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Conserved domains on  [gi|254584899|ref|XP_002498017|]
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uncharacterized protein ZYRO0G00132g [Zygosaccharomyces rouxii]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUP super family cl02924
DUP family; This family consists of several yeast proteins of unknown functions. Swiss-prot ...
 99-180 4.46e-04

DUP family; This family consists of several yeast proteins of unknown functions. Swiss-prot annotates these as belonging to the DUP family. Several members of this family contain an internal duplication of this region.


The actual alignment was detected with superfamily member pfam00674:

Pssm-ID: 395546  Cd Length: 96  Bit Score: 38.81  E-value: 4.46e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254584899   99 FLCFTF-SFWNFIDNRKKVNIEKKVLQqLLKEVAEMDLPGDPVAWQRIASRVNHFSEETGYRYS--LFYSGEHCMRFFVR 175
Cdd:pfam00674   8 ILLLICiVFPNIRMFGSSVSDEHFKMQ-LLSEIITRKPAVDGKEWDTIAYNMNQYLFENKLWKTpyYFYDGIDCQEFFRR 86


                  ....*
gi 254584899  176 EIVKP 180
Cdd:pfam00674  87 LILGP 91
 
Name Accession Description Interval E-value
DUP pfam00674
DUP family; This family consists of several yeast proteins of unknown functions. Swiss-prot ...
 99-180 4.46e-04

DUP family; This family consists of several yeast proteins of unknown functions. Swiss-prot annotates these as belonging to the DUP family. Several members of this family contain an internal duplication of this region.


Pssm-ID: 395546  Cd Length: 96  Bit Score: 38.81  E-value: 4.46e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254584899   99 FLCFTF-SFWNFIDNRKKVNIEKKVLQqLLKEVAEMDLPGDPVAWQRIASRVNHFSEETGYRYS--LFYSGEHCMRFFVR 175
Cdd:pfam00674   8 ILLLICiVFPNIRMFGSSVSDEHFKMQ-LLSEIITRKPAVDGKEWDTIAYNMNQYLFENKLWKTpyYFYDGIDCQEFFRR 86


                  ....*
gi 254584899  176 EIVKP 180
Cdd:pfam00674  87 LILGP 91
 
Name Accession Description Interval E-value
DUP pfam00674
DUP family; This family consists of several yeast proteins of unknown functions. Swiss-prot ...
 99-180 4.46e-04

DUP family; This family consists of several yeast proteins of unknown functions. Swiss-prot annotates these as belonging to the DUP family. Several members of this family contain an internal duplication of this region.


Pssm-ID: 395546  Cd Length: 96  Bit Score: 38.81  E-value: 4.46e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254584899   99 FLCFTF-SFWNFIDNRKKVNIEKKVLQqLLKEVAEMDLPGDPVAWQRIASRVNHFSEETGYRYS--LFYSGEHCMRFFVR 175
Cdd:pfam00674   8 ILLLICiVFPNIRMFGSSVSDEHFKMQ-LLSEIITRKPAVDGKEWDTIAYNMNQYLFENKLWKTpyYFYDGIDCQEFFRR 86


                  ....*
gi 254584899  176 EIVKP 180
Cdd:pfam00674  87 LILGP 91
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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