CCR4-NOT transcription complex subunit 5, putative [Plasmodium falciparum 3D7]
NOT2/NOT3/NOT5 family protein( domain architecture ID 10514428)
NOT2/NOT3/NOT5 family protein similar to Homo sapiens CCR4-NOT transcription complex subunit 2 (CNOT2), which is a component of the CCR4-NOT complex that is one of the major cellular mRNA deadenylases and is linked to various cellular processes including bulk mRNA degradation, miRNA-mediated repression, translational repression during translational initiation and general transcription regulation
List of domain hits
Name | Accession | Description | Interval | E-value | |||
NOT2_3_5 | pfam04153 | NOT2 / NOT3 / NOT5 family; NOT1, NOT2, NOT3, NOT4 and NOT5 form a nuclear complex that ... |
67-169 | 8.23e-26 | |||
NOT2 / NOT3 / NOT5 family; NOT1, NOT2, NOT3, NOT4 and NOT5 form a nuclear complex that negatively regulates the basal and activated transcription of many genes. This family includes NOT2, NOT3 and NOT5. : Pssm-ID: 461199 Cd Length: 121 Bit Score: 95.36 E-value: 8.23e-26
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Name | Accession | Description | Interval | E-value | |||
NOT2_3_5 | pfam04153 | NOT2 / NOT3 / NOT5 family; NOT1, NOT2, NOT3, NOT4 and NOT5 form a nuclear complex that ... |
67-169 | 8.23e-26 | |||
NOT2 / NOT3 / NOT5 family; NOT1, NOT2, NOT3, NOT4 and NOT5 form a nuclear complex that negatively regulates the basal and activated transcription of many genes. This family includes NOT2, NOT3 and NOT5. Pssm-ID: 461199 Cd Length: 121 Bit Score: 95.36 E-value: 8.23e-26
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CDC36 | COG5601 | General negative regulator of transcription subunit [Transcription]; |
89-173 | 1.48e-06 | |||
General negative regulator of transcription subunit [Transcription]; Pssm-ID: 227888 Cd Length: 172 Bit Score: 46.13 E-value: 1.48e-06
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Name | Accession | Description | Interval | E-value | |||
NOT2_3_5 | pfam04153 | NOT2 / NOT3 / NOT5 family; NOT1, NOT2, NOT3, NOT4 and NOT5 form a nuclear complex that ... |
67-169 | 8.23e-26 | |||
NOT2 / NOT3 / NOT5 family; NOT1, NOT2, NOT3, NOT4 and NOT5 form a nuclear complex that negatively regulates the basal and activated transcription of many genes. This family includes NOT2, NOT3 and NOT5. Pssm-ID: 461199 Cd Length: 121 Bit Score: 95.36 E-value: 8.23e-26
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CDC36 | COG5601 | General negative regulator of transcription subunit [Transcription]; |
89-173 | 1.48e-06 | |||
General negative regulator of transcription subunit [Transcription]; Pssm-ID: 227888 Cd Length: 172 Bit Score: 46.13 E-value: 1.48e-06
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Blast search parameters | ||||
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