![](files/infoQ.gif)
myb/SANT-like DNA-binding domain-containing protein 2 isoform X1 [Mus musculus]
myb/SANT-like DNA-binding domain-containing protein( domain architecture ID 10619758)
nyb/SANT (SWI3, ADA2, N-CoR and TFIIIB)-like DNA-binding domain-containing protein may bind DNA and function as a transcription factor
List of domain hits
![](files/help.png)
Name | Accession | Description | Interval | E-value | ||
Myb_DNA-bind_4 | pfam13837 | Myb/SANT-like DNA-binding domain; This presumed domain appears to be related to other Myb ... |
192-260 | 2.38e-13 | ||
Myb/SANT-like DNA-binding domain; This presumed domain appears to be related to other Myb/SANT-like DNA binding domains. In particular pfam10545 seems most related. This family is greatly expanded in plants and appears in several proteins annotated as transposon proteins. : Pssm-ID: 463994 Cd Length: 84 Bit Score: 65.75 E-value: 2.38e-13
|
||||||
Name | Accession | Description | Interval | E-value | ||
Myb_DNA-bind_4 | pfam13837 | Myb/SANT-like DNA-binding domain; This presumed domain appears to be related to other Myb ... |
192-260 | 2.38e-13 | ||
Myb/SANT-like DNA-binding domain; This presumed domain appears to be related to other Myb/SANT-like DNA binding domains. In particular pfam10545 seems most related. This family is greatly expanded in plants and appears in several proteins annotated as transposon proteins. Pssm-ID: 463994 Cd Length: 84 Bit Score: 65.75 E-value: 2.38e-13
|
||||||
GT1 | cd12203 | GT1, myb-like, SANT family; GT-1, a myb-like protein, is one of the GT trihelix transcription ... |
192-256 | 4.97e-05 | ||
GT1, myb-like, SANT family; GT-1, a myb-like protein, is one of the GT trihelix transcription factors. GT-1 binds the GT cis-element of rbcS-3A, a light-induced gene, as a dimer. Arabidopsis GT-1 is a trans-activator and acts in the stabilization of components of the transcription pre-initiation complex comprised of TFIIA-TBP-TATA. The isolated GT-1 DNA-binding domain is sufficient to bind DNA. This region closely resembles the myb domain, but with longer helices. It has been proposed that GT-1 may respond to light signals via calcium-dependent phosphorylation to create a light-modulated molecular switch. These proteins are members of the SANT/myb group. SANT is named after 'SWI3, ADA2, N-CoR and TFIIIB', several factors that share this domain. The SANT domain resembles the 3 alpha-helix bundle of the DNA-binding Myb domains and is found in a diverse set of proteins. Pssm-ID: 213402 Cd Length: 66 Bit Score: 41.50 E-value: 4.97e-05
|
||||||
Name | Accession | Description | Interval | E-value | ||
Myb_DNA-bind_4 | pfam13837 | Myb/SANT-like DNA-binding domain; This presumed domain appears to be related to other Myb ... |
192-260 | 2.38e-13 | ||
Myb/SANT-like DNA-binding domain; This presumed domain appears to be related to other Myb/SANT-like DNA binding domains. In particular pfam10545 seems most related. This family is greatly expanded in plants and appears in several proteins annotated as transposon proteins. Pssm-ID: 463994 Cd Length: 84 Bit Score: 65.75 E-value: 2.38e-13
|
||||||
GT1 | cd12203 | GT1, myb-like, SANT family; GT-1, a myb-like protein, is one of the GT trihelix transcription ... |
192-256 | 4.97e-05 | ||
GT1, myb-like, SANT family; GT-1, a myb-like protein, is one of the GT trihelix transcription factors. GT-1 binds the GT cis-element of rbcS-3A, a light-induced gene, as a dimer. Arabidopsis GT-1 is a trans-activator and acts in the stabilization of components of the transcription pre-initiation complex comprised of TFIIA-TBP-TATA. The isolated GT-1 DNA-binding domain is sufficient to bind DNA. This region closely resembles the myb domain, but with longer helices. It has been proposed that GT-1 may respond to light signals via calcium-dependent phosphorylation to create a light-modulated molecular switch. These proteins are members of the SANT/myb group. SANT is named after 'SWI3, ADA2, N-CoR and TFIIIB', several factors that share this domain. The SANT domain resembles the 3 alpha-helix bundle of the DNA-binding Myb domains and is found in a diverse set of proteins. Pssm-ID: 213402 Cd Length: 66 Bit Score: 41.50 E-value: 4.97e-05
|
||||||
Blast search parameters | ||||
|