NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|2745580292|gb|XBW51382|]
View 

NADH dehydrogenase subunit 3 (mitochondrion) [Salvelinus umbla]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009581)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 4.63e-67

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 197.45  E-value: 4.63e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292   1 MNLITTILAITITLSAVLATISFWLPQISPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2745580292  81 QLTTPALTLAWSTAVLALLTLGLIYEWTQGGLEWAE 116
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 4.63e-67

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 197.45  E-value: 4.63e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292   1 MNLITTILAITITLSAVLATISFWLPQISPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2745580292  81 QLTTPALTLAWSTAVLALLTLGLIYEWTQGGLEWAE 116
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-113 4.86e-31

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 105.58  E-value: 4.86e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292  20 TISFWLPQISPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLlpLPWGDQLTTPALTLAWSTAV-LAL 98
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFGFVEMLIfIAI 79

                          90
                  ....*....|....*
gi 2745580292  99 LTLGLIYEWTQGGLE 113
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 16-114 3.20e-25

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 91.34  E-value: 3.20e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292  16 AVLATISFWLPQISPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLlpLPWGDQLTTPALTLAWSTAV 95
Cdd:COG0838    20 LAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRELGWFGLIEMLV 97

                          90       100
                  ....*....|....*....|
gi 2745580292  96 -LALLTLGLIYEWTQGGLEW 114
Cdd:COG0838    98 fIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 4.63e-67

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 197.45  E-value: 4.63e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292   1 MNLITTILAITITLSAVLATISFWLPQISPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2745580292  81 QLTTPALTLAWSTAVLALLTLGLIYEWTQGGLEWAE 116
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 15-116 3.31e-58

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 175.18  E-value: 3.31e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292  15 SAVLATISFWLPQISPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGDQLTTPALTLAWSTA 94
Cdd:MTH00069   13 SLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLNTPTNTLFWSTL 92

                          90       100
                  ....*....|....*....|..
gi 2745580292  95 VLALLTLGLIYEWTQGGLEWAE 116
Cdd:MTH00069   93 ILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 15-115 4.62e-53

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 161.97  E-value: 4.62e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292  15 SAVLATISFWLPQISPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGDQLTTPALTLAWSTA 94
Cdd:MTH00113   14 STILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINLTTPTTTLTWATI 93

                          90       100
                  ....*....|....*....|.
gi 2745580292  95 VLALLTLGLIYEWTQGGLEWA 115
Cdd:MTH00113   94 ILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 15-116 6.11e-47

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 146.62  E-value: 6.11e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292  15 SAVLATISFWLPQISPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGDQLTTPALTLAWSTA 94
Cdd:MTH00106   14 ASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALL 93

                          90       100
                  ....*....|....*....|..
gi 2745580292  95 VLALLTLGLIYEWTQGGLEWAE 116
Cdd:MTH00106   94 LISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-114 3.10e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 131.94  E-value: 3.10e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292   1 MNLITTILAITITLSAVLATISFWLPQISPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00203    1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2745580292  81 QLTTPALTLAwsTAVLALLTLGLIYEWTQGGLEW 114
Cdd:MTH00203   81 QLSSLSLLLA--FLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-116 6.72e-41

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 131.26  E-value: 6.72e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292   1 MNLITTILAITITLSAVLATISFWLPQISPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00042    1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2745580292  81 QLTTPALTLAWSTAVLALLTLGLIYEWTQGGLEWAE 116
Cdd:MTH00042   81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 31-114 2.07e-31

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 107.17  E-value: 2.07e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292  31 DAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGDQLTTPALTLAWSTAVLALLTLGLIYEWTQG 110
Cdd:MTH00161   30 DREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILLLGLYYEWNQG 109


                  ....
gi 2745580292 111 GLEW 114
Cdd:MTH00161  110 ALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-113 4.86e-31

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 105.58  E-value: 4.86e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292  20 TISFWLPQISPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLlpLPWGDQLTTPALTLAWSTAV-LAL 98
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFGFVEMLIfIAI 79

                          90
                  ....*....|....*
gi 2745580292  99 LTLGLIYEWTQGGLE 113
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 15-116 1.29e-30

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 105.32  E-value: 1.29e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292  15 SAVLATISFWLPQISP-DAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGDQLTTPALTLAWST 93
Cdd:MTH00148   15 SPVLLLLGLVLSKRSYsDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSFSVWSLTSLF 94

                          90       100
                  ....*....|....*....|...
gi 2745580292  94 AVLALLTLGLIYEWTQGGLEWAE 116
Cdd:MTH00148   95 IFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 15-114 3.99e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 96.32  E-value: 3.99e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292  15 SAVLATISFWLPQISPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLlpLPWGDQLTTPALTLAWSTA 94
Cdd:MTH00055   19 STVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYNQIGLFGFWVMY 96

                          90       100
                  ....*....|....*....|.
gi 2745580292  95 V-LALLTLGLIYEWTQGGLEW 114
Cdd:MTH00055   97 LfLIILTIGLIYEWVKGGLEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 15-114 1.04e-25

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 92.82  E-value: 1.04e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292  15 SAVLATISFWLPQISPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLlpLPWGDQLTTPALTLAWSTA 94
Cdd:MTH00018   14 SALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFL--FPWCVLYNQIAPFGFWTMV 91

                          90       100
                  ....*....|....*....|.
gi 2745580292  95 V-LALLTLGLIYEWTQGGLEW 114
Cdd:MTH00018   92 GfLFILTLGLIYEWIKGGLEW 112
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 31-116 1.32e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 92.36  E-value: 1.32e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292  31 DAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGDQLTTPALTLAWSTAVLALLTLGLIYEWTQG 110
Cdd:MTH00202   32 DREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKGGLLGGTIFLLILIGGLIHEWKEG 111


                  ....*.
gi 2745580292 111 GLEWAE 116
Cdd:MTH00202  112 SLDWVK 117
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 16-114 3.20e-25

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 91.34  E-value: 3.20e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292  16 AVLATISFWLPQISPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLlpLPWGDQLTTPALTLAWSTAV 95
Cdd:COG0838    20 LAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRELGWFGLIEMLV 97

                          90       100
                  ....*....|....*....|
gi 2745580292  96 -LALLTLGLIYEWTQGGLEW 114
Cdd:COG0838    98 fIAILLVGLIYAWKKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 16-115 4.53e-25

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 91.46  E-value: 4.53e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292  16 AVLATISFWLPQISPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLlpLPWGDQLTTPALTLAWSTAV 95
Cdd:PRK06602   23 ILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGWLGFVEAMI 100

                          90       100
                  ....*....|....*....|.
gi 2745580292  96 -LALLTLGLIYEWTQGGLEWA 115
Cdd:PRK06602  101 fILVLLVGLVYLWRKGALDWE 121
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 29-115 1.22e-24

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 90.30  E-value: 1.22e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292  29 SPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWGDQLTTPALTLAWSTAVLALLTLGLIYEWT 108
Cdd:MTH00012   30 TADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVVYTSILFLLILVIGLIHEWR 109


                  ....*..
gi 2745580292 109 QGGLEWA 115
Cdd:MTH00012  110 EGSLDWS 116
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 30-114 9.59e-19

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 75.35  E-value: 9.59e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292  30 PDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLlpLPWGDQLTTPALTLAWST-AVLALLTLGLIYEWT 108
Cdd:MTH00030   39 PDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNLFSFWIVyTFLIVLAIGLAYEWI 116


                  ....*.
gi 2745580292 109 QGGLEW 114
Cdd:MTH00030  117 KGGLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 20-114 2.58e-12

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 58.46  E-value: 2.58e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292  20 TISFWLPQISPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLlpLPWG---DQLTTPALTLAwSTAVL 96
Cdd:CHL00022   26 LISGLLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAmsfDVLGVSAFIEA-LIFVL 102

                          90
                  ....*....|....*...
gi 2745580292  97 aLLTLGLIYEWTQGGLEW 114
Cdd:CHL00022  103 -ILIVGLVYAWRKGALEW 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
20-114 1.60e-10

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 53.98  E-value: 1.60e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292  20 TISFWLPQISPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPlpWG---DQLTTPALTLAwsTAVL 96
Cdd:PRK07756   28 TLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAvayDKLGLFALIEM--LIFV 103

                          90
                  ....*....|....*...
gi 2745580292  97 ALLTLGLIYEWTQGGLEW 114
Cdd:PRK07756  104 VMLLVGLAYAWKKKVLQW 121
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 34-114 1.28e-09

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 51.60  E-value: 1.28e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292  34 KLSPYECGFDPLGSARLP--FSLRFFLIAILFLLFDLEIALLLPlpWG---DQLTTPALTlawsTAVLALLTLGL--IYE 106
Cdd:PRK07928   37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAvsfDALGVFGLV----EMALFMLTVFVayAYV 110


                  ....*...
gi 2745580292 107 WTQGGLEW 114
Cdd:PRK07928  111 WRRGGLEW 118
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
34-114 9.04e-09

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 49.67  E-value: 9.04e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580292  34 KLSPYECGFDPLGSARlPFSLRFFLIAILFLLFDLEIALLlpLPWG-DQLTTPALTLAWSTAVLALLTLGLIYEWTQGGL 112
Cdd:PRK08489   47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAvDFKLLGLFGLIEMLLFIVLLTIGFIYAWKKGAL 123


                  ..
gi 2745580292 113 EW 114
Cdd:PRK08489  124 EW 125
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 34-74 1.96e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 45.66  E-value: 1.96e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 2745580292  34 KLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLL 74
Cdd:MTH00092   34 KVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 36-77 1.03e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 41.42  E-value: 1.03e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 2745580292  36 SPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLP 77
Cdd:MTH00060   39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH