; This protein is a conserved membrane protein. The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system. Some members of this family have been annotated as glycosyl transferases of the PMT family.


Pssm-ID: 430700 [Multi-domain]  Cd Length: 839  Bit Score: 308.44  E-value: 1.46e-90
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688   22 IAFLLVC--LATYTIPWlAGKTLIWNVDGIAQHFPIMAQFQRMLqgtAHQAMSGWSWNLGAGADQLTTFAFYIiGDPFSY 99
Cdd:pfam09586    4 LPLLIMLivFYSRGIYP-FGNSSLLTGDGGQQYVPFFSYLRNTL---HGPGSLFYSFSNGLGGNMFGLLSYYL-LSPFNL 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  100 LIALFPAAKLELGFQVLILLRLYCVGLSFLAWANERDFSTH--SKLIGTLIYTFSGYNFYVSmHHPFFLIPMILFPLLAM 177
Cdd:pfam09586   79 LLFLFPASQLPDAILLITLLKLGLAGLSFAYLLKKRFKKISkwSALLFSTAYALSGFVIYNQ-ENLMWLDALILLPLIIL 157
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  178 GIEKVLHKQNWLPLAVAVALALISNFYFAYMLAIGTFVYLLTRYFNIRHNhpeQLKNGRIIYGLVQGVVTGLLTAGVILI 257
Cdd:pfam09586  158 GLERLIRQRKPGLYIIALALLLITNFYFGYMICIFLVLYFLYRIIAYFKD---IKQRWKQILRFIISSLLSGGLSAFILL 234
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  258 PTLLAVFQSTRIAYhakFANGLILYPLKYYLAMPNQLITS--TTKDYWLVLNFCG-LTFLGAV--YVLRHFKRYRSL--A 330
Cdd:pfam09586  235 PTVLGLLSNKRAYT---EVTIFFTFDIFPLDLLAKLFIGSfdFTQMGGLPNIYVGlLPLLFLIlyFFNKQIKLKEKLafA 311
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  331 TIITLTIIALMLPQFSAVANAMSTPS---NRWLFLIVLPMSLATMILVDQLKNLTQNDLRWLIGASAGLIVLVWITKGFT 407
Cdd:pfam09586  312 LILLFLILSFYLPPLNLFWHGFQAPVwfpYRFSFIFSFLLLLLAAEALQHLKQLKLRKFLALILLLVLLIAYTLRLKLKK 391
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  408 LKLPQN-DLVSYGLLLSFLLLFACQTSLKISPRHVGTILVGLVFINVISAGQGWFSPNNSKNINSNLASGSAEQWLHKYY 486
Cdd:pfam09586  392 HYNFLTqSQLLLTLLFLLLYLLLLLLFQRYKPLRKVVILLLLLVVVLELGINAYLSLNGISNEWQYSSRSLYANYYSSLQ 471
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  487 DGAQNGLAKNGGFYRTTTIHNYYphrtagNNIPMVLGTHDLGAYYSIQNGSLFQFSRSLDNSQAvvNSVLGEADGRTTLL 566
Cdd:pfam09586  472 QLVLILKKKDSGFYRIEKTFDRT------KNDPMKFNYNGISHFSSILNRNILSFLDDLGSRGS--VSRYRYQGGTLLTD 543
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  567 NLLGVKYMFAKTDivkkPQAIPYGFHYVRGKNGKIvdfpeqpvsglSNHSGTILLKSNLALPLVYTQKYVISAANYRNMS 646
Cdd:pfam09586  544 SLLGVKYYIAKAG----ETAIPYPVSPDLKKYGFI-----------KSNGQYTLYKNQYALPLAFATNTQLLKVKLKKEN 608
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  647 PLQREQAMLSGAVVEKpvdgvsmtepqnniQNVPYTTRLFDehiannpvkavldrlrispnaryrdtakkykTTLPANKI 726
Cdd:pfam09586  609 PLDNQNALLNGLTGTK--------------KGKTYFKALNP-------------------------------TKISTQNI 643
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  727 RIWEKatginpnakplqsvlaKNHRIVAENQAANanglhlmdndaqgrhlsYQLNINQPEkyrHSELYLVIDGISHTTHS 806
Cdd:pfam09586  644 TTANK----------------KLTVTINENGGAT-----------------ITFTVTPPT---NGDYYLSLPSILSLNDK 687
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  807 tadrlnsltadsiidgtpvsklqkidrirtalqhpdlgAYTLSVqtpNNFTYVRQlpennlsDYEDRQHIVLNLGY-ADN 885
Cdd:pfam09586  688 --------------------------------------NFTITV---NGQKVSRK-------SNYDYNTQLINLGSrAKG 719
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  886 LQKSMTIHFNGvKQLKFRSVKLMAVPFNRqYNTRIQQLQKAGLTSQKVTNNSVSGYTDATERTRILTTSIPYSTGWHLKI 965
Cdd:pfam09586  720 QTIKITLQLPK-GQLTLNDLQLYRLNYTA-LQKAINQLKQQQLKLTTYSKNSLSGTVNTTKKKQVLFTTIPYDKGWKAKV 797
                          970       980       990      1000
                   ....*....|....*....|....*....|....*....|..
gi 2785003688  966 DGQAGDIFKVNHGFVGARIPVGRHFVSLKYQTPGLALGKLVT 1007
Cdd:pfam09586  798 DGKKVKIKKVNNGFIGVPLPKGKHQITLTYIPPGLKLGLLIS 839
 
Name Accession Description Interval E-value
YfhO COG4485
Uncharacterized membrane protein YfhO [Function unknown];
9-1025 6.26e-104

Uncharacterized membrane protein YfhO [Function unknown];


Pssm-ID: 443579 [Multi-domain]  Cd Length: 860  Bit Score: 345.41  E-value: 6.26e-104
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688    9 RKSFQFRTYLIYSIAFLLVCLATYTI-----PWLAGKTLIWNVDGIAQHFPIMAQFQRMLQGTAHQAMsgWSWNLGAGAD 83
Cdd:COG4485      5 RKKKILKKKLLLLLSFLLPLLIMLIVfafrgIYPFGDSFLLAGDGGSQYIPFFAYLREALLSGPGSLF--YSFSFGLGGN 82
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688   84 QLTTFAFYIiGDPFSYLIALFPAAKLELGFQVLILLRLYCVGLSFLAWANER-DFSTHSKLIGTLIYTFSGYNFYVSMHh 162
Cdd:COG4485     83 FYGLLAYYL-GSPFNLLLLLFPASFLPYAILFLTLLKIGLAGLSFYYYLKKLfKINRWAALIFSTLYALSGFVFANSLN- 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  163 PFFLIPMILFPLLAMGIEKVLHKQNWLPLAVAVALALISNFYFAYMLAIGTFVYLLTRYFNIRHNHPEQLKngRIIYGLV 242
Cdd:COG4485    161 IMWLDALILLPLLLLGLERLIREKKPGLYILALALSLISNFYFGYMICIFLVLYFLYRLIIQHKKDIKSRL--KLFLRFI 238
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  243 QGVVTGLLTAGVILIPTLLAVFQSTRIAYHAKFAnglILYPLKYY-LAMPNQLITSTTKDYWLVLN-FCG-LTFLGAVYV 319
Cdd:COG4485    239 VSSLLGGLISAILLLPTVLALLQNGRSYTEFSVS---LFYEYPLFdLLSKLFPGSFDFTQMDGLPNiYVGlLVLLLAILF 315
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  320 LRHFKRYRS----LATIITLTIIALMLPQFSAVANAMSTPS---NRWLFLIVLPMSLATMILVDQLKNLTQNDLRWLIGA 392
Cdd:COG4485    316 FFTKKIYKKkklrLFALLLFLFLSFSLSPLNSAWHGFSAPQwfpYRWSFLFSFLLILLAAEALERLKEIKLKQLLIALIL 395
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  393 SAGLIVLVWITKGFTLKLPQNDLVSYGLLLSFLLLFACQTSLKISPRHVGTILVGLVFINVISAGQGWFSPNNSKNiNSN 472
Cdd:COG4485    396 VIILLLILFLYEKTYEYLTLNSLLLTLLFLALYLLLLLLRKKKKKSRVLAVLLLLLVLVELGINAYYSLGGIGYIS-SSE 474
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  473 LASGSAEQwlHKYYDGAQnglAKNGGFYRTTTIHNYYphrtagNNIPMVLGTHDLGAYYSIQNGSLFQFSRSLDNSQAVV 552
