|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-329 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 672.00 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 1 LLLATHYTADTNLAFSSVAHM*RDVQFGWLIRNLHANGASLFFICIYLHIGRGLYYGSYLNKETWNIGVVLLLTLMATAF 80
Cdd:MTH00119 50 LFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAF 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 81 VGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIVGLTLVHLTFLHETGSNNP 160
Cdd:MTH00119 130 VGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNP 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 161 LGIPSDCDKIPFHPYYTVKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKL 240
Cdd:MTH00119 210 LGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKL 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 241 GGVLALAASILVLFLTPLLHTSKLRSMTFRPLSQILFWTLVANVLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVLFPL 320
Cdd:MTH00119 290 GGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPL 369
|
....*....
gi 2716363313 321 VAJLENKLL 329
Cdd:MTH00119 370 LGALENKML 378
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-329 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 615.89 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 1 LLLATHYTADTNLAFSSVAHM*RDVQFGWLIRNLHANGASLFFICIYLHIGRGLYYGSYLNKETWNIGVVLLLTLMATAF 80
Cdd:MTH00131 49 LFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAF 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 81 VGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIVGLTLVHLTFLHETGSNNP 160
Cdd:MTH00131 129 VGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNP 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 161 LGIPSDCDKIPFHPYYTVKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKL 240
Cdd:MTH00131 209 LGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKL 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 241 GGVLALAASILVLFLTPLLHTSKLRSMTFRPLSQILFWTLVANVLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVLFPL 320
Cdd:MTH00131 289 GGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPL 368
|
....*....
gi 2716363313 321 VAJLENKLL 329
Cdd:MTH00131 369 AGWLENKAL 377
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-329 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 613.57 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 1 LLLATHYTADTNLAFSSVAHM*RDVQFGWLIRNLHANGASLFFICIYLHIGRGLYYGSYLNKETWNIGVVLLLTLMATAF 80
Cdd:MTH00100 49 LFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAF 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 81 VGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIVGLTLVHLTFLHETGSNNP 160
Cdd:MTH00100 129 MGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNP 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 161 LGIPSDCDKIPFHPYYTVKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKL 240
Cdd:MTH00100 209 SGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKL 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 241 GGVLALAASILVLFLTPLLHTSKLRSMTFRPLSQILFWTLVANVLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVLFPL 320
Cdd:MTH00100 289 GGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPI 368
|
....*....
gi 2716363313 321 VAJLENKLL 329
Cdd:MTH00100 369 ASLIENNLL 377
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-329 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 587.80 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 1 LLLATHYTADTNLAFSSVAHM*RDVQFGWLIRNLHANGASLFFICIYLHIGRGLYYGSYLNKETWNIGVVLLLTLMATAF 80
Cdd:MTH00074 50 LFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAF 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 81 VGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIVGLTLVHLTFLHETGSNNP 160
Cdd:MTH00074 130 VGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNP 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 161 LGIPSDCDKIPFHPYYTVKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKL 240
Cdd:MTH00074 210 TGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKL 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 241 GGVLALAASILVLFLTPLLHTSKLRSMTFRPLSQILFWTLVANVLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVLFPL 320
Cdd:MTH00074 290 GGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPL 369
|
....*....
gi 2716363313 321 VAJLENKLL 329
Cdd:MTH00074 370 TGWLENKLL 378
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-320 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 569.93 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 1 LLLATHYTADTNLAFSSVAHM*RDVQFGWLIRNLHANGASLFFICIYLHIGRGLYYGSYLNKETWNIGVVLLLTLMATAF 80
Cdd:MTH00191 46 LFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAF 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 81 VGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIVGLTLVHLTFLHETGSNNP 160
Cdd:MTH00191 126 LGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNP 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 161 LGIPSDCDKIPFHPYYTVKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKL 240
Cdd:MTH00191 206 LGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 241 GGVLALAASILVLFLTPLLHTSKLRSMTFRPLSQILFWTLVANVLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVLFPL 320
Cdd:MTH00191 286 GGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-318 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 558.24 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 1 LLLATHYTADTNLAFSSVAHM*RDVQFGWLIRNLHANGASLFFICIYLHIGRGLYYGSYLNKETWNIGVVLLLTLMATAF 80
Cdd:MTH00156 39 LFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAF 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 81 VGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIVGLTLVHLTFLHETGSNNP 160
Cdd:MTH00156 119 LGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNP 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 161 LGIPSDCDKIPFHPYYTVKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKL 240
Cdd:MTH00156 199 LGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKL 278
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2716363313 241 GGVLALAASILVLFLTPLLHTSKLRSMTFRPLSQILFWTLVANVLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVLF 318
Cdd:MTH00156 279 GGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIVILLTWIGARPVEEPYILTGQILTILYFLYFIINP 356
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-329 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 550.28 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 1 LLLATHYTADTNLAFSSVAHM*RDVQFGWLIRNLHANGASLFFICIYLHIGRGLYYGSYLNKETWNIGVVLLLTLMATAF 80
Cdd:MTH00145 50 LFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAF 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 81 VGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIVGLTLVHLTFLHETGSNNP 160
Cdd:MTH00145 130 LGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNP 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 161 LGIPSDCDKIPFHPYYTVKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKL 240
Cdd:MTH00145 210 LGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKL 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 241 GGVLALAASILVLFLTPLLHTSKLRSMTFRPLSQILFWTLVANVLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVLfPL 320
Cdd:MTH00145 290 GGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLIL-PL 368
|
....*....
