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Conserved domains on  [gi|2709198065|gb|WYN07119|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Metophthalmus sp.]

Protein Classification

NADH dehydrogenase subunit 4L( domain architecture ID 10009597)

NADH dehydrogenase subunit 4L is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 20-88 9.81e-15

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177218  Cd Length: 89  Bit Score: 63.25  E-value: 9.81e-15
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2709198065 20 VIKRKHLLLMLLSLEFIMLSLFILMFLYFSLLNYENYFSMIYLTMSVCEGALGLSLLVSMIRTHGNDYF 88
Cdd:MTH00162  19 LSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYF 87
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 20-88 9.81e-15

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 63.25  E-value: 9.81e-15
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2709198065 20 VIKRKHLLLMLLSLEFIMLSLFILMFLYFSLLNYENYFSMIYLTMSVCEGALGLSLLVSMIRTHGNDYF 88
Cdd:MTH00162  19 LSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYF 87
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
20-94 3.90e-06

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 41.40  E-value: 3.90e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2709198065 20 VIKRKHLLLMLLSLEFIMLSLFILMFLYFSLLNY--ENYFSMIYLTMSVCEGALGLSLLVSMIRTHGNDYFHLFNLL 94
Cdd:pfam00420 17 LLLRRNLLRVLLSLELMLNAVNLALVLFGRLTADplPQALILTAIVIAAAEAAVGLALLVRIYRTHGTDDVDSLNLL 93
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 20-88 9.81e-15

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 63.25  E-value: 9.81e-15
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2709198065 20 VIKRKHLLLMLLSLEFIMLSLFILMFLYFSLLNYENYFSMIYLTMSVCEGALGLSLLVSMIRTHGNDYF 88
Cdd:MTH00162  19 LSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYF 87
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 20-93 3.66e-11

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 54.21  E-value: 3.66e-11
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2709198065 20 VIKRKHLLLMLLSLEFIMLSLFILMFLYFSLLNYENYFSMIYLTMSVCEGALGLSLLVSMIRTHGNDYFHLFNL 93
Cdd:MTH00188  21 LLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELYLSLVLLTFAACEASVGLALLVSLIRSHGSDYVSSLNL 94
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 21-94 3.75e-11

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 54.47  E-value: 3.75e-11
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2709198065 21 IKRKHLLLMLLSLEFIMLSLFILMFLYFSLLNYENYFSM--IYLTMSVCEGALGLSLLVSMIRTHGNDYFHLFNLL 94
Cdd:MTH00125  21 FHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMpiILLTFSACEAGTGLALLVATTRTHGSDHLKNLNLL 96
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 22-94 4.96e-10

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 51.38  E-value: 4.96e-10
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2709198065 22 KRKHLLLMLLSLEFIMLSLFILMFLYFSLLNYENYFSMIYLTMSVCEGALGLSLLVSMIRTHGNDYFHLFNLL 94
Cdd:MTH00149  23 QYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLFLIILTFGACEASLGLSLLVSLIRLHGNDYVSSLSSL 95
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 23-94 2.42e-09

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 49.60  E-value: 2.42e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2709198065 23 RKHLLLMLLSLEFIMLSLFILMFLYFSLLNYENYFS--MIYLTMSVCEGALGLSLLVSMIRTHGNDYFHLFNLL 94
Cdd:MTH00067  23 RTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSlpMFMLTFSACEASTGLALMVATTRTHGTDHLKNLNLL 96
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 23-94 3.02e-09

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 49.58  E-value: 3.02e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2709198065 23 RKHLLLMLLSLEFIMLSLFILMFLYFSLLNYENYFS--MIYLTMSVCEGALGLSLLVSMIRTHGNDYFHLFNLL 94
Cdd:MTH00126  23 RTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAapMLLLAFSACEASAGLALLVATARTHGTDRLQNLNLL 96
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 21-94 3.03e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 41.84  E-value: 3.03e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2709198065 21 IKRKHLLLMLLSLEFIMLSLFILMFLYFSLLNY--ENYFSMIYLTMSVCEGALGLSLLVSMIRTHGNDYFHLFNLL 94
Cdd:MTH00107  21 MYRSHLMSSLLCLEGMMLSLFIMATLTILNTHFtlASMMPIILLVFAACEAAVGLALLVMVSNTYGTDYVQNLNLL 96
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
20-94 3.90e-06

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 41.40  E-value: 3.90e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2709198065 20 VIKRKHLLLMLLSLEFIMLSLFILMFLYFSLLNY--ENYFSMIYLTMSVCEGALGLSLLVSMIRTHGNDYFHLFNLL 94
Cdd:pfam00420 17 LLLRRNLLRVLLSLELMLNAVNLALVLFGRLTADplPQALILTAIVIAAAEAAVGLALLVRIYRTHGTDDVDSLNLL 93
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 21-87 7.91e-06

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 40.50  E-value: 7.91e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2709198065 21 IKRKHLLLMLLSLEFIMLSLFILMFLYFSLLNYEN-YFSMIYLTMSVCEGALGLSLLVSMIRTHGNDY 87
Cdd:MTH00013  21 LQRKHLLMSLLSLEAMILSLALFIPLSLMFANQVNgMLAIVLLTFGACEASLGLSLLVLMTRSYGNDM 88
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 20-94 6.03e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 38.00  E-value: 6.03e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2709198065 20 VIKRKHLLLMLLSLEFIMLSLFILMFLYFSLLNYENY--FSMIYLTMSVCEGALGLSLLVSMIRTHGNDYFHLFNLL 94
Cdd:MTH00181  17 SLYKTHLLSLLLCLEGMMLFLFLLLALFSLLSSSSSMlmFGLILLTFSACEAVLGLSLLVATNRTHGSDHLLKFNLL 93
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 20-94 8.12e-05

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 37.98  E-value: 8.12e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2709198065 20 VIKRKHLLLMLLSLEFIMLSLFILMFLYFSLLNYENY--FSMIYLTMSVCEGALGLSLLVSMIRTHGNDYFHLFNLL 94
Cdd:MTH00043  20 LINRLHLLSILLCLELLLISLFLNISIWSLNYGNFSNlsFSLLLLTLSACEASIGLSLMVLLSRNHNSDLVASLNLL 96
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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