|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
7.93e-141 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 411.06 E-value: 7.93e-141
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 1 MLKLLFYMALLPLITLYTPTYMIWTSLSALLIMSMVLLMIIFMPKISsLPLITPMLYLDSLSLALLLLTLWTSALMIIAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAP-YSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 81 FSILNTNKAPKLFCINLTTLNLFLFLTFSTNNYLMFYIFFEASLIPTLIMILGWGYQPERLQAGMYLILYTVTASLPLLM 160
Cdd:MTH00014 80 FKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLM 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 161 SISMIFNFNSTLYMLSVLAPPTSFHTLTMWWFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLR 240
Cdd:MTH00014 160 SILLIFYTNNSLSMLMSSMEPPSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLR 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 241 LSSPFWWLSSTTLAPlFSALSLWGAVITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSS 320
Cdd:MTH00014 240 MSSLFMHINKSLSAP-FSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSS 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 321 ALFAIANMTYETTNTRNMLLNKGLLSLFPSMSLWWFLLSAANMGAPPSINLLSEIILLTSIVTLTNLFMIPLVMCSFISG 400
Cdd:MTH00014 319 ALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAA 398
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2755227892 401 AYSLILYTTTQHGSPSKYMNTMKLFTPRNHLTISMHIFPLFLLIMKPDMVLSWL 454
Cdd:MTH00014 399 AYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNWL 452
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
76-454 |
2.87e-118 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 352.22 E-value: 2.87e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 76 MIIASFSILNTNKAPKLFCINLTTLNLFLFLTFSTNNYLMFYIFFEASLIPTLIMILGWGYQPERLQAGMYLILYTVTAS 155
Cdd:MTH00150 40 MMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGAS 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 156 LPLLMSISMIFNFNSTLYMLSVLAPPTSFHTLTMWWFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGG 235
Cdd:MTH00150 120 LPLLLVILWMSSSYGSSFMLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGG 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 236 YGLLRLSSPFWWLSSTTLAPLFSaLSLWGAVITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAH 315
Cdd:MTH00150 200 YGILRMMMVFSLSSSSFSIFLIS-LSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSH 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 316 GLCSSALFAIANMTYETTNTRNMLLNKGLLSLFPSMSLWWFLLSAANMGAPPSINLLSEIILLTSIVTLTNLFMIPLVMC 395
Cdd:MTH00150 279 GFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLM 358
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2755227892 396 SFISGAYSLILYTTTQHGSPSKYMNTMKLFTPRNHLTISMHIFPLFLLIMKPDMVLSWL 454
Cdd:MTH00150 359 VFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSDLLFMWI 417
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
4-449 |
3.88e-109 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 330.02 E-value: 3.88e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 4 LLFYMALLPLITLYTPTYMIWTSLSALLIMSMVLLMIIFMPKISSLPLITPMLYLDSLSLALLLLTLWTSALMIIASFSI 83
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 84 LNTNKAPKLFCINLTTLNLFLFLTFSTNNYLMFYIFFEASLIPTLIMILGWGYQPERLQAGMYLILYTVTASLPLLMSIS 163
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 164 MIFNFNSTLYMLSVLAPPTSFHTLTMWWFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLRLSS 243
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 244 PFWWLSSTTLaPLFSALSLWGAVITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALF 323
Cdd:MTH00205 241 MLYKLNSNFS-ELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMF 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 324 AIANMTYETTNTRNMLLNKGLLSLFPSMSLWWFLLSAANMGAPPSINLLSEIILLTSIVTLTNLFMIPLVMCSFISGAYS 403
Cdd:MTH00205 320 ALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYS 399
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 2755227892 404 LILYTTTQHGSPSKYMNTMKLFTPRNHLTISMHIFPLFLLIMKPDM 449
Cdd:MTH00205 400 LYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKI 445
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-453 |
1.52e-108 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 328.27 E-value: 1.52e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 1 MLKLLFYMALLPLITLYTPTYMiwtsLSALLIMSMVLLMIIFMPKISSLPLITPMLYLDSLSLALLLLTLWTSALMIIAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWW----LVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 81 FSILNTNKAPKLFCINLTTLNLFLFLTFSTNNYLMFYIFFEASLIPTLIMILGWGYQPERLQAGMYLILYTVTASLPLLM 160
Cdd:MTH00163 77 ESVYKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLV 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 161 SISMIFNFNSTLYMLSVLappTSFHTLTMWWFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLR 240
Cdd:MTH00163 157 GIFYLYNNSGSLSFFLLN---FFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLR 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 241 LSSPFWWLSSTtLAPLFSALSLWGAVITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSS 320
Cdd:MTH00163 234 VMSFFSKLGLK-FNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSS 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 321 ALFAIANMTYETTNTRNMLLNKGLLSLFPSMSLWWFLLSAANMGAPPSINLLSEIILLTSIVTLTNLFMIPLVMCSFISG 400
Cdd:MTH00163 313 GLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSA 392
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2755227892 401 AYSLILYTTTQHGSPSKYMNTMKLFTPRNHLTISMHIFPLFLLIMKPDMVLSW 453
Cdd:MTH00163 393 AYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-450 |
1.92e-100 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 307.89 E-value: 1.92e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 1 MLKLLFYMALLPLITLYTPTYMIWTSLSALLIMSMVLLMIIFMPKISSLPLITPMLYLDSLSLALLLLTLWTSALMIIAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 81 FSILNTNKAP--KLFCINLTTLNLFLFLTFSTNNYLMFYIFFEASLIPTLIMILGWGYQPERLQAGMYLILYTVTASLPL 158
Cdd:MTH00124 81 QNHLQHEPLQrkRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 159 LMSISMIFNFNSTLYM-LSVLAPPTSFHTLT--MWWFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGG 235
Cdd:MTH00124 161 LIAILYLHNQTGTLSLpMLQLTHPTLTNSWTnlLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 236 YGLLRLSsPFWWLSSTTLAPLFSALSLWGAVITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAH 315
Cdd:MTH00124 241 YGIIRIT-LLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 316 GLCSSALFAIANMTYETTNTRNMLLNKGLLSLFPSMSLWWFLLSAANMGAPPSINLLSEIILLTSIVTLTNLFMIPLVMC 395
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 2755227892 396 SFISGAYSLILYTTTQHGSPSKYMNTMKLFTPRNHLTISMHIFPLFLLIMKPDMV 450
Cdd:MTH00124 400 TLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELI 454
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
77-451 |
4.66e-97 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 299.20 E-value: 4.66e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 77 IIASFSILNTN--KAPKLFCINLTTLNLFLFLTFSTNNYLMFYIFFEASLIPTLIMILGWGYQPERLQAGMYLILYTVTA 154
Cdd:MTH00044 78 LLASINHLSNNspNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFG 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 155 SLPLLMSISMIFNFNSTLYMLSV---LAPPTSFHTLTMWWFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILL 231
Cdd:MTH00044 158 SLPLLISLIAIYSSSSSLSIPLSelnWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILL 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 232 KLGGYGLLRLSSPFWWLSSTTLAPLFSALSLWGAVITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTM 311
Cdd:MTH00044 238 KLGGYGLIRLINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALIL 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 312 MIAHGLCSSALFAIANMTYETTNTRNMLLNKGLLSLFPSMSLWWFLLSAANMGAPPSINLLSEIILLTSIVTLTNLFMIP 391
Cdd:MTH00044 318 MIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPI 397
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 392 LVMCSFISGAYSLILYTTTQHGSPSKYMNTMKLFTPRNHLTISMHIFPLFLLIMKPDMVL 451
Cdd:MTH00044 398 IGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-450 |
6.92e-95 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 293.38 E-value: 6.92e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 3 KLLFYMALLPLITLYTPTYMIWTS--LSALLIMSMVLLMIIFMPKISSLPLITPMLYLDSLSLALLLLTLWTSALMIIAS 80
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSttFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 81 FSILNTNKAP-KLFCINLTTLNLFLFLTFSTNNYLMFYIFFEASLIPTLIMILGWGYQPERLQAGMYLILYTVTASLPLL 159
Cdd:MTH00206 81 NHMKNEPINRqRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 160 MSISMIFNFNSTLYMLSVLAPPTSFHTLTMWWFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLL 239
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 240 RLSsPFWWLSSTTLAPLFSALSLWGAVITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCS 319
Cdd:MTH00206 241 RII-LILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVS 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 320 SALFAIANMTYETTNTRNMLLNKGLLSLFPSMSLWWFLLSAANMGAPPSINLLSEIILLTSIVTLTNLFMIPLVMCSFIS 399
Cdd:MTH00206 320 SALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFT 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 2755227892 400 GAYSLILYTTTQHGSPSKYMNTMKLFTPRNHLTISMHIFPLFLLIMKPDMV 450
Cdd:MTH00206 400 AIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-454 |
1.09e-88 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 277.57 E-value: 1.09e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 1 MLKLLFYMALLPLITLYTPTYMIWTSLSALLIMSMVLLMIIFMPKISSLPLITPMLYLDSLSLALLLLTLWTSALMIIAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 81 FSILNTNKAP--KLFCINLTTLNLFLFLTFSTNNYLMFYIFFEASLIPTLIMILGWGYQPERLQAGMYLILYTVTASLPL 158
Cdd:MTH00068 81 QNHLKNEPINrqRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 159 LMSISMIFNFNSTLYMLSVLAPPTSFHTLTM---WWFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGG 235
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTnkiWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 236 YGLLRLSsPFWWLSSTTLAPLFSALSLWGAVITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAH 315
Cdd:MTH00068 241 YGILRIS-ILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 316 GLCSSALFAIANMTYETTNTRNMLLNKGLLSLFPSMSLWWFLLSAANMGAPPSINLLSEIILLTSIVTLTNLFMIPLVMC 395
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 2755227892 396 SFISGAYSLILYTTTQHGSPSKYMNTMKLFTPRNHLTISMHIFPLFLLIMKPDMVLSWL 454
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGMF 458
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-451 |
7.69e-84 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 265.22 E-value: 7.69e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 1 MLKLLFYMALLPLITLYTPTYMIWTSLSA--LLIMSMVLLMI--------IFMPKISSLPLITPMLYLDSLSLALllltl 70
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTysLLISLISLLLLnqpndnslNFSLLFFSDSLSTPLLILTTWLLPL----- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 71 wtsalMIIASFSILNTNKAP--KLFCINLTTLNLFLFLTFSTNNYLMFYIFFEASLIPTLIMILGWGYQPERLQAGMYLI 148
Cdd:MTH00110 76 -----MLMASQHHLSKEPLTrkKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 149 LYTVTASLPLLMSISMIFNFNSTLYMLsvLAPPTSFHTLTMW-----WFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGS 223
Cdd:MTH00110 151 FYTLVGSLPLLVALLYIQNNLGSLNFL--LLQLWAQPLPNSWsnnllWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGS 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 224 MVLAGILLKLGGYGLLRLSsPFWWLSSTTLAPLFSALSLWGAVITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSW 303
Cdd:MTH00110 229 MVLAAILLKLGGYGMMRIT-IILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPW 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 304 GWDASMTMMIAHGLCSSALFAIANMTYETTNTRNMLLNKGLLSLFPSMSLWWFLLSAANMGAPPSINLLSEIILLTSIVT 383
Cdd:MTH00110 308 SFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFS 387
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2755227892 384 LTNLFMIPLVMCSFISGAYSLILYTTTQHGSPSKYMNTMKLFTPRNHLTISMHIFPLFLLIMKPDMVL 451
Cdd:MTH00110 388 WSNITIILMGLNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIIL 455
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-453 |
1.59e-77 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 248.72 E-value: 1.59e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 1 MLKLLFYMALLPLITLYTPTYMIWTS-LSALLIMSMVLLMIIFMPKISSLPLITPMLYLDSLSLALLLLTLWTSALMIIA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTtLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 80 SFSILNTNKAPK--LFCINLTTLNLFLFLTFSTNNYLMFYIFFEASLIPTLIMILGWGYQPERLQAGMYLILYTVTASLP 157
Cdd:MTH00127 81 SQNHTAPEPINRqrMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 158 LLMSISMIFNFNSTLYMLSV-LAPPTSFHTLT--MWWFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLG 234
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLqYSQPLQLSSWAdkLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 235 GYGLLRLSSPFWWLSSTtLAPLFSALSLWGAVITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIA 314
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKE-LSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 315 HGLCSSALFAIANMTYETTNTRNMLLNKGLLSLFPSMSLWWFLLSAANMGAPPSINLLSEIILLTSIVTLTNLFMIPLVM 394
Cdd:MTH00127 320 HGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGL 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 2755227892 395 CSFISGAYSLILYTTTQHGSPSKYMNTMKLFTPRNHLTISMHIFPLFLLIMKPDMVLSW 453
Cdd:MTH00127 400 GTLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGW 458
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
111-396 |
3.10e-48 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 167.11 E-value: 3.10e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 111 NNYLMFYIFFEASLIPTLIMILGWGYQPERLQAGMYLILYTVTASLPLLMSISMIFNFNSTLY---MLSVLAPPTSFHTL 187
Cdd:pfam00361 2 NDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSfdeLSKALTGGLNSSGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 188 TMWWFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLRLSSPFWwLSSTTLAPLFSALSLWGAVI 267
Cdd:pfam00361 82 LLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYL-PSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 268 TATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIA-NMTYETTNTRNMLLNKGLLS 346
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2755227892 347 LFPSMSLWWFLLSAANMGAPPSINLLSEIILLTSIVTLTNLFMIPLVMCS 396
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
112-454 |
4.64e-45 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 163.71 E-value: 4.64e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 112 NYLMFYIFFEASLIPTLIMILGWGYqPERLQAGMYLILYTVTASLPLLMSISMIF--NFNSTLYMLSVLAPPTSFHTLTM 189
Cdd:COG1008 132 DLFLFYVFWELMLIPMYFLIGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYflAGALTFDIAELAAAPLPLTAQLL 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 190 WWFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLRLSSPFWWLSSTTLAPLFSALSLWGAVITA 269
Cdd:COG1008 211 LFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAALGVIGIIYGA 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 270 TICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIANMTYETTNTRNMLLNKGLLSLFP 349
Cdd:COG1008 291 LVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMP 370
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 350 SMSLWWFLLSAANMGAPPSINLLSEIILLTSIVTLTNLFMIPLVMCSFISGAYSLILYTTTQHGSPSKYMNTMKLFTPRN 429
Cdd:COG1008 371 VLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRE 450
|
330 340
....*....|....*....|....*
gi 2755227892 430 HLTISMHIFPLFLLIMKPDMVLSWL 454
Cdd:COG1008 451 LAVLAPLAALILLLGLYPQPLLDLI 475
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
109-451 |
1.02e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 162.54 E-value: 1.02e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 109 STNNYLMFYIFFEASLIPTLIMILGWGYQPERLQAGMYLILYTVTASLPLLMSISMIFNFNSTLYMLSVLAPPTSFHTlT 188
Cdd:MTH00204 130 SVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLSI-Q 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 189 MWWFMSI-MAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLRLSSPFWWLSSTTLAPLFSALSLWGAVI 267
Cdd:MTH00204 209 KWLLVGFfLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMLSVIAVIY 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 268 TATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIANMTYETTNTRNMLLNKGLLSL 347
Cdd:MTH00204 289 GSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLT 368
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 348 FPSMSLWWFLLSAANMGAPPSINLLSEIILLTSIVTlTNLFMIPLVMCS-FISGAYSLILYTTTQHGSPSKYMNTMKLFT 426
Cdd:MTH00204 369 MPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFE-YSLGLGVLVTSGmVWSAAYSLYLYNRISFGGGSNYLLFSRDLN 447
|
330 340
....*....|....*....|....*
gi 2755227892 427 PRNHLTISMHIFPLFLLIMKPDMVL 451
Cdd:MTH00204 448 RRELLAILPLIIAIFLLGIVPFIII 472
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
116-444 |
6.70e-42 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 154.82 E-value: 6.70e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 116 FYIFFEASLIPTLIMILGWGYQPERLQAGMYLILYTVTASLPLLMSISMIFNF-NSTLYMlsVLAPPTSFHTLTMWWFMS 194
Cdd:MTH00217 134 FYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYaGTTDYQ--ALCCLKIEKELQYFIFLG 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 195 I-MAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLRLSSPFWWLSSTTLAPLFSALSLWGAVITATICI 273
Cdd:MTH00217 212 FfLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSLTTC 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 274 RQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIANMTYETTNTRNMLLNKGLLSLFPSMSL 353
Cdd:MTH00217 292 RQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGI 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 354 WWFLLSAANMGAPPSINLLSEIILLTSIVTLTNLFMIPLVMCSFISGAYSLILYTTTQHGSPSKYMNTMKLFTPRNHLTi 433
Cdd:MTH00217 372 LMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGAPSKYLYFSRDLNRREFYV- 450
|
330
....*....|.
gi 2755227892 434 smhIFPLFLLI 444
Cdd:MTH00217 451 ---LLPLVFLI 458
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
112-407 |
1.20e-39 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 148.55 E-value: 1.20e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 112 NYLMFYIFFEASLIPTLIMILGWGyQPERLQAGMYLILYTVTASLPLLMS-ISMIFNFNSTLYMLSVLAPPTSFHTLTMW 190
Cdd:TIGR01972 127 DLFLFYVFWEAMLIPMYLLIGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAiLGLYFLGGGTFDLLELLNLPLPFGVQTWL 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 191 WFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLRLSSPFWWLSSTTLAPLFSALSLWGAVITAT 270
Cdd:TIGR01972 206 FLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGAL 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 271 ICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIANMTYETTNTRNMLLNKGLLSLFPS 350
Cdd:TIGR01972 286 IALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPV 365
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 2755227892 351 MSLWWFLLSAANMGAPPSINLLSEIILLTSIVTLTNLFMIPLVMCSFISGAYSLILY 407
Cdd:TIGR01972 366 LAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
112-407 |
1.40e-39 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 148.81 E-value: 1.40e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 112 NYLMFYIFFEASLIPTLIMILGWGYqPERLQAGMYLILYTVTASLPLLMSISMIFNFNS----TLYMLSVLAPPTSFHTL 187
Cdd:PRK05846 132 DLLLFYVFFEAMLIPMYFLIGVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVYYnatgTFDIADLLNLPLPPGVQ 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 188 TMWWFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLRLSSPFWWLSSTTLAPLFSALSLWGAVI 267
Cdd:PRK05846 211 YWLFLAFFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIY 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 268 TATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIANMTYETTNTRNMLLNKGLLSL 347
Cdd:PRK05846 291 GALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKV 370
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 348 FPSMSLWWFLLSAANMGAPPSINLLSEIILLTSIVTLTNLFMIPLVMCSFISGAYSLILY 407
Cdd:PRK05846 371 MPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLY 430
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
91-451 |
3.32e-37 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 142.37 E-value: 3.32e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 91 KLFCINLTTLNLFLFLTFSTNNYLMFYIFFEASLIPTLIMILGWGYQPERLQAGMYLILYTVTASLPLLMSISMIFNFNS 170
Cdd:MTH00226 131 KSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHG 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 171 TL-YMLSVLAPPTSFHTLTMWWFMSI-MAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLRLSSPFWWL 248
Cdd:MTH00226 211 TTdYLTLASCSHVVSEQTQKWIFLGIfLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPL 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 249 SSTTLAPLFSALSLWGAVITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIANM 328
Cdd:MTH00226 291 GAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTI 370
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 329 TYETTNTRNMLLNKGLLSLFPSMSLWWFLLSAANMGAPPSINLLSEIILLTSIVTLTNLFMIPLVMCSFISGAYSLILYT 408
Cdd:MTH00226 371 LYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFAN 450
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 2755227892 409 TTQHGSPSKYMNTMKLFTPRNHLTISMHIFPLFLLIMKPDMVL 451
Cdd:MTH00226 451 RVTFGAPGNLITFARDVNRREFYITASMVFFAFLIGIYPIFIL 493
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
110-444 |
2.26e-32 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 126.95 E-value: 2.26e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 110 TNNYLMFYIFFEASLIPTLIMILGWGYQPERLQAGMYLILYTVTASLPLLMSISMIFNFNSTLYMLSVLApptsfhtlTM 189
Cdd:MTH00094 81 SSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLS--------WE 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 190 WWFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLRLSSPFWWLSSTtlapLFSALSLWGAVITA 269
Cdd:MTH00094 153 MFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFVYNN----FWIIFSLLGMILSS 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 270 TICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIANMTYETTNTRNMLLNKGLLSLFP 349
Cdd:MTH00094 229 FCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSM 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 350 SMSLWWFLLSAANMGAPPSINLLSEIILLTSIVTLTNLFMIPLVMCSFISGAYSLILYTTTQHGSPSKYMNTMKLFTPRN 429
Cdd:MTH00094 309 FFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLSLP 388
|
330
....*....|....*
gi 2755227892 430 HLTISMHIFPLFLLI 444
Cdd:MTH00094 389 LVFMMFNMFWLSLFY 403
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
110-411 |
5.97e-25 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 106.38 E-value: 5.97e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 110 TNNYLMFYIFFEASLIPTLIMILGWGYqPERLQAGMYLILYTVTASLPLLMSISMIFNFNSTLYM--LSVLAPPTSFHTL 187
Cdd:COG0651 126 TGDLFNLFVFFEVMLLASYGLVALGGT-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMadLAARLAELDPGLL 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 188 TMWWFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLRLsspFWWLSSTTLAPLFSALSLWGAVI 267
Cdd:COG0651 205 LAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRV---LTLLFGADPALFLGTLLLVLGLL 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 268 TATIC----IRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIANMTYETTNTRNMLLNKG 343
Cdd:COG0651 282 TMLVGalgaLAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGG 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2755227892 344 LLSLFPSMSLWWFLLSAANMGAPPSINLLSEIILLTSIVTLTN-LFMIPLVMCSFISGAYSLILYTTTQ 411
Cdd:COG0651 362 LGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAwLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
78-338 |
1.07e-22 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 100.49 E-value: 1.07e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 78 IASFSILNTNKAPKLFCINLTTLNLFLFLTFSTNNYLMFYIFFEASLIPTLIMILGWGYQpERLQAGMYLILYTVTASLP 157
Cdd:PRK12561 74 LSIFASWKVTRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASIF 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 158 LLMS-ISMIFNFNSTLYMLSVLA---PPTSFHTLTMWWFMsiMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKL 233
Cdd:PRK12561 153 ILVAgLALALSGDTFTFDLAELGaksYPLALELLLYAGFL--IAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKM 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 234 GGYGLLRLSSPFWWLSSTTLAPLFSALSLWGAVITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMI 313
Cdd:PRK12561 231 GGYALIRFNVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMI 310
|
250 260
....*....|....*....|....*
gi 2755227892 314 AHGLCSSALFAIANMTYETTNTRNM 338
Cdd:PRK12561 311 SHGLIAAALFFLTGVTYERTHTLSI 335
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
77-413 |
9.54e-20 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 91.70 E-value: 9.54e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 77 IIASFSILNTNKAPKLFCINLTTLNLFLFLTFSTNNYLMFYIFFEASLIPTLIMILGWGYQpERLQAGMYLILYT-VTAS 155
Cdd:PRK07363 93 WIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTaVSGL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 156 LPLLMSISMIFNFNSTLYMLSVLAPPT-SFHTLTMWWFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSM----VLAGIL 230
Cdd:PRK07363 172 LVLAAFLGIVWLSGSTSFDYDAISTQNlSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAIllggVLAKLG 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 231 LKLGGYGLLRLSSPFWWLSSTTLAPLFSALSLWGAVITaticIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMT 310
Cdd:PRK07363 252 TYGLLRFGLQLFPQTWSLVAPGLAIIGTISVIYGALSA----IAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVA 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 311 MMIAHGLCSSALFAIANMTYETTNTRNMLLNKGLLSLFPSMSLWWFLLSAANM---GAPPSINLLSEIILLTSIVTltnL 387
Cdd:PRK07363 328 QMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLVLAGMasaGIPGLVGFVAEFIVFQGSFS---T 404
|
330 340
....*....|....*....|....*....
gi 2755227892 388 FMIPLVMCSFISG---AYSLILYTTTQHG 413
Cdd:PRK07363 405 FPIPTLLCIVASGltaVYFVILLNRTCFG 433
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
90-383 |
2.54e-19 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 90.54 E-value: 2.54e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 90 PKLFCINLTTLNLFLFLTFSTNNYLMFYIFFEASLIPTLIMILGWGYQpERLQAGMYLILYTVTASL-PLLMSISMIFNF 168
Cdd:PRK02546 114 PKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLfILLAALAMAFYG 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 169 NSTLYMLSVLAP---PTSFHTLTMWWFMsiMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLRLSSPF 245
Cdd:PRK02546 193 DTPTFDMTALAAkdfGLGFQLLCYAGLL--IAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGM 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 246 WWLSSTTLAPLFSALSLWGAVITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAI 325
Cdd:PRK02546 271 LPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFL 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 2755227892 326 ANMTYETTNTRNMLLNKGLLSLFPSMSLWWFLLSAANMGAPPSINLLSEIILLTSIVT 383
Cdd:PRK02546 351 VGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFAT 408
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
110-345 |
1.02e-17 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 85.52 E-value: 1.02e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 110 TNNYLMFYIFFEASLIPTLIMILGWGYQpERLQAGMYLILYTVTASLPLLMS-ISMIFNFNSTLYMLSVLAPPT-SFHTL 187
Cdd:PRK06473 126 AQDLLLFFLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSfLGLVWLSGASSFDYEPLRSHTlPLSTQ 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 188 TMWWFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLRLSSPFWWLSSTTLAPLFSALSLWGAVI 267
Cdd:PRK06473 205 LLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLY 284
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2755227892 268 TATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIANMTYETTNTRNMLLNKGLL 345
Cdd:PRK06473 285 GASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLL 362
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
109-398 |
1.57e-14 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 75.37 E-value: 1.57e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 109 STNNYLMFYIFFEASLIPTLIMILGWGYQpERLQAGMYLILYTVTASLPLLMSISMI--FNFNSTLYMLSVLAPPTSFHT 186
Cdd:CHL00011 130 SSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMglYGSNEPTLNFETLANQSYPVA 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 187 LTMWWFMS-IMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLRLSSPFWWLSSTTLAPLFSALSLWGA 265
Cdd:CHL00011 209 LEILFYIGfLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQI 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 266 VITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIANMTYETTNTRNMLLNKGLL 345
Cdd:CHL00011 289 IYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIA 368
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 2755227892 346 SLFPSMSLWWFLLSAANMGAPPSINLLSEIILLTSIVTLTNLFMIPLVMCSFI 398
Cdd:CHL00011 369 IPMPKIFTMFSSFSMASLALPGMSGFVAELIVFFGIITSQKYLLMPKILITFV 421
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
110-382 |
4.32e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 71.06 E-value: 4.32e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 110 TNNYLMFYIFFEASLIPTLIMIlGWGYQPERLQAG-MYLILYTVTASLpLLMSISMIFNFNSTLYM--LSVLAPPTsfHT 186
Cdd:PRK08375 125 TADLFNLFVFLEIMSLSSYALV-AMGGDRRALAAArKYLIVGLIGSTF-LLIGVGLLYGVTGTLNMadLAGALAEN--PT 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 187 LTMWWFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLRLSS---PFWWLSSTTLAPLFSALSLW 263
Cdd:PRK08375 201 VVTAFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFtvfGGDFRFALGLGWLLAVLALL 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 264 GAVITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIANMTYETTNTRNMLLNKG 343
Cdd:PRK08375 281 SMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSG 360
|
250 260 270
....*....|....*....|....*....|....*....
gi 2755227892 344 LLSLFPSMSLWWFLLSAANMGAPPSINLLSEIILLTSIV 382
Cdd:PRK08375 361 LGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAV 399
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
193-407 |
2.67e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 68.46 E-value: 2.67e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 193 MSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVL----------AGILLKLGGYGLLRLSSPFWwlssTTLAPLFSALSL 262
Cdd:PRK12667 228 LALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLsglvvnvgayAIIRFLYTIFGISPSLIDFR----AALSPILIILGA 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 263 WGAVITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIANMTYETTNTRNMLLNK 342
Cdd:PRK12667 304 VSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELA 383
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2755227892 343 GLLSLFPSMSLWWFLLSAANMGAPPSINLLSEIILLTSivtLTNLFMIPLVMCSFISGAYSLILY 407
Cdd:PRK12667 384 GLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNA---LLESGFYLPALVLLIASAISLVGY 445
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
208-381 |
6.97e-10 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 61.10 E-value: 6.97e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 208 HLWLPKAHVEAPVAGSMVL-------AGILLKLGGYGLLRLsspfwwLSSTTLAPLFSALSLWGAVITATICIRQPDLKS 280
Cdd:PRK06458 234 HAWLPDAHSEAPSPVSALLsgvllnvALYAVLRYYILIDAA------IGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKR 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 281 LIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIANMTYETTNTRNMLLNKGLLSLFPSMSLWWFLLSA 360
Cdd:PRK06458 308 LFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGAL 387
|
170 180
....*....|....*....|.