gi 2716363313 321 VAJLENKLL 329
Cdd:MTH00145 369 VQKLWDNIL 377
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-329 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 540.45 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 1 LLLATHYTADTNLAFSSVAHM*RDVQFGWLIRNLHANGASLFFICIYLHIGRGLYYGSYLNKETWNIGVVLLLTLMATAF 80
Cdd:MTH00034 49 IFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAF 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 81 VGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIVGLTLVHLTFLHETGSNNP 160
Cdd:MTH00034 129 VGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNP 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 161 LGIPSDCDKIPFHPYYTVKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKL 240
Cdd:MTH00034 209 TGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKL 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 241 GGVLALAASILVLFLTPLLHTSKLRSMTFRPLSQILFWTLVANVLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVLFPL 320
Cdd:MTH00034 289 GGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPL 368
|
....*....
gi 2716363313 321 VAJLENKLL 329
Cdd:MTH00034 369 ISYLENKLI 377
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-329 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 515.38 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 1 LLLATHYTADTNLAFSSVAHM*RDVQFGWLIRNLHANGASLFFICIYLHIGRGLYYGSYLNKETWNIGVVLLLTLMATAF 80
Cdd:MTH00016 50 LFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAF 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 81 VGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIVGLTLVHLTFLHETGSNNP 160
Cdd:MTH00016 130 LGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNP 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 161 LGIPSDCDKIPFHPYYTVKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKL 240
Cdd:MTH00016 210 LGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKL 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 241 GGVLALAASILVLFLTPLLHTSKLRSMTFRPLSQILFWTLVANVLVLTWVGSQPVEHPFIIIGQLASLSYFTiILVLFPL 320
Cdd:MTH00016 290 GGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFF-YFMINPL 368
|
....*....
gi 2716363313 321 VAJLENKLL 329
Cdd:MTH00016 369 LMKLWDKLL 377
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
3-329 |
1.84e-166 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 468.41 E-value: 1.84e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 3 LATHYTADTNLAFSSVAHM*RDVQFGWLIRNLHANGASLFFICIYLHIGRGLYYGSYLNKETWNIGVVLLLTLMATAFVG 82
Cdd:MTH00022 50 LSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMG 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 83 YVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIVGLTLVHLTFLHETGSNNPLG 162
Cdd:MTH00022 130 YVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIG 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 163 IPSDCDKIPFHPYYTVKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGG 242
Cdd:MTH00022 210 LNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGG 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 243 VLALAASILVLFLTPLLHTSKLRSMTFRPLSQILFWTLVANVLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVLFPLVA 322
Cdd:MTH00022 290 VVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLG 369
|
....*..
gi 2716363313 323 JLENKLL 329
Cdd:MTH00022 370 ELENQLL 376
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-329 |
2.48e-166 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 468.03 E-value: 2.48e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 1 LLLATHYTADTNLAFSSVAHM*RDVQFGWLIRNLHANGASLFFICIYLHIGRGLYYGSYLNKETWNIGVVLLLTLMATAF 80
Cdd:MTH00053 50 IFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAF 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 81 VGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIVGLTLVHLTFLHETGSNNP 160
Cdd:MTH00053 130 IGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNP 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 161 LGIPSDCDKIPFHPYYTVKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKL 240
Cdd:MTH00053 210 IGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKL 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 241 GGVLALAASILVLFLTPLLHTSKLRSMTFRPLSQILFWTLVANVLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVLFPL 320
Cdd:MTH00053 290 GGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPL 369
|
....*....
gi 2716363313 321 VAJLENKLL 329
Cdd:MTH00053 370 AGYLENKLL 378
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-329 |
1.89e-154 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 437.82 E-value: 1.89e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 1 LLLATHYTADTNLAFSSVAHM*RDVQFGWLIRNLHANGASLFFICIYLHIGRGLYYGSYLNKETWNIGVVLLLTLMATAF 80
Cdd:MTH00224 50 LFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAF 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 81 VGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIVGLTLVHLTFLHETGSNNP 160
Cdd:MTH00224 130 LGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNP 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 161 LGIPSDCDKIPFHPYYTVKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKL 240
Cdd:MTH00224 210 IGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKL 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 241 GGVLALAASILVLFLTPLLHTSKLRSMTFRPLSQILFWTLVANVLVLTWVGSQPVEHPFIIIGQLASLSYFTiILVLFPL 320
Cdd:MTH00224 290 GGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFS-YFIISPA 368
|
....*....
gi 2716363313 321 VAJLENKLL 329
Cdd:MTH00224 369 ISKLWDDLL 377
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
1-326 |
1.92e-126 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 366.96 E-value: 1.92e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 1 LLLATHYTADTNLAFSSVAHM*RDVQFGWLIRNLHANGASLFFICIYLHIGRGLYYGSYLNKETWNIGVVLLLTLMATAF 80
Cdd:MTH00033 46 VLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAF 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 81 VGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIVGLTLVHLTFLHETGSNNP 160
Cdd:MTH00033 126 IGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEP 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 161 LGIPSDCDKIPFHPYYTVKDILGFALMLILLVSLALFS--PNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPN 238
Cdd:MTH00033 206 LGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriETLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRSIPN 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 239 KLGGVLALAASILVLFLTPLLHTSKLRSMTFRPLSQILFWTLVANVLVLTWVGSQPV-EHPFIIIGQLASLSYFTIILVL 317
Cdd:MTH00033 286 KLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIILTWIGSAPAgADPYVLIGRIATIFYFGYFLVL 365
|
....*....
gi 2716363313 318 FPLVAJLEN 326
Cdd:MTH00033 366 VPLLGYLSN 374
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-325 |
5.16e-123 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 358.33 E-value: 5.16e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 1 LLLATHYTADTNLAFSSVAHM*RDVQFGWLIRNLHANGASLFFICIYLHIGRGLYYGSY-----LNketWNIGVVLLLTL 75
Cdd:COG1290 58 IFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAYkkpreLN---WIIGVLLLLLT 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 76 MATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FLLPFVIVGLTLVHLTFLHE 154
Cdd:COG1290 135 MAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHR 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 155 TGSNNPLGI----PSDCDKIPFHPYYTVKDILGFALMLILLVSLALFSPNllGDPENFTPANPLVTPPHIKPEWYFLFAY 230
Cdd:COG1290 215 HGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFY 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 231 AILRSIP--NKLGGVLALAASILVLFLTPLLHTSKLRSMTFRPLSQILFWTLVANVLVLTWVGSQPVehPFIIIGQLASL 308
Cdd:COG1290 293 GILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIVLTILGANPP--IATLLGSINTV 370
|
330
....*....|....*..
gi 2716363313 309 SYFTIILVLFPLVAJLE 325
Cdd:COG1290 371 TYFAFFLIVLPILAFIE 387
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
1-318 |
1.95e-108 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 319.96 E-value: 1.95e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 1 LLLATHYTADTNLAFSSVAHM*RDVQFGWLIRNLHANGASLFFICIYLHIGRGLYYGSYLNKETWNIGVVLLLTLMATAF 80
Cdd:MTH00086 38 TFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAF 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 81 VGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIVGLTLVHLTFLHETGSNNP 160
Cdd:MTH00086 118 MGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSS 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 161 LGIPSDCDKIPFHPYYTVKDILGFaLMLILLVSLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKL 240
Cdd:MTH00086 198 LYCHGDYDKICFGPEYWNKDAYNI-IFWLVFIIFSLFYPFNLGDPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKV 276
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2716363313 241 GGVLALAASILVLFLTPLLHTSklrSMTFRPLSQILFWTLVANVLVLTWVGSQPVEHPFIIIGQLASLSYFTIILVLF 318
Cdd:MTH00086 277 LGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVVNVILSWLGQCLVEYPFLFLSQIFSFIYFFLILLML 351
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
2-318 |
3.11e-86 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 263.38 E-value: 3.11e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 2 LLATHYTADTNLAFSSVAHM*RDVQFGWLIRNLHANGASLFFICIYLHIGRGLYYGSYLNKETWNIGVVLLLTLMATAFV 81
Cdd:MTH00046 41 LLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFL 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 82 GYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIVGLTLVHLTFLHETGSNNPL 161
Cdd:MTH00046 121 GYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPL 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 162 GIPSD-CDKIPFHPYYTVKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKL 240
Cdd:MTH00046 201 FSSNGySDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKI 280
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2716363313 241 GGvLALAASILVLFLTPLLHTSKLRSMtfrpLSQILFWTLVANVLVLTWVGSQPVEHPFIIIGQLASLSyFTIILVLF 318
Cdd:MTH00046 281 GG-LVLVLSFLFFLWVPTFNGSSVYSV----WRQVNFWLIVSLFFSLSYLGGCHPEYPYLLISQLFSVL-MVLLLFIF 352
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-158 |
5.12e-74 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 226.87 E-value: 5.12e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 1 LLLATHYTADTNLAFSSVAHM*RDVQFGWLIRNLHANGASLFFICIYLHIGRGLYYGSYLN--KETWNIGVVLLLTLMAT 78
