NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1034604294|ref|XP_016881327|]
View 

zinc finger protein 407 isoform X1 [Homo sapiens]

Protein Classification

zf-H2C2_5 and zf-H2C2_2 domain-containing protein( domain architecture ID 10604184)

zf-H2C2_5 and zf-H2C2_2 domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
zf-H2C2_2 pfam13465
Zinc-finger double domain;
1728-1750 1.87e-03

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 1.87e-03
                           10        20
                   ....*....|....*....|...
gi 1034604294 1728 HLTRHKRVHTGEKPYRCPWCDYR 1750
Cdd:pfam13465    1 NLKRHMRTHTGEKPYKCPECGKS 23
zf-H2C2_2 pfam13465
Zinc-finger double domain;
1642-1669 2.04e-03

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.97  E-value: 2.04e-03
                           10        20
                   ....*....|....*....|....*...
gi 1034604294 1642 ALNNHMKLHTGEKPFKCtwPTCHYSFLT 1669
Cdd:pfam13465    1 NLKRHMRTHTGEKPYKC--PECGKSFKS 26
zf-H2C2_5 pfam13909
C2H2-type zinc-finger domain;
1714-1738 2.39e-03

C2H2-type zinc-finger domain;


:

Pssm-ID: 404746 [Multi-domain]  Cd Length: 25  Bit Score: 36.76  E-value: 2.39e-03
                           10        20
                   ....*....|....*....|....*
gi 1034604294 1714 FKCDECNFASTTQSHLTRHKRVHTG 1738
Cdd:pfam13909    1 YKCSQCDYSTAWKSNLKRHLRKHTG 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
1557-1578 3.67e-03

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 3.67e-03
                           10        20
                   ....*....|....*....|..
gi 1034604294 1557 HIRTHTGSKPFKCKICHFATAQ 1578
Cdd:pfam13465    5 HMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
1700-1725 6.19e-03

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 6.19e-03
                           10        20
                   ....*....|....*....|....*.
gi 1034604294 1700 ALTKHRRQHTGEKPFKCDECNFASTT 1725
Cdd:pfam13465    1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
 
Name Accession Description Interval E-value
zf-H2C2_2 pfam13465
Zinc-finger double domain;
1728-1750 1.87e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 1.87e-03
                           10        20
                   ....*....|....*....|...
gi 1034604294 1728 HLTRHKRVHTGEKPYRCPWCDYR 1750
Cdd:pfam13465    1 NLKRHMRTHTGEKPYKCPECGKS 23
zf-H2C2_2 pfam13465
Zinc-finger double domain;
1642-1669 2.04e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.97  E-value: 2.04e-03
                           10        20
                   ....*....|....*....|....*...
gi 1034604294 1642 ALNNHMKLHTGEKPFKCtwPTCHYSFLT 1669
Cdd:pfam13465    1 NLKRHMRTHTGEKPYKC--PECGKSFKS 26
zf-H2C2_5 pfam13909
C2H2-type zinc-finger domain;
1714-1738 2.39e-03

C2H2-type zinc-finger domain;


Pssm-ID: 404746 [Multi-domain]  Cd Length: 25  Bit Score: 36.76  E-value: 2.39e-03
                           10        20
                   ....*....|....*....|....*
gi 1034604294 1714 FKCDECNFASTTQSHLTRHKRVHTG 1738
Cdd:pfam13909    1 YKCSQCDYSTAWKSNLKRHLRKHTG 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
1557-1578 3.67e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 3.67e-03
                           10        20
                   ....*....|....*....|..
gi 1034604294 1557 HIRTHTGSKPFKCKICHFATAQ 1578
Cdd:pfam13465    5 HMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
1700-1725 6.19e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 6.19e-03
                           10        20
                   ....*....|....*....|....*.
gi 1034604294 1700 ALTKHRRQHTGEKPFKCDECNFASTT 1725
Cdd:pfam13465    1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
 
Name Accession Description Interval E-value
zf-H2C2_2 pfam13465
Zinc-finger double domain;
1728-1750 1.87e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 1.87e-03
                           10        20
                   ....*....|....*....|...
gi 1034604294 1728 HLTRHKRVHTGEKPYRCPWCDYR 1750
Cdd:pfam13465    1 NLKRHMRTHTGEKPYKCPECGKS 23
zf-H2C2_2 pfam13465
Zinc-finger double domain;
1642-1669 2.04e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.97  E-value: 2.04e-03
                           10        20
                   ....*....|....*....|....*...
gi 1034604294 1642 ALNNHMKLHTGEKPFKCtwPTCHYSFLT 1669
Cdd:pfam13465    1 NLKRHMRTHTGEKPYKC--PECGKSFKS 26
zf-H2C2_5 pfam13909
C2H2-type zinc-finger domain;
1714-1738 2.39e-03

C2H2-type zinc-finger domain;


Pssm-ID: 404746 [Multi-domain]  Cd Length: 25  Bit Score: 36.76  E-value: 2.39e-03
                           10        20
                   ....*....|....*....|....*
gi 1034604294 1714 FKCDECNFASTTQSHLTRHKRVHTG 1738
Cdd:pfam13909    1 YKCSQCDYSTAWKSNLKRHLRKHTG 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
1557-1578 3.67e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 3.67e-03
                           10        20
                   ....*....|....*....|..
gi 1034604294 1557 HIRTHTGSKPFKCKICHFATAQ 1578
Cdd:pfam13465    5 HMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
1700-1725 6.19e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 6.19e-03
                           10        20
                   ....*....|....*....|....*.
gi 1034604294 1700 ALTKHRRQHTGEKPFKCDECNFASTT 1725
Cdd:pfam13465    1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH