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Conserved domains on  [gi|2689248702|gb|WWP56567|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Spatula clypeata]

Protein Classification

ND4L family protein( domain architecture ID 10009575)

ND4L family protein

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 2.49e-44

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177184  Cd Length: 98  Bit Score: 138.44  E-value: 2.49e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2689248702  1 MSPLHLSFYSAFILSGLGLAFHRTHLVSALLCLESMMLSMFVGLTMWAIESQTPSFTTVPIIMLTFSACEAGTGLAILVA 80
Cdd:MTH00125   1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                         90
                 ....*....|....*...
gi 2689248702 81 STRTHGSDHLHNLNLLQC 98
Cdd:MTH00125  81 TTRTHGSDHLKNLNLLQC 98
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 2.49e-44

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 138.44  E-value: 2.49e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2689248702  1 MSPLHLSFYSAFILSGLGLAFHRTHLVSALLCLESMMLSMFVGLTMWAIESQTPSFTTVPIIMLTFSACEAGTGLAILVA 80
Cdd:MTH00125   1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                         90
                 ....*....|....*...
gi 2689248702 81 STRTHGSDHLHNLNLLQC 98
Cdd:MTH00125  81 TTRTHGSDHLKNLNLLQC 98
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
11-98 9.48e-14

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 61.04  E-value: 9.48e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2689248702 11 AFILSGLGLAFHRTHLVSALLCLESMMLSMFVGLTMWAIESQTPSFTTVPIIMLTFSACEAGTGLAILVASTRTHGSDHL 90
Cdd:pfam00420  8 LLFLIGLYGLLLRRNLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHGTDDV 87


                 ....*...
gi 2689248702 91 HNLNLLQC 98
Cdd:pfam00420 88 DSLNLLKG 95
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 3-96 3.13e-05

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 39.28  E-value: 3.13e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2689248702  3 PLHLSFYSAFILSGLGL--AFHRTHLVSALLCLESMMLSmfVGLTMWAIESQTPSFT--TVPIIMLTFSACEAGTGLAIL 78
Cdd:COG0713    2 PLEHYLILAAILFAIGLygVLTRRNLIVVLMSIELMLNA--VNLNLVAFSRYLGDLDgqVFALFVIAVAAAEVAVGLAII 79

                         90
                 ....*....|....*...
gi 2689248702 79 VASTRTHGSDHLHNLNLL 96
Cdd:COG0713   80 VALYRNRGTIDVDDLNEL 97
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 2.49e-44

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 138.44  E-value: 2.49e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2689248702  1 MSPLHLSFYSAFILSGLGLAFHRTHLVSALLCLESMMLSMFVGLTMWAIESQTPSFTTVPIIMLTFSACEAGTGLAILVA 80
Cdd:MTH00125   1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                         90
                 ....*....|....*...
gi 2689248702 81 STRTHGSDHLHNLNLLQC 98
Cdd:MTH00125  81 TTRTHGSDHLKNLNLLQC 98
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 1-98 3.75e-42

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 133.17  E-value: 3.75e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2689248702  1 MSPLHLSFYSAFILSGLGLAFHRTHLVSALLCLESMMLSMFVGLTMWAIESQTPSFTTVPIIMLTFSACEAGTGLAILVA 80
Cdd:MTH00126   1 MTPVHFSFSSAFILGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAAPMLLLAFSACEASAGLALLVA 80

                         90
                 ....*....|....*...
gi 2689248702 81 STRTHGSDHLHNLNLLQC 98
Cdd:MTH00126  81 TARTHGTDRLQNLNLLQC 98
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 1-98 2.28e-41

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 131.26  E-value: 2.28e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2689248702  1 MSPLHLSFYSAFILSGLGLAFHRTHLVSALLCLESMMLSMFVGLTMWAIESQTPSFTTVPIIMLTFSACEAGTGLAILVA 80
Cdd:MTH00067   1 MSPTYFTFYSAFLLGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSLPMFMLTFSACEASTGLALMVA 80

                         90
                 ....*....|....*...
gi 2689248702 81 STRTHGSDHLHNLNLLQC 98
Cdd:MTH00067  81 TTRTHGTDHLKNLNLLQC 98
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.21e-26

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 93.84  E-value: 1.21e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2689248702  1 MSPLHLSFYSAFILSGLGLAFHRTHLVSALLCLESMMLSMFVGLTMWAIESQTPSFTTVPIIMLTFSACEAGTGLAILVA 80
Cdd:MTH00107   1 MSLIYMNIMLAFTISLLGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMMPIILLVFAACEAAVGLALLVM 80

                         90
                 ....*....|....*...
gi 2689248702 81 STRTHGSDHLHNLNLLQC 98
Cdd:MTH00107  81 VSNTYGTDYVQNLNLLQC 98
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 4-96 7.35e-21

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 79.22  E-value: 7.35e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2689248702  4 LHLSFYSAFILSGLGLAFHRTHLVSALLCLESMMLSMFVGLTMWAIESQTPSFTTVPIIMLTFSACEAGTGLAILVASTR 83
Cdd:MTH00181   1 MMFVFISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLALFSLLSSSSSMLMFGLILLTFSACEAVLGLSLLVATNR 80

                         90
                 ....*....|...
gi 2689248702 84 THGSDHLHNLNLL 96
Cdd:MTH00181  81 THGSDHLLKFNLL 93
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 1-97 8.18e-20

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 76.50  E-value: 8.18e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2689248702  1 MSPLHLSFYSAFILSGLGLAFHRTHLVSALLCLESMMLSMFVGLTMWAIESQTPSFTTVPIIMLTFSACEAGTGLAILVA 80
Cdd:MTH00043   1 MNIILIIILSSFFLGLLGILINRLHLLSILLCLELLLISLFLNISIWSLNYGNFSNLSFSLLLLTLSACEASIGLSLMVL 80

                         90
                 ....*....|....*..
gi 2689248702 81 STRTHGSDHLHNLNLLQ 97
Cdd:MTH00043  81 LSRNHNSDLVASLNLLQ 97
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
11-98 9.48e-14

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 61.04  E-value: 9.48e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2689248702 11 AFILSGLGLAFHRTHLVSALLCLESMMLSMFVGLTMWAIESQTPSFTTVPIIMLTFSACEAGTGLAILVASTRTHGSDHL 90
Cdd:pfam00420  8 LLFLIGLYGLLLRRNLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHGTDDV 87


                 ....*...
gi 2689248702 91 HNLNLLQC 98
Cdd:pfam00420 88 DSLNLLKG 95
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 6-98 3.44e-11

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 54.60  E-value: 3.44e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2689248702  6 LSFYSAFILSGLGLAFHRTHLVSALLCLESMMLSMFVGLTMWAieSQTPSFTTVPIIMLTFSACEAGTGLAILVASTRTH 85
Cdd:MTH00188   7 LVILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGL--SYMEKELYLSLVLLTFAACEASVGLALLVSLIRSH 84

                         90
                 ....*....|...
gi 2689248702 86 GSDHLHNLNLLQC 98
Cdd:MTH00188  85 GSDYVSSLNLIKC 97
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 1-98 1.25e-08

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 47.82  E-value: 1.25e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2689248702  1 MSPLHLSFYSaFILSGLGLAFHRTHLVSALLCLESMMLSMfVGLTMWAIESQTPSFTTVPIIMLTFSACEAGTGLAILVA 80
Cdd:MTH00013   2 MSPLFILSIS-PFISMFNLSLQRKHLLMSLLSLEAMILSL-ALFIPLSLMFANQVNGMLAIVLLTFGACEASLGLSLLVL 79

                         90
                 ....*....|....*...
gi 2689248702 81 STRTHGSDHLHNLNLLQC 98
Cdd:MTH00013  80 MTRSYGNDMLKSLTSNKC 97
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.51e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 47.53  E-value: 1.51e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2689248702  1 MSPLHLSFYSAFILSGLGLAFHRTHLVSALLCLESMMLSMFVGltMWAIESQTPSFTTVPIIMLTFSACEAGTGLAILVA 80
Cdd:MTH00149   2 MFMLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVM--MFSSSGLISFSSYLFLIILTFGACEASLGLSLLVS 79

                         90
                 ....*....|....*...
gi 2689248702 81 STRTHGSDHLHNLNLLQC 98
Cdd:MTH00149  80 LIRLHGNDYVSSLSSLKF 97
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 12-92 1.08e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 45.15  E-value: 1.08e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2689248702 12 FILSGLGLAFHRTHLVSALLCLESMMLSMFVGLTMWAIESQTPSFttVPIIMLTFSACEAGTGLAILVASTRTHGSDHLH 91
Cdd:MTH00162  11 FFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELY--FLLFFLTFSVCEGALGLSILVSMIRSHGNDYFS 88


                 .
gi 2689248702 92 N 92
Cdd:MTH00162  89 S 89
ND4L MTH00180
NADH dehydrogenase subunit 4L; Provisional
 12-97 1.42e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177231  Cd Length: 99  Bit Score: 45.41  E-value: 1.42e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2689248702 12 FILSGLGLAFHRTHLVSALLCLESMMLSMFVGLTMWAIESQTPSFTTVPIIMLTFSACEAGTGLAILVASTRTHGSDHLH 91
Cdd:MTH00180  13 FILGVLGIVLNRSNLIIMLMSIELMLLAISLLFLINSVAIDNLIGQIFTIMILTVAAAESAIGLAILVAYYRIRGTIAVK 92


                 ....*.
gi 2689248702 92 NLNLLQ 97
Cdd:MTH00180  93 SLNLLR 98
ND4L MTH00001
NADH dehydrogenase subunit 4L; Provisional
 12-97 7.77e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177099  Cd Length: 99  Bit Score: 43.51  E-value: 7.77e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2689248702 12 FILSGLGLAFHRTHLVSALLCLESMMLSMFVGLTMWAIESQTPSFTTVPIIMLTFSACEAGTGLAILVASTRTHGSDHLH 91
Cdd:MTH00001  13 FLLGIWGIILNRGHFIIMLVSIELVLLSTFFLFLINSIEIDLLIEQIFTIMGLTIAAAESAIGLAIMVAYYRIRGTISLK 92


                 ....*.
gi 2689248702 92 NLNLLQ 97
Cdd:MTH00001  93 SLNSLR 98
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 3-96 3.13e-05

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 39.28  E-value: 3.13e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2689248702  3 PLHLSFYSAFILSGLGL--AFHRTHLVSALLCLESMMLSmfVGLTMWAIESQTPSFT--TVPIIMLTFSACEAGTGLAIL 78
Cdd:COG0713    2 PLEHYLILAAILFAIGLygVLTRRNLIVVLMSIELMLNA--VNLNLVAFSRYLGDLDgqVFALFVIAVAAAEVAVGLAII 79

                         90
                 ....*....|....*...
gi 2689248702 79 VASTRTHGSDHLHNLNLL 96
Cdd:COG0713   80 VALYRNRGTIDVDDLNEL 97
PRK05715 PRK05715
NADH-quinone oxidoreductase subunit NuoK;
1-96 1.21e-03

NADH-quinone oxidoreductase subunit NuoK;


Pssm-ID: 180218  Cd Length: 100  Bit Score: 35.15  E-value: 1.21e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2689248702   1 MSPLHLSFYSAfILSGLGLA--FHRTHLVSALLCLESMMLSmfVGLTMWAIESQTPSFT--TVPIIMLTFSACEAGTGLA 76
Cdd:PRK05715    2 IPLQHYLILAA-ILFCIGLVglLLRRNAIVVLMSIELMLNA--VNLNFVAFSSYLGDLDgqVFAFFVITVAAAEAAIGLA 78

                          90       100
                  ....*....|....*....|
gi 2689248702  77 ILVASTRTHGSDHLHNLNLL 96
Cdd:PRK05715   79 ILLQLYRNRGTIDVDDLNEL 98
ND4 MTH00127
NADH dehydrogenase subunit 4; Provisional
 67-98 1.92e-03

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177186 [Multi-domain]  Cd Length: 459  Bit Score: 35.70  E-value: 1.92e-03
                          10        20        30
                  ....*....|....*....|....*....|..
gi 2689248702  67 SACEAGTGLAILVASTRTHGSDHLHNLNLLQC 98
Cdd:MTH00127  401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHT 432
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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