gi 2755227892 361 ANMGAPPSINLLSEIILLTSI 381
Cdd:PRK06458 388 AIAGMPPFGVFISEFLILTAG 408
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
111-336 |
1.17e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 60.40 E-value: 1.17e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 111 NNYLMFYIFFEASLIPTLIMILgWGYQPERLQAGMYLILYTVTASLpLLMSISMIFNFNSTLYMLSV---LAPPTSFHTL 187
Cdd:PRK08668 118 NDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVLSAIGAYA-MLYAIFLIYAKTGTFDFADIsqgLINDTSTGFA 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 188 TMWWFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVL------AGILLKLGGYGLLRLSSPFWWLSSTTLAPLFSALS 261
Cdd:PRK08668 196 LIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLsgqlskLGAYGFLLVLYVLPGTKLFSEFGTYRGVPLFNYIL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 262 LWGAVITATI----CIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALF-AIANMTYETTNTR 336
Cdd:PRK08668 276 AWLGNISIIVgtlmAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFlIFAAVIYRTGTTK 355
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
111-407 |
1.85e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 59.55 E-value: 1.85e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 111 NNYLMFYIFFEASLIPTLIMILGWGYQPERLQAGMYLILYTVTASLPLLMSISMIFNFNSTLYMLSvlAPPTSFHTLTMW 190
Cdd:MTH00062 91 NNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSD--WGSDDSVSLIVY 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 191 WFMSIMaFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLRLSSPFWWLSSTTLAPLFSALSLwGAVITAt 270
Cdd:MTH00062 169 YVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFSV-FFLITA- 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 271 icIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIANMTYETTNTRNMLLNKGLLSLFPS 350
Cdd:MTH00062 246 --CSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLV 323
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 2755227892 351 MSLWWFLLSAANMGAPPSINLLSEIILLTSIVTLTnLFMIPLVMCSFISGAYSLILY 407
Cdd:MTH00062 324 LRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVL-VYLLFWCFYLFFGGLVPLILL 379
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
112-380 |
7.62e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 54.74 E-value: 7.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 112 NYLMFYIFFEASLIPTLIMILGWGYQPERLQAGM-YLILYTVTASLPLLMSISMIFNFNSTLYMLSVLAPPTsfhtLTMW 190
Cdd:PRK08667 132 NTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIfYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGI----LSLV 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 191 WFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGS-----MVLAGILLKLGGYGLLRLSSPFWWLSSTTLAPLFSALSlwgA 265
Cdd:PRK08667 208 FLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSalmsgVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALL---G 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 266 VITAticIRQPDLKSLIAYSSIGHMGLITAG---FMTGSSWGWDASMTMMIA--------HGLCSSALFAIANMTYETTN 334
Cdd:PRK08667 285 VIYA---LKEHDLKGLLAYSSIENIGIILMGiglYVIFGVYGLDTLALLALGgalfhslnHALFKSLLFLTAGSVVHATG 361
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 2755227892 335 TRNMLLNKGLLSLFPSMSLWWFLLSAANMGAPPSINLLSEIILLTS 380
Cdd:PRK08667 362 TRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYES 407
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
116-445 |
1.86e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 53.18 E-value: 1.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 116 FYIFFEASLIPTLIMILGWGYQPERLQAGMYLILYTVTASLPLLMSISMIFNFNSTLYM----LSVLAPPTSFHTLTMWW 191
Cdd:PRK08376 146 FFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMaylaVKMSENPTVVAKIALAL 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 192 FMSIMAFmvKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLRLSSPFW-WLSSTTLAPLFSALSLWGAVITAT 270
Cdd:PRK08376 226 FIAGLAM--KSGAVPVHMWLPDAYPAAPSSISAMLLVIKQAGLYALARVLFSIYGpAINLATVGWVIIILGCLTMFVGVA 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 271 ICIRQPDLKSLIAYSSIGHMGLITAGFMTG---------SSWGWDA---SMTMMIAHGLCSSALFAIANMTYETTNTRNM 338
Cdd:PRK08376 304 MAVVQKDVKRLLAYHSVSQIGYMLLGLGVGlaalgdpamASYGEIAlagGIYHIVNHALYKALLFLTAGAVIYETGTRNL 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 339 LLNKGLLSLFPSMSLWWFLLSAANMGAPPSINLLSEIILLTSIVTLTNLF-MIPLVMCSFISGAYSLILYTTTQHGSPSK 417
Cdd:PRK08376 384 NELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILgVIAMIGSVLTLASFVKVFHTAFFGPPSEK 463
|
330 340
....*....|....*....|....*...
gi 2755227892 418 YMNTMKLFTPrnhLTISMHIFPLFLLIM 445
Cdd:PRK08376 464 VMNVKEPPKP---MLVPMLILAIAIIGM 488
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
253-415 |
1.94e-07 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 53.23 E-value: 1.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 253 LAPLFSALSLWGAVIT----------ATICIRQPDLKSLIAYSSIGHMGLITAGFMTGsswGWDASMTMMIAHGLCSSAL 322
Cdd:COG1009 264 LSPLFALSPVWLTVVAiigaitalfaALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALL 340
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 323 FAIANMTYETTNTRNMLLNKGLLSLFPsMSLWWFLLSAANM-GAPPSINLLS-EIILLTSIVTLTNLFMIPLVMC--SFI 398
Cdd:COG1009 341 FLGAGSVIHATGTRDIRKMGGLRKKMP-ITAITFLIGALSLaGIPPFAGFFSkEAILEAALEAGGLGPLLLAVALlgAFL 419
|
170
....*....|....*..
