NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1034573555|ref|XP_016873188|]
View 

solute carrier family 22 member 10 isoform X2 [Homo sapiens]

Protein Classification

solute carrier organic anion transporter( domain architecture ID 13024332)

solute carrier organic anion transporter is a major facilitator superfamily (MFS) transporter that mediates the Na(+)-independent high affinity transport of organic anions such as pravastatin, taurocholate, methotrexate, dehydroepiandrosterone sulfate, prostaglandin E2, thromboxane B2, leukotriene C3, and the thyroid hormones thyroxine and triiodothyronine, among others

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
MFS_OAT cd17374
Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion ...
57-464 3.32e-173

Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion transporters (OATs) generally display broad substrate specificity and they facilitate the exchange of extracellular with intracellular organic anions (OAs). Several OATs have been characterized including OAT1-10 and urate anion exchanger 1 (URAT1, also called SLC22A12). Many OATs occur in renal proximal tubules, the site of active drug secretion. OATs mediate the absorption, distribution, and excretion of a diverse array of environmental toxins, and clinically important drugs, including anti-HIV therapeutics, anti-tumor drugs, antibiotics, anti-hypertensives, and anti-inflammatories, and therefore is critical for the survival of the mammalian species. OAT falls into the SLC22 (solute carrier 22) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340932 [Multi-domain]  Cd Length: 341  Bit Score: 490.26  E-value: 3.32e-173
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  57 SEADTEPCVDGWVYDQSYFPSTIVTKWDLVCDYQSLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDT 136
Cdd:cd17374     1 SEADTEPCVDGWVYDRSKFTSTIVTEWDLVCESQSLKSVAQSIFMAGLLVGALIFGHLSDRFGRKFILLLSLLQLAIFGT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 137 CAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVVILSSGALSIGQIILGGLAYVFRDWQTLHVVASVP 216
Cdd:cd17374    81 CAAFAPTFPVYCVLRFLAGFAVSGISINTLILGTEWTTPRHRALAITLTSCFFSIGQMLLAGLAYAIRDWRLLQLVVSVP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 217 FFVFFLLSRWLVesarwliitnkldeglkalrkvartngiknaeetlnievvrstmqeeldaaqtkttvcdlfrnpsmrK 296
Cdd:cd17374   161 FFLFFLYSWWLP-------------------------------------------------------------------K 173
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 297 RICILVFLRFANTIPFYGTMVNLQHVGSNIFLLQVLYGAVALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTFVPK 376
Cdd:cd17374   174 RTLILSFVWFANSFSYYGLSLDLQHLGLNVFLLQFLFGAVEVPARCLALFLLNHMGRRISQAVLLLLAGLCILANIFVPQ 253
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 377 EMQTLRVALACLGIGCSAATFSSVAVHFIELIPTVLRARASGIDLTASRIGAALAPLLMTLTVFFTTLPWIIYGIFPIIG 456
Cdd:cd17374   254 EMQTLRTVLAVLGKGSSAAAFTISYVYTAELFPTVLRQTGMGLNSMFARIGGILAPLIMLLGVYSPLLPMIIYGVLPILA 333

                  ....*...
gi 1034573555 457 GLIVFLLP 464
Cdd:cd17374   334 GLLALLLP 341
 
Name Accession Description Interval E-value
MFS_OAT cd17374
Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion ...
57-464 3.32e-173

Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion transporters (OATs) generally display broad substrate specificity and they facilitate the exchange of extracellular with intracellular organic anions (OAs). Several OATs have been characterized including OAT1-10 and urate anion exchanger 1 (URAT1, also called SLC22A12). Many OATs occur in renal proximal tubules, the site of active drug secretion. OATs mediate the absorption, distribution, and excretion of a diverse array of environmental toxins, and clinically important drugs, including anti-HIV therapeutics, anti-tumor drugs, antibiotics, anti-hypertensives, and anti-inflammatories, and therefore is critical for the survival of the mammalian species. OAT falls into the SLC22 (solute carrier 22) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340932 [Multi-domain]  Cd Length: 341  Bit Score: 490.26  E-value: 3.32e-173
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  57 SEADTEPCVDGWVYDQSYFPSTIVTKWDLVCDYQSLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDT 136
Cdd:cd17374     1 SEADTEPCVDGWVYDRSKFTSTIVTEWDLVCESQSLKSVAQSIFMAGLLVGALIFGHLSDRFGRKFILLLSLLQLAIFGT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 137 CAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVVILSSGALSIGQIILGGLAYVFRDWQTLHVVASVP 216
Cdd:cd17374    81 CAAFAPTFPVYCVLRFLAGFAVSGISINTLILGTEWTTPRHRALAITLTSCFFSIGQMLLAGLAYAIRDWRLLQLVVSVP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 217 FFVFFLLSRWLVesarwliitnkldeglkalrkvartngiknaeetlnievvrstmqeeldaaqtkttvcdlfrnpsmrK 296
Cdd:cd17374   161 FFLFFLYSWWLP-------------------------------------------------------------------K 173
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 297 RICILVFLRFANTIPFYGTMVNLQHVGSNIFLLQVLYGAVALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTFVPK 376
Cdd:cd17374   174 RTLILSFVWFANSFSYYGLSLDLQHLGLNVFLLQFLFGAVEVPARCLALFLLNHMGRRISQAVLLLLAGLCILANIFVPQ 253
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 377 EMQTLRVALACLGIGCSAATFSSVAVHFIELIPTVLRARASGIDLTASRIGAALAPLLMTLTVFFTTLPWIIYGIFPIIG 456
Cdd:cd17374   254 EMQTLRTVLAVLGKGSSAAAFTISYVYTAELFPTVLRQTGMGLNSMFARIGGILAPLIMLLGVYSPLLPMIIYGVLPILA 333

                  ....*...
gi 1034573555 457 GLIVFLLP 464
Cdd:cd17374   334 GLLALLLP 341
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
15-474 1.28e-119

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 360.10  E-value: 1.28e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  15 LSEDALLRISIPLDSNLRPEKCRRFVHPQWQLLHLNGTIHSTS----EADTEPCVDGWVYDQSYFPSTIVTKWDLVCDYQ 90
Cdd:TIGR00898  47 LSSRCELNLTLPRLPDGRPESCLRFMVDQWANPSLLGCEPLKLsdlgLAATEPCLDGWEYSYDTFSSTIVTEWDLVCEDA 126
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  91 SLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPIT 170
Cdd:TIGR00898 127 WKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNT 206
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 171 EWIRPNSKALVVILSSGALSIGQIILGGLAYVFRDWQTLHVVASVPFFVFFLLSRWLVESARWLIITNKLDEGLKALRKV 250
Cdd:TIGR00898 207 EFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRI 286
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 251 ARTNGIKnaeetLNIEVVRSTMQEELDAAQTKTTVCDLFRNPSMRKRICILVFLRFANTIPFYGTMVNLQHVGSNIFLLQ 330
Cdd:TIGR00898 287 AKINGKK-----LPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIYLDL 361
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 331 VLYGAVALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTFVPKEMQTLRVALACLGIGCSAATFSSVAVHFIELIPT 410
Cdd:TIGR00898 362 FISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPT 441
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1034573555 411 VLRARASGIDLTASRIGAALAPLLMTLTVFFTTLPWIIYGIFPIIGGLIVFLLPETKNLPLPDT 474
Cdd:TIGR00898 442 VVRNLGVGVCSTMARVGSIISPFLVYLGEKWLFLPLVLFGGLALLAGILTLFLPETKGVPLPET 505
Sugar_tr pfam00083
Sugar (and other) transporter;
68-471 2.89e-21

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 96.19  E-value: 2.89e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  68 WVYDQSYFPSTIVTKWDLVCDYQSLKSVVQFLLLtGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAP---TF 144
Cdd:pfam00083  24 TLIDFFKNFGLSKSVSSLAALSVLSGLIVSIFSV-GCFIGSLFAGKLGDRFGRKKSLLIANVLFVIGAVLQGAAKgkwSV 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 145 PVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVVILSSGALSIGQIILGGLAYVFRD------WQTLHVVASVPFF 218
Cdd:pfam00083 103 YQLIVGRVLVGIGVGGASVLAPMYISEIAPKKLRGALGSLYQLAITFGILLAYIFGLGLNKtsnsdgWRIPLGLQLVPAL 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 219 VFFLLSRWLVESARWLIITNKLDEGLKALRKVartngikNAEETLNIEVVrsTMQEELDAAQ--TKTTVCDLFRNPSMRK 296
Cdd:pfam00083 183 LLIIGLLFLPESPRWLVEKGRLEEAREVLAKL-------RGVPDVDRELD--EIKDSLEAGQeaEKASWKELFSTKTRRQ 253
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 297 RICILVFLRFA------NTIPFYGTMVnLQHVG-SNIFLLQVLYGAVALIVRCLALLTLNHMGRRisqilFMFLVGLSIL 369
Cdd:pfam00083 254 RLLIGVMLQIFqqltgiNAIFYYSTTI-FENLGlSDSFLVTIIVGVVNFVFTFIAIFLVDRFGRR-----PLLLLGAAGM 327
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 370 ANTFV------------PKEMQTLRVALACLGIGCSAATFSSV-AVHFIELIPTVLRARASGIDLTASRIGAALAPLLMT 436
Cdd:pfam00083 328 AICFVilgivallgvskSDWAGIVAIVFIALFIAFFAMGWGPVpWVIVSELFPLSVRSKAMALATAANWLANFLIGFLFP 407
                         410       420       430
                  ....*....|....*....|....*....|....*...
gi 1034573555 437 LTVFFTTLPW--IIYGIFPIIGGLIVFL-LPETKNLPL 471
Cdd:pfam00083 408 IITDAIGLGYtfFIFAGLLVLFIIFVFFfVPETKGRTL 445
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
94-431 6.11e-19

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 88.11  E-value: 6.11e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  94 SVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWI 173
Cdd:COG2814    48 GLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLCALAPSLWLLLAARFLQGLGAGALFPAALALIADLV 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 174 RPNSKALVVILSSGALSIGQII---LGGLAYVFRDWQTLHVVASVPFFVFFLLSRWLVESARwliitnkldeglkalrkv 250
Cdd:COG2814   128 PPERRGRALGLLGAGLGLGPALgplLGGLLADLFGWRWVFLVNAVLALLALLLLLRLLPESR------------------ 189
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 251 artngiknaeetlnievvrstmqeELDAAQTKTTVCDLFRNPSMRKRICILVFLRFA-----NTIPFYGTMVnLQHVGSN 325
Cdd:COG2814   190 ------------------------PAARARLRGSLRELLRRPRLLLLLLLAFLLGFGffalfTYLPLYLQEV-LGLSASA 244
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 326 IFLLQVLYGAVALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTFVPkEMQTLRVALACLGIGcSAATFSSVAVHFI 405
Cdd:COG2814   245 AGLLLALFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLLLALAG-SLWLLLLALFLLGFG-FGLLFPLLQALVA 322
                         330       340
                  ....*....|....*....|....*.
gi 1034573555 406 ELIPTVLRARASGIDLTASRIGAALA 431
Cdd:COG2814   323 ELAPPEARGRASGLYNSAFFLGGPLA 348
xylE PRK10077
D-xylose transporter XylE; Provisional
101-489 8.89e-09

D-xylose transporter XylE; Provisional


Pssm-ID: 182225 [Multi-domain]  Cd Length: 479  Bit Score: 57.78  E-value: 8.89e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 101 LTGMLVGGIIGGHVSDRFGRRFILRWC---------------LLQLAITDTCAAFAPTFPVYCVLRFLA-GFSSMIiisn 164
Cdd:PRK10077   65 LIGCIIGGALGGYCSNRFGRRDSLKIAavlffisalgsawpeFGFTSIGPDNTGYVPEFVIYRIIGGIGvGLASML---- 140
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 165 NSLPITEWIRPNSKALVVILSSGALSIGQ---------IILGGLAYVFRD--WQTLHVVASVPFFVFFLLSRWLVESARW 233
Cdd:PRK10077  141 SPMYIAEIAPAHIRGKLVSFNQFAIIFGQlvvyfvnyfIARSGDASWLNTdgWRYMFASEAIPALLFLMLLYFVPETPRY 220
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 234 LIITNKLDEGLKALRKVartNGIKNAEETLniEVVRSTMQEeldaaqTKTTVCDLFRNPSMRKRICIL--VFLRFA--NT 309
Cdd:PRK10077  221 LMSRGKQEQAEGILRKI---MGNTLATQAL--QEIKHSLDH------GRKTGGKLLMFGVGVIVIGVMlsVFQQFVgiNV 289
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 310 IPFYGTMV--NLQHVGSNIFLLQVLYGAVALIVRCLALLTLNHMGRRISQI---LFMfLVGLSILANTFvpkEMQTLRVa 384
Cdd:PRK10077  290 VLYYAPEIfkTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIigaLGM-AIGMFSLGTAF---YTQAPGI- 364
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 385 LACLGIGCSAATFSS-----VAVHFIELIPTVLRARASGIDLTASRIGAALA----PLLMTLTV----FFTTLPWIIYGI 451
Cdd:PRK10077  365 VALLSMLFYVAAFAMswgpvCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVswtfPMMDKNSWlvahFHNGFSYWIYGC 444
                         410       420       430
                  ....*....|....*....|....*....|....*....
gi 1034573555 452 FPIIGGLIVF-LLPETKNlplpDTIKDVENQKKNLKEKA 489
Cdd:PRK10077  445 MGVLAALFMWkFVPETKG----KTLEEMEALWEPETKKT 479
 
Name Accession Description Interval E-value
MFS_OAT cd17374
Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion ...
57-464 3.32e-173

Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion transporters (OATs) generally display broad substrate specificity and they facilitate the exchange of extracellular with intracellular organic anions (OAs). Several OATs have been characterized including OAT1-10 and urate anion exchanger 1 (URAT1, also called SLC22A12). Many OATs occur in renal proximal tubules, the site of active drug secretion. OATs mediate the absorption, distribution, and excretion of a diverse array of environmental toxins, and clinically important drugs, including anti-HIV therapeutics, anti-tumor drugs, antibiotics, anti-hypertensives, and anti-inflammatories, and therefore is critical for the survival of the mammalian species. OAT falls into the SLC22 (solute carrier 22) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340932 [Multi-domain]  Cd Length: 341  Bit Score: 490.26  E-value: 3.32e-173
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  57 SEADTEPCVDGWVYDQSYFPSTIVTKWDLVCDYQSLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDT 136
Cdd:cd17374     1 SEADTEPCVDGWVYDRSKFTSTIVTEWDLVCESQSLKSVAQSIFMAGLLVGALIFGHLSDRFGRKFILLLSLLQLAIFGT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 137 CAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVVILSSGALSIGQIILGGLAYVFRDWQTLHVVASVP 216
Cdd:cd17374    81 CAAFAPTFPVYCVLRFLAGFAVSGISINTLILGTEWTTPRHRALAITLTSCFFSIGQMLLAGLAYAIRDWRLLQLVVSVP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 217 FFVFFLLSRWLVesarwliitnkldeglkalrkvartngiknaeetlnievvrstmqeeldaaqtkttvcdlfrnpsmrK 296
Cdd:cd17374   161 FFLFFLYSWWLP-------------------------------------------------------------------K 173
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 297 RICILVFLRFANTIPFYGTMVNLQHVGSNIFLLQVLYGAVALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTFVPK 376
Cdd:cd17374   174 RTLILSFVWFANSFSYYGLSLDLQHLGLNVFLLQFLFGAVEVPARCLALFLLNHMGRRISQAVLLLLAGLCILANIFVPQ 253
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 377 EMQTLRVALACLGIGCSAATFSSVAVHFIELIPTVLRARASGIDLTASRIGAALAPLLMTLTVFFTTLPWIIYGIFPIIG 456
Cdd:cd17374   254 EMQTLRTVLAVLGKGSSAAAFTISYVYTAELFPTVLRQTGMGLNSMFARIGGILAPLIMLLGVYSPLLPMIIYGVLPILA 333

                  ....*...
gi 1034573555 457 GLIVFLLP 464
Cdd:cd17374   334 GLLALLLP 341
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
15-474 1.28e-119

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 360.10  E-value: 1.28e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  15 LSEDALLRISIPLDSNLRPEKCRRFVHPQWQLLHLNGTIHSTS----EADTEPCVDGWVYDQSYFPSTIVTKWDLVCDYQ 90
Cdd:TIGR00898  47 LSSRCELNLTLPRLPDGRPESCLRFMVDQWANPSLLGCEPLKLsdlgLAATEPCLDGWEYSYDTFSSTIVTEWDLVCEDA 126
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  91 SLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPIT 170
Cdd:TIGR00898 127 WKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNT 206
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 171 EWIRPNSKALVVILSSGALSIGQIILGGLAYVFRDWQTLHVVASVPFFVFFLLSRWLVESARWLIITNKLDEGLKALRKV 250
Cdd:TIGR00898 207 EFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRI 286
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 251 ARTNGIKnaeetLNIEVVRSTMQEELDAAQTKTTVCDLFRNPSMRKRICILVFLRFANTIPFYGTMVNLQHVGSNIFLLQ 330
Cdd:TIGR00898 287 AKINGKK-----LPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIYLDL 361
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 331 VLYGAVALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTFVPKEMQTLRVALACLGIGCSAATFSSVAVHFIELIPT 410
Cdd:TIGR00898 362 FISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPT 441
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1034573555 411 VLRARASGIDLTASRIGAALAPLLMTLTVFFTTLPWIIYGIFPIIGGLIVFLLPETKNLPLPDT 474
Cdd:TIGR00898 442 VVRNLGVGVCSTMARVGSIISPFLVYLGEKWLFLPLVLFGGLALLAGILTLFLPETKGVPLPET 505
MFS_SLC22A6_OAT1_like cd17446
Solute carrier family 22 member 6 (also called Organic anion transporter 1) and similar ...
59-464 3.98e-100