Cdd:COG4485    475 YASYYKEQ--QKLIDEIK---KDDSDFYRIEKTFDRT------KNDPMLYGYNGISHFSSILNGNILDFLGDLGFPSESN 543
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  553 NSVLGEaDGRTTLLNLLGVKYMFAKTDIVKKPQaipYGFHYVRGKNgkivdfpeqpvsglsnhsGTILLKSNLALPLVYT 632
Cdd:COG4485    544 SRYRYL-GNTLLLDSLLGVKYLISKKDTGKKDL---YGFKLLDSSG------------------NYIVYENPNALPLGFT 601
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  633 QKYVISAANYRNMSPLQREQAMLSGAVVEKPVDGVSMTEPQNNIQNVPYTTrlfdehiannpvkavldrlrispnaryrd 712
Cdd:COG4485    602 TDNIISESKLEDLNPLDNQNALLNGLVGEDADYSFTPAEITTVSANITTTN----------------------------- 652
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  713 takkykttlpaNKIRIWEKATGINpnakplqsvlaknhrivaenqaananglhlmdndaqgrhlsYQLNINQpekyrHSE 792
Cdd:COG4485    653 -----------GRLTVKQKDGGIT-----------------------------------------LTLTVPK-----NGD 675
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  793 LYLVIDgishtthstadrlnsltadsiidgtpvsklqkidrirtaLQHPDLGAYTLSVqtpNNFTYVRQlpennlsdYED 872
Cdd:COG4485    676 YYLYLP---------------------------------------LKLPDKNNVTVTV---NGYEITRK--------STG 705
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  873 RQHIVLNLGYAD-NLQKSMTIHFNGVKQLKFRSVKLMAVPfNRQYNTRIQQLQKAGLTSQKVTNNSVSGYTDATErTRIL 951
Cdd:COG4485    706 RDNQLLNLGYFEkGETDTITIQLKKNGTYSLDNLGLYTLD-YDALKKAAAKLKKNALTLTKFSDNKITGTINAKE-DGYL 783
                          970       980       990      1000      1010      1020      1030
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2785003688  952 TTSIPYSTGWHLKIDGQAGDIFKVNHGFVGARIPVGRHFVSLKYQTPGLALGKLVTAVGIIwwLAFLIGAIGRR 1025
Cdd:COG4485    784 FLSIPYDKGWKAKVDGKKVKIKKVNGGFMGVPVPKGKHTIELTYRPPGLKLGLIISILGLL--LLILYILYFRK 855
YfhO pfam09586
Bacterial membrane protein YfhO; This protein is a conserved membrane protein. The yfhO gene ...
22-1007 1.46e-90

Bacterial membrane protein YfhO; This protein is a conserved membrane protein. The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system. Some members of this family have been annotated as glycosyl transferases of the PMT family.


Pssm-ID: 430700 [Multi-domain]  Cd Length: 839  Bit Score: 308.44  E-value: 1.46e-90
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688   22 IAFLLVC--LATYTIPWlAGKTLIWNVDGIAQHFPIMAQFQRMLqgtAHQAMSGWSWNLGAGADQLTTFAFYIiGDPFSY 99
Cdd:pfam09586    4 LPLLIMLivFYSRGIYP-FGNSSLLTGDGGQQYVPFFSYLRNTL---HGPGSLFYSFSNGLGGNMFGLLSYYL-LSPFNL 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  100 LIALFPAAKLELGFQVLILLRLYCVGLSFLAWANERDFSTH--SKLIGTLIYTFSGYNFYVSmHHPFFLIPMILFPLLAM 177
Cdd:pfam09586   79 LLFLFPASQLPDAILLITLLKLGLAGLSFAYLLKKRFKKISkwSALLFSTAYALSGFVIYNQ-ENLMWLDALILLPLIIL 157
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  178 GIEKVLHKQNWLPLAVAVALALISNFYFAYMLAIGTFVYLLTRYFNIRHNhpeQLKNGRIIYGLVQGVVTGLLTAGVILI 257
Cdd:pfam09586  158 GLERLIRQRKPGLYIIALALLLITNFYFGYMICIFLVLYFLYRIIAYFKD---IKQRWKQILRFIISSLLSGGLSAFILL 234
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  258 PTLLAVFQSTRIAYhakFANGLILYPLKYYLAMPNQLITS--TTKDYWLVLNFCG-LTFLGAV--YVLRHFKRYRSL--A 330
Cdd:pfam09586  235 PTVLGLLSNKRAYT---EVTIFFTFDIFPLDLLAKLFIGSfdFTQMGGLPNIYVGlLPLLFLIlyFFNKQIKLKEKLafA 311
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  331 TIITLTIIALMLPQFSAVANAMSTPS---NRWLFLIVLPMSLATMILVDQLKNLTQNDLRWLIGASAGLIVLVWITKGFT 407
Cdd:pfam09586  312 LILLFLILSFYLPPLNLFWHGFQAPVwfpYRFSFIFSFLLLLLAAEALQHLKQLKLRKFLALILLLVLLIAYTLRLKLKK 391
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  408 LKLPQN-DLVSYGLLLSFLLLFACQTSLKISPRHVGTILVGLVFINVISAGQGWFSPNNSKNINSNLASGSAEQWLHKYY 486
Cdd:pfam09586  392 HYNFLTqSQLLLTLLFLLLYLLLLLLFQRYKPLRKVVILLLLLVVVLELGINAYLSLNGISNEWQYSSRSLYANYYSSLQ 471
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  487 DGAQNGLAKNGGFYRTTTIHNYYphrtagNNIPMVLGTHDLGAYYSIQNGSLFQFSRSLDNSQAvvNSVLGEADGRTTLL 566
Cdd:pfam09586  472 QLVLILKKKDSGFYRIEKTFDRT------KNDPMKFNYNGISHFSSILNRNILSFLDDLGSRGS--VSRYRYQGGTLLTD 543
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  567 NLLGVKYMFAKTDivkkPQAIPYGFHYVRGKNGKIvdfpeqpvsglSNHSGTILLKSNLALPLVYTQKYVISAANYRNMS 646
Cdd:pfam09586  544 SLLGVKYYIAKAG----ETAIPYPVSPDLKKYGFI-----------KSNGQYTLYKNQYALPLAFATNTQLLKVKLKKEN 608
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  647 PLQREQAMLSGAVVEKpvdgvsmtepqnniQNVPYTTRLFDehiannpvkavldrlrispnaryrdtakkykTTLPANKI 726
Cdd:pfam09586  609 PLDNQNALLNGLTGTK--------------KGKTYFKALNP-------------------------------TKISTQNI 643
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  727 RIWEKatginpnakplqsvlaKNHRIVAENQAANanglhlmdndaqgrhlsYQLNINQPEkyrHSELYLVIDGISHTTHS 806
Cdd:pfam09586  644 TTANK----------------KLTVTINENGGAT-----------------ITFTVTPPT---NGDYYLSLPSILSLNDK 687
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  807 tadrlnsltadsiidgtpvsklqkidrirtalqhpdlgAYTLSVqtpNNFTYVRQlpennlsDYEDRQHIVLNLGY-ADN 885
Cdd:pfam09586  688 --------------------------------------NFTITV---NGQKVSRK-------SNYDYNTQLINLGSrAKG 719
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2785003688  886 LQKSMTIHFNGvKQLKFRSVKLMAVPFNRqYNTRIQQLQKAGLTSQKVTNNSVSGYTDATERTRILTTSIPYSTGWHLKI 965
Cdd:pfam09586  720 QTIKITLQLPK-GQLTLNDLQLYRLNYTA-LQKAINQLKQQQLKLTTYSKNSLSGTVNTTKKKQVLFTTIPYDKGWKAKV 797
                          970       980       990      1000
                   ....*....|....*....|....*....|....*....|..
gi 2785003688  966 DGQAGDIFKVNHGFVGARIPVGRHFVSLKYQTPGLALGKLVT 1007
Cdd:pfam09586  798 DGKKVKIKKVNNGFIGVPLPKGKHQITLTYIPPGLKLGLLIS 839
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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