gi 2755227892 399 SGAYSLILYTTTQHGSP 415
Cdd:COG1009 420 TAFYSFRLFFLVFFGKP 436
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-398 |
4.55e-07 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 52.45 E-value: 4.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 110 TNNYLMFYIFFEASLIPTLIMILGWGYQPERLQAGMYLILYTVTASLPLLMSISMIFNFNSTLYMLSVLAPPTSFHTLTM 189
Cdd:PRK12646 129 SDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHGL 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 190 WWFMSIMAFM---VKMPLYTTHLWLPKAhVEAPVAGSMVLAGILLKLGGYGLLRLSSPFWWLSSTTLApLFSALSLWGAV 266
Cdd:PRK12646 209 FIPMIFMFLLgafTKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIY-IVTFVGLITML 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 267 ITATICIRQPDLKSLIAYSSIGHMGLITA-----GFMTGSSWGWDASMTMMIA---------HGLCSSALFAIANMTYET 332
Cdd:PRK12646 287 FGSITALKQWDLKGILAYSTISQLGMIMAmvgigGGYAQHQQDAIASIYVFVLfaalfhlmnHAIFKCALFMGVGIIDHE 366
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2755227892 333 TNTRNMLLNKGLLSLFPSMSLwWFLLSAANMGAPPSIN-LLSEIILLTSIVTLTNLFMIPLVMCSFI 398
Cdd:PRK12646 367 AGTRDIRILSGMRQLFPKMNL-VMTIAALSMAGVPFLNgFLSKEMFLDALTQTGQLSQFSLISMIII 432
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
195-394 |
1.17e-06 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 50.92 E-value: 1.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 195 IMAFMVKMPLYTTHLWLPKAHVEAP----VAGSMVLAGILLKLGGYGLLRLSSPFWWLSSTTLAPLFSALSLWGAVITAt 270
Cdd:PRK08377 213 IFGLAVEAELFPLNAWAPDAYQAAPhpitVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLVIIMATLTVFFAELSA- 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 271 icIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIANMTYETTNTRNMLLNKGLLSLFPS 350
Cdd:PRK08377 292 --LRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPL 369
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 2755227892 351 MSLWWFLLSAANMGAPPSINLLSEIILLTSIVTLTNLFMIPLVM 394
Cdd:PRK08377 370 TALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVL 413
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-367 |
1.20e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 51.08 E-value: 1.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 110 TNNYLMFYIFFEaslIPTLIMILGWGYQPERL---QAGMYLILYTVTASLPLLMSISMIFNFNSTLYMLSVLA-PPTSfh 185
Cdd:PRK12644 125 SDNLLLLYVFWE---LTTVLSFLLIGHYAERAasrRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLAdPPTG-- 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 186 tltmwWFMSIMAFMV------KMPLYTTHLWLPKAhVEAPV-------AGSMVLAGILLKLGgygllrlsspfwwlsstt 252
Cdd:PRK12644 200 -----PAVSVAVVLIlvgalsKSAIVPFHFWLPGA-MAAPTpvsaylhAAAMVKAGIYLVAR------------------ 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 253 LAPLFSALSLWGAVI----TATI------CIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSAL 322
Cdd:PRK12644 256 LAPGFADVPVWRPTVlvlgLATMllggwrALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAAL 335
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 2755227892 323 FAIANMTYETTNTRNMLLNKGLLSLFPSMsLWWFLLSAANM-GAPP 367
Cdd:PRK12644 336 FLVVGIIDHSTGTRDIRKLSGLGRRQPVL-AVVAALAAASMaGLPP 380
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
265-379 |
2.06e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 50.43 E-value: 2.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 265 AVITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIANMTYETTNTRNMllnKGL 344
Cdd:PRK12650 283 ALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDI---RRL 359
|
90 100 110
....*....|....*....|....*....|....*...
gi 2755227892 345 LSLFPSM--SLWWFLLSAANMGA-PPSINLLSEIILLT 379
Cdd:PRK12650 360 GSLWRRMpfTFVSVTIAALSMAAvPPLFGFVSKEGMLT 397
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
265-445 |
2.75e-06 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 49.59 E-value: 2.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 265 AVITATICI----RQPDLKSLIAYSSIGHMGLITAGFMT---GSSWGWDASMTMMIAHGLCSSALFAIANMTYETTNTRN 337
Cdd:PRK06525 279 AIVTLLYGFlmylPQQDMKRLLAYSTITQLGYMFFGLSLailGSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRL 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 338 MLLNKGLLSLFPSMSLWWFLLSAANMGAPP------SINLLSEIILLTSIVTLTNLFMIPLVMCSFISGAYSLILYTTTQ 411
Cdd:PRK06525 359 LPRLRGVLKKLPLVGVGFCVAALAITGVPPfngffsKFPIFAAGFELSVEYWILLPAMVLLLIESVASFAWFLRWFGRVV 438
|
170 180 190
....*....|....*....|....*....|....
gi 2755227892 412 HGSPSKYMNTMKlftprnHLTISMHIFPLFLLIM 445
Cdd:PRK06525 439 FGEPSEAVADAA------PLPGSMKLVLIVLIVM 466
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
175-397 |
2.79e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 49.37 E-value: 2.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 175 LSVLAPPTSFHTLTMWWFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLRLSSpfwWLSSTTLA 254
Cdd:PRK08676 193 LAAHASLLSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSA---LLRQSGAA 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 255 PLFSALSLWGAVITATIC----IRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIANMTY 330
Cdd:PRK08676 270 EQFSNVLIGLGIFSIAVAafsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILH 349
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2755227892 331 ETTNtRNMLLNKGLLSLFPSMSLWWFLL-SAANMGAPPSINLLSEIILLTSI------VTLTNLFMIPLVMCSF 397
Cdd:PRK08676 350 RQYR-SDRFDRIFDVFRLQPVAAWGVILgSAAIIGMPPFPLFLSKFFILLQLggisvwLVLAVLLLLLLAASSF 422
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
110-382 |
5.60e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 48.58 E-value: 5.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 110 TNNYLMFYIFFEASLIPTLIMILGWGYQPERLQAGMYLILYTVTASLPLLmSISMIFNFNSTLY---MLSVLAPPTSFHT 186
Cdd:PRK12662 129 SNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLI-GIGFLYAITGTLNmgdMFLIIQDLPTNRA 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 187 LTMWWFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLRLSSPFWWLSSTTLAPLFS----ALSL 262
Cdd:PRK12662 208 IQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFTTLPFNnvfmILAA 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 263 WGAVITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIANMTYETTNTRNMLLNK 342
Cdd:PRK12662 288 LAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCL 367
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 2755227892 343 GLLSLFPSMSLWWFLLSAANMGAPPSINLLSEIILLTSIV 382
Cdd:PRK12662 368 NLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFI 407
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
112-326 |
1.30e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 47.25 E-value: 1.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 112 NYLMFYIFFEASLIPTLIMIlGWGYQPERLQAGMYLILYTVTASLPLLMSISMIFNFNSTLYMLSV-LAPPTSFHTLtmw 190
Cdd:PRK07234 115 DLISLYVALEVLSIATFLLV-AYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLaTADPEAFALI--- 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 191 wfmsIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLRLSspfwwLSSTTLAPLFSALSLWGAVITAT 270
Cdd:PRK07234 191 ----ALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA-----LDVPGLDLIVRIFGVGTALLGVL 261
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 2755227892 271 ICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGwdasmtmmIAHGLCSSALFAIA 326
Cdd:PRK07234 262 FALLEKDLKRMLAFSTISQLGFILAAPLVGGLYA--------LAHGLVKSTLFLCA 309
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
109-328 |
4.25e-05 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 45.88 E-value: 4.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 109 STNNYLMFYIFFEASLIPTLIMILGWGYQPERLQAGMYLILYTVTASLPLLMSISMIFNFNSTLYmLSVLAPPTSFHTLT 188
Cdd:COG1007 120 SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLN-LAGIAAALAAGGAN 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 189 MWWFMSIMAFMV-----KMPLYTTHLWLPKAHVEAPV-------AGSMVLAGILLKLGGYGLLRLSSPFWwlssttlAPL 256
Cdd:COG1007 199 SPLLLLGLVLVLaglafKLSAVPFHMWTPDVYEGAPTpvtaflaTAPKIAAFAALLRLLVEAFPGLAADW-------QLL 271
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2755227892 257 FSALSLWGAVITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIANM 328
Cdd:COG1007 272 LAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFAVILL 343
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
250-328 |
5.26e-05 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 45.58 E-value: 5.26e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2755227892 250 STTLAPLFSALSLWGAVITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIANM 328
Cdd:PRK05777 266 SEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAFGVISL 344
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
109-404 |
1.01e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 44.25 E-value: 1.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 109 STNNYLMFYIFFEASLIPTLIMILGWGYQPERLQAGM-YLILYTVTASLPLL-----------MSISMI-FNFNSTLYML 175
Cdd:MTH00196 11 SSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLkYFVLGALSSGLFLFgcallcgttggLHLSYInLVLNSGQSFS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 176 SVLAPPTSFhtltmwwfMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLRLSSPFwwlssttlaP 255
Cdd:MTH00196 91 SVSVPIGYL--------LIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNV---------N 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 256 LFSALSLWGAVITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIAnMTYETtnT 335
Cdd:MTH00196 154 ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSII-LALNV--Y 230
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2755227892 336 RNMLLN-KGLLSLFPSMSLWWFLLSAANMGAPPSINLLSE-IILLTSIVTLTNLFMIPLVMCSFISGAYSL 404
Cdd:MTH00196 231 KNLIIEfSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKwLILLSGVVYQYYLIFLLAVFCSVIAGVYYV 301
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
245-349 |
1.23e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 44.41 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 245 FWWLSSTTLAPLfsalsLWGAVITaticIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFA 324
Cdd:PRK12648 271 FWIVGGAGLITL-----LLGAYFA----LFQHDLKGLLAYSTISHLGLITLLLGLGSPLAAVAAIFHIINHATFKASLFM 341
|
90 100
....*....|....*....|....*
gi 2755227892 325 IANMTYETTNTRNMLLNKGLLSLFP 349
Cdd:PRK12648 342 AAGIIDHETGTRDMRRLSGLRRLMP 366
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
259-367 |
4.71e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 42.33 E-value: 4.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 259 ALSLWGAVITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIANMTYETTNTRNM 338
Cdd:PRK06277 271 ALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNL 350
|
90 100
....*....|....*....|....*....
gi 2755227892 339 LLNKGLLSLFPSMSLWWFLLSAANMGAPP 367
Cdd:PRK06277 351 RKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
252-400 |
9.52e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 41.83 E-value: 9.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 252 TLAPLFSALSLwgaVITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIANMTYE 331
Cdd:PRK12647 260 TILPLFGGLTM---LTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDH 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 332 TTNTRNMLLNKGLLSLFPSMSLWWFLLSAANMGAPPSINLLSE-------------IILLTSIVTLTNLFMiplVMCSFI 398
Cdd:PRK12647 337 ETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKeliyealleaplwSLILTVAAVLGNALM---VAVAFL 413
|
..
gi 2755227892 399 SG 400
Cdd:PRK12647 414 VG 415
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
111-378 |
1.82e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 40.72 E-value: 1.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 111 NNYLMFYIFFEASLIptlimILGWGYQPERLQAGMYLILYTVTASLPLLMSISMIFNFNSTLYM--LSVLAPPTSFHTLT 188
Cdd:PRK12665 135 NLYVGFEILLVASYV-----LLTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMadLAVRLDELPSGTRT 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 189 MWWFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLRlsspfwwlSSTTLAP--LFSALSLWGAV 266
Cdd:PRK12665 210 ALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIR--------THTLLFPggGLDTLLMVVAL 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 267 ITATI----CIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIANMTYETTNTRNMLLNK 342
Cdd:PRK12665 282 LTMVVgilgAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLG 361
|
250 260 270
....*....|....*....|....*....|....*..
gi 2755227892 343 GLLSLFPSMSLwWFLLSAANM-GAPPSINLLSEIILL 378
Cdd:PRK12665 362 GLAKASPLLAV-LFFVPALNLgGIPPFSGFIGKVALL 397
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
275-402 |
4.95e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 39.23 E-value: 4.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 275 QPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAIanmTYETTNTRNMLLN-KGLLSLFPSMSL 353
Cdd:MTH00199 268 QTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYMIIYVIMSICSFSI---ILSLKLTKGLIVEvSGLSRKNPVIAL 344
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 2755227892 354 WWFLLSAANMGAPPSINLLSE-IILLTSIVTLTNLFMIPLVMCSFISGAY 402
Cdd:MTH00199 345 TLALTFLSIAGIPPLAGFLSKwLILLSGVSSGYYLICIIAVLSSVIAGVY 394
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
109-325 |
5.70e-03 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 39.16 E-value: 5.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 109 STNNYLMFYIFFEASLIPTLIMILGWGYQPERLQAGM-YLILYTVTASLpLLMSISMIFNFNSTLY----MLSVLAPPTS 183
Cdd:TIGR01770 120 SSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLkYFILGAFSSGL-LLFGISLIYGFTGSLNfedlLLFLSNGMLN 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2755227892 184 FHTLTMWWFMSIMAFMVKMPLYTTHLWLPKAHVEAPVAGSMVLAGILLKLGGYGLLRLSSPFWWLSSTTLAPLFSALSLW 263
Cdd:TIGR01770 199 ISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILFGFSEAWQIFLAIIAFL 278
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2755227892 264 GAVITATICIRQPDLKSLIAYSSIGHMGLITAGFMTGSSWGWDASMTMMIAHGLCSSALFAI 325
Cdd:TIGR01770 279 SMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFGV 340
|
|
| |