Cdd:cd00284 41 VFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYKKprELTWVIGVILLLLTMAT 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 79 AFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIVGLTLVHLTFLHETGSN 158
Cdd:cd00284 121 AFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
1-156 |
2.19e-65 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 204.15 E-value: 2.19e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 1 LLLATHYTADTNLAFSSVAHM*RDVQFGWLIRNLHANGASLFFICIYLHIGRGLYYG--SYLNKETWNIGVVLLLTLMAT 78
Cdd:pfam00033 32 VFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGgfSYPRELTWVIGVILLVLTMST 111
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2716363313 79 AFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIVGLTLVHLTFLHETG 156
Cdd:pfam00033 112 AFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
159-306 |
1.10e-57 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 183.23 E-value: 1.10e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 159 NPLGIPSDCDKIPFHPYYTVKDILGFALMLILLVSLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPN 238
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2716363313 239 KLGGVLALAASILVLFLTPLLHTSKLRSmTFRPLSQILFWTLVANVLVLTWVGSQPVEHPFIIIGQLA 306
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
210-310 |
1.17e-48 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 158.41 E-value: 1.17e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 210 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILVLFLTPLLHTSKLRSMTFRPLSQILFWTLVANVLVLTW 289
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 2716363313 290 VGSQPVEHPFIIIGQLASLSY 310
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
40-205 |
3.43e-46 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 154.32 E-value: 3.43e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 40 SLFFICIYLHIGRGLYYGSYLNKE--TWNIGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAW 117
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 118 GGFSVDNPTLTRFFALHF-LLPFVIVGLTLVHLTFLHETGSNNPLGIPSDCDKIPFHPYYTVKDILGFALMLILLVSLAL 196
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 2716363313 197 FSPNLLGDP 205
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
3-161 |
2.48e-30 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 114.81 E-value: 2.48e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 3 LATHYTADTNLAFSSVAHM*RDVQFGWLIRNLHANGASLFFICIYLHIGRGLYYGSYLNKE--TWNIGVVLLLTLMATAF 80
Cdd:PRK03735 62 LTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRelNWVVGVLIFFVTVGLGF 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 81 VGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FLLPFVIVGLTLVHLTFLHETGSNN 159
Cdd:PRK03735 142 TGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWALAVLMLAHFLMIRKQGISG 221
|
..
gi 2716363313 160 PL 161
Cdd:PRK03735 222 PL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
6-161 |
1.55e-27 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 107.11 E-value: 1.55e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 6 HYTADTNLAFSSVAHM*RDVQFGWLIRNLHANGASLFFICIYLHIGRGLYYGSYLNKE--TWNIGVVLLLTLMATAFVGY 83
Cdd:CHL00070 57 YYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRelTWVTGVVLAVLTVSFGVTGY 136
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2716363313 84 VLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FLLPFVIVGLTLVHLTFLHETGSNNPL 161
Cdd:CHL00070 137 SLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSLHtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
181-291 |
2.22e-12 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 64.25 E-value: 2.22e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 181 ILGfalMLILLVSLALFSPNLLGDPenftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILVLFLTPLL- 259
Cdd:CHL00058 44 ILG---TIACNVGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLe 115
|
90 100 110
....*....|....*....|....*....|..
gi 2716363313 260 HTSKLRSMTFRPLSQILFwtlVANVLVLTWVG 291
Cdd:CHL00058 116 NVNKFQNPFRRPVATTVF---LIGTAVALWLG 144
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
190-291 |
3.05e-12 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 63.66 E-value: 3.05e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 190 LLVSLALFSPNLLGDPenftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILVLFLTPLLHT-SKLRSMT 268
Cdd:COG5679 51 LCIGLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENvNKFQNPF 125
|
90 100
....*....|....*....|...
gi 2716363313 269 FRPLSQILFwtlVANVLVLTWVG 291
Cdd:COG5679 126 RRPVATAVF---LFGTLVTLWLG 145
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
188-291 |
2.89e-11 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 60.97 E-value: 2.89e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2716363313 188 LILLVSLALFSPNLLGDPenftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILVLFLTPLLHT-SKLRS 266
Cdd:TIGR01156 48 IACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENvNKFQN 122
|
90 100
....*....|....*....|....*
gi 2716363313 267 MTFRPLSQILFwtlVANVLVLTWVG 291
Cdd:TIGR01156 123 PFRRPVATTVF---LFGTVVALWLG 144
|
|
|