potassium channel subfamily T member 2 isoform X5 [Homo sapiens]
potassium channel family protein( domain architecture ID 13585923)
potassium channel family protein spans the cell membrane to form a conduction pathway or pore, through which selective ions such as potassium, sodium, and calcium translocate across cell membranes
List of domain hits
Name | Accession | Description | Interval | E-value | |||||
BK_channel_a | pfam03493 | Calcium-activated BK potassium channel alpha subunit; |
432-526 | 4.27e-41 | |||||
Calcium-activated BK potassium channel alpha subunit; : Pssm-ID: 460947 Cd Length: 90 Bit Score: 145.00 E-value: 4.27e-41
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Ion_trans_2 | pfam07885 | Ion channel; This family includes the two membrane helix type ion channels found in bacteria. |
206-272 | 7.78e-12 | |||||
Ion channel; This family includes the two membrane helix type ion channels found in bacteria. : Pssm-ID: 462301 [Multi-domain] Cd Length: 78 Bit Score: 61.51 E-value: 7.78e-12
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Ion_trans super family | cl37996 | Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
63-270 | 8.19e-04 | |||||
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane. The actual alignment was detected with superfamily member pfam00520: Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 41.87 E-value: 8.19e-04
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Name | Accession | Description | Interval | E-value | |||||
BK_channel_a | pfam03493 | Calcium-activated BK potassium channel alpha subunit; |
432-526 | 4.27e-41 | |||||
Calcium-activated BK potassium channel alpha subunit; Pssm-ID: 460947 Cd Length: 90 Bit Score: 145.00 E-value: 4.27e-41
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Ion_trans_2 | pfam07885 | Ion channel; This family includes the two membrane helix type ion channels found in bacteria. |
206-272 | 7.78e-12 | |||||
Ion channel; This family includes the two membrane helix type ion channels found in bacteria. Pssm-ID: 462301 [Multi-domain] Cd Length: 78 Bit Score: 61.51 E-value: 7.78e-12
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PRK10537 | PRK10537 | voltage-gated potassium channel protein; |
227-269 | 2.16e-06 | |||||
voltage-gated potassium channel protein; Pssm-ID: 236711 [Multi-domain] Cd Length: 393 Bit Score: 50.79 E-value: 2.16e-06
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Ion_trans | pfam00520 | Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
63-270 | 8.19e-04 | |||||
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane. Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 41.87 E-value: 8.19e-04
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Name | Accession | Description | Interval | E-value | |||||
BK_channel_a | pfam03493 | Calcium-activated BK potassium channel alpha subunit; |
432-526 | 4.27e-41 | |||||
Calcium-activated BK potassium channel alpha subunit; Pssm-ID: 460947 Cd Length: 90 Bit Score: 145.00 E-value: 4.27e-41
|
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Ion_trans_2 | pfam07885 | Ion channel; This family includes the two membrane helix type ion channels found in bacteria. |
206-272 | 7.78e-12 | |||||
Ion channel; This family includes the two membrane helix type ion channels found in bacteria. Pssm-ID: 462301 [Multi-domain] Cd Length: 78 Bit Score: 61.51 E-value: 7.78e-12
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PRK10537 | PRK10537 | voltage-gated potassium channel protein; |
227-269 | 2.16e-06 | |||||
voltage-gated potassium channel protein; Pssm-ID: 236711 [Multi-domain] Cd Length: 393 Bit Score: 50.79 E-value: 2.16e-06
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Ion_trans | pfam00520 | Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
63-270 | 8.19e-04 | |||||
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane. Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 41.87 E-value: 8.19e-04
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Blast search parameters | ||||
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