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Conserved domains on  [gi|586765470|ref|XP_006855295|]
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uncharacterized protein LOC18445087 [Amborella trichopoda]

Protein Classification

endosulfine family protein( domain architecture ID 10519919)

endosulfine family protein similar to Saccharomyces cerevisiae mRNA stability protein IGO1 that is required for TORC1 to properly control gene expression and chronological life span

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Endosulfine pfam04667
cAMP-regulated phosphoprotein/endosulfine conserved region; Conserved region found in both ...
 16-95 3.73e-31

cAMP-regulated phosphoprotein/endosulfine conserved region; Conserved region found in both cAMP-regulated phosphoprotein 19 (ARPP-19) and Alpha/Beta endosulfine. No function has yet been assigned to ARPP-19. Endosulfine is the endogenous ligand for the ATP-dependent potassium (K ATP) channels which occupy a key position in the control of insulin release from the pancreatic beta cell by coupling cell polarity to metabolism. In both cases the region occupies the majority of the protein.


:

Pssm-ID: 398375  Cd Length: 80  Bit Score: 105.08  E-value: 3.73e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 586765470   16 DIGSSQEEVSTLTKKYGGIvPKKKPLISKDH-ERAFFDSADWALDKQGATQGQQSRSDVVSLRPKLQRTPHQRLPLRRPA 94
Cdd:pfam04667   1 DLSSLSPEELKLYKKYGKL-PKKKDLLSKKLqERKYFDSGDYALSKAGVKKSQKSPGGLPSLHPSPERTPHIQRRSSRSA 79


                  .
gi 586765470   95 Y 95
Cdd:pfam04667  80 C 80
 
Name Accession Description Interval E-value
Endosulfine pfam04667
cAMP-regulated phosphoprotein/endosulfine conserved region; Conserved region found in both ...
 16-95 3.73e-31

cAMP-regulated phosphoprotein/endosulfine conserved region; Conserved region found in both cAMP-regulated phosphoprotein 19 (ARPP-19) and Alpha/Beta endosulfine. No function has yet been assigned to ARPP-19. Endosulfine is the endogenous ligand for the ATP-dependent potassium (K ATP) channels which occupy a key position in the control of insulin release from the pancreatic beta cell by coupling cell polarity to metabolism. In both cases the region occupies the majority of the protein.


Pssm-ID: 398375  Cd Length: 80  Bit Score: 105.08  E-value: 3.73e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 586765470   16 DIGSSQEEVSTLTKKYGGIvPKKKPLISKDH-ERAFFDSADWALDKQGATQGQQSRSDVVSLRPKLQRTPHQRLPLRRPA 94
Cdd:pfam04667   1 DLSSLSPEELKLYKKYGKL-PKKKDLLSKKLqERKYFDSGDYALSKAGVKKSQKSPGGLPSLHPSPERTPHIQRRSSRSA 79


                  .
gi 586765470   95 Y 95
Cdd:pfam04667  80 C 80
 
Name Accession Description Interval E-value
Endosulfine pfam04667
cAMP-regulated phosphoprotein/endosulfine conserved region; Conserved region found in both ...
 16-95 3.73e-31

cAMP-regulated phosphoprotein/endosulfine conserved region; Conserved region found in both cAMP-regulated phosphoprotein 19 (ARPP-19) and Alpha/Beta endosulfine. No function has yet been assigned to ARPP-19. Endosulfine is the endogenous ligand for the ATP-dependent potassium (K ATP) channels which occupy a key position in the control of insulin release from the pancreatic beta cell by coupling cell polarity to metabolism. In both cases the region occupies the majority of the protein.


Pssm-ID: 398375  Cd Length: 80  Bit Score: 105.08  E-value: 3.73e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 586765470   16 DIGSSQEEVSTLTKKYGGIvPKKKPLISKDH-ERAFFDSADWALDKQGATQGQQSRSDVVSLRPKLQRTPHQRLPLRRPA 94
Cdd:pfam04667   1 DLSSLSPEELKLYKKYGKL-PKKKDLLSKKLqERKYFDSGDYALSKAGVKKSQKSPGGLPSLHPSPERTPHIQRRSSRSA 79


                  .
gi 586765470   95 Y 95
Cdd:pfam04667  80 C 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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