Solute carrier family 22 member 6 (also called Organic anion transporter 1) and similar transporters of the Major Facilitator Superfamily; This subfamily includes solute carrier family 22 member 6 (SLC22A6, also called organic anion transporter 1 or OAT1 or para-aminohippurate (PAH) transporter), SLC22A8 (or OAT3), and SLC22A20 (or OAT6). OAT1 and OAT3 are involved in the renal elimination of endogenous and exogenous organic anions (OAs). They function as OA exchangers, coupling the uptake of OAs against an electrochemical gradient with the efflux of intracellular dicarboxylates. SLC22A20 is an OA transporter that mediates the uptake of estrone sulfate. The OAT1-like subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341004 [Multi-domain]  Cd Length: 339  Bit Score: 304.34  E-value: 3.98e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  59 ADTEPCVDGWVYDQSYFPSTIVTKWDLVCDYQSLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCA 138
Cdd:cd17446     1 LATEPCTDGWVYDKSEFPSTIITEWDLVCNHRALRQLAQSIYMAGVLVGAIVFGGLSDRFGRRPLLIWSYLQMAVSGTCA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 139 AFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVVILSSGALSIGQIILGGLAYVFRDWQTLHVVASVPFF 218
Cdd:cd17446    81 AFSPSFPIYCVFRFLTGMALSGIVLNSVSLNVEWMPTRVRAVVGTLLGYCYTLGQLILAGVAYAIRDWRWLQLAVSLPFF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 219 VFFLLSRWLVesarwliitnkldeglkalrkvartngiknaeetlnievvrstmqeeldaaqtKTTVCdlfrnpsmrkri 298
Cdd:cd17446   161 IFFLYSWWFP-----------------------------------------------------RITFC------------ 175
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 299 ciLVFLRFANTIPFYGTMVNLQHVGSNIFLLQVLYGAVALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTFVPKEM 378
Cdd:cd17446   176 --LSLVWFSTSFAYYGLAMDLQKFGVSIYLIQIIFGAVDIPAKFISTLTMSYLGRRPTQAAALILAGIMILANIFVPQDL 253
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 379 QTLRVALACLGIGCSAATFSSVAVHFIELIPTVLRARASGIDLTASRIGAALAPLLMTLTVFFTTLPWIIYGIFPIIGGL 458
Cdd:cd17446   254 QTVRTALAVFGKGCLAASFNCVYLYTGELYPTVIRQTGMGLGSTMARLGGIVAPLVKMLGEYYPFLPLIIYGAAPILSGI 333

                  ....*.
gi 1034573555 459 IVFLLP 464
Cdd:cd17446   334 AACFLP 339
MFS_SLC22 cd17317
Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major ...
67-464 3.93e-71

Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily; The Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340875 [Multi-domain]  Cd Length: 331  Bit Score: 229.00  E-value: 3.93e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  67 GWVYDQSYFPSTIVTKWDLVCDYQSLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPV 146
Cdd:cd17317     1 GWEFDYSVSESTIVTEWDLVCDRDWLVALVQTIFFLGVLIGSLLFGYLADRFGRRPVLLLGLVLQIVCGVLSAFSPSYEL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 147 YCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVVILSSGALSIGQIILGGLAYVFRDWQTLHVVASVPFFVFFLLSRW 226
Cdd:cd17317    81 FLVLRFLVGVTSAGIFTVGFVLGMEIVGPKYRSFVGILFGLFWALGYMLLALLAYLIRDWRWLQLAISLPGLLFLLLLWW 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 227 LVesarwliitnkldeglkalrkvartngiknaeetlnievvrstmqeeldaaqtkttvcdlfrnpsmrKRICILVFLRF 306
Cdd:cd17317   161 LP-------------------------------------------------------------------RRTIIVGLIWF 173
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 307 ANTIPFYGTMVNLQHVGSNIFLLQVLYGAVALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTFVPKEMQTLRVALA 386
Cdd:cd17317   174 VTSLVYYGLSLNSSNLGGNLYLNFFLSGLVEIPAYFLALLLLDRLGRRWTLSGSLLLAGLACLVTALLPDDENTLALTLA 253
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1034573555 387 CLGIGCSAATFSSVAVHFIELIPTVLRARASGIDLTASRIGAALAPLLMTLTVFFTTLPWIIYGIFPIIGGLIVFLLP 464
Cdd:cd17317   254 LVGKFAISAAFSVIYLYTAELYPTVVRNTGVGLCSTVARVGAILAPFIVLLGKIGPLLPLIIFGVLALLGGLLTLLLP 331
MFS_SLC22A7_OAT2 cd17447
Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major ...
57-464 2.15e-55

Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 7 (SLC22A7), also called organic anion transporter 2 (OAT2) mediates sodium-independent transport of a variety of organic anions including prostaglandin E2, prostaglandin F2, tetracycline, bumetanide, estrone sulfate, glutarate, dehydroepiandrosterone sulfate, allopurinol, 5-fluorouracil, paclitaxel, L-ascorbic acid, salicylate, ethotrexate, and alpha-ketoglutarate. It also plays a role in renal uric acid uptake from blood as a first step of tubular secretion. OAT2 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS)of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341005 [Multi-domain]  Cd Length: 341  Bit Score: 188.40  E-value: 2.15e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  57 SEADTEPCVDGWVYDQSYFPSTIVTKWDLVCDYQSLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDT 136
Cdd:cd17447     1 SDLPVVPCQNGWVYDHSTFSSTIATEWDLVCDRKGLNQATATFFFAGVTMGAVAFGYLSDRFGRKRMLLVAYVLSLVFGL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 137 CAAFAPTFPVYCVLRFLAGF--SSMIIISnnsLPIT-EWIRPNSKALVVILSSGALSIGQIILGGLAYVFRDWQTLHVVA 213
Cdd:cd17447    81 ASAFSVSYVMFAITRTLTGFalTGFSIIS---MVLCvEWVDIEHRTVAGVLISLFWTVGNMLLALVAYLIRDWRWLILAV 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 214 SVPFFVFFLLSRWLvesarwliitnkldeglkalrkvartngiknaeetlnievvrstmqeeldaaqTKTTVCdlfrnps 293
Cdd:cd17447   158 TLPCAPGIITWWWV-----------------------------------------------------PKISLC------- 177
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 294 mrkriCILVFlrFANTIPFYGTMVNLQHVGSNIFLLQVLYGAVALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTF 373
Cdd:cd17447   178 -----TGIVW--FGVAFTYYGISFNISGFGLNVYLTQFIYGAIELPAKLLAYLLLDRIGRRLTQAGSLILTGLSIGINIL 250
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 374 VPKEMQTLRVALACLGIGCSAATFSSVAVHFIELIPTVLRARASGIDLTASRIGAALAPLLMTLTVFFTTLPWIIYGIFP 453
Cdd:cd17447   251 IPSEFTVVRTVIAVLGKGFSEAAFTTVFLYTSELYPTVLRQNGMGYTSFIARLGGSLAPLVILLDDVWLSLPQVIFCGVA 330
                         410
                  ....*....|.
gi 1034573555 454 IIGGLIVFLLP 464
Cdd:cd17447   331 LLAGGVAFLLP 341
MFS_SLC22A1_2_3 cd17379
Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, ...
63-464 8.13e-45

Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, and 3) of the Major Facilitator Superfamily of transporters; This sufamily includes solute carrier family 22 member 1 (SLC22A1, also called organic cation transporter 1 or OCT1), SLC22A2 (or OCT2), SLC22A3 (or OCT3), and similar proteins. OCT1-3 have similar basic functional properties: they are able to translocate a variety of structurally different organic cations in both directions across the plasma membrane; to translocate organic cations independently from sodium, chloride or proton gradients; and to function as electrogenic uniporters for cations or as electroneutral cation exchangers. They show overlapping but distinct substrate and inhibitor specificities, and different tissue expression pattern. In humans, OCT1 is strongly expressed in the liver, OCT2 is highly expressed in the kidney where it is localized at the basolateral membrane of renal proximal tubules, and OCT3 is most strongly expressed in skeletal muscle. OCTs are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. The SLC22A1-3 subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340937 [Multi-domain]  Cd Length: 340  Bit Score: 160.21  E-value: 8.13e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  63 PCVDGWVYDQSYfpSTIVTKWDLVCDYQSLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAP 142
Cdd:cd17379     7 PCQDGWVYNTPR--SSIVTEFNLVCEDAWKLDLFQSSLNLGFLIGSIVIGYLADRFGRKVCFLISILGNGVSGVLMAFSP 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 143 TFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVVILSSGALSIGQIILGGLAYVFRDWQTLHVVASVPFFvFFL 222
Cdd:cd17379    85 NYPWFLIFRFLQGLFGKGGWMTGYVLVTEFVGSKYRRTVGIVYQMFFTLGLLILPGIAYFIPHWRWLQLAVTLPNF-LFL 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 223 LSRWLVEsarwliitnkldeglkalrkvartngiknaeetlnievvrstmqeeldaaqtkttvcdlfrnpsmrKRICILV 302
Cdd:cd17379   164 LYYWFIP------------------------------------------------------------------KHTFILM 177
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 303 FLRFANTIPFYGTMVNLQHVGSNIFLLQVLYGAVALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTFVPKEMQTLR 382
Cdd:cd17379   178 YAWFTSAVVYQGLIMRLGITGGNLYLDFFISALVELPAAFIILLTIDRIGRRLPFAASNIVAGAACLITAFIPPDLHWLK 257
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 383 VALACLGIGCSAATFSSVAVHFIELIPTVLRARASGIDLTASRIGAALAP-LLMTLTVFFTTLPWIIYGIFPIIGGLIVF 461
Cdd:cd17379   258 TTIACVGRLGITMAFEIVCLVNTELYPTFLRNLGVSVCSSLCDIGGIIAPfLLYRLAEIWLELPLIVFGVLALVAGGLVL 337

                  ...
gi 1034573555 462 LLP 464
Cdd:cd17379   338 LLP 340
MFS_SLC22A4_5_OCTN1_2 cd17376
Solute carrier family 22 members 4 and 5 (also called Organic cation/carnitine transporters 1 ...
57-464 6.65e-42

Solute carrier family 22 members 4 and 5 (also called Organic cation/carnitine transporters 1 and 2) of the Major Facilitator Superfamily of transporters; This subfamily is composed of solute carrier family 22 members 4 (SLC22A4) and 5 (SLC22A5), and similar proteins. SLC22A4 is also called ergothioneine transporter (ETT) or organic cation/carnitine transporter 1 (OCTN1). It is a sodium-ion dependent, low affinity carnitine transporter, and a highly specific transporter for the uptake of ergothioneine (ET), a thiolated derivative of histidine with antioxidant properties. ET is a natural compound produced only by certain fungi and bacteria and must be absorbed from the diet by humans and other vetebrates. SLC22A5, also called organic cation/carnitine transporter 2 (OCTN2), is a sodium-ion dependent, high affinity carnitine transporter involved in the active cellular uptake of carnitine. SLC22A4/5 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340934 [Multi-domain]  Cd Length: 342  Bit Score: 152.62  E-value: 6.65e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  57 SEADTEPCVDGWVYDQSYFPSTIVTKWDLVCDYQSLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDT 136
Cdd:cd17376     1 TQIEQEPCLDGWEYSQDVYLSTIVTEWNLVCEDDWKVPLTTSLFFVGVLLGSFISGQLSDRFGRKKVLFATMAVQTGFSF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 137 CAAFAPTFPVYCVLRFLAGFSSMiiisnnSLPITEWIRPN---SKALVVILSS-GAL---SIGQIILGGLAYVFRDWQTL 209
Cdd:cd17376    81 LQIFSPSWEMFTVLFVIVGMGQI------SNYVVAFVLGTeilGKSVRILFSTlGVCifyAIGYMLLPLFAYFIRDWRML 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 210 HVVASVPFFVFFLLsrWlvesarWLIITNKLdeglkalrkvartngiknaeetlnievvrstmqeeldaaqtkttvcdlf 289
Cdd:cd17376   155 LLALTLPGVLCVPL--W------WFIPITTI------------------------------------------------- 177
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 290 rnpsmrkrICILvfLRFANTIPFYGTMVNLQHVGSNIFLLQVLYGAVALIVRCLALLTLNHMGRRISQILFMFLVGLSIL 369
Cdd:cd17376   178 --------MSLL--LWMAISVGYFGLSLNTPNLHGDPYLNCFLSAVIEVPAYIIAWLLLRSLPRRYSIAATLVLGGGVLL 247
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 370 ANTFVPKEMQTLRVALACLGIGCSAATFSSVAVHFIELIPTVLRARASGIDLTASRIGAALAPLLMTLTVFFTTLPWIIY 449
Cdd:cd17376   248 FIQLVPTDLQVLATALVMLGKFGITAAFSMVYVYTAELYPTVVRNMGVGVCSTASRIGSIISPYFVYLGAYDRYLPYILM 327
                         410
                  ....*....|....*
gi 1034573555 450 GIFPIIGGLIVFLLP 464
Cdd:cd17376   328 GSLTVLIGILTLFLP 342
MFS_OCT_plant cd17378
Plant organic cation/carnitine transporters of the Major Facilitator Superfamily of ...
68-464 1.26e-31

Plant organic cation/carnitine transporters of the Major Facilitator Superfamily of transporters; Plant organic cation/carnitine transporters (OCTs) are sequence-similar to their animal counterparts, which are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. Little is know about plant OCTs. In Arabidopsis, there are six genes belonging to this family that show distinct, organ-specific expression pattern of the individual genes. AtOCT1 has been found to affect root development and carnitine-related responses in Arabidopsis. AtOCT4, 5 and 6 are up-regulated during drought stress, AtOCT3 and 5 during cold stress and AtOCT5 and 6 during salt stress treatments. Plant OCTs belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340936 [Multi-domain]  Cd Length: 342  Bit Score: 124.39  E-value: 1.26e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  68 WVYDQSyFPSTIVTKWDLVCDYQSLKSVVQFLLLTGMLVGGIIGGHVSD-RFGRRFILRWCLLQLAITDTCAAFAPTFPV 146
Cdd:cd17378    11 WEWDGG-SKVSIVSEWGLICAGSFLVGLPQSSFFVGCLIGSGVLGHLADsSLGRKNLLFLSCLLMALSGIATAFSPNYWV 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 147 YCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVVILSSGALSIGQIILGGLAYV-FRDWQTLHVVASVPFFVFFLLSR 225
Cdd:cd17378    90 YAFLRFLTGFGRSGIGTCALVLATEPVGPKWRGQVGMSTFFFFVLGFMSLPGIAYLnGSSWRVLYFWTSIPALIYCILVY 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 226 WLVesarwliitnkldeglkalrkvartngiknaeetlnievvrstmqeeldaaqtkttvcdlfrnpsmrKRICILVFLR 305
Cdd:cd17378   170 LFA-------------------------------------------------------------------RRLLAVMVIG 182
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 306 FANTIPFYGTMVNLQHVGSNIFLLQVLYGAVALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTFVPKEMQT-LRVA 384
Cdd:cd17378   183 FGIGMVYYGIPLAVGNLKFNIYLSVALNALSELPAFVITAFLLDRFGRRPSLLGFTLLSGASCLLCFVLSIGGTTsLQIA 262
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 385 LACLGIGCSAATFSSVAVHFIELIPTVLRARASGIDLTASRIGAALAPLLMTLTVFFTTLPWIIYGIFPIIGGLIVFLLP 464
Cdd:cd17378   263 LELVGFFGAAGAFNLLYIYTVELFPTCVRNAALGMLRQALVVGGIFAPFIVSLGRKNAALSFGVFGVAILLLGLFALGLP 342
MFS_SLC22A16_CT2 cd17375
Solute carrier family 22 member 16 (also called Carnitine transporter 2) of the Major ...
63-464 2.03e-28

Solute carrier family 22 member 16 (also called Carnitine transporter 2) of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 16 (SLC22A16) is also called carnitine transporter 2 (CT2), fly-like putative transporter 2 (FLIPT2), organic cation transporter OKB1, or organic cation/carnitine transporter 6 (OCT6). It is a partially sodium-ion dependent high affinity carnitine transporter. It also transports organic cations such as tetraethylammonium (TEA) and doxorubicin. It is one of several organic cation transporters (OCTs) that falls into the SLC22 (solute carrier 22) family. OCTs are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. SLC22A16 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340933 [Multi-domain]  Cd Length: 341  Bit Score: 115.23  E-value: 2.03e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  63 PCVDGWVYDQSYFPSTIVTKWDLVCDYQSLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAP 142
Cdd:cd17375     7 SCSDGFVYDQSKWESSIVTDWDLVCDREWLAKLIQPIFMLGVLLGAVIFGDIADRIGRRPVLWFTSTGQFVFGIAVAFTF 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 143 TFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVVILSSGALSIGQIILGGLAYVFRDW---QTLHVVASVPffv 219
Cdd:cd17375    87 DYYSFVIVRFLLAMVSSGYLVVVFVYVTEFTGIKARTWASMHVHAFFAVGIMVVALVGYLVRTWwiyQIILSLVTIP--- 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 220 fFLLSRWLvesarwliitnkldeglkalrkvartngiknaeetlnievvrstmqeeldaaqtkttvcdlfrnpsMRKRIC 299
Cdd:cd17375   164 -FILCCWM------------------------------------------------------------------LPKRTI 176
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 300 ILVFLRFANTIPFYGTMVNLQHVGSNIFLLQVLYGAVALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTFVPKEMQ 379
Cdd:cd17375   177 TVWLIWFTGSLGYYVFSLGSVNLGGNEYLNLFLVGAVEIPSYIIACIGMDKLGRRNTLAPFLLLSALACMLIMVIPQDYE 256
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 380 TLRVALACLGIGCSAATFSSVAVHFIELIPTVLRARASGIDLTASRIGAALAPLLMTLTVFFTTLPWIIYGIFPIIGGLI 459
Cdd:cd17375   257 VLTIVLSMTGKFAIAIAFGLIYLYTAELYPTIVRSLAVGSGSMMCRVGSVVAPFCVYLSDVWIFLPQLLVGIMAFLSGIL 336

                  ....*
gi 1034573555 460 VFLLP 464
Cdd:cd17375   337 TLMLP 341
MFS_SLC22A15 cd17377
Solute carrier family 22 member 15 of the Major Facilitator Superfamily of transporters; ...
69-464 2.24e-25

Solute carrier family 22 member 15 of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 15 (SLC22A15) is also called fly-like putative transporter 1 (FLIPT1). It is expressed at the highest levels in the kidney and brain. It is a member of the SLC22 family of transporters, which includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. SLC22A15 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340935 [Multi-domain]  Cd Length: 353  Bit Score: 106.79  E-value: 2.24e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  69 VYDQSYFPStIVTKWDLVCDYQSLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYC 148
Cdd:cd17377    18 VHFSSSFTS-IVSEWFLVGNAAYKVSLASSFFFAGVLIGVVSFGQLSDRFGRKPVYLTGLALDILFAYFNALAPSYEFFA 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 149 VLRFLAGF--SSMIIISnnSLPITEWIRPNSKALVVILSSGALSIGQIILGGLAYVFRDWQTLHVVASVPFFVFFLLSRW 226
Cdd:cd17377    97 VSRFLVGVmnGGMSLVA--FVLLNECVGKSYWALAGSLGGLFFAVGIAQYALLGYFIRSWRTLAVVVNLQGTLVFLLSLF 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 227 LvesarwliitnkldeglkalrkvartngiknaeetlnievvrstmqeeldaaqtkttvcdlfrnPSmrkRICILVFLRF 306
Cdd:cd17377   175 I----------------------------------------------------------------PG---RTLILMYVWF 187
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 307 ANTIPFYGTMVNLQHVGSNIFLLQVLYGAVALIVRCLALLTLNH--MGRRISQILFMFLVGLSILANTFVPKEMQTLRVA 384
Cdd:cd17377   188 VCSLVYYGLTLNAGDLGGNIYLNLALSGLVELPAYPLCIYLINQkwSGRRRTLAGFLFLGGIACLLVMFVPEKKDSGVFA 267
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 385 ------LACLGIGCSAATFSSVAVHFIELIPTVLRARASGIDLTASRIGAALAPLLMTLTVFFTTLPWIIYGIFPIIGGL 458
Cdd:cd17377   268 vvnstsLSLLGKLTISAAFNIVYIYTSELYPTVVRNAGLGVCSMFSRVGGIIAPFIPSLKSVQWSLPFIVFGASGLSAGL 347

                  ....*.
gi 1034573555 459 IVFLLP 464
Cdd:cd17377   348 LSLLLP 353
Sugar_tr pfam00083
Sugar (and other) transporter;
68-471 2.89e-21

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 96.19  E-value: 2.89e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  68 WVYDQSYFPSTIVTKWDLVCDYQSLKSVVQFLLLtGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAP---TF 144
Cdd:pfam00083  24 TLIDFFKNFGLSKSVSSLAALSVLSGLIVSIFSV-GCFIGSLFAGKLGDRFGRKKSLLIANVLFVIGAVLQGAAKgkwSV 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 145 PVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVVILSSGALSIGQIILGGLAYVFRD------WQTLHVVASVPFF 218
Cdd:pfam00083 103 YQLIVGRVLVGIGVGGASVLAPMYISEIAPKKLRGALGSLYQLAITFGILLAYIFGLGLNKtsnsdgWRIPLGLQLVPAL 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 219 VFFLLSRWLVESARWLIITNKLDEGLKALRKVartngikNAEETLNIEVVrsTMQEELDAAQ--TKTTVCDLFRNPSMRK 296
Cdd:pfam00083 183 LLIIGLLFLPESPRWLVEKGRLEEAREVLAKL-------RGVPDVDRELD--EIKDSLEAGQeaEKASWKELFSTKTRRQ 253
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 297 RICILVFLRFA------NTIPFYGTMVnLQHVG-SNIFLLQVLYGAVALIVRCLALLTLNHMGRRisqilFMFLVGLSIL 369
Cdd:pfam00083 254 RLLIGVMLQIFqqltgiNAIFYYSTTI-FENLGlSDSFLVTIIVGVVNFVFTFIAIFLVDRFGRR-----PLLLLGAAGM 327
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 370 ANTFV------------PKEMQTLRVALACLGIGCSAATFSSV-AVHFIELIPTVLRARASGIDLTASRIGAALAPLLMT 436
Cdd:pfam00083 328 AICFVilgivallgvskSDWAGIVAIVFIALFIAFFAMGWGPVpWVIVSELFPLSVRSKAMALATAANWLANFLIGFLFP 407
                         410       420       430
                  ....*....|....*....|....*....|....*...
gi 1034573555 437 LTVFFTTLPW--IIYGIFPIIGGLIVFL-LPETKNLPL 471
Cdd:pfam00083 408 IITDAIGLGYtfFIFAGLLVLFIIFVFFfVPETKGRTL 445
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
103-460 1.72e-20

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 92.66  E-value: 1.72e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 103 GMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVV 182
Cdd:cd17316    48 GRPIGALLFGYLGDRIGRKKALILTLLLFGLATLLIGLLPTPILLLVLRFLQGIGIGGEYPGASTYVAEFAPSKRRGFAL 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 183 ILSSGALSIGQIILGGLAYVFRD-------WQTLHVVASVPFFVFFLLsrwlvesarwliitnkldeglkalrkvartng 255
Cdd:cd17316   128 GLLQSGWALGALLAALVASLLIPllsgdwgWRILFLIGALPALLALLL-------------------------------- 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 256 iknaeetlnievvrstmqeeldaaqtkttvcdlfrnpsmRKRICILVFLRFANTIPFYGTMV--------NLQHVGSNIF 327
Cdd:cd17316   176 ---------------------------------------RRRTLLLILLWFFISFGYYGLTTflptylqtVLGLSPATSS 216
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 328 LLQVLYGAVALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTFVPKEMQTLRVALACLGIGCSAATFSSVAVHFIEL 407
Cdd:cd17316   217 LYLLLISLGALVGALIAGLLSDRIGRKKTLVIGLILSGILALPLFYLLSGSPTLLLLLLFILSFFVGGVWGALYAYLAEL 296
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1034573555 408 IPTVLRARASGIDLTASRIGAALAPLL--MTLTVFFTTLPWIIYGIFPIIGGLIV 460
Cdd:cd17316   297 FPTEVRATGVGLSYNLGRLGGGGAPPLiaLLLASTGGTGVPALILALLAIVALIV 351
MFS_SLC22A31 cd17443
Solute carrier family 22, member 31 of the Major Facilitator Superfamily; Solute carrier ...
57-464 4.01e-19

Solute carrier family 22, member 31 of the Major Facilitator Superfamily; Solute carrier family 22, member 31 (SLC22A31) is an uncharacterized member of the SLC22 family of transporters, which includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. SLC22A31 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341001 [Multi-domain]  Cd Length: 343  Bit Score: 88.29  E-value: 4.01e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  57 SEADTEPCVDGWVYD-QSYFPSTIVTKWDLVCDYQSLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITD 135
Cdd:cd17443     1 PSNLAVLCTGGWPFSaAAGLGSNLVTEWNLVCDDGWKVPLEKISYLLGWLLGYIILGAGCDRLGRRAAFVLSLVLATLLG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 136 TCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVVILSSGALSIGQIILGGLAYVFRDWQTLHVVASV 215
Cdd:cd17443    81 VSVALSASPPTFLVLRLLQGGTLAGVFLSLYIARLELCDPSHRLMVSMGAGFFSVAGELLLPGLAVLCRDWRVLQGVGTL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 216 PffVFFLLSRWLVESARWLIItnkldeGLKALRKvartNGIknaeetlnievvrstmqeeldaaqtkttvcdlfrnpsmr 295
Cdd:cd17443   161 P--LLLLLLYWCFPSRNGLIL------GFTAFIG----GGI--------------------------------------- 189
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 296 kRICilvflrFANTIPFYGTMVNLQhvgsniFLLQVLYGAVALIVRClalLTLNHMGRRISQILFMFLVGLS---ILANT 372
Cdd:cd17443   190 -RYC------FARNLAPFVPTFYLP------YFLQAGLEALACIFLC---LTVDRCGRRGVLLLGTIVTGLSsllLLALT 253
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 373 -FVPKEmqtLRVALACLGIGCSAATFSSVAVHFIELIPTVLRARASGIDLTASRIGAALAPlLMTL---TVFFttLPWII 448
Cdd:cd17443   254 qYLHGG---LVLVLSVVGLLASHAVSMLSMFFAAEVLPTVIRGAGLGLIMGAGFLGRAAGP-LMELqnkQGYF--LHHVV 327
                         410
                  ....*....|....*.
gi 1034573555 449 YGIFPIIGGLIVFLLP 464
Cdd:cd17443   328 FASFAVLSVLCILLLP 343
MFS_GLUT_Class1_2_like cd17357
Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This ...
89-468 5.76e-19

Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This subfamily includes Class 1 and Class 2 glucose transporters (GLUTs) including Solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1, also called glucose transporter type 1 or GLUT1), SLC2A2-5 (GLUT2-5), SLC2A7 (GLUT7), SLC2A9 (GLUT9), SLC2A11 (GLUT11), SLC2A14 (GLUT14), and similar proteins. GLUTs are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-5 are the most thoroughly studied and are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340915 [Multi-domain]  Cd Length: 447  Bit Score: 89.24  E-value: 5.76e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  89 YQSLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWC-LLQL--AITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNN 165
Cdd:cd17357    47 LDLLWSLIVSIFFIGGAIGSFISAFLANRFGRKNGLLISnALLVvsSLLMFLSKSAKSPELLIFGRFLVGIACGLSTGFV 126
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 166 SLPITEWIRPNSKALVVILSSGALSIGqIILG---GLAYVFRDWQTLHVVASVPFF---VFFLLSRWLVESARWLIITNK 239
Cdd:cd17357   127 PMYLQEISPSELRGALGSLTQIGVTLG-ILLGqvfGLPSVLGTETLWPYLLFFPGIpalLQLAALPFFPESPKFLLISKG 205
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 240 LDEglKALRKVARTNGIKNAEETLNIEVVRSTMQEEldaAQTKTTVCDLFRNPSMRKRICILVFLRFA------NTIPFY 313
Cdd:cd17357   206 DEE--EAEKSLKFLRGIEDDVDQELEEIKKESEQMG---DQKQVSLMQLLRDPSLRLPLLLVLVVSASqqfsgiNAIFFY 280
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 314 GTMVnLQHVG--------SNIFLlqvlyGAVALIVRCLALLTLNHMGRRisqILFMFLVGLSILANTFVPKEMQtLRVAL 385
Cdd:cd17357   281 STFI-FENAGfspqlaewANLGI-----GIVNVLSTIVGPFLIEKVGRR---PLLLISLSVCAVALLLMSVFLF-LSEQN 350
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 386 ACLGIGCSAATFSSVAVH---------FI--ELIPTVLRARASG----IDLTASRIGAALAPLLMTLTVFFTTLPWIIYG 450
Cdd:cd17357   351 SWMSYGCIVAIFLFIFFFaiglgpipwFIgaELFPQAPRSAAQSlgssVNWTSNFIVGMAFPPLQSIGGGFVFIIFAIPC 430
                         410
                  ....*....|....*...
gi 1034573555 451 IfpIIGGLIVFLLPETKN 468
Cdd:cd17357   431 A--LFLLYLYRYLPETKG 446
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
94-431 6.11e-19

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 88.11  E-value: 6.11e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  94 SVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWI 173
Cdd:COG2814    48 GLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLCALAPSLWLLLAARFLQGLGAGALFPAALALIADLV 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 174 RPNSKALVVILSSGALSIGQII---LGGLAYVFRDWQTLHVVASVPFFVFFLLSRWLVESARwliitnkldeglkalrkv 250
Cdd:COG2814   128 PPERRGRALGLLGAGLGLGPALgplLGGLLADLFGWRWVFLVNAVLALLALLLLLRLLPESR------------------ 189
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 251 artngiknaeetlnievvrstmqeELDAAQTKTTVCDLFRNPSMRKRICILVFLRFA-----NTIPFYGTMVnLQHVGSN 325
Cdd:COG2814   190 ------------------------PAARARLRGSLRELLRRPRLLLLLLLAFLLGFGffalfTYLPLYLQEV-LGLSASA 244
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 326 IFLLQVLYGAVALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTFVPkEMQTLRVALACLGIGcSAATFSSVAVHFI 405
Cdd:COG2814   245 AGLLLALFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLLLALAG-SLWLLLLALFLLGFG-FGLLFPLLQALVA 322
                         330       340
                  ....*....|....*....|....*.
gi 1034573555 406 ELIPTVLRARASGIDLTASRIGAALA 431
Cdd:COG2814   323 ELAPPEARGRASGLYNSAFFLGGPLA 348
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
98-466 8.88e-19

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 88.13  E-value: 8.88e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  98 FLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNS 177
Cdd:cd17371    41 TVTLAGGAIGGILGGILADRFGRVRVLVITILLFAVFTLLCGFAQNYWQLLILRALAGLGFGGEWAAGAALMAEYVPARH 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 178 KALVVILSSGALSIGQIILGGLAY-VFRD------WQTLHVVASVPFFVFFLLSRWLVESARWLIITNKLDEGLKalrkv 250
Cdd:cd17371   121 RGKALGYVQSGWAVGWLLATLLAAlLFPLlppeiaWRVLFLLGALPALLVLFIRRFVKEPPQWQAARAARRHFAD----- 195
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 251 artngiknaeetlnievvRSTMQEELDAAQTKTT-VCDLFrnpsmrkriCILVFLRFANTIPFYGTMVNLQH---VGSNI 326
Cdd:cd17371   196 ------------------RPSLRELFSPPLLRTTlLASLL---------ATGALGGYYGITTWLPSYLTGERglsFEGSA 248
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 327 FLLQVLYgaVALIVRCLALLTL-NHMGRRISQILFMFLVGLSILANTFVPKEMQTLRVALACLGIgCSAATFSSVAVHFI 405
Cdd:cd17371   249 GYLVVTI--LGGFLGYLAGGFLaDRIGRRNNFALFALGSAISILLYFFLPLSPTLILILGFPLGF-FASGPFSGMGAYLT 325
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1034573555 406 ELIPTVLRARASGIDLTASRIGAALAPllMTLTVFFTTLPW----IIYGIFP-IIGGLIVFLLPET 466
Cdd:cd17371   326 ELFPTAVRATAQGFCYNVGRIIGALFP--FLVGFLATSGSLgtaiAVFAAVYyIAGLVLALLLPET 389
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
73-434 9.23e-18

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 85.10  E-value: 9.23e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  73 SYFPSTIVTKWDLvcDYQSLKSVVQFLLLtGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRF 152
Cdd:TIGR00895  37 GFAAPAISAEWGL--DPVQLGFLFSAGLI-GMAFGALFFGPLADRIGRRRVLLWSILLFSVFTLLCALATNVTQLLILRF 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 153 LAGFSSMIIISNNSLPITEWIRPNSKALVVILSSGALSIGQII---LGGLAYVFRDWQTLHVVASV-PFFVFFLLSRWLV 228
Cdd:TIGR00895 114 LAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVggfLAGWLIPVFGWRSLFYVGGIaPLLLLLLLMRFLP 193
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 229 ESARWLIitnkldegLKALRKVARtngIKNAEETLNIEVVRSTMQEELDAAQTKTTVCDLFRNPSMRKRICILVFLRFAN 308
Cdd:TIGR00895 194 ESIDFLV--------SKRPETVRR---IVNAIAPQMQAEAQSALPEQKSTQGTKRSVFKALFQGKTARITVLLWLLYFML 262
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 309 TIPFYGTmvnlqhvgsNIFLLQVLYGAVALIVRCLALLTLNHMGRRISQILFMFLV---------GLSILANTFVPKEMQ 379
Cdd:TIGR00895 263 LVGVYFL---------TNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLAdrlgprvtaLLLLLGAVFAVLVGS 333
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1034573555 380 TLR------VALACLGIgCSAATFSSVAVHFIELIPTVLRARASGIDLTASRIGAALAPLL 434
Cdd:TIGR00895 334 TLFsptlllLLGAIAGF-FVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPIL 393
MFS_GLUT6_8_Class3_like cd17358
Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major ...
103-471 3.44e-17

Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340916 [Multi-domain]  Cd Length: 436  Bit Score: 83.78  E-value: 3.44e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 103 GMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISnnSLP--ITEWIRPNSKAL 180
Cdd:cd17358    53 GALIGALLSGKLADRIGRKRTLLISAIPCILGWLLIAFAKDVWMLYLGRFLAGFGGGAASV--VVPvyIAEIAPKNVRGA 130
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 181 VVILSSGALSIGqIILGGLAYVFRDWQTLHVVASVPFFVFFLLSRWLVESARWLIITNKLDEGLKALRKvartngIKNAE 260
Cdd:cd17358   131 LGSLNQLLVNIG-ILLGYVLGSFLPWRTLALIGAIPPVVFLILLFFIPESPRWLAKKGREEEAEKSLQF------LRGKD 203
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 261 ETLNIEVVRSTMQEELDAAQTKTTVCDLFRNPSMRKRICILVFLRF------ANTIPFYGTMVnLQHVGSNI--FLLQVL 332
Cdd:cd17358   204 ADISKEAAEIQEELAELEKEAKESSFSDLFQRKYLKPLVIGLGLMLfqqlsgINAVIFYASSI-FDEAGSGLdpNTATII 282
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 333 YGAVALIVRCLALLTLNHMGRRISQI-------LFMFLVGLSILANTFVPKEMQTLRVALACLGIGCSAATFSSVAVHFI 405
Cdd:cd17358   283 IGVVQVVGTLVATLLVDRLGRRPLLLvsaigmgIGLLALGLYFYLQEHGALLSSVSWLPLVGLVIYIISFSIGLGPLPWV 362
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1034573555 406 ---ELIPTVLRARASGIDLTASRIGAalapLLMTLTVFFTTLPWIIYG---IFPIIGGL----IVFLLPETKNLPL 471
Cdd:cd17358   363 imsEIFPAKIKGLAGSLVTLVNWLFA----FIVTKTFPFLTLAWGASGtfwIFAGICGLalvfVLLFVPETKGKSL 434
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
103-464 3.72e-17

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 83.00  E-value: 3.72e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 103 GMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGF-SSMIIISNNSLpITEWIRPNSKALV 181
Cdd:COG2271    57 GYALGQIPAGLLADRFGRRRVLAIGLLLWGLATLLFGFATSFWQLLLLRFLLGLgEAGFFPAALKL-IAEWFPPKERGRA 135
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 182 VILSSGALSIGQII---LGGLAYVFRDWQTLHVVASVPFFVFFLLSRWLvesarwliitnkldeglkalrkvartngikn 258
Cdd:COG2271   136 LGIFNAGGPLGGALappLLGWLLAAFGWRAAFLILGLPGLLLALLRFWL------------------------------- 184
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 259 aeetlnievvrstmqeeldaaqtkttvcdlfrnpsmrkriciLVFLRFANTIPFYGTM-------VNLQHVG-SNIFLLQ 330
Cdd:COG2271   185 ------------------------------------------LALAYFLVYFALYGFLtwlptylVEVRGLSlAQAGLLL 222
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 331 VLYGAVALIVRCLALLTLNHMGRR--ISQILFMFLVGLSILANTFVPkeMQTLRVALACLGIGCSAATFSSVAVHFIELI 408
Cdd:COG2271   223 SLPFLAGIVGSLLGGWLSDRLGRRrkLVLAIGLLLAALALLLLALLP--SPALAIALLFLAGFGLGGAFGLLWALAAELF 300
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1034573555 409 PTVLRARASGIDLTASRIGAALAPLLM--TLTVFFTTLPWIIYGIFPIIGGLIVFLLP 464
Cdd:COG2271   301 PKKARGTASGLVNTFGFLGGALGPLLVgyLLDATGYQAAFLLLAALALLAALLALLLL 358
MFS_SLC22A23 cd17444
Solute carrier family 22, member 23 of the Major Facilitator Superfamily; Solute carrier ...
79-228 1.08e-16

Solute carrier family 22, member 23 of the Major Facilitator Superfamily; Solute carrier family 22, member 23 (SLC22A23) is an orphan member of the SLC22 family of organic cation/anion/zwitterion transporters, which includes organic cation transporters (OCTs/OCTNs) and organic anion transporters (OATs). It is abundantly expressed in brain and is also found in liver. Single-nucleotide polymorphisms in SLC22A23 are associated with inflammatory bowel disease (IBD) in a Canadian white population. SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. SLC22A23 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341002 [Multi-domain]  Cd Length: 364  Bit Score: 81.43  E-value: 1.08e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  79 IVTKWDLVCDYQSLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFS- 157
Cdd:cd17444    24 IVSKWDLVCDSSWKVHIAKFSLLVGLIFGYLITGCLADWFGRRPVLLFSVVFILIFGLTVALSVNVTMFSTLRFFEGFCl 103
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1034573555 158 SMIIISNNSLPItEWIRPNSKALVVILSSGALSIGQIILGGLAYVFRDWQTLHVVASVPFfvFFLLSRWLV 228
Cdd:cd17444   104 AGIILSLYALRI-ELCPPGHRFMITMVASFIAMAGQFLMPGLAALCRDWQVLQAVIICPF--LLMLSYWCI 171
MFS_SLC22A17 cd17445
Solute carrier family 22, member 17 of the Major Facilitator Superfamily; Solute carrier ...
64-464 1.27e-16

Solute carrier family 22, member 17 of the Major Facilitator Superfamily; Solute carrier family 22, member 17 (SLC22A17) is also called 24p3 receptor (24p3R), lipocalin-2 receptor, or neutrophil gelatinase-associated lipocalin (NGAL) receptor (NGALR). It functions as a cell surface receptor for lipocalin-2 (LCN2), also called NGAL or 24p3, which plays a key role in iron homeostasis and transport. LCN2 is a secreted protein of the lipocalin family that induces apoptosis in some types of cells and inhibits bacterial growth by sequestration of the iron-laden bacterial siderophore. Over-expressions of NGAL and NGALR have been found to be correlated with unfavorable clinicopathologic features and poor prognosis of patients with hepatocellular carcinoma. SLC22A17 is a member of the SLC22 family of organic cation/anion/zwitterion transporters, which includes organic cation transporters (OCTs/OCTNs) and organic anion transporters (OATs). It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341003 [Multi-domain]  Cd Length: 346  Bit Score: 80.97  E-value: 1.27e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  64 CVDGWVY-DQSYFPSTIVTKWDLVCDYQSLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAP 142
Cdd:cd17445     8 CDAGWNYtGLPGLTNNIVTEWDLVCSRYWLVPLEQVCFILGFASGYLCLGYTADRLGRRRTLLLSLTLAVPFGVLVAVAA 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 143 TFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVVILSSGALSIGQIILGGLAYVFRDWQTLHVVASVPfFVFFL 222
Cdd:cd17445    88 SPSLFMAMRFLLGAALAGVYLTLYLTRLELCDPPQRLLVAMAGGLTMVGGHFLLLGLALGCGSWRVLQGTITAP-LSLFL 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 223 LSRWlvesarwliitnkldEGLKALRKVARTNGIKNAeetlnIEVVRSTMQEELDAAQTKttvcdlfrnpsmrkricilv 302
Cdd:cd17445   167 CYGC---------------PGVKNLLILGFTTFIAHA-----ISHCYQSFSDDVRGTPST-------------------- 206
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 303 flrfantipFYGTmvnlqhvgsniFLLQVLYGAVALIVRClalLTLNHMGRRISQILFMFLVGL-SILANTFVPKEMQTL 381
Cdd:cd17445   207 ---------FYLS-----------YLLSTGTAGLACLFLC---ATVDRFGRRGILLLAMTLTGIaSLILLGLMDYLNDAA 263
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 382 RVALACLGIGCSAATFSSVAVHFIELIPTVLRARASGIDLTASRIGAALAPLLMTLTVFFTTLPWIIYGIFPIIGGLIVF 461
Cdd:cd17445   264 IKTFSILGLFSSQAAASLSILFAAEVIPTVIRGSGLGLIMALGSLGGLSSPLMRLRNQHGYFLHHVVLASLALLAILSIM 343

                  ...
gi 1034573555 462 LLP 464
Cdd:cd17445   344 LLP 346
MFS_1 pfam07690
Major Facilitator Superfamily;
103-432 1.91e-16

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 80.54  E-value: 1.91e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 103 GMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVV 182
Cdd:pfam07690  44 GYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASSLWLLLVLRVLQGLGAGALFPAALALIADWFPPEERGRAL 123
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 183 ILSSGALSIGQII---LGGLAYVFRDWQTLHVVASVPFFVFFLLsrwlvesaRWLIITNKLDEGLKALRKVARTNGIKNA 259
Cdd:pfam07690 124 GLVSAGFGLGAALgplLGGLLASLFGWRAAFLILAILSLLAAVL--------LLLPRPPPESKRPKPAEEARLSLIVAWK 195
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 260 EetlnievvrstmqeeldaaqtkttvcdlFRNPSMRKRICILVFLRFANTIPFYGTMVNLQHVGSNIFLLQVLYGAVALI 339
Cdd:pfam07690 196 A----------------------------LLRDPVLWLLLALLLFGFAFFGLLTYLPLYQEVLGLSALLAGLLLGLGGLL 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 340 VRCLALLT---LNHMGRRISQILFMFLVGLSILANTFVP--KEMQTLRVALACLGIGcSAATFSSVAVHFIELIPTVLRA 414
Cdd:pfam07690 248 GAIGRLLLgrlSDRLGRRRRLLLALLLLILAALGLLLLSltLSSLWLLLALLLLGFG-FGLVFPALNALVSDLAPKEERG 326
                         330
                  ....*....|....*...
gi 1034573555 415 RASGIDLTASRIGAALAP 432
Cdd:pfam07690 327 TASGLYNTAGSLGGALGP 344
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
91-461 7.09e-16

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 79.01  E-value: 7.09e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  91 SLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPIT 170
Cdd:cd06174    31 SQLGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAFAPSFWLLLLGRFLLGLGSGLIDPAVLALIA 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 171 EWIRPNSKALVVILSSGALSIGQIILGGLA-----YVFRDWQTLHVVASVPFFVFFLLSRWLVESARWLIITNKLDEGLK 245
Cdd:cd06174   111 DLFPERERGRALGLLQAFGSVGGILGPLLGgilasSLGFGWRAVFLIAAALALLAAILLLLVVPDPPESARAKNEEASSK 190
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 246 ALRKVARTngiknaeetlnievvrstmqeeldaaqtkttvcdLFRNPSMRKR--ICILVFLRFANTIPFYGTMVNLQHVG 323
Cdd:cd06174   191 SVLKLLKR----------------------------------VLKNPGLWLLllAIFLVNLAYYSFSTLLPLFLLDLGGL 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 324 SNIFLLQVLYGAVALIVRCLALLT-LNHMGRRISQILFMFLVGLSILANTFVPKEMQTLRVALACLGIGCSAATFSSVAV 402
Cdd:cd06174   237 SVAVAGLLLSLFGLAGALGSLLLGlLSDRLIGRKPLLLIGLLLMALGLALLLLAPSLLLLLLLLLLLGFGLGGLLPLSFA 316
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1034573555 403 HFIELIPTVLRARASGIDLTASRIGAALAPLL---MTLTVFFTTLPWIIYGIFPIIGGLIVF 461
Cdd:cd06174   317 LIAELFPPEIRGTAFGLLNTFGFLGGAIGPLLagfLLAATFGLTGAFLVLAVLLLLAAILLL 378
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
94-467 3.10e-14

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 74.15  E-value: 3.10e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  94 SVVQFLLLTGM--LVGG---IIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGF----SSMIIISN 164
Cdd:COG2223    38 SAAQLGLLFAIpvLVGAllrIPLGFLVDRFGPRRVLLIGLLLLGIGLLLLALAVSYWLLLLLGLLLGIggggSFAVGIAL 117
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 165 nslpITEWIRPNSKALVVILSSGALSIGQII---LGGLAYVFRDWQTLHVVASVPFFVFFLLSRWLvesarwliitnkld 241
Cdd:COG2223   118 ----VSKWFPPDRRGLALGLAAGGGNLGAAVaafLAPLLIAAFGWRNAFLILGILLLVVAVLAWLF-------------- 179
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 242 eglkalrkvartngIKNAEEtlnievvrstmQEELDAAQTKTTVCDLFRNPsmrkRICILVFLRFANTIPFYGTMVNLQH 321
Cdd:COG2223   180 --------------LRDPPA-----------GAAAAAKASLRDQLEALRDP----RFWLLSLLYFGTFGSFIGFSSWLPP 230
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 322 VGSNIF--------LLQVLYGAVALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTFVPKEMQTLRVALACLGIGC- 392
Cdd:COG2223   231 YLVDQFglsaatagLLAALFALLGALGRPLGGWLSDRIGGRRVLLIVFALMALGLLLLALALGSLWLFLVLFLLLGLALg 310
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 393 --SAATFSSVAVHFieliPTVLRARASGIDLTASRIGAALAPLLMTLTVFFT---TLPWIIYGIFPIIGGLIVFLLPETK 467
Cdd:COG2223   311 ggNGAVFALVPDIF----PTKNAGAVYGLVGAAGGLGGFLGPLLFGALLDATgsyTAAFLVFAVLALVALVLTLLLYRRP 386
MFS_SLC22A17_like cd17373
Solute carrier family 22, member 17 and similar proteins of the Major Facilitator Superfamily; ...
79-222 5.70e-14

Solute carrier family 22, member 17 and similar proteins of the Major Facilitator Superfamily; This group is composed of Solute carrier family 22, members 17, 23, and 31. They are members of the SLC22 family of organic cation/anion/zwitterion transporters, which includes organic cation transporters (OCTs/OCTNs) and organic anion transporters (OATs). SLC22A17 functions as a cell surface receptor for lipocalin-2 (LCN2), also called NGAL or 24p3, which plays a key role in iron homeostasis and transport. SLC22A23 and SLC22A31 are orphan members of the SLC22 family. SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22A17-like group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340931 [Multi-domain]  Cd Length: 348  Bit Score: 72.94  E-value: 5.70e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  79 IVTKWDLVCDYQSLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSS 158
Cdd:cd17373    13 AVSKWDLVCDNGWKVHLEQFSLLLGLIFGYLILGCIADRFGRRPVLLFSLILILIFGLTVALAVSVTMFSTLRFLEGFCL 92
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1034573555 159 MIIISNNSLPITEWIRPNSKALVVILSSGALSIGQIILGGLAYVFRDWQTLHVVASVPFFVFFL 222
Cdd:cd17373    93 AGIILTLYLLRLELCDPGKRLMITMVASLVAVAGQFLMPGLAALCRDWRVLQALIICPFLLMLL 156
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
103-463 1.76e-12

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 68.76  E-value: 1.76e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 103 GMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVV 182
Cdd:cd17325    43 AQLLFSPPAGRLSDRFGRKRLLLLGLLLLAVSTLLFAFATSYWQLLLARFLQGLASAAVWPAAMALIADIAPPEERGRAM 122
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 183 ILSSGALSIGQII---LGGLAYVFRDWQTLHVVASVPFFVFFLLSRWLvesarwliitnkldegLKALRKVARTNGIKNA 259
Cdd:cd17325   123 GIFSSAIGLGFLIgplLGGLLADALGYRAPFLVCAALALLALVLALLL----------------LPEPRPPPNKRAVSAA 186
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 260 EETLNIEVVRstmqeeldaaqtkttvcdlfrnpsMRKRICILVFLRFANTIPFYGTMVNL-----QHVGSNIFLLQVLYG 334
Cdd:cd17325   187 RLRSGLRLLL------------------------RDRRLLALFLAIFVLAFAFGALEPFLplyaaELGGLSPAQIGLLFG 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 335 A---VALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTFVPkEMQTLRVALACLGIGCsAATFSSVAVHFIELIPTV 411
Cdd:cd17325   243 AqglASALSQPPAGKLSDRIGRKPLILIGLLLSAVALLLLPLAT-SFWLLLLLLALLGLGL-GLVFPATLALLADIVPPE 320
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1034573555 412 LRARASGIDLTASRIGAALAPLLMTL--TVFFTTLPWIIYGIFPIIGGLIVFLL 463
Cdd:cd17325   321 GRGTAMGLFNTAFSLGMVLGPLLGGFlyDAFGFATPFLAAAALLLLAAVLFLLL 374
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
103-236 9.41e-12

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 65.60  E-value: 9.41e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 103 GMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVV 182
Cdd:COG0477    61 GRAIGLLLFGRLGDRYGRKRVLLIGLLLFGLASLLCGLAPSPELLIAARALQGIGAGGLMPGALALIAELFPARERGRAL 140
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1034573555 183 ILSSGALSIGQII---LGGLAYVFRDWQTLHVVASVPFFVFFLLSRWLVESARWLII 236
Cdd:COG0477   141 GLWGAAIGLGLALgplLGGLLVAALGWRWIFLINAPLGLLALVLRLRLPESRGLLLA 197
MFS_XylE_like cd17359
D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This ...
100-465 8.56e-11

D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340917 [Multi-domain]  Cd Length: 383  Bit Score: 63.36  E-value: 8.56e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 100 LLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKA 179
Cdd:cd17359    45 ALLGAAIGALFAGRLADRFGRRKTLLISAVLFFISALGSAFSPNFTIFIIARIIGGLAVGGASALVPMYIAEVAPAEIRG 124
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 180 LVVILSSGALSIGQII-----------LGGLAYVFRDWQTLHVVASVPFFVFFLLSRWLVESARWLIITNKldeglkalr 248
Cdd:cd17359   125 RLVSLNQLMIVFGQLLayivnylianaGGADWLGAEGWRWMLGLEAIPAILFLLGMLFIPESPRWLVSKGK--------- 195
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 249 kvartngiknaeetlnievvrstmqeeldaaqtkttvcdlfrnPSMRKRICILVFLRF--ANTIPFYGTMVnLQHVG--- 323
Cdd:cd17359   196 -------------------------------------------PILIIGIGLAIFQQFvgINVIFYYGPEI-FQNAGfse 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 324 SNIFLLQVLYGAVALIVRCLALLTLNHMGRR-------ISQILFMFLVGLsILANTFVPKEMQTLRVALACLGIGCSAAT 396
Cdd:cd17359   232 NAALLQTIGIGVVNVIFTIIAILLVDKVGRKpllligsIGMAISLLLIGT-AFYFAPGSQASGIVALVLILLFVAFFAMS 310
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1034573555 397 FSSVA-VHFIELIPTVLRARASGIDLTASRIGAALAPLL--MTLTVFFTTLPWIIYGIFPIIGGLIV-FLLPE 465
Cdd:cd17359   311 WGPVTwVLLSEIFPNRIRGLAMGIAVFFLWIANFLVSLTfpILLAAFGLAFTFLIFAVICVLAFLFVwKFVPE 383
MFS_GLUT8_Class3 cd17433
Glucose transporter type 8, a Class 3 GLUT, of the Major Facilitator Superfamily of ...
103-467 1.08e-10

Glucose transporter type 8, a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 8 (GLUT8) is also called Solute carrier family 2, facilitated glucose transporter member 8 (SLC2A8) or glucose transporter type X1 (GLUTX1). It is classified as a Class 3 GLUT protein and is an insulin-regulated facilitative glucose transporter predominantly expressed in testis and brain. It can also transport fructose and galactose. SLC2A8 knockout mice were viable, developed normally, and display only a very mild phenotype, including mild alterations in the brain (increased proliferation of hippocampal neurons), heart (impaired transmission of electrical wave through the atrium), and sperm cells (reduced number of motile sperm cells). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340991 [Multi-domain]  Cd Length: 416  Bit Score: 63.36  E-value: 1.08e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 103 GMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVV 182
Cdd:cd17433    53 GAAAGGVLGGWIVDRAGRKLSLMLCSVPFIAGFTVITAAQNVWMLYVGRLLTGLASGVTSLVVPVYISEIAHPRVRGTLG 132
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 183 ILSSGALSIGqIILGGLAYVFRDWQTLHVVASVPFFVFFLLSRWLVESARWLIITNKLDEGLKALRkVARTNGIKNAEET 262
Cdd:cd17433   133 SCVQLMVVIG-IMGAYLAGLVLDWRWLAVLGSIPPTLMLLLMCFMPETPRFLLTQHRRQEAMAALR-FLRGPDQGWEWEC 210
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 263 LNIEVVRSTMQEELDAAqtkttvcdLFRNPSMRKRICILVFLRF------ANTIPFYGTMVNLQHVGSNIFLLQVLYGAV 336
Cdd:cd17433   211 IGIEQSFHLEEQSFSLA--------LLKQPGIYKPLIIGVSLMAfqqltgINAVMFYAETIFEEAKFKDSSVASVIVAAI 282
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 337 ALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTFVPKEMQTLRVALACLGIGCSAATFSSvavhfiELIPTVLRARA 416
Cdd:cd17433   283 QVLFTAVAALIMDRAGRKVLLVLSGVVMVFSTAAFGWLAVGSMGFFIAGFAVGWGPIPWLVMS------EIFPLHVRGVA 356
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 417 SGIDLTASRIGAALapllmtLTVFFTTLPWII--YGIFPIIGGLIV-------FLLPETK 467
Cdd:cd17433   357 SGICVLTNWLMAFL------VTKEFSSLMEVLssYGTFWLFSAFCAfsvlftlFCVPETK 410
MFS_SVOP_like cd17372
Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator ...
94-434 8.42e-10

Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator Superfamily; This subfamily is composed of synaptic vesicle 2 (SV2)-related protein (SVOP), SVOP-like protein (SVOPL), and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. Like SV2, SVOP is expressed in all brain regions, with highest levels in cerebellum, hindbrain and pineal gland. Studies with knockout mice suggets that SVOP may perform a subtle function that is not necessary for survival under normal conditions, since mice lacking SVOP are viable, fertile, and phenotypically normal. SVOP and SVOPL share structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. The SVOP-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340930 [Multi-domain]  Cd Length: 367  Bit Score: 60.24  E-value: 8.42e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  94 SVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSsmiiISNNSLPIT--- 170
Cdd:cd17372    37 ALITSVVFAGMMIGSYLWGIVSDKYGRRKGLIISALWTFYAGFLSAFAPNYMWLIILRCLVGLG----LGGGPQLASwyl 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 171 EWIRPNSKALVVILSSGALSIGQIILGGLAYVFR---DWQTLHVVASVPFFVFFLLSRWLVESAR--WLIItnkldeglk 245
Cdd:cd17372   113 EFLPAKSRGTWMVLFSVFWTVGTIFEASLAWLVMprlGWRWLLAFSSVPSSLLLVFYRWTPKTTLllWVIW--------- 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 246 aLRKVARTNGIKNAEETLNIEVVRSTMQEELDAAQTKTTVCDLFRNPSMRKRICILVFLRFAntipfyGTMVNLQHVGsn 325
Cdd:cd17372   184 -FGNAFAYYGVVLLTTELNNSHNVCGSKSDSDSGESPTEKQCRNSNDVDYRDVFIATFAEFP------GLLISAAMID-- 254
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 326 iFLLQVLYGAVALIVRCLALLTLNHMGRRISQILFMFlvglsilantfvpkemqtlrvalacLGIGCSAATFSSVAVHFI 405
Cdd:cd17372   255 -RLGRKASMASMLFTCCIFLLLLLICQSPFILTVLLF-------------------------GGRACISAAFTVVYIYTP 308
                         330       340
                  ....*....|....*....|....*....
gi 1034573555 406 ELIPTVLRARASGIDLTASRIGAALAPLL 434
Cdd:cd17372   309 EVYPTAVRALGVGTGSSVGRIGAILCPFI 337
MFS_GLUT10_12_Class3_like cd17362
Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the ...
100-471 1.37e-09

Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 10, GLUT12, plant polyol transporters (PLTs), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340920 [Multi-domain]  Cd Length: 389  Bit Score: 59.67  E-value: 1.37e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 100 LLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSsmIIISNNSLP--ITEWIRPNS 177
Cdd:cd17362    48 SLLGALLGSLVAGALIDRLGRRKELILAALLYLVGSLVTGLAPSYPVLLVGRLIYGVG--IGLAMHAAPvyIAETSPSHI 125
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 178 KALVVILSSGALSIGqIILGGLA-YVFRD----WQTLHVVASVPFFVFFLLSRWLVESARWliitnkldeglkalrkvar 252
Cdd:cd17362   126 RGLLVSLKELFIVLG-ILLGYVSgYAFADvvggWRYMYGLAAPPALLLGIGMWFLPPSPRW------------------- 185
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 253 tngiknaeetlnievvrstmqeeldaaqtkttvcdlfrNPSMRKRICI---LVFLRFANTIP---FYGTMVnLQHVG--- 323
Cdd:cd17362   186 --------------------------------------QGNYRKPLIIglgLVLFQQITGQPsvlYYAATI-FKSAGfsa 226
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 324 -SNIFLLQVLYGAVALIVRCLALLTLNHMGRR------ISQILFMfLVGLSILaNTFVPKEMQTLR-VALACL--GIGCS 393
Cdd:cd17362   227 aSDATLVSVGLGVFKLLMTIVAVLLVDKLGRRplllggVSGMVVS-LFLLAAY-NLFVQMGPAGLAwLSLVALllYVGAY 304
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 394 AATFSSVAVHFI-ELIPTVLRARASGIDLTASRIGAALAPLLMTLTVFFTTLPWIiYGIFPIIG----GLIVFLLPETKN 468
Cdd:cd17362   305 QISFGPISWLMVsEIFPLRVRGRAIALAVLVNFGSNALVSLAFLPLQELIGLPGT-FLGFGVIGvlalLFIYFTVPETKG 383

                  ...
gi 1034573555 469 LPL 471
Cdd:cd17362   384 LSL 386
MFS_SVOP cd17441
Synaptic vesicle 2-related protein (SVOP) of the Major Facilitator Superfamily; Synaptic ...
82-234 1.54e-09

Synaptic vesicle 2-related protein (SVOP) of the Major Facilitator Superfamily; Synaptic vesicle 2 (SV2)-related protein (SVOP) is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. Like SV2, SVOP is expressed in all brain regions, with highest levels in cerebellum, hindbrain and pineal gland. Studies with knockout mice suggets that SVOP may perform a subtle function that is not necessary for survival under normal conditions, since mice lacking SVOP are viable, fertile, and phenotypically normal. SVOP shares structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. This SVOP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340999 [Multi-domain]  Cd Length: 372  Bit Score: 59.44  E-value: 1.54e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  82 KWDLVCDYQSLKSVVQFLlltGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMII 161
Cdd:cd17441    28 EWRLPSWQVALLTSVVFI---GMMLSSSLWGNISDQYGRKTGLKISVLWTLYYGILSAFAPIYSWILVLRGLVGFGIGGV 104
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1034573555 162 ISNNSLpITEWIRPNSKALVVILSSGALSIG---QIILGGLAYVFRDWQTLHVVASVPFFVFFLLSRWLVESARWL 234
Cdd:cd17441   105 PQSVTL-YAEFLPMKSRAKCILLIEVFWALGtvfEVLLAVFVMPTLGWRWLLILSALPLLIFAVLCFWLPESARYW 179
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
101-225 3.48e-09

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 58.37  E-value: 3.48e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 101 LTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKAL 180
Cdd:cd17365    44 LFGMAIGALLAGPLADRFGRKRVLLVSVALFGLFTLLTAFAQSVLQLALLRFLTGLGLGAAMPNAITLVSEYAPARRRSL 123
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1034573555 181 VVILSSGALSIGQIILGGLAYVFRD---WQTLHVVASVPFFVFFLLSR 225
Cdd:cd17365   124 AVTLMFCGYPLGAALGGFLAAALIPafgWRSVFLLGGVPPLILLPLLR 171
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
103-463 4.09e-09

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 58.33  E-value: 4.09e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 103 GMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVV 182
Cdd:cd17324    46 GYALGALLLGPLSDRIERRRLLLVLLLLFILGNLLAALAPSFALLLLARALAGLAHGGFWAIAAAYAADLVPPEKRGRAI 125
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 183 ILSSGALSIGQII---LGGLAYVFRDWQTLHVVASVPFFVFFLLSRWLvesarwliitnkldegLKALRKVARTNGIKNA 259
Cdd:cd17324   126 GLVFSGLTLGLVLgrpLGGLLGQLLGWRAAFLAIAVLALLAALLLWRL----------------LPSLPPKKPGSLGLLS 189
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 260 EETLnievvrstmqeeldaaqtkttvcdLFRNPSMRkRICILVFLRFANTIPFYGTMV-----NLQHVGSNIFLLQVLYG 334
Cdd:cd17324   190 SLLL------------------------LLRNPRLR-LAYLITFLLFGGFFALYTYLApfltdVPGFSSSAIIGLLLLFG 244
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 335 AVALIVRCLALLTLNHMGRRISqILFMFLVGLSILANTFVPKEMQTLRVALACLGIGcSAATFSSVAVHFIELIPTVlRA 414
Cdd:cd17324   245 VAGVVGSPLAGRLADRGGRRAL-LIALLLLAAALLLLTLLGPSPLLLLVGLVLWGLG-FFAAHSALQTRVLRLAPEA-RG 321
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*....
gi 1034573555 415 RASGIDLTASRIGAALAPLLMTLtvFFTTLPWIiyGIFPIIGGLIVFLL 463
Cdd:cd17324   322 LASSLYLAAYNLGGALGAALGGL--VLDHGGWA--GVGWVGAALLLLAL 366
xylE PRK10077
D-xylose transporter XylE; Provisional
101-489 8.89e-09

D-xylose transporter XylE; Provisional


Pssm-ID: 182225 [Multi-domain]  Cd Length: 479  Bit Score: 57.78  E-value: 8.89e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 101 LTGMLVGGIIGGHVSDRFGRRFILRWC---------------LLQLAITDTCAAFAPTFPVYCVLRFLA-GFSSMIiisn 164
Cdd:PRK10077   65 LIGCIIGGALGGYCSNRFGRRDSLKIAavlffisalgsawpeFGFTSIGPDNTGYVPEFVIYRIIGGIGvGLASML---- 140
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 165 NSLPITEWIRPNSKALVVILSSGALSIGQ---------IILGGLAYVFRD--WQTLHVVASVPFFVFFLLSRWLVESARW 233
Cdd:PRK10077  141 SPMYIAEIAPAHIRGKLVSFNQFAIIFGQlvvyfvnyfIARSGDASWLNTdgWRYMFASEAIPALLFLMLLYFVPETPRY 220
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 234 LIITNKLDEGLKALRKVartNGIKNAEETLniEVVRSTMQEeldaaqTKTTVCDLFRNPSMRKRICIL--VFLRFA--NT 309
Cdd:PRK10077  221 LMSRGKQEQAEGILRKI---MGNTLATQAL--QEIKHSLDH------GRKTGGKLLMFGVGVIVIGVMlsVFQQFVgiNV 289
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 310 IPFYGTMV--NLQHVGSNIFLLQVLYGAVALIVRCLALLTLNHMGRRISQI---LFMfLVGLSILANTFvpkEMQTLRVa 384
Cdd:PRK10077  290 VLYYAPEIfkTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIigaLGM-AIGMFSLGTAF---YTQAPGI- 364
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 385 LACLGIGCSAATFSS-----VAVHFIELIPTVLRARASGIDLTASRIGAALA----PLLMTLTV----FFTTLPWIIYGI 451
Cdd:PRK10077  365 VALLSMLFYVAAFAMswgpvCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVswtfPMMDKNSWlvahFHNGFSYWIYGC 444
                         410       420       430
                  ....*....|....*....|....*....|....*....
gi 1034573555 452 FPIIGGLIVF-LLPETKNlplpDTIKDVENQKKNLKEKA 489
Cdd:PRK10077  445 MGVLAALFMWkFVPETKG----KTLEEMEALWEPETKKT 479
MFS_HMIT_like cd17360
H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; ...
88-465 2.39e-08

H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of myo-inositol/inositol transporters and similar transporters from vertebrates, plant, and fungi. The human protein is called H(+)-myo-inositol cotransporter/Proton myo-inositol cotransporter (HMIT), or H(+)-myo-inositol symporter, or Solute carrier family 2 member 13 (SLC2A13). HMIT is classified as a Class 3 GLUT (glucose transporter) based on sequence similarity with GLUTs, but it does not transport glucose. It specifically transports myo-inositol and is expressed predominantly in the brain, with high expression in the hippocampus, hypothalamus, cerebellum and brainstem. HMIT may be involved in regulating processes that require high levels of myo-inositol or its phosphorylated derivatives, such as membrane recycling, growth cone dynamics, and synaptic vesicle exocytosis. Arabidopsis Inositol transporter 4 (AtINT4) mediates high-affinity H+ symport of myo-inositol across the plasma membrane. The HMIT-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340918 [Multi-domain]  Cd Length: 362  Bit Score: 55.74  E-value: 2.39e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  88 DYQSLKSVVQFLLLT----GMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGF----SSM 159
Cdd:cd17360    28 GEVVLSTGWQELIVSstvaGAAVGAAIGGWLNDRFGRRPCILLADALFTIGAIVMAAAPNKEVLIVGRVLVGLgvgiASM 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 160 IIisnnSLPITEWIRPNSKALVVILSSGALSIGQ----IILGGLAYVFRDWQTLHVVASVPFFVFFLLSRWLVESARWli 235
Cdd:cd17360   108 TV----PLYIAEAAPPRIRGRLVTINVLFITGGQfvayVINGAFSYLPGGWRWMLGLAAVPAVLQFIGLLFLPESPRW-- 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 236 itnkldeglkalrkvartngiknaeetlnievvrstmqeeldaaqtkttvcdlfrnPSMRKRICILVFLRFA------NT 309
Cdd:cd17360   182 --------------------------------------------------------PSTRRALIVGCGLQAFqqfsgiNT 205
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 310 IPFY-GTMVNLQHVGSNIF--LLQVLYGAVALIVRCLALLTLNHMGRRISQILFMF--LVGLSILAnTFVPKEMQTLRVA 384
Cdd:cd17360   206 VMYYsATILQMAGFKDNQNaiWLSLIVAGTNFIFTIVGMYLIDKFGRRKLLLISLFgvIVALVVLA-VWLALVGLILYLA 284
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 385 LACLGIGCSAATFSSvavhfiELIPTVLRARASGIDLTASRIGAAL-APLLMTLTVFFTTlpwiiYGIFPIIGGL----- 458
Cdd:cd17360   285 FFAPGMGPVPWTVNS------EIYPLWARGTGGGCAAAVNWVFNLLvSQTFLTLTQAIGP-----YGTFLLFAGLavlgl 353

                  ....*....
gi 1034573555 459 --IVFLLPE 465
Cdd:cd17360   354 ifIYFCVPE 362
MFS_GLUT_like cd17315
Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator ...
91-230 6.91e-08

Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily; This family is composed of glucose transporters (GLUTs) and other sugar transporters including fungal hexose transporters (HXT), bacterial xylose transporter (XylE), plant sugar transport proteins (STP) and polyol transporters (PLT), H(+)-myo-inositol cotransporter (HMIT), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. The GLUT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340873 [Multi-domain]  Cd Length: 365  Bit Score: 54.50  E-value: 6.91e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  91 SLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPIT 170
Cdd:cd17315    34 SLQGLVVSSLLLGAAIGSLFGGPLADRFGRRKSLLIAAVLYVIGALLSALAPNVWVLIVGRFLLGLGVGLASVLVPLYIS 113
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1034573555 171 EWIRPNSKALVVILSSGALSIGQII-----LGGLAYVFRDWQTLHVVASVPFFVFFLLSRWLVES 230
Cdd:cd17315   114 EIAPAKIRGALGTLNQLMITFGILLayllgLALSLSPPGWWRLMFALAAVPALLQLLLMFFLPES 178
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
103-238 8.64e-08

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 54.12  E-value: 8.64e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 103 GMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLpITEWIRPNSKALVV 182
Cdd:cd17330    46 GQFLASPLWGRLSDRYGRKPVLLLSLAGSAVSYVLLGLSRNLWLLFLARFLDGLTGGNVSVAQAY-IADITDEEERAKAF 124
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1034573555 183 ILSSGALSIGQII---LGGLAYVFRDWQTLHVVASVPFFVFFLLSRWLVESARWLIITN 238
Cdd:cd17330   125 GIISAAFGLGFILgpaLGGFLSTPYGYALPFLVAAALALLNLVLVLFFLPPLRRLLLVY 183
MFS_SV2 cd17363
Synaptic vesicle glycoprotein 2 of the Major Facilitator Superfamily of transporters; Synaptic ...
86-467 8.74e-08

Synaptic vesicle glycoprotein 2 of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. The SV2 family belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340921 [Multi-domain]  Cd Length: 474  Bit Score: 54.42  E-value: 8.74e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  86 VCDYQSLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSmiiisNN 165
Cdd:cd17363    29 MCLSNSNKGMLGLIVYLGMMVGAFVWGGLADKLGRKQCLLIALSVNGVFAFLSSFVQGYGFFLFCRLLSGIGI-----GG 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 166 SLPI-----TEWIRPNSKA-----LVVILSSGALSIGQIILG-----------GLAYVFRDWQTLHVVASVPFFVFFLLS 224
Cdd:cd17363   104 SIPIvfsyfAEFLAREKRGehlswLCMFWMIGGLYASAMAWAiiphygwgfsmGTAYQFHSWRVFVIVCALPSVASVVAL 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 225 RWLVESARWLIITNKLDEGLKALRKVARTN-GIKNAEE------------TLNIEVVRSTMQ-----------EELDAAQ 280
Cdd:cd17363   184 TFMPESPRFLLEVGKHDEAWMILKQVHDTNmRAKGHPErvftvshikrmnTLFLAIVWFTMSfsyygltvwfpDMIKYLQ 263
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 281 TKTTVCD------------LFRNpsmrkriCILVFLRFANTIPFYGTMVNLQHVGSNIFLLQ------VLYGAVALIVRC 342
Cdd:cd17363   264 FEDSLFEecyfedvtstntFFEN-------CTFINTVFYNTDLFEYKFIDSRFLNSTFFLKEkcgchlNDDEENAYLIYL 336
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 343 LALL-TLNHMGRRISQILFMFLVG-LSILANTFVPKEM----------QTLRVALACLGIGCSAATFSSVAVHFIELIPT 410
Cdd:cd17363   337 VSFLgSLSVLPGNIVSALLMDKIGrLKMIGGSMLLSAVccfflffgnsESAMIGLQCLFCGVSIAAWNALDVVTVELYPT 416
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1034573555 411 VLRARASGIDLTASRIGAALAPLLMTLTVFFT-TLPWIIYGIFPIIGGLIVFLLPETK 467
Cdd:cd17363   417 DKRATAFGFLNGLCKLAAILGNSIFGSFVGITkVIPILLASAALVCGGLLALKLPETR 474
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
103-463 1.12e-07

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 53.77  E-value: 1.12e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 103 GMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGF-SSMIIISNNSLpITEWIRPNSKALV 181
Cdd:cd17329    47 AGIVASLIGGRLADRFGRKPVMLAGLLLRALGFALLGFAHSPWLFAIALVLTGFgGGLFEPASEAM-IADVTTPENRTRA 125
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 182 VILSSGALSIGQII---LGGLAYVFrDWQTLHVVASVPFFVFFLLSRWLVESARWLIITNKLDEGLKALRKVARtngikn 258
Cdd:cd17329   126 FSLLYWAINLGVAIgplLGGLLLLY-SFRLLFLAAAVLFLLAALVLLFLLPETRPKRRAAEKTEILRGYKIVLR------ 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 259 aeetlnievvrstmqeelDAAQTKTTVCDLfrnpsmrkrICILVFLRFANTIPFYgtMVNLQHVGSniFLLQVLYGAVAL 338
Cdd:cd17329   199 ------------------DRAFLLFLLASF---------LISLIYFQLESTLPVY--VVEILGLGE--SLLGLLLALNAL 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 339 IVRCLALLTL---NHMGRRISQILFMFLVGLSILAnTFVPKEMQTLRVALACLGIGcSAATFSSVAVHFIELIPTVLRAR 415
Cdd:cd17329   248 LIVLLQFPVArlvERFRLRKILMIGILLFAIGFAV-LAFANTLAVLILAMIVLTLG-EMLVFPAVQTLVAALAPPDKRGS 325
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 1034573555 416 ASGIDLTASRIGAALAPLL--MTLTVFFTTLPWIIYGIFPIIGGLIVFLL 463
Cdd:cd17329   326 YMGFYALAWGLGRAIGPLVggLLLDLLGPGLPWLILAALGLIAAALLLGL 375
MFS_ShiA_like cd17369
Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This ...
106-462 1.30e-07

Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340927 [Multi-domain]  Cd Length: 408  Bit Score: 53.68  E-value: 1.30e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 106 VGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTF-------PVY-CVLRFLAGFSSMIIISNNSLPITEWIRPNS 177
Cdd:cd17369    59 LGGVVFGHFGDRIGRKKTLVLTLLLMGIATFLIGLLPTYaqigilaPILlVLLRLLQGLALGGEWGGAVLMAVEHAPPKR 138
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 178 KALV-----------VILSSGALSIGQIILGG---LAYVFRdwqtlhvvasVPFfvffLLSRWLVESArwLIITNKLDEG 243
Cdd:cd17369   139 RGFYgsfpqlgapvgLLLATGVFLLLSALLSDeafLSWGWR----------IPF----LLSAVLVAVG--LYIRLRLEET 202
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 244 lkalrkvartngiknaeetlniEVVRSTMQEEldaAQTKTTVCDLFRnpSMRKRICILVFLRFANTIPFY-------GTM 316
Cdd:cd17369   203 ----------------------PVFRRAKEAG---QVVRAPLVEVLR--RHWRALLLAIGLRLAENVLFYlfttfalSYA 255
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 317 VNLQHVGSNIFLLQVLYGAV--ALIVRCLALLTlNHMGRR-------ISQILFMFLVGLSILANTFVPkemqTLRVALAC 387
Cdd:cd17369   256 TQTLGVDRSTVLLAVLIASVvaAITIPLFGWLS-DRVGRRpvylagaLLAALFAFPFFWLLDTGSTWL----IVLAAVVV 330
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1034573555 388 LGIGcSAATFSSVAVHFIELIPTvlRARASGIDLT---ASRIGAALAPLLMTLTVFFTTLPWIIyGIFPIIGGLIVFL 462
Cdd:cd17369   331 LGVL-HGMMYGPQAAFLAELFPT--RVRYTGASLGyqlGAILGGGFAPLIATALVAATGSWWPV-ALYLAALAVISLV 404
MFS_SV2B cd17438
Synaptic vesicle glycoprotein 2B of the Major Facilitator Superfamily of transporters; ...
86-467 4.35e-07

Synaptic vesicle glycoprotein 2B of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. SV2B is a key modulator of amyloid toxicity at the synaptic site and also has an essential role in the formation and maintenance of the glomerular capillary wall. SV2B belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340996 [Multi-domain]  Cd Length: 477  Bit Score: 52.23  E-value: 4.35e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  86 VCDYQSLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSmiiisNN 165
Cdd:cd17438    29 MCLSSSNKGMLGLIVYLGMMAGAFIWGGLADKLGRKRCLIISLAINASFAFLSSFVQGYGAFLFCRLISGFGI-----GG 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 166 SLPI-----TEWIRPNSKA-----LVVILSSGALSIGQIILG-----------GLAYVFRDWQTLHVVASVPFFVFFLLS 224
Cdd:cd17438   104 SLPIvfayfSEFLAREKRGehlswLCMFWMIGGLYASAMAWSiiphygwgfsmGTNYHFHSWRVFVIICALPCIASIIAL 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 225 RWLVESARWLIITNKLDEGLKALRKVARTN--------------GIKNaEETLNIEVVRSTMQ-----------EELDAA 279
Cdd:cd17438   184 KFMPESPRFLLEMGKHDEAWMILKNIHDTNmrakgtpekvftvsNIKR-KNTLFLAVVWFTMAfsyygltvwfpDMIRYL 262
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 280 QTKTTVCDLFRNPSMRKRI---------CILVFLRFANTIPFYGTMVNLQHVGSN-------------------IFLLQV 331
Cdd:cd17438   263 QKHVTFEDSLFDECYFEDVtstdtyfknCTIESTIFYNTDLYEHKFIDCRFINSTfleqkegchmdfeedndflIYLVSF 342
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 332 LYGAVALIVRCLALLTLNHMGR--------RISQILFMFLvglsILANTfvpkemQTLRVALACLGIGCSAATFSSVAVH 403
Cdd:cd17438   343 LGSLSVLPGNIISALLMDKIGRikmiggsmLISAVCCFFL----FFGNS------ESAMIGWQCLFCGTSIAAWNALDVI 412
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1034573555 404 FIELIPTVLRARASGIDLTASRIGAALAPLLMTLTVFFT-TLPWIIYGIFPIIGGLIVFLLPETK 467
Cdd:cd17438   413 TVELYPTNKRATAFGILNGLCKFAAILGNSIFASFVGITkVIPILLASTALVGGGLISLRLPETR 477
MFS_GLUT_Class1 cd17431
Class 1 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called ...
70-367 5.06e-07

Class 1 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-4 are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT1, also called solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1), displays broad substrate specificity and can transport a wide range of pentoses and hexoses including glucose, galactose, mannose, and glucosamine. It is found in the brain, erythrocytes, and in many fetal tissues. GLUT2 (or SLC2A2) is found in the liver, islet of Langerhans, intestine, and kidney, and is the isoform that likely mediates the bidirectional transfer of glucose across the plasma membrane of hepatocytes and is responsible for uptake of glucose by beta cells. GLUT3 (or SLC2A3) is found in the brain and can mediates the uptake of glucose, 2-deoxyglucose, galactose, mannose, xylose and fucose, and dehydroascorbate. GLUT4 (or SLC2A4) is an insulin-regulated facilitative glucose transporter found in adipose tissues, and in skeletal and cardiac muscle. GLUT14 (or SLC2A14) is an orphan transporter expressed mainly in the testis. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340989 [Multi-domain]  Cd Length: 445  Bit Score: 51.95  E-value: 5.06e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  70 YDQSYFPSTIVTKWDLvcdyqslkSVVQFLLltGMLVGGIIGGHVSDRFGRRFILRWCLLqLAITDTC----AAFAPTFP 145
Cdd:cd17431    39 YGEPISPETLTTLWSL--------SVAIFSV--GGMIGSFSVGLFVNRFGRRNSMLYNNL-LAFAGAAlmglSKLAKSYE 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 146 VYCVLRFLAGFSSMIIISNNSLPITEwIRPNS---------KALVVIlssgALSIGQIIlgGLAYVFRD---WQTLHVVA 213
Cdd:cd17431   108 MLILGRFIIGLYCGLTTGLVPMYIGE-ISPTAlrgalgtlhQLGIVV----GILISQIF--GLEFILGTeelWPLLLGFT 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 214 SVPFFVFFLLSRWLVESARWLIItnKLDEGLKALRKVARTNGIKNAEETLNievvrsTMQEELDAA--QTKTTVCDLFRN 291
Cdd:cd17431   181 IVPAILQLALLPFCPESPRYLLI--NRNEEEEAKSVLKKLRGTTDVSEDIQ------EMKEESRQMmrEKKVTILELFRS 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 292 PSMRKRICILVFLRFA------NTIPFYGTMVNLQHVGSNIFLLQVLYGAVALIVRCLALLTLNHMGRRIsqilfMFLVG 365
Cdd:cd17431   253 SSYRQPIIIAIVLQLSqqlsgiNAVFYYSTSIFEKAGVQQPVYATIGAGVVNTIFTVVSLFLVERAGRRT-----LHLIG 327

                  ..
gi 1034573555 366 LS 367
Cdd:cd17431   328 LG 329
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
103-228 1.68e-06

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 50.27  E-value: 1.68e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 103 GMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGF-SSMIIISNNSLpITEWIRPNSKALV 181
Cdd:cd17325   247 ASALSQPPAGKLSDRIGRKPLILIGLLLSAVALLLLPLATSFWLLLLLLALLGLgLGLVFPATLAL-LADIVPPEGRGTA 325
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1034573555 182 VILSSGALSIGQII---LGGLAYVFRDWQTLHVVASVPFFVFFLLSRWLV 228
Cdd:cd17325   326 MGLFNTAFSLGMVLgplLGGFLYDAFGFATPFLAAAALLLLAAVLFLLLR 375
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
103-227 2.46e-06

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 49.54  E-value: 2.46e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 103 GMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMII-ISNNSL---PITEWIRPNSK 178
Cdd:cd06173   256 GALLGALLLGRLSKRRRRGRLLLIGALLLGLALLVLGLSPSLWLLLAALFLLGLAGGLFnVPLNTLlqlRVPDELRGRVF 335
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1034573555 179 ALVVILSSGALSIGQIILGGLAYVFrDWQTLHVVASVPFFVFFLLSRWL 227
Cdd:cd06173   336 SVYNALNSGAMPLGALLAGLLADAL-GLSAVFLLAGALLLLAALLLLLL 383
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
104-463 3.81e-06

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 49.11  E-value: 3.81e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 104 MLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVVI 183
Cdd:cd17474    47 AAVLMPVAGVLADRFGRKKVLLPGLLLFGIGGLLCGLSDSFALLLAGRALQGIGAAGLGPLALTLIGDLFEGGERAKAMG 126
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 184 LSSGALSIGQI---ILGG-LAYVfrDWQtlhvvasVPFFVFFLLSrwLVESARWLIITNKLDEGLKALRKVARTNGIKna 259
Cdd:cd17474   127 LYEAALGLGIAvgpLLGGlLAAI--SWR-------YPFFLLAALI--PVAFLAILFLLPEPKEKAKSSSATKLRDLKK-- 193
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 260 eetlnievvrstmqeeldaaqtkttvcdLFRNPSMRK---RICILVFLRFA--NTIPFY---GTMVNLQHVGSNIFLLQV 331
Cdd:cd17474   194 ----------------------------ALRGRGLLTflvSAFLYFFLYFAflTYLPFLlelLYGISPIIIGLLFAGWSV 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 332 LYGAVALIVRclALLTLNHMGRRISQILFMFLVGLSILANTFVPKEMQTLRVALACLGIGCSAATFSSVAvhfIELIPTV 411
Cdd:cd17474   246 LLALGSLFVG--RLLKKRFGARRILVIGLLLYALSLLLLGFVPSLALLLIAIVLFGLGLGLNLPLLTTLV---TELAPEE 320
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1034573555 412 LRARASGIDLTASRIGAALAPLLMTLTVFFTTLPWIIYGIFPIIGGLIVFLL 463
Cdd:cd17474   321 ERGTASSLYNFVRFLGQAVGPLLFGLLLEIFGLSAPFLVGAAIALAAAVLLA 372
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
94-463 6.82e-06

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 48.34  E-value: 6.82e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  94 SVVQFLL---LTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSS---MII---ISN 164
Cdd:cd17320    34 SAVQLTLsayLLGFALGQLLYGPLSDRFGRRPVLLAGLLLFILASLLCALASSIEQLLIARFLQGLGAaagSVVaraIVR 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 165 NSLPITEWIRPNSKALVVILSSGALSigqIILGGLAYVFRDWQTLHVV-ASVPFFVFFLLSRWLVEsarwliiTNKLDEG 243
Cdd:cd17320   114 DLYSGAELAKIFSLLMMILAIAPALA---PLLGGLLLLFFGWRAIFVFlALLGLLLLLLVLLFLPE-------TLPEEKR 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 244 LKALRKVARTNGIknaeetlnievvrstmqeeldaaqtkttvcdLFRNPSMRKRI-----CILVFLRFANTIPFygTMVN 318
Cdd:cd17320   184 KPLLSSLLRAYKR-------------------------------VLKNRRFLGYAlalglSFAGLFAYLAAAPF--IYIE 230
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 319 LQHVGSNIFLLQVLYGAVALIVRCLA---LLTLNHMGRRISQILFMFLVGLSILANTFVPKEMQ----TLRVALACLGIG 391
Cdd:cd17320   231 QLGLSPAQFGLLFALNAIALILGSLLngrLVRRFGPRRLLRLGLLLLLAAALVLLLAALLGGLSlwplVAPLFLIFFGFG 310
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1034573555 392 CSAATFSSVAVHFIELIptvlRARASGIDLTASRIGAALAPLLMTLTVFFTTLP-WIIYGIFPIIGGLIVFLL 463
Cdd:cd17320   311 LIFPNATSLALEPFPHV----AGTASALLGFLQFLIGALAGALVGLLPNGTALPmGLLILVLGLLALLLLILL 379
2_A_01_02 TIGR00880
Multidrug resistance protein;
103-230 8.17e-06

Multidrug resistance protein;


Pssm-ID: 273318 [Multi-domain]  Cd Length: 141  Bit Score: 45.33  E-value: 8.17e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 103 GMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVV 182
Cdd:TIGR00880  10 GQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVAL 89
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1034573555 183 ILSSGALSIGQII---LGGLAYVFRDWQ-TLHVVASVPFFVFFLLSRWLVES 230
Cdd:TIGR00880  90 GLMSAGIALGPLLgppLGGVLAQFLGWRaPFLFLAILALAAFILLAFLLPET 141
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
99-464 8.57e-06

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 47.95  E-value: 8.57e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  99 LLLT----GMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIR 174
Cdd:cd17473    39 LLLTlpalFIALFAPLAGWLADRFGRKRLLIAGLLLYGIGGVAGLFLDSLYALLASRALLGIGVAGIMTLATALIGDYFE 118
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 175 PNSKALVVILSSGALSIGQIIL----GGLAYVfrDWQTLHVVASVPFFVFFLLSRWLVESArwliitnkldeglkalRKV 250
Cdd:cd17473   119 GEERAKMLGLQSAAMSLGGVVFlllgGALAEI--GWRAPFLVYLLALPVLILVLLFLPEPA----------------RKS 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 251 ARTNGIKNAEETlnievvrstmqeeldaaqtkttvcdlfrnPSMRKRICILVFLRFANTIPFYGTMVN----LQHVGSNI 326
Cdd:cd17473   181 KSAASPGAATAA-----------------------------ALPWKRVLPIYFLAFLAMLLFYVIPIQlpflLQERGGGS 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 327 FLLQVLYGAVALIVRCLALLTLNHMGRRISQILFMFL------VGLSILAntfVPKEMQTLRVALACLGIGCSAAtFSSV 400
Cdd:cd17473   232 AALIGLALAIASLAGAIGALLFGRLKRRLGKRRLLAIgfalmaLGFLLLA---LASGLWVVLLGAILAGLGFGLL-LPTL 307
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1034573555 401 AVHFIELIPTVLRARASGIDLTASRIGAALAPLLMTL---TVFFTTLPWIIYGIFPIIGGLIVFLLP 464
Cdd:cd17473   308 NSWAMSLVPPELRGRAMGIVTSAFFLGQFLSPLVLGPlvnLTGGLSGAFLILGVLALVLAIVLLLLR 374
MFS_Tpo1_MDR_like cd17323
Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of ...
99-224 2.32e-05

Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of fungal multidrug resistance (MDR) transporters including several proteins from Saccharomyces cerevisiae such as polyamine transporters 1-4 (Tpo1-4), quinidine resistance proteins 1-3 (Qdr1-3), dityrosine transporter 1 (Dtr1), fluconazole resistance protein 1 (Flr1), and protein HOL1. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, Flr1 confers resistance to the azole derivative fluconazole while Tpo1 confers resistance and adaptation to quinidine and ketoconazole. The polyamine transporters are involved in the detoxification of excess polyamines in the cytoplasm. Tpo1-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340881 [Multi-domain]  Cd Length: 376  Bit Score: 46.41  E-value: 2.32e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  99 LLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSK 178
Cdd:cd17323    42 LFVLGFGLGPLIWAPLSELYGRRPVYLVSLFIFVIFQIGCALAPNIAMLIILRFLQGFFGSSPLAIGAGTIADLFTPEER 121
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1034573555 179 ALVVILSSGALSIGQI---ILGGLAYVFRDWQTLHVVASVPFFVFFLLS 224
Cdd:cd17323   122 GKAMGVYSLGPLLGPAlgpIIGGFITQSLGWRWIFWFLAIISGFCLILI 170
MFS_GLUT6_Class3 cd17434
Glucose transporter type 6, a Class 3 GLUT, of the Major Facilitator Superfamily of ...
103-467 2.88e-05

Glucose transporter type 6, a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 6 (GLUT6) is also called Solute carrier family 2, facilitated glucose transporter member 6 (SLC2A6). It is classified as a Class 3 GLUT protein, and is a facilitative glucose transporter that binds cytochalasin B with low affinity. It is found in the brain, spleen, and leucocytes. GLUT6 may function in oxalate secretion. SLC2A6 has been identified as an oxalate nephrolithiasis gene in mice; its deletion causes spontaneous calcium oxalate nephrolithiasis in the setting of hyperoxalaemia, hyperoxaluria, and nephrocalcinosis. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340992 [Multi-domain]  Cd Length: 417  Bit Score: 46.36  E-value: 2.88e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 103 GMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVV 182
Cdd:cd17434    53 GAAAGGLSAMFLNDRLGRKLSIMFSAVPSALGYLLMGSAQGIWMLLLGRFLTGFAGGITAASIPVYVSEISHPGVRGALG 132
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 183 ILSSGALSIGQIILGGLAYVFrDWQTLHVVASVPFFVFFLLSRWLVESARWLIITNKLDEGLKALRKVARTNGIKNAEet 262
Cdd:cd17434   133 ACPQIMAVFGSLALYALGLLL-PWRWLAVAGEVPVVIMILLLCFMPNSPRFLISKGKDEKALKALAWLRGPNTDYMTE-- 209
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 263 lnIEVVRSTMQEeldaaQTKTTVCDLFRNPSMRKRICILVFLRFANTIP-FYGTMVNLQHVGSNIFLL------QVLYGA 335
Cdd:cd17434   210 --FEQIKDNIRK-----QSSRLSWAELKTPSYYKPILIAVVMRFLQQLTgITPILVYLEPIFHLTAVIlepkydAALVGA 282
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 336 VALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTFVPKEMQTLRVALACLGIGCSAATFSSvavhfiELIPTVLRAR 415
Cdd:cd17434   283 VRLLSVAIAASLMDKAGRKILLFTSAFLMFAANLSMGLIPLIAAMLFIMGYAMGWGPITWLLMS------EILPLKARGV 356
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1034573555 416 ASGIDLTASRIGA-ALAPLLMTLTVFFT-TLPWIIYGIfpIIGGLIVF---LLPETK 467
Cdd:cd17434   357 ASGLCVVVSWITAfVLTQLFLPVVVTFGlQVPFLFFAA--VCAVSIIFtacCVPETK 411
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
94-200 3.63e-05

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 46.01  E-value: 3.63e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  94 SVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYcVLRFLAGF------SSMIIISNNsl 167
Cdd:cd17478   233 GLLLSLFLFAGAIGTLIGGPLSDRFGRRRVIIASLLLAAPFLLLFLLTPGIWSY-ILLVLAGFllfasfPVTVVLAQE-- 309
                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1034573555 168 pitewIRPNSKA----LVVILSSGALSIGQIILGGLA 200
Cdd:cd17478   310 -----LLPGNVGlasgLMMGLSFGLGGIGAPVLGALA 341
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
99-463 3.67e-05

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 46.02  E-value: 3.67e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  99 LLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSsmIIISNNSLP--ITEWIrPN 176
Cdd:COG2807    61 LPLLAFGLFAPLAPRLARRFGLERTLLLALLLLAAGLLLRSLAPSVALLLAGTALIGAG--IAVGNVLLPglIKRWF-PD 137
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 177 SKALVVILSSGALSIGQIILGGLAYVFRD---WQTLHVVASVPFFVFFLLsrwlvesarWLIItnkldeglkALRKVART 253
Cdd:COG2807   138 RVGLMTGLYTAAMGLGAALAAGLTVPLAAalgWRGALAVWALLALLALLL---------WLPL---------LRRRPAAA 199
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 254 NgiknaeetlnievvrstmqeeldAAQTKTTVCDLFRNPsmrkRICILVFLRFANTIPFYGTMVNL-----------QHV 322
Cdd:COG2807   200 A-----------------------AAPAAASLRSLWRSP----LAWLLTLFFGLQSLLYYAVVAWLppilrdaglsaATA 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 323 GSNIFLLQVLYGAVALIVRCLAlltlNHMG-RRISQILFMFLVGLSILANTFVPkeMQTLRVALACLGIGCsAATFSSVA 401
Cdd:COG2807   253 GLLLSLFQLAGIPGSLLVPLLA----DRLGdRRPLLLLLGLLGLAGLLGLLLAP--GSLPWLWAVLLGLGQ-GGLFPLAL 325
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1034573555 402 VHFIELIPTVLR-ARASGIDLTASRIGAALAPLLMTLTVFFT---TLPWIIYGIFPIIGGLIVFLL 463
Cdd:COG2807   326 TLIGLRARTPAEaAALSGMAQSVGYLLAALGPLLVGALHDATgswTAALLLLAALAVLMLVAGLLA 391
PRK11551 PRK11551
putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
103-234 4.13e-05

putative 3-hydroxyphenylpropionic transporter MhpT; Provisional


Pssm-ID: 236927 [Multi-domain]  Cd Length: 406  Bit Score: 45.72  E-value: 4.13e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 103 GMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFS------SMIIISNNSLPitewirPN 176
Cdd:PRK11551   62 GLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGlggalpNLIALTSEAVG------PR 135
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1034573555 177 SKALVVILSSGALSIGQII---LGGLAYVFRDWQTLHVVASV-PFFVFFLLSRWLVESARWL 234
Cdd:PRK11551  136 LRGTAVSLMYCGVPFGGALasvIGVLAAGDAAWRHIFYVGGVgPLLLVPLLMRWLPESRAFA 197
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
94-223 5.20e-05

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 45.62  E-value: 5.20e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  94 SVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFL--AGFSSMIIISNNSLPITE 171
Cdd:COG0738    46 GLLLFAFFLGYLLASLPAGRLIDRFGYKRGLLLGLLLMALGLLLFALAPSYPLLLLALFLlgLGLGLLDVAANPYVAALG 125
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1034573555 172 wirPNSKALVVILSSGALSIGQIILGGLAYVF------RDWQTLHVVASVPFFVFFLL 223
Cdd:COG0738   126 ---PETAASRLNLLHAFFSLGALLGPLLGGLLillglsLSWHLPYLILAVLLLLLALL 180
PRK03893 PRK03893
putative sialic acid transporter; Provisional
337-470 5.56e-05

putative sialic acid transporter; Provisional


Pssm-ID: 179668 [Multi-domain]  Cd Length: 496  Bit Score: 45.46  E-value: 5.56e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 337 ALIVRCLALLTLNHM----GRRISQILFMFLVGLSILANTFVPKEMqTLRVALACLGIGCsAATFSSVAVHFIELIPTVL 412
Cdd:PRK03893   64 AFISRWFGGLLLGAMgdryGRRLAMVISIVLFSVGTLACGFAPGYW-TLFIARLVIGMGM-AGEYGSSATYVIESWPKHL 141
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1034573555 413 RARASGIDLTASRIGAALAPLLMTLTVFFTTLPWIIY-GIFPIIgglivFLLPETKNLP 470
Cdd:PRK03893  142 RNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFiGILPII-----FALWLRKNLP 195
MFS_MMR_MDR_like cd17321
Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance ...
98-225 7.54e-05

Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340879 [Multi-domain]  Cd Length: 370  Bit Score: 44.86  E-value: 7.54e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  98 FLLLTGMLVggIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNS 177
Cdd:cd17321    40 YLLAFAALL--LLAGRLGDRFGRKRVFLIGLALFGLASLLCALAPSLAFLIAARALQGIGAAAIMPASLALIAATFPGER 117
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1034573555 178 KALVV----ILSSGALSIGQIILGGLAYVFrDWQTLHVVaSVPF-FVFFLLSR 225
Cdd:cd17321   118 RGRALglwgAVVGIGAALGPLLGGLLLELF-GWRWIFLI-NVPIgLVALLLAR 168
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
94-463 9.03e-05

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 44.53  E-value: 9.03e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  94 SVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTF------PVYCVLRFLAGFSSMIIISNNSL 167
Cdd:cd06173    37 GLVLAAFFLPFLLFSPFAGVLADRFDRRRLLILADLLRALLAAVLALLALLgslslwLLLVLAFLLGIASAFFGPARQAL 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 168 pITEWIRPNSKALVVILSSGALSIGQII---LGGLAYVFRDWQTLHVVASVPFFVFFLLSRWLvesarwliitnkldegl 244
Cdd:cd06173   117 -LPELVPKEQLVRANALNSLATQLARIIgpaLGGLLVALLGPGGAFAINALSFLLSALLLLFI----------------- 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 245 kalrkVARTNGIKNAEETLNIEVVRSTMQEeldaaqtkttvcdLFRNPSMRKRICILVFLRFANT-----IPFYGTMVnl 319
Cdd:cd06173   179 -----RRPPPAAPGESSSLLLRDLREGLRY-------------LRRSPLLRLLLLALALFALLGGaltvlLPLLAKEV-- 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 320 QHVGSNIF-LLQVLYGAVALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTFVPkemQTLRVALACLGIGCSAATFS 398
Cdd:cd06173   239 LGGGAAGYgLLLAAFGVGALLGALLLGRLSKRRRRGRLLLIGALLLGLALLVLGLSP---SLWLLLAALFLLGLAGGLFN 315
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1034573555 399 SVAVHFI-ELIPTVLRARASGIDLTASRIGAALAPLLMTLTVFFTTLPWIIY--GIFPIIGGLIVFLL 463
Cdd:cd06173   316 VPLNTLLqLRVPDELRGRVFSVYNALNSGAMPLGALLAGLLADALGLSAVFLlaGALLLLAALLLLLL 383
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
298-463 1.05e-04

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 44.34  E-value: 1.05e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 298 ICILVFLRFANTIPFYGTMVNLQHVG----SNIFLLQVLYGAVALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTF 373
Cdd:cd06174     1 LLLGFFLTGLARGLISPLLPALLQSFglsaSQLGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 374 VPkEMQTLRVALACLGIGCSAATFSSVAVhFIELIPTVLRARASGIDLTASRIGAALAPLLMTLTVFFTTLPWIIYGIFP 453
Cdd:cd06174    81 AP-SFWLLLLGRFLLGLGSGLIDPAVLAL-IADLFPERERGRALGLLQAFGSVGGILGPLLGGILASSLGFGWRAVFLIA 158
                         170
                  ....*....|
gi 1034573555 454 IIGGLIVFLL 463
Cdd:cd06174   159 AALALLAAIL 168
MFS_MFSD10 cd17389
Major facilitator superfamily domain-containing protein 10; Major facilitator superfamily ...
91-234 1.12e-04

Major facilitator superfamily domain-containing protein 10; Major facilitator superfamily domain-containing protein 10 (MFSD10) is also called tetracycline transporter-like protein (TETRAN). It is expressed in various human tissues, including the kidney. In cultured cells, its overexpression facilitated the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs). MFSD10/TETRAN overexpression cause resistance to some NSAIDs, suggesting that it may be an organic anion transporter that serves as an efflux pump for some NSAIDs and various other organic anions at the final excretion step. MFSD10 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340947 [Multi-domain]  Cd Length: 391  Bit Score: 44.57  E-value: 1.12e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  91 SLKSVVQFLLLTgmlvggIIGGhVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFS------SMIIISN 164
Cdd:cd17389    71 SLFSLLQFLSSP------ITGA-ASDVYGRKPVLLLTMIGLAISYALWAVSRSFTIFLLSRIVGGISkgnvslSTAIVAD 143
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 165 NSLPITewiRPNSKALVVILSSGALSIGQIILGGLAYVFRD----------WQTLHVVASVPFFVFFLLSRWLVESARWL 234
Cdd:cd17389   144 VTSPKK---RSKGMALIGVAFSLGFIIGPMIGAYFASFTRSlgevffsmpaLFALVLALADLLFIFFFLPETLPSNLRRL 220
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
110-463 1.18e-04

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 44.12  E-value: 1.18e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 110 IGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSsMIIISNNSLPITEWIRPNSKALVVI-LSSGA 188
Cdd:cd17489    50 FAGRLLDRFGRKRLLLIGLLIFALATLLYLLATSVALLLVLRLIHGIG-WGAFTTAAATLVADIIPPSRRGEGIgYYGLA 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 189 LSIGQIILGGLAYVFRDWQTLHVVASVPFFVFFLLSrwlvesarwliitnkldeGLKALRKVARTNGIKNAEETLnievv 268
Cdd:cd17489   129 TTLAMALGPALGLFLYQHLGFAVLFIVAAVLALLAL------------------LLVFLVKDPPPVAAEEAEAGT----- 185
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 269 rstmqeeldaaqtkttvcdLFRNPSMRKRICILVFLRFANTIPFYG--TMVNL---QHVGSNIFLLQVLYGAVALIVRCL 343
Cdd:cd17489   186 -------------------RAFRRLVEKKVLPPALILFLASIAYGAisTFLPLyaaERGISNAGLFFTVYAIALLLSRPF 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 344 ALLTLNHMGRRISQILFMFLVGLSILANTFVPKEMQTLrVALACLGIGCSAAtFSSVAVHFIELIPTVLRARASGIDLTA 423
Cdd:cd17489   247 SGKLSDRKGPKTVIIPGLLLLALGLLLLSFAGSPWMLL-LAAVLYGLGFGLL-FPALQALAVDLVPPHRRGAANGTFFIF 324
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1034573555 424 SRIGAALAPLLMTLTVFFTTLP--WIIYGIFPIIGGLIVFLL 463
Cdd:cd17489   325 FDLGIGLGGLLLGLVAELFGYRamFLLAAVVVLLALVLYIFL 366
MFS_1 pfam07690
Major Facilitator Superfamily;
328-479 1.26e-04

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 43.95  E-value: 1.26e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 328 LLQVLYGAVALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTFVPKeMQTLRVALACLGIGcSAATFSSVAVHFIEL 407
Cdd:pfam07690  36 LLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASS-LWLLLVLRVLQGLG-AGALFPAALALIADW 113
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1034573555 408 IPTVLRARASGIDLTASRIGAALAPLLMTL--TVFFTTLPWIIYGIFPIIGGLIVFLLPETKNLPLPDTIKDVE 479
Cdd:pfam07690 114 FPPEERGRALGLVSAGFGLGAALGPLLGGLlaSLFGWRAAFLILAILSLLAAVLLLLPRPPPESKRPKPAEEAR 187
MFS_GLUT_Class2 cd17432
Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called ...
103-354 1.93e-04

Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT5, also called Solute carrier family 2, facilitated glucose transporter member 5 (SLC2A5), is a well-established fructose transporter found in the small intestine. GLUT7 (or SLC2A7) is a high-affinity glucose and fructose transporter expressed in the small intestine and colon. GLUT9 (or SLC2A9) transports urate and fructose, and is most strongly expressed in the basolateral membranes of proximal renal tubular cells, liver and placenta. It may play a role in urate reabsorption by proximal tubules. GLUT11 (or SLC2A11) is a facilitative glucose transporter expressed in heart and skeletal muscle. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340990 [Multi-domain]  Cd Length: 452  Bit Score: 43.76  E-value: 1.93e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 103 GMLVGGIIGGHVSDRFGRRFILrwcLLQ------LAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPN 176
Cdd:cd17432    62 GGLFGSLLVGPLVIRLGRKGTL---LLNnifaivAAILMGLSKIAKSFEMIIVGRFLVGINAGISLNVVPMYLGESAPKN 138
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 177 SKALVVILSSGALSIG----QI-----ILGGLAYvfrdWQTLHVVASVPFFVFFLLSRWLVESARWLIITNKLDEG-LKA 246
Cdd:cd17432   139 LRGAVGLVPAIFITLGillgQVlglreLLGNEEG----WPLLLALTGVPALLQLLTLPFFPESPRYLLIEKGDEEAaRKA 214
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 247 LRkvaRTNGIKNAEETLnievvrSTMQEELDAAQTKTT--VCDLFRNPSMRKRICILVFLRFA------NTIPFYGTMVn 318
Cdd:cd17432   215 LQ---RLRGKEDVDDEM------EEMLEEQRAEKGVGTvsVLELFRDRSVRWQLISIIVLMAGqqlcgiNAIYFYADSI- 284
                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 1034573555 319 LQHVG---SNIFLLQVLYGAVALIVRCLALLTLNHMGRR 354
Cdd:cd17432   285 FLEAGipeDKIQYVTVGTGACEVLATITCVLVIERLGRR 323
2A0109 TIGR00887
phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the ...
347-473 2.93e-04

phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083). [Transport and binding proteins, Anions]


Pssm-ID: 129965 [Multi-domain]  Cd Length: 502  Bit Score: 43.18  E-value: 2.93e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 347 TLNHMGRRISQILFMFLVGLSILANTFVPKEMqTLRVALACLGIGCSAATFSSVAVHFI---ELIPTVLRARASGIDLTA 423
Cdd:TIGR00887 358 LVDIIGRKPIQLMGFFILTVLFFVLGFAYNHL-STHGFLAIYVLAQFFANFGPNATTFIvpgEVFPTRYRSTAHGISAAS 436
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1034573555 424 SRIGAALAPLLMTL-------TVFFTTLPW-----IIYGIFPIIGGLIVFLLPETKNLPLPD 473
Cdd:TIGR00887 437 GKAGAIIGQFGFLYlaqhgdpTKGYPTGIWmghvlEIFALFMFLGILFTLLIPETKGKSLEE 498
efflux_Bcr_CflA TIGR00710
drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a ...
99-253 3.43e-04

drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.


Pssm-ID: 273229 [Multi-domain]  Cd Length: 385  Bit Score: 42.76  E-value: 3.43e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  99 LLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGF--SSMIIISN----NSLPITEW 172
Cdd:TIGR00710  48 LYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFgaSAGSVISQalvrDIYPGEEL 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 173 IRPNSKALVVILSSGALSigqIILGGLAYVFRDWQTLhvvasvpFFVFFLLSRWLVESARWLIITNKLDEGLKALRKVAR 252
Cdd:TIGR00710 128 SRIYSILMPVLALAPAVA---PLLGGYILVWLSWHAI-------FAFLSLAGILLSALIFFILPETLPYEARIQISTYFE 197

                  .
gi 1034573555 253 T 253
Cdd:TIGR00710 198 T 198
2A0104 TIGR00881
phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, ...
99-439 4.52e-04

phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273319 [Multi-domain]  Cd Length: 379  Bit Score: 42.36  E-value: 4.52e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  99 LLLTGML----VGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAG-FSSMIIISNNSLpITEWI 173
Cdd:TIGR00881  34 LLLSSFSiaygISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGiFQGMGWPPCGRT-VTKWF 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 174 RPNSKALVVILSSGALSIGQIILGGLAYV----FRDWQTLHVVASVPFFVFFLLsrwlvesarwliitnkldeGLKALRK 249
Cdd:TIGR00881 113 SRSERGTWVSFWNCSHNVGGGLLPPLVLFgiaeLYSWHWVFIVPGIIAIIVSLI-------------------CFLLLRD 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 250 VARTNGIKNAEETLNIEVVRSTMQEELDAAQTKTTVCDLFRNP-----------SMRKRICIL----VFL---------- 304
Cdd:TIGR00881 174 SPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKvlwyislgyvfVYVVRTGILdwspLYLtqekgfskek 253
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 305 -RFANTIPFYGTMVNL--------QHVGSNIFLLQVLYgaVALIVRCLALLTLNHMGRRISQILFMFLVGLSIlantFVP 375
Cdd:TIGR00881 254 aSWAFTLYELGGLVGTllagwlsdKLFNGRRGPLAVFF--MALIIVSLLVYWLNPAANPLMDLICLFALGFLV----YGP 327
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1034573555 376 kemqtlrVALAClgigcsaatfssvaVHFIELIPTVLRARASGIDLTASRIGAALAPLLMTLTV 439
Cdd:TIGR00881 328 -------QMLIG--------------VIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLA 370
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
98-232 6.43e-04

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 41.78  E-value: 6.43e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  98 FLLLTGMLVGGIIGGHVSDRFGRR--FILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRP 175
Cdd:COG2271   223 SLPFLAGIVGSLLGGWLSDRLGRRrkLVLAIGLLLAALALLLLALLPSPALAIALLFLAGFGLGGAFGLLWALAAELFPK 302
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1034573555 176 NSKALV--VILSSGAL--SIGQIILGGLAYVFRDWQTLHVVASVPFFVFFLLSRWLVESAR 232
Cdd:COG2271   303 KARGTAsgLVNTFGFLggALGPLLVGYLLDATGYQAAFLLLAALALLAALLALLLLRETRK 363
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
103-224 7.50e-04

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 41.77  E-value: 7.50e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 103 GMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEwIRPNSKALVV 182
Cdd:cd17324   246 AGVVGSPLAGRLADRGGRRALLIALLLLAAALLLLTLLGPSPLLLLVGLVLWGLGFFAAHSALQTRVLR-LAPEARGLAS 324
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1034573555 183 ILSSGALSIGQII---LGGLAYVFRDWQTLHVVASVPFFVFFLLS 224
Cdd:cd17324   325 SLYLAAYNLGGALgaaLGGLVLDHGGWAGVGWVGAALLLLALLLA 369
MFS_SVOPL cd17442
Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) of the Major Facilitator Superfamily; ...
94-464 9.80e-04

Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) of the Major Facilitator Superfamily; Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) or SVOP-like protein is a transporter-like protein that shares structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. It belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341000 [Multi-domain]  Cd Length: 375  Bit Score: 41.33  E-value: 9.80e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  94 SVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFL-----AGFSSMIIISnnslp 168
Cdd:cd17442    39 ALVTTMVFFGYMVFSILLGLLADRYGRWKILLLSFVWGAYFSLLTSFAPSYIWFVFLRCMvgcgvSGHSQGLIIK----- 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 169 iTEWIRPNSKALVVILSSGALSIGQIILGGLAYVF---RDWQTLHVVASVPFFVFFLLSRWLVESAR-----WLIITnkl 240
Cdd:cd17442   114 -TEFLPTKYRGYMLPLSQIFWLAGSLLIIGLASVViptLGWRWLIRFASIPGIILIVVFKFIPRTTLqiwviWLGIS--- 189
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 241 deglkalrkVARTNGIKNAEETLNIEVVRSTMQEELDAAQTkttvcdlfrnPSMRKRICILVFLRFANtipfYGTMvnlq 320
Cdd:cd17442   190 ---------FAYYGVILASSELLERNLLCGSDPSDEEAGIK----------HIESESPCYCHMFNPSD----YQTM---- 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 321 hvgsnifLLQVLyGAVALIVrcLALLTLNHMGRRISQILFMFLVGLSILANTfVPKEMQTLRVALACLGiGCSAATFSSV 400
Cdd:cd17442   243 -------IISTL-GEIALNP--LNILGINFLGRRLSLVITMGLTAIFFLLLN-ICTSSAGLTIFLFMLR-ALVSANFNTV 310
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1034573555 401 AVHFIELIPTVLRARASGIDLTASRIGAALAP----LLMTLTVfftTLPWIIYGIFPIIGGLIVFLLP 464
Cdd:cd17442   311 YIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPfisqVLMSASV---LGALCLFSSVCIVCAISAFTLP 375
MFS_MelB_like cd17332
Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major ...
273-396 1.03e-03

Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily; This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340890 [Multi-domain]  Cd Length: 424  Bit Score: 41.44  E-value: 1.03e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 273 QEELDAAQTKTTVCDLFRNPSMRKRICILVFLRFANTI-----PFYGTMVNLQHvgSNIFLLQVLYGAVALIVRCLALLT 347
Cdd:cd17332   202 EEEKSKLPLLKSLKALLKNRPFLILLLAYLLYFLAFNIvntvlVYYFKYVLGGR--AELVLLLLLILSGALLALLPWPPL 279
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1034573555 348 LNHMGRRISQILFMFLVGLSILANTFVPKEMQTLRVALACL-GIGCSAAT 396
Cdd:cd17332   280 KKRFGKKKAFFIGLLLAILGLLLLFFLPPGNLVLILVLAVLaGIGYGGAN 329
MFS_YjiJ cd06180
Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of ...
103-228 1.24e-03

Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Escherichia coli YjiJ and other uncharacterized proteins. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340869 [Multi-domain]  Cd Length: 371  Bit Score: 41.14  E-value: 1.24e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 103 GMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVV 182
Cdd:cd06180    46 GYLVGALLASFLRRRGRARRLIRGGLLLTVLLLAAMALTSGFAALLALRFLAGAASAFVFVFGSNLVLHHATAAGRGHLI 125
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1034573555 183 ILSSGALSIGqIILGGLAYVF-----RDWQTLHVVASVPFFVFFLLSRWLV 228
Cdd:cd06180   126 GLLFAGVGLG-IALSGLLVPAglgggLSWRAGWLALALLSAVLLLLSFLLL 175
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
98-460 1.52e-03

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 41.04  E-value: 1.52e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  98 FLLLTGMLVGGI---IGGHVSDR----FGRR--FILRWCLLqLAITDTCAAFAPTFP------VYCVLRFLAGFS-SMII 161
Cdd:COG2211    50 LILLVARLWDAItdpLIGALSDRtrtrWGRRrpWILIGAIP-LALSFVLLFTAPDLSptgkliYALVTYLLLGLAyTLVN 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 162 ISNNSLP--ITEwiRPNSKALVVILSSGALSIGQIILGGLAYVFRD---------WQTLHVVASVPFFVFFLLSRWLves 230
Cdd:COG2211   129 IPYSALGaeLTP--DYEERTRLSSWRFAFAGLGGLLASVLPPPLVAafggdaalgYRLTALIFAVLGLLAFLLTFFG--- 203
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 231 arwliitnkldeglkalrkvartngiknaeetlnievVRSTMQEELDAAQTKTTVCDLFRNPSMRkRICILVFLRF---- 306
Cdd:COG2211   204 -------------------------------------TKERPVPEEEKVSLKESLKALLKNRPFL-LLLLAYLLFFlala 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 307 --ANTIPFYGTMVnLQHVGSNIFLLQVLYGAVALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTFV-PKEMQTLRV 383
Cdd:COG2211   246 lvAALLLYYFKYV-LGLSAALVGLLLALYFLAALLGAPLWPRLAKRFGKKKAFIIGLLLAALGLLLLFFLgPGNLWLLLV 324
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1034573555 384 ALACLGIGCSAATfssvavhfieLIPTVLRARAsgIDLTASRIGAALAPLLMTLTVFFTTLPWiiyGIFPIIGGLIV 460
Cdd:COG2211   325 LAALAGIGLGAIL----------VLPWAMLADV--VDYDEWKTGRRREGLYFGIFTFAIKLGQ---ALAGALAGLLL 386
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
103-463 3.10e-03

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 39.86  E-value: 3.10e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 103 GMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVV 182
Cdd:cd17319    50 GYALFQVPGGWLLDRFGARKVLAVSMLLWSLFTALTGFATSLTSLYVLRFLLGVAEAGFFPGAIKALAEWFPARERGRAT 129
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 183 ILSSGALSIGQII---LGGLAYVFRDWQTLHVVASVPFFVFFLLSRWLVESARWLIITNkldeglkalrkvartngikna 259
Cdd:cd17319   130 GLFNSGAPLGAAIgppLSGWLLLLFGWRWAFIIEGLLGLLLAVLWWFYLRQVWGLALGY--------------------- 188
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 260 eetlnievvrstmqeeldaaqtkttvcdlfrnpsmrkrICILVFLRFANT-IPFY---GTMVNLQHVG---SNIFLLqvl 332
Cdd:cd17319   189 --------------------------------------FGINYALYGLLTwLPTYlkqARGFSLKQVGllaAIPFLA--- 227
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 333 yGAVALIVRCLALLTLNHMGRRISQILFMFLVGLSILANTFVPKEMqtLRVALACLGIGCSAATFSSVAVHFIELIPTVL 412
Cdd:cd17319   228 -GAIGMILGGRLSDRLLRGARRLVIIIGLLLAAVGLLLAYLTTSPV--VAVILLSLAGFGIGAASPVFWSLPADLLPGEA 304
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1034573555 413 RARASGIDLTASRIGAALAPLLMTLTVFFT---TLPWIIYGIFPIIGGLIVFLL 463
Cdd:cd17319   305 AATAGGLINSGGNLGGFVAPLLIGYLVDATgsyTAAFLFLAAVALLAALLVLLL 358
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
298-487 3.96e-03

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 39.48  E-value: 3.96e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 298 ICILVFLRFANT------IPFYgtmvnLQHVGSNIFLLQVLYGAVA---LIVRCLALLTLNHMGRRISQILFMFLVGLSI 368
Cdd:cd17325     1 LSLALFLDMLGYgiiipiLPLY-----AESLGASVAQIGLIVAAYAlaqLLFSPPAGRLSDRFGRKRLLLLGLLLLAVST 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 369 LANTFVPKeMQTLRVALACLGIGcSAATFSSVAVHFIELIPTVLRARASGIDLTASRIGAALAPLLMTLTVFFT--TLPW 446
Cdd:cd17325    76 LLFAFATS-YWQLLLARFLQGLA-SAAVWPAAMALIADIAPPEERGRAMGIFSSAIGLGFLIGPLLGGLLADALgyRAPF 153
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1034573555 447 IIYGIFPIIGGLIVFLLPETKNLPLPDTIKDVENQKKNLKE 487
Cdd:cd17325   154 LVCAALALLALVLALLLLPEPRPPPNKRAVSAARLRSGLRL 194
MFS_FucP_MFSD4_like cd17333
Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein ...
94-463 4.03e-03

Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4, and similar proteins; This family is composed of bacterial L-fucose permease (FucP), eukaryotic Major facilitator superfamily domain-containing protein 4 (MFSD4) proteins, and similar proteins. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. The MFSD4 subfamily consists of two vertebrate members: MFSD4A and MFSD4B. The function of MFSD4A is unknown. MFSD4B is more commonly know as Sodium-dependent glucose transporter 1 (NaGLT1), a primary fructose transporter in rat renal brush-border membranes that also facilitates sodium-independent urea uptake. The FucP/MFSD4 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340891 [Multi-domain]  Cd Length: 372  Bit Score: 39.61  E-value: 4.03e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555  94 SVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIISN-NSLPITEW 172
Cdd:cd17333    34 SVIFSSQNAGYLIGSLLAGFLMKRLGRRRTLILGLLLISLALALIFATPSIYLFVVLMFLAGLGAGILDTGaNTFVGALF 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 173 IRPNSKALVVIlsSGALSIGQIIlgglayvfrdwqtlhvvasVPFFVFFLLSRWLVESARWLIItnkldeGLKALrkvar 252
Cdd:cd17333   114 EESSATRLNVL--HGFFGLGALI-------------------GPLIATSLLTSELSWSWAYLII------GLIYL----- 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 253 tngiknaeeTLNIEVVRSTMQEELDAAQTKTTVCDLFRNPSMRKRICILVFL------------RFANTIPFYGTMVNLQ 320
Cdd:cd17333   162 ---------LLAILILLTLFPELPSARNPQQSVGAFSASASRLLRNPSIILGalalflyvgaetAFSSWVPSYLVEKKHV 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 321 HVGSNIFLLQVLYGAVALIVRCLALLTlnhmgRRISQILFMFLVGLSILANTFVPKEMQTLR---VALACLGIGCSA--A 395
Cdd:cd17333   233 SDGLAGYLLSGFWVGITIGRLLGGPIS-----RRIKPHTLLVLSGSGALLGLLILLLAPTLVvglVATALLGLFMAAlfP 307
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1034573555 396 TFSSVAVHFIelipTVLRARASGIDLTASRIGAALAPLLMTLTVFFTTLPWIIYgiFPIIGGLIVFLL 463
Cdd:cd17333   308 TILSLGISNL----PYAKGKGTSVLLAAGSIGGAIIPFIMGFIAEAVGIQTAML--LITILYAIIFVL 369
MFS_Azr1_MDR_like cd17502
Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance ...
103-236 4.63e-03

Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341045 [Multi-domain]  Cd Length: 337  Bit Score: 39.08  E-value: 4.63e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 103 GMLVGGIIGGHVSDRFGrrfiLRWC-LLQLAITDTCAAFAPTFPVYCVLRFLAGFSSMIIIsnNSLPI-TEWIR---PNS 177
Cdd:cd17502   131 ASVAGPLIGGAFTDHLS----WRWCfYINLPIGGLALALLRTILLSSIFGFLFGGALFGLI--YYLPLyFQLVLgdsATK 204
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 178 KALVVILSSGALSIGQIILGGLAYVFRDWQTLHVVASVPFFV-FFLLSRWLVESARWLII 236
Cdd:cd17502   205 SGVRLLPLIIGLVIGSIISGALISKTGRYKPLIVIGTILMSVgAGLLTTLTLDTSKWLLI 264
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
292-467 5.12e-03

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 39.19  E-value: 5.12e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 292 PSMRKRICILVFLRFANTIPFYGTMVNL----QHVGSNIFLLQVLYGAVALIVRCLALLT---LNHMGRR----ISQILF 360
Cdd:COG2814     6 RRRWLALLALALGAFLSGLGIGIVLPALpliaADLGASPAQAGLVVTAYLLGAALGAPLAgrlADRFGRRrvllLGLLLF 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 361 MFLVGLSILANTFVPkemqtlrVALACLGIGCSAATFSSVAVHFI-ELIPTVLRARASGIDLTASRIGAALAPLLMTLTV 439
Cdd:COG2814    86 ALGSLLCALAPSLWL-------LLAARFLQGLGAGALFPAALALIaDLVPPERRGRALGLLGAGLGLGPALGPLLGGLLA 158
                         170       180       190
                  ....*....|....*....|....*....|.
gi 1034573555 440 FFTTLPWIIYGIFP---IIGGLIVFLLPETK 467
Cdd:COG2814   159 DLFGWRWVFLVNAVlalLALLLLLRLLPESR 189
synapt_SV2 TIGR01299
synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger ...
346-467 5.57e-03

synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.


Pssm-ID: 130366 [Multi-domain]  Cd Length: 742  Bit Score: 39.19  E-value: 5.57e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 346 LTLNHMGRRISQILFMFLVGLSILANTFVPKEmqTLRVALACLGIGCSAATFSSVAVHFIELIPTVLRARASGIDLTASR 425
Cdd:TIGR01299 617 LLMDKIGRLRMLAGSMVLSCISCFFLSFGNSE--SAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCK 694
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1034573555 426 IGAALAPLLMTLTVFFT-TLPWIIYGIFPIIGGLIVFLLPETK 467
Cdd:TIGR01299 695 AAAVLGILIFGSFVGITkAAPILFASAALACGGLLALKLPDTR 737
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
335-470 7.56e-03

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 38.71  E-value: 7.56e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 335 AVALIVRCLALLTLNHM----GRRISQILFMFLVGLSILANTFVPKEMQTLRVALAClGIGcSAATFSSVAVHFIELIPT 410
Cdd:COG2223    47 AIPVLVGALLRIPLGFLvdrfGPRRVLLIGLLLLGIGLLLLALAVSYWLLLLLGLLL-GIG-GGGSFAVGIALVSKWFPP 124
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1034573555 411 VLRARASGIDLTASRIGAALAPLLMTL--TVFFTTLPWIIYGIFPIIGGLIVFLLpeTKNLP 470
Cdd:COG2223   125 DRRGLALGLAAGGGNLGAAVAAFLAPLliAAFGWRNAFLILGILLLVVAVLAWLF--LRDPP 184
MFS_SLC17A9_like cd17380
Solute carrier family 17 member 9 and similar proteins of the Major Facilitator Superfamily of ...
109-238 7.63e-03

Solute carrier family 17 member 9 and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily includes solute carrier family 17 member 9 (SLC17A9) and similar proteins including plant inorganic phosphate transporters (PHT4) that are also probably anion transporters. SLC17A9, also called vesicular nucleotide transporter (VNUT), is involved in vesicular storage and exocytosis of ATP. It facilitates the accumulation of ATP and other nucleotides in secretory vesicles such as adrenal chromaffin granules and synaptic vesicles. It also functions as a lysosomal ATP transporter and regulates cell viability. Plant PHT4 family transporters mediate the transport of inorganic phosphate and may also transport organic anions. The Arabidopsis protein AtPHT4;4 is a chloroplast-localized ascorbate transporter. PHT4 proteins show differential expression that suggests specialized functions. The SLC17A9-like subfamily belongs to the Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340938 [Multi-domain]  Cd Length: 361  Bit Score: 38.69  E-value: 7.63e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 109 IIGGHVSDRFGRRFILRW--CLLQLAITDTCAAFAPTFPVYCVLRFLAG------FSSMiiisnNSLpITEWIRPNSKAL 180
Cdd:cd17380    52 VLGGYLADRFGGKKVLLLavALWSLATLLTPLLAYSSLPLLILSRILLGlgegvhFPSM-----TSL-FSRWVPVSERSR 125
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1034573555 181 VVILSSGALSIGQIILGGLAYVFRD---WQTLHVVASVPFFVFFLLSRWLVESARWLIITN 238
Cdd:cd17380   126 AVSIVTAGSYLGTLLGGLIGPLLLEyygWPSVFYFFGLLGLLWALVWLIYLPPVWAIIVAH 186
MFS_MMR_MDR_like cd17504
Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) ...
100-224 8.55e-03

Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of putative multidrug resistance (MDR) transporters including Chlamydia trachomatis antiseptic resistance protein QacA_2, and Serratia sp. DD3 Bmr3. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341047 [Multi-domain]  Cd Length: 371  Bit Score: 38.33  E-value: 8.55e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 100 LLTGMLVGGIIGgHVSDRFGRRFILRWCLLQLAITDTCAAFAPTFPVYCVLRFLAGFS------SMIIisnnslpITEWI 173
Cdd:cd17504    41 LLVGAVSTPILG-RLGDLYGRKKVLLIVLAIYTAGSLLAAFAPNLPVLIAGRALQGIGgavfplAFAL-------VREEF 112
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1034573555 174 RPNSKALVVILSSGALSIGQII---LGGLAYVFRDWQTLHVVASVPFFVFFLLS 224
Cdd:cd17504   113 PPERVPVAQGILSATFGIGAGIglpLGGWIVQHLGWRWIFWTAAPVAVLLAALV 166
MFS_PhT cd17364
Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This ...
295-467 9.52e-03

Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This subfamily is composed of predominantly fungal and plant high-affinity inorganic phosphate transporters (PhT or PiPT), which are involved in the uptake, translocation, and internal transport of inorganic phosphate. They also function in sensing external phosphate levels as transceptors. Phosphate is crucial for structural and metabolic needs, including nucleotide and lipid synthesis, signalling and chemical energy storage. The Pht subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340922 [Multi-domain]  Cd Length: 389  Bit Score: 38.41  E-value: 9.52e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 295 RKRICILVFLRFANTIPFYGTMVNLQHVGSNIF---------LLQVLYGAVALIVRC-------LALLTLNHMGRRISQI 358
Cdd:cd17364   195 RKHLLGTAGTWFLLDIAFYGQNLFQSTIISAIGfsktmnayqELFNIAVGQLIIALAgtvpgywFTVFLIDRIGRKKIQM 274
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034573555 359 LFMFLVGLSILANTFVPKEMQTLR-VALACLGIGCSAATFSSVAVHFI---ELIPTVLRARASGIDLTASRIGAALAPLL 434
Cdd:cd17364   275 MGFFGMTIFLLILAGPYDHWKISTiGFFVLYGLTFFFSNFGPNTTTFIvpaEVFPARVRSTCHGISAASGKIGAIVGSFL 354
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1034573555 435 MTLTVFFTTLPW--IIYGIFPIIGGLIVFLLPETK 467
Cdd:cd17364   355 FLSLTQNIGVRNvlIILAGVALLGIILTLLFPEEK 389
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH