|
Name |
Accession |
Description |
Interval |
E-value |
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
256-475 |
5.83e-18 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 84.67 E-value: 5.83e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 256 LDPKHPQAKVLLkvmvdqaqearqeAGILAVQGKLQRALQCINCAIENNPLDPSLFLFRGIMYRRLREFDSAVEDFLKAL 335
Cdd:COG0457 3 LDPDDAEAYNNL-------------GLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQAL 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 336 DMMTEHQEdlvqqaqcqlllAYNDFAVHCYLQGAYQESVLLLSKALKDEQREKGLYINRGDCFFQLGNLIFAEADYQQAP 415
Cdd:COG0457 70 ELDPDDAE------------ALNNLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERAL 137
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 416 ALSPKDEGAHLRLGLLQEKLGFCERRRRQFQKTENHFSMAIQHNPQKPQYYLYRTRSRQL 475
Cdd:COG0457 138 ELDPDDADALYNLGIALEKLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLL 197
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
301-569 |
4.35e-16 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 78.90 E-value: 4.35e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 301 IENNPLDPSLFLFRGIMYRRLREFDSAVEDFLKALDMMTEHQEdlvqqaqcqlllAYNDFAVHCYLQGAYQESVLLLSKA 380
Cdd:COG0457 1 LELDPDDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAE------------ALYNLGLAYLRLGRYEEALADYEQA 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 381 LKDEQREKGLYINRGDCFFQLGNLIFAEADYQQAPALSPKDEGAHLRLGLLQEKLGfcerrrrQFQKTENHFSMAIQHNP 460
Cdd:COG0457 69 LELDPDDAEALNNLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELG-------RYDEAIEAYERALELDP 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 461 QKPQYYLYRTRSRQLTQNIFGARQgvatvLLLDPKQPKLLPLMANLFPGLSVEEVLNSQVAHLARLQLERVVEHSLQAGT 540
Cdd:COG0457 142 DDADALYNLGIALEKLGRYEEALE-----LLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTL 216
|
250 260
....*....|....*....|....*....
gi 1741462173 541 PQDIVGRLKERELERQRAARALQLSWKLE 569
Cdd:COG0457 217 AALAELLLLALALLLALRLAALALYQYRA 245
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
87-361 |
1.21e-15 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 78.23 E-value: 1.21e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 87 YYHRGHQCLEQEDWEVAVLFFSRGLHLDSQLVEFYALRAEAYIQLCDFSSAAQNLRKAYSSQPENTDFLERLTLVLYLKG 166
Cdd:COG2956 11 WYFKGLNYLLNGQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYLKAG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 167 QclfeqcaFLDALNVFSQASELQPEKFCFRYRCMACLLALKRHRECLSFVTKEVEHGTTNADVYILRARLYNFFQQPSLC 246
Cdd:COG2956 91 L-------LDRAEELLEKLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDYDEA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 247 HRDLHSALLLDPKHPQAKVLLkvmvdqaqearqeAGILAVQGKLQRALQCINCAIENNPLDPSLFLFRGIMYRRLREFDS 326
Cdd:COG2956 164 IEALEKALKLDPDCARALLLL-------------AELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEE 230
|
250 260 270
....*....|....*....|....*....|....*
gi 1741462173 327 AVEDFLKALDmmtEHQEDLVQQAQCQLLLAYNDFA 361
Cdd:COG2956 231 ALELLRKALE---LDPSDDLLLALADLLERKEGLE 262
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
274-560 |
1.44e-13 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 75.03 E-value: 1.44e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 274 AQEARQEAGILAVQGKLQRALQCINCAIENNPLDPSLFLFRGIMYRRLREfdsAVEDFLKALDMMTEHQEDLVQQAQCQL 353
Cdd:COG3914 1 AAAAALLALAALAAAALLAAAAAAELALAAELEAAALAAALGLALLLLAA---LAEAAAAALLALAAGEAAAAAAALLLL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 354 LLAYNDFAVHCYLQGAYQESVLLLSKALKDEQREKGLYINRGDCFFQLGNLIFAEADYQQAPALSPKDEGAHLRLGLLQE 433
Cdd:COG3914 78 AALLELAALLLQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNLGEALR 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 434 KLGfcerrrrQFQKTENHFSMAIQHNPQKPQYYLYRTRSRQLTQNIFGARQGVATVLLLDPKQPKLLPLMANLFPGLSVE 513
Cdd:COG3914 158 RLG-------RLEEAIAALRRALELDPDNAEALNNLGNALQDLGRLEEAIAAYRRALELDPDNADAHSNLLFALRQACDW 230
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1741462173 514 EVLNSQVAHLARLQLERVVE-----HSLQAGTPQDIvgrlkeRELERQRAAR 560
Cdd:COG3914 231 EVYDRFEELLAALARGPSELspfalLYLPDDDPAEL------LALARAWAQL 276
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
273-421 |
4.75e-13 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 67.14 E-value: 4.75e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 273 QAQEARQEAGILAVQGKLQRALQCINCAIENNPLDPSLFLFRGIMYRRLREFDSAVEDFLKALDMMTEHQEdlvqqaqcq 352
Cdd:COG4783 3 CAEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPE--------- 73
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1741462173 353 lllAYNDFAVHCYLQGAYQESVLLLSKALKDEQREKGLYINRGDCFFQLGNLIFAEADYQQAPALSPKD 421
Cdd:COG4783 74 ---ARLNLGLALLKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPDD 139
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
304-437 |
1.15e-12 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 68.40 E-value: 1.15e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 304 NPLDPSLFLFRGIMYRRLREFDSAVEDFLKALdmmtEHQEDLVQqaqcqlllAYNDFAVHCYLQGAYQESVLLLSKALKD 383
Cdd:COG4785 69 LPDLAQLYYERGVAYDSLGDYDLAIADFDQAL----ELDPDLAE--------AYNNRGLAYLLLGDYDAALEDFDRALEL 136
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1741462173 384 EQREKGLYINRGDCFFQLGNLIFAEADYQQAPALSPKDEGAHLRLGLLQEKLGF 437
Cdd:COG4785 137 DPDYAYAYLNRGIALYYLGRYELAIADLEKALELDPNDPERALWLYLAERKLDP 190
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
356-599 |
1.67e-12 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 68.49 E-value: 1.67e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 356 AYNDFAVHCYLQGAYQESVLLLSKALKDEQREKGLYINRGDCFFQLGNLIFAEADYQQAPALSPKDEGAHLRLGLLQEKL 435
Cdd:COG0457 10 AYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALNNLGLALQAL 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 436 GfcerrrrQFQKTENHFSMAIQHNPQKPQYYLYRTRSRQLTQNIFGARQGVATVLLLDPKQPKLLPLMANLFPGLSVEEv 515
Cdd:COG0457 90 G-------RYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRYE- 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 516 lnSQVAHLARLQLERVVEHSLQAGTPQDIVGRLKERELERQRAARALQLSWKLEQPLFETSKELEATHQSLQAKPEGPEE 595
Cdd:COG0457 162 --EALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLLLALALLLALRLAALA 239
|
....
gi 1741462173 596 EAKA 599
Cdd:COG0457 240 LYQY 243
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
248-468 |
2.29e-12 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 68.60 E-value: 2.29e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 248 RDLHSALLLDPKHPQAKVLLkvmvdqaqearqeAGILAVQGKLQRALQCINCAIENNPLDPSLFLFRGIMYRRLREFDSA 327
Cdd:COG2956 63 RIHQKLLERDPDRAEALLEL-------------AQDYLKAGLLDRAEELLEKLLELDPDDAEALRLLAEIYEQEGDWEKA 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 328 VEDFLKALDMMTEHqedlvQQAQCQLLLAYndfavhcYLQGAYQESVLLLSKALKDEQREKGLYINRGDCFFQLGNLIFA 407
Cdd:COG2956 130 IEVLERLLKLGPEN-----AHAYCELAELY-------LEQGDYDEAIEALEKALKLDPDCARALLLLAELYLEQGDYEEA 197
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1741462173 408 EADYQQAPALSPKDEGAHLRLGLLQEKLGfcerrrrQFQKTENHFSMAIQHNPQKPQYYLY 468
Cdd:COG2956 198 IAALERALEQDPDYLPALPRLAELYEKLG-------DPEEALELLRKALELDPSDDLLLAL 251
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
111-387 |
2.46e-12 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 68.11 E-value: 2.46e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 111 LHLDSQLVEFYALRAEAYIQLCDFSSAAQNLRKAYSSQPENTDFLERLTLVLYLKGQclfeqcaFLDALNVFSQASELQP 190
Cdd:COG0457 1 LELDPDDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGR-------YEEALADYEQALELDP 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 191 EkfcfryrcmacllalkrhreclsfvtkevehgttNADVYILRARLYNFFQQPSLCHRDLHSALLLDPKHPQAKVLLkvm 270
Cdd:COG0457 74 D----------------------------------DAEALNNLGLALQALGRYEEALEDYDKALELDPDDAEALYNL--- 116
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 271 vdqaqearqeAGILAVQGKLQRALQCINCAIENNPLDPSLFLFRGIMYRRLREFDSAVEDFLKALDmmTEHQEDLVQQAQ 350
Cdd:COG0457 117 ----------GLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRYEEALELLEKLEA--AALAALLAAALG 184
|
250 260 270
....*....|....*....|....*....|....*..
gi 1741462173 351 CQLLLAYNDFAVHCYLQGAYQESVLLLSKALKDEQRE 387
Cdd:COG0457 185 EAALALAAAEVLLALLLALEQALRKKLAILTLAALAE 221
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
202-444 |
3.16e-12 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 67.72 E-value: 3.16e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 202 CLLALKRHRECLSFVTKEVEHGTTNADVYILRARLYNFFQQPSLCHRDLHSALLLDPKHPQAKVLLkvmvdqaqearqeA 281
Cdd:COG0457 17 AYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALNNL-------------G 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 282 GILAVQGKLQRALQCINCAIENNPLDPSLFLFRGIMYRRLREFDSAVEDFLKALDMMTEHQEDLVQQAQCQLLLAYNDFA 361
Cdd:COG0457 84 LALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRYEEA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 362 VHCYLQGAYQESVLLLSKALKdEQREKGLYINRGDCFFQLGNLIFAEADYQQAPALSPKDEGAHLRLGLLQEKLGFCERR 441
Cdd:COG0457 164 LELLEKLEAAALAALLAAALG-EAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLLLALALLLALRLAALALYQ 242
|
...
gi 1741462173 442 RRQ 444
Cdd:COG0457 243 YRA 245
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
272-527 |
6.56e-12 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 69.64 E-value: 6.56e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 272 DQAQEARQEAGILAVQGKLQRALQCINCAIENNPLDPSLFLFRGIMYRRLREFDSAVEDFLKALDMMTEHQEdlvqqaqc 351
Cdd:COG3914 76 LLAALLELAALLLQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAE-------- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 352 qlllayndfavhcylqgayqesvlllskalkdeqrekgLYINRGDCFFQLGNLIFAEADYQQAPALSPKDEGAHLRLGLL 431
Cdd:COG3914 148 --------------------------------------AYLNLGEALRRLGRLEEAIAALRRALELDPDNAEALNNLGNA 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 432 QEKLGfcerrrrQFQKTENHFSMAIQHNPQKPQYYLYRTRSRQLTQNIFGARQGVATVLLLDPKQPKLLPLMANLFPGLS 511
Cdd:COG3914 190 LQDLG-------RLEEAIAAYRRALELDPDNADAHSNLLFALRQACDWEVYDRFEELLAALARGPSELSPFALLYLPDDD 262
|
250
....*....|....*.
gi 1741462173 512 VEEVLNSQVAHLARLQ 527
Cdd:COG3914 263 PAELLALARAWAQLVA 278
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
87-295 |
4.20e-11 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 64.26 E-value: 4.20e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 87 YYHRGHQCLEQEDWEVAVLFFSRGLHLDSQLVEFYALRAEAYIQLCDFSSAAQNLRKAYSSQPENTDflerltlVLYLKG 166
Cdd:COG0457 11 YNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAE-------ALNNLG 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 167 QCLFEQCAFLDALNVFSQASELQPEKFCFRYRCMACLLALKRHRECLSFVTKEVEHGTTNADVYILRARLYNFFQQPSLC 246
Cdd:COG0457 84 LALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRYEEA 163
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1741462173 247 HRDLHSALLLDPKHPQAKVLLKVMVDQAQEARQEAGILAVQGKLQRALQ 295
Cdd:COG0457 164 LELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLA 212
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
352-496 |
6.65e-10 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 58.28 E-value: 6.65e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 352 QLLLAYNDFAVHCYLQGAYQESVLLLSKALKDEQREKGLYINRGDCFFQLGNLIFAEADYQQAPALSPKDEGAHLRLGLL 431
Cdd:COG4783 2 ACAEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLA 81
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1741462173 432 QEKLGfcerrrrQFQKTENHFSMAIQHNPQKPQYYLYRTRSRQLTQNIFGARQGVATVLLLDPKQ 496
Cdd:COG4783 82 LLKAG-------DYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPDD 139
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
314-461 |
4.49e-09 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 55.97 E-value: 4.49e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 314 RGIMYRRLREFDSAVEDFLKALDMMTEHQEdlvqqaqcqlllAYNDFAVHCYLQGAYQESVLLLSKALKDEQREKGLYIN 393
Cdd:COG4783 10 LAQALLLAGDYDEAEALLEKALELDPDNPE------------AFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLN 77
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1741462173 394 RGDCFFQLGNLIFAEADYQQAPALSPKDEGAHLRLGLLQEKLGfcerrrrQFQKTENHFSMAIQHNPQ 461
Cdd:COG4783 78 LGLALLKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALG-------RPDEAIAALEKALELDPD 138
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
87-295 |
7.26e-09 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 57.71 E-value: 7.26e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 87 YYHRGHQCLEQEDWEVAVLFFSRGLHLDSQLVEFYALRAEAYIQLCDFSSAAQNLRKAYSSQPENTDflerltlVLYLKG 166
Cdd:COG0457 45 LYNLGLAYLRLGRYEEALADYEQALELDPDDAEALNNLGLALQALGRYEEALEDYDKALELDPDDAE-------ALYNLG 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 167 QCLFEQCAFLDALNVFSQASELQPEKFCFRYRCMACLLALKRHRECLSFVTKEVEHGttNADVYILRARLYNFFQQPSLC 246
Cdd:COG0457 118 LALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRYEEALELLEKLEAAA--LAALLAAALGEAALALAAAEV 195
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1741462173 247 HRDLHSALLLDPKHPQAKVLLKVMVDQAQEARQEAGILAVQGKLQRALQ 295
Cdd:COG0457 196 LLALLLALEQALRKKLAILTLAALAELLLLALALLLALRLAALALYQYR 244
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
292-433 |
1.00e-08 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 54.63 E-value: 1.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 292 RALQCINCAIENNPLDPSLFLFRGIMYRRLREFDSAVEDFLKALDMMTEHQEDLVQQAQCQlllayndfavhcYLQGAYQ 371
Cdd:COG4235 1 EAIARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEAL------------LAAGDTE 68
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1741462173 372 ESVLLLSKALKDEQREKGLYINRGDCFFQLGNLIFAEADYQQAPALSPKDEGAHLRLGLLQE 433
Cdd:COG4235 69 EAEELLERALALDPDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAPARLLEASIAE 130
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
163-436 |
1.39e-08 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 57.05 E-value: 1.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 163 YLKGQCLFEQCAFLDALNVFSQASELQPEKFCFRYRCMACLLALKRHRECLSFVTKEVEHGTTNADVYILRARLYNFFQQ 242
Cdd:COG2956 12 YFKGLNYLLNGQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYLKAGL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 243 PSLCHRDLHSALLLDPKHPQAKVLLkvmvdqaqearqeAGILAVQGKLQRALQCINCAIENNPLDPSLFLFRGIMYRRLR 322
Cdd:COG2956 92 LDRAEELLEKLLELDPDDAEALRLL-------------AEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 323 EFDSAVEDFLKALDMMTEHQEDLVQQAQCQLLlayndfavhcylQGAYQESVLLLSKALKDEQREKGLYINRGDCFFQLG 402
Cdd:COG2956 159 DYDEAIEALEKALKLDPDCARALLLLAELYLE------------QGDYEEAIAALERALEQDPDYLPALPRLAELYEKLG 226
|
250 260 270
....*....|....*....|....*....|....
gi 1741462173 403 NLIFAEADYQQAPALSPKDEgAHLRLGLLQEKLG 436
Cdd:COG2956 227 DPEEALELLRKALELDPSDD-LLLALADLLERKE 259
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
83-211 |
4.90e-08 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 52.89 E-value: 4.90e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 83 KVREYYHRGHQCLEQEDWEVAVLFFSRGLHLDSQLVEFYALRAEAYIQLCDFSSAAQNLRKAYSSQPENTDFLERLtlvl 162
Cdd:COG4783 3 CAEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNL---- 78
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1741462173 163 ylkGQCLFEQCAFLDALNVFSQASELQPEKFCFRYRCMACLLALKRHRE 211
Cdd:COG4783 79 ---GLALLKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDE 124
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
85-237 |
6.17e-08 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 56.54 E-value: 6.17e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 85 REYYHRGHQCLEQEDWEVAVLFFSRGLHLDSQLVEFYALRAEAYIQLCDFSSAAQNLRKAYSSQPENTDflerltlVLYL 164
Cdd:COG3914 79 ALLELAALLLQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAE-------AYLN 151
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1741462173 165 KGQCLFEQCAFLDALNVFSQASELQPEKFCFRYRCMACLLALKRHRECLSFVTKEVEHGTTNADVYILRARLY 237
Cdd:COG3914 152 LGEALRRLGRLEEAIAALRRALELDPDNAEALNNLGNALQDLGRLEEAIAAYRRALELDPDNADAHSNLLFAL 224
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
226-350 |
7.14e-08 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 52.32 E-value: 7.14e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 226 NADVYILRARLYNFFQQPSLCHRDLHSALLLDPKHPQAKVLLkvmvdqaqearqeAGILAVQGKLQRALQCINCAIENNP 305
Cdd:COG4235 16 DAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDL-------------AEALLAAGDTEEAEELLERALALDP 82
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1741462173 306 LDPSLFLFRGIMYRRLREFDSAVEDFLKALDMMTEHQEDLVQQAQ 350
Cdd:COG4235 83 DNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAPARLLEAS 127
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
306-447 |
8.78e-08 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 52.66 E-value: 8.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 306 LDPSLFLFRGIMYRRLREFDSAVEDFLKALDMMTEHQEDLVQQAQCQLLLAYNDFAVHCYL-QGAYQESVLLLSKALKDE 384
Cdd:COG5010 5 EGFDRLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNkLGDFEESLALLEQALQLD 84
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1741462173 385 QREKGLYINRGDCFFQLGNLIFAEADYQQAPALSPKDEGAHLRLGLLQEKLGFCERRRRQFQK 447
Cdd:COG5010 85 PNNPELYYNLALLYSRSGDKDEAKEYYEKALALSPDNPNAYSNLAALLLSLGQDDEAKAALQR 147
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
227-365 |
2.29e-07 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 50.96 E-value: 2.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 227 ADVYILRARLYNFFQQPSLCHRDLHSALLLDPKHPQAKVLLkvmvdqaqearqeAGILAVQGKLQRALQCINCAIENNPL 306
Cdd:COG4783 4 AEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALL-------------GEILLQLGDLDEAIVLLHEALELDPD 70
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1741462173 307 DPSLFLFRGIMYRRLREFDSAVEDFLKALDMMTEHQEDLVQQAQCQLLLAYNDFAVHCY 365
Cdd:COG4783 71 EPEARLNLGLALLKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAAL 129
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
250-500 |
2.41e-07 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 55.09 E-value: 2.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 250 LHSALLLDPKHPQAKVLL-KVMVDQ--AQEARQE------------------AGILAVQGKLQRAL-QCINCAIENNPLD 307
Cdd:TIGR02917 45 LKNALQKDPNDAEARFLLgKIYLALgdYAAAEKElrkalslgypknqvlpllARAYLLQGKFQQVLdELPGKTLLDDEGA 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 308 PSLFLFRGIMYRRLREFDSAVEDFLKALDMMTEHQEDLVQQAQcqLLLAYNDFAvhcylqgayqESVLLLSKALKDEQRE 387
Cdd:TIGR02917 125 AELLALRGLAYLGLGQLELAQKSYEQALAIDPRSLYAKLGLAQ--LALAENRFD----------EARALIDEVLTADPGN 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 388 KGLYINRGDCFFQLGNLIFAEADYQQAPALSPKDEGAHLRLG--LLQEKlgfcerrrrQFQKTENHFSMAIQHNPQKPQY 465
Cdd:TIGR02917 193 VDALLLKGDLLLSLGNIELALAAYRKAIALRPNNIAVLLALAtiLIEAG---------EFEEAEKHADALLKKAPNSPLA 263
|
250 260 270
....*....|....*....|....*....|....*
gi 1741462173 466 YLYRTRSRQLTQNIFGARQGVATVLLLDPKQPKLL 500
Cdd:TIGR02917 264 HYLKALVDFQKKNYEDARETLQDALKSAPEYLPAL 298
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
121-569 |
2.54e-07 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 54.70 E-value: 2.54e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 121 YALRAEAYIQLC--DFSSAAQNLRKAYSSQPENTDFLERLTLVLYLKGQclFEQCAFLdalnvFSQASELQPEkfcfryr 198
Cdd:TIGR02917 330 QARRLLASIQLRlgRVDEAIATLSPALGLDPDDPAALSLLGEAYLALGD--FEKAAEY-----LAKATELDPE------- 395
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 199 cmacllalkrhreclsfvtkevehgttNADVYILRARLYNFFQQPSLCHRDLHSALLLDPKHPQAKVLLkvmVDQAQEAR 278
Cdd:TIGR02917 396 ---------------------------NAAARTQLGISKLSQGDPSEAIADLETAAQLDPELGRADLLL---ILSYLRSG 445
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 279 QEAGILAVQGKLQralqcincaiENNPLDPSLFLFRGIMYRRLREFDSAVEDFLKAL----------------DMMTEHQ 342
Cdd:TIGR02917 446 QFDKALAAAKKLE----------KKQPDNASLHNLLGAIYLGKGDLAKAREAFEKALsiepdffpaaanlariDIQEGNP 515
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 343 EDLVQQAQCQLLLAYNDFAVHCYLQGAY------QESVLLLSKALKDEQREKGLYINRGDCFFQLGNLIFAEADYQQAPA 416
Cdd:TIGR02917 516 DDAIQRFEKVLTIDPKNLRAILALAGLYlrtgneEEAVAWLEKAAELNPQEIEPALALAQYYLGKGQLKKALAILNEAAD 595
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 417 LSPKDEGAHLRLGLLQEKLGFCERRRRQFQKtenhfsmAIQHNPQKPQYYLYRTRSRQLTQNIFGARQGVATVLLLDPKQ 496
Cdd:TIGR02917 596 AAPDSPEAWLMLGRAQLAAGDLNKAVSSFKK-------LLALQPDSALALLLLADAYAVMKNYAKAITSLKRALELKPDN 668
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1741462173 497 PKLLPLMANLfpgLSVEEVLNSQVAHLARLQLERVVEHSLQAgtpqdIVGRLKERELERQRAARALQLSWKLE 569
Cdd:TIGR02917 669 TEAQIGLAQL---LLAAKRTESAKKIAKSLQKQHPKAALGFE-----LEGDLYLRQKDYPAAIQAYRKALKRA 733
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
226-358 |
2.84e-07 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 52.61 E-value: 2.84e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 226 NADVYILRARLYNFFQQPSLCHRDLHSALLLDPKHPQAkvllkvmvdqaqeARQEAGILAVQGKLQRALQCINCAIENNP 305
Cdd:COG4785 72 LAQLYYERGVAYDSLGDYDLAIADFDQALELDPDLAEA-------------YNNRGLAYLLLGDYDAALEDFDRALELDP 138
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1741462173 306 LDPSLFLFRGIMYRRLREFDSAVEDFLKALDMMTEHQEDLVQQAQCQLLLAYN 358
Cdd:COG4785 139 DYAYAYLNRGIALYYLGRYELAIADLEKALELDPNDPERALWLYLAERKLDPE 191
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
87-191 |
7.12e-07 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 49.42 E-value: 7.12e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 87 YYHRGHQCLEQEDWEVAVLFFSRGLHLDSQLVEFYALRAEAYIQLCDFSSAAQNLRKAYSSQPENTDFLERLTLVLYLKG 166
Cdd:COG4783 41 FALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALLKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALG 120
|
90 100
....*....|....*....|....*
gi 1741462173 167 QclfeqcaFLDALNVFSQASELQPE 191
Cdd:COG4783 121 R-------PDEAIAALEKALELDPD 138
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
341-494 |
7.19e-07 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 49.96 E-value: 7.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 341 HQEDLVQQAQCQLLLAYNDFAVHCYLQGAYQESVLLLSKALKDEQREKGLYINrgdCFFQLGNLIFAEADYQQAPALSPK 420
Cdd:COG5010 10 LPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDN---LYNKLGDFEESLALLEQALQLDPN 86
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1741462173 421 DEGAHLRLGLLQEKLGfcerrrrQFQKTENHFSMAIQHNPQKPQYYLYRTRSRQLTQNIFGARQGVATVLLLDP 494
Cdd:COG5010 87 NPELYYNLALLYSRSG-------DKDEAKEYYEKALALSPDNPNAYSNLAALLLSLGQDDEAKAALQRALGTSP 153
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
227-384 |
7.76e-07 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 49.96 E-value: 7.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 227 ADVYILRARLYNFFQQPSLCHRDLHSALLLDPKHPQAKVLLKVMVDQAQEARQEAGILAVQGKLQRALQCINCAIENNPL 306
Cdd:COG5010 7 FDRLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDPN 86
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1741462173 307 DPSLFLFRGIMYRRLREFDSAVEDFLKALDMMTEHQEdlvqqaqcqlllAYNDFAVHCYLQGAYQESVLLLSKALKDE 384
Cdd:COG5010 87 NPELYYNLALLYSRSGDKDEAKEYYEKALALSPDNPN------------AYSNLAALLLSLGQDDEAKAALQRALGTS 152
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
81-204 |
1.07e-06 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 52.69 E-value: 1.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 81 PLKVREYYHRGHQCLEQEDWEVAVLFFSRGLHLDSQLVEFYALRAEAYIQLCDFSSAAQNLRKAYSSQPENTDflerltl 160
Cdd:COG3914 109 PDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNLGEALRRLGRLEEAIAALRRALELDPDNAE------- 181
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1741462173 161 VLYLKGQCLFEQCAFLDALNVFSQASELQPEKFCFRYRCMACLL 204
Cdd:COG3914 182 ALNNLGNALQDLGRLEEAIAAYRRALELDPDNADAHSNLLFALR 225
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
115-260 |
1.17e-06 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 49.03 E-value: 1.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 115 SQLVEFYALRAEAYIQLCDFSSAAQNLRKAYSSQPENTDFLERLTLVLYLKGQclFEQcafldALNVFSQASELQPEKFC 194
Cdd:COG4783 1 AACAEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGD--LDE-----AIVLLHEALELDPDEPE 73
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1741462173 195 FRYRCMACLLALKRHRECLSFVTKEVEHGTTNADVYILRARLYNFFQQPSLCHRDLHSALLLDPKH 260
Cdd:COG4783 74 ARLNLGLALLKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPDD 139
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
95-190 |
2.42e-06 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 48.42 E-value: 2.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 95 LEQEDWEVAVLFFSRGLHLDSQLVEFYALRAEAYIQLCDFSSAAQNLRKAYSSQPENTDFLERLTLVLYLKGQclfeqca 174
Cdd:COG5010 65 NKLGDFEESLALLEQALQLDPNNPELYYNLALLYSRSGDKDEAKEYYEKALALSPDNPNAYSNLAALLLSLGQ------- 137
|
90
....*....|....*.
gi 1741462173 175 FLDALNVFSQASELQP 190
Cdd:COG5010 138 DDEAKAALQRALGTSP 153
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
90-591 |
2.67e-06 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 51.62 E-value: 2.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 90 RGHQCLEQEDWEVAVLFFSRGLHLDSQLVefYALRAEAYIQLC--DFSSAAQNLRKAYSSQPENTDflerltlVLYLKGQ 167
Cdd:TIGR02917 131 RGLAYLGLGQLELAQKSYEQALAIDPRSL--YAKLGLAQLALAenRFDEARALIDEVLTADPGNVD-------ALLLKGD 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 168 CLFEQCAFLDALNVFSQASELQPEKFCFRYRCMACLLALKRHRECLSFVTKEVEHGTTNADVYILRArLYNFFQQPSLCH 247
Cdd:TIGR02917 202 LLLSLGNIELALAAYRKAIALRPNNIAVLLALATILIEAGEFEEAEKHADALLKKAPNSPLAHYLKA-LVDFQKKNYEDA 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 248 RD-LHSALLLDP-----------------KHPQAKVLLKVMVDQAQEARQEAGILAV----QGKLQRALQCINCAIENNP 305
Cdd:TIGR02917 281 REtLQDALKSAPeylpalllagaseyqlgNLEQAYQYLNQILKYAPNSHQARRLLASiqlrLGRVDEAIATLSPALGLDP 360
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 306 LDPSLFLFRGIMYRRLREFD----------------------------------SAVEDFLKALDM-------------- 337
Cdd:TIGR02917 361 DDPAALSLLGEAYLALGDFEkaaeylakateldpenaaartqlgisklsqgdpsEAIADLETAAQLdpelgradlllils 440
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 338 -MTEHQEDLVQQAQCQLLLAYNDFA-VHCYLQGAYQESVlLLSKAlkDEQREKGLYINRGDCF---------FQLGNLIF 406
Cdd:TIGR02917 441 yLRSGQFDKALAAAKKLEKKQPDNAsLHNLLGAIYLGKG-DLAKA--REAFEKALSIEPDFFPaaanlaridIQEGNPDD 517
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 407 AEADYQQAPALSPKDEGAHLRLGLLQEKLGfcerrrrqfqKTENHFSM---AIQHNPQKPQYYL----YRTRSRQLTQNI 479
Cdd:TIGR02917 518 AIQRFEKVLTIDPKNLRAILALAGLYLRTG----------NEEEAVAWlekAAELNPQEIEPALalaqYYLGKGQLKKAL 587
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 480 FGARqgvaTVLLLDPKQPKLLPLMANLFPGLS------------VEEVLNSQVAHLARLQLERVVEHSLQAGTPQDIVGR 547
Cdd:TIGR02917 588 AILN----EAADAAPDSPEAWLMLGRAQLAAGdlnkavssfkklLALQPDSALALLLLADAYAVMKNYAKAITSLKRALE 663
|
570 580 590 600
....*....|....*....|....*....|....*....|....
gi 1741462173 548 LKERELERQRAARALQLSWKLEQPLFETSKELEATHQSLQAKPE 591
Cdd:TIGR02917 664 LKPDNTEAQIGLAQLLLAAKRTESAKKIAKSLQKQHPKAALGFE 707
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
681-785 |
2.68e-06 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 51.62 E-value: 2.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 681 LSHSPRKTKSTPG--HSQRPSRTEADQIQSQRPSRTEANQIQSQRPSRTEAALSQSQRPSRTEADQIQSQRPSRTEANQI 758
Cdd:PRK10263 736 LDDGPHEPLFTPIvePVQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQP 815
|
90 100
....*....|....*....|....*..
gi 1741462173 759 QSQRPSRTEAALSQSQRPSRTEADQIQ 785
Cdd:PRK10263 816 QYQQPQQPVAPQPQYQQPQQPVAPQPQ 842
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
81-191 |
2.81e-06 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 49.53 E-value: 2.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 81 PLKVREYYHRGHQCLEQEDWEVAVLFFSRGLHLDSQLVEFYALRAEAYIQLCDFSSAAQNLRKAYSSQPENTDFLERLTL 160
Cdd:COG4785 70 PDLAQLYYERGVAYDSLGDYDLAIADFDQALELDPDLAEAYNNRGLAYLLLGDYDAALEDFDRALELDPDYAYAYLNRGI 149
|
90 100 110
....*....|....*....|....*....|.
gi 1741462173 161 VLYLKGQclfeqcaFLDALNVFSQASELQPE 191
Cdd:COG4785 150 ALYYLGR-------YELAIADLEKALELDPN 173
|
|
| 3a0801s09 |
TIGR00990 |
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ... |
300-586 |
6.28e-06 |
|
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273380 [Multi-domain] Cd Length: 615 Bit Score: 49.98 E-value: 6.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 300 AIENNPLDPSLFL---FRGIMYRRLREFDSAVEDFLKALDMMTEHQEDLVQQAQCQLLL-----AYNDFavhcylqgayq 371
Cdd:TIGR00990 320 ALDLGKLGEKEAIalnLRGTFKCLKGKHLEALADLSKSIELDPRVTQSYIKRASMNLELgdpdkAEEDF----------- 388
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 372 esvlllSKALKDEQREKGLYINRGDCFFQLGNLIFAEADYQQAPALSPKDEGAHLRLGLLQEKLGfcerrrrQFQKTENH 451
Cdd:TIGR00990 389 ------DKALKLNSEDPDIYYHRAQLHFIKGEFAQAGKDYQKSIDLDPDFIFSHIQLGVTQYKEG-------SIASSMAT 455
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 452 FSMAIQHNPQKPQYYLYRTRSrQLTQNIFG-ARQGVATVLLLdpkQPKLLPLMANLFPGLSVEEVLNSQVAHLArlQLER 530
Cdd:TIGR00990 456 FRRCKKNFPEAPDVYNYYGEL-LLDQNKFDeAIEKFDTAIEL---EKETKPMYMNVLPLINKALALFQWKQDFI--EAEN 529
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1741462173 531 VVEHSLQAGTPQDI-VGRLKERELERQRAARALQlswkleqpLFETSKELEATHQSL 586
Cdd:TIGR00990 530 LCEKALIIDPECDIaVATMAQLLLQQGDVDEALK--------LFERAAELARTEGEL 578
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
87-191 |
8.22e-06 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 46.15 E-value: 8.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 87 YYHRGHQCLEQEDWEVAVLFFSRGLHLDSQLVEFYALRAEAYIQLCDFSSAAQNLRKAYSSQPENTDflerltlVLYLKG 166
Cdd:COG4235 20 WLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALALDPDNPE-------ALYLLG 92
|
90 100
....*....|....*....|....*
gi 1741462173 167 QCLFEQCAFLDALNVFSQASELQPE 191
Cdd:COG4235 93 LAAFQQGDYAEAIAAWQKLLALLPA 117
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
344-475 |
1.51e-05 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 45.38 E-value: 1.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 344 DLVQQAQCQLLLAYNDFAVHCYL------QGAYQESVLLLSKALKDEQREKGLYINRGDCFFQLGNLIFAEADYQQAPAL 417
Cdd:COG4235 1 EAIARLRQALAANPNDAEGWLLLgraylrLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALAL 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1741462173 418 SPKDEGAHLRLGLLQEKLGfcerrrrQFQKTENHFSMAIQHNPQKPQYYLYRTRSRQL 475
Cdd:COG4235 81 DPDNPEALYLLGLAAFQQG-------DYAEAIAAWQKLLALLPADAPARLLEASIAEA 131
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
255-419 |
1.58e-05 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 46.11 E-value: 1.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 255 LLDPKHPQAKVLLKVMVDQAQEARQEAGILAVQGKLQRALQCINCAIENNPLDPSLFLFRGIMYRRLREFDSAVEDFLKA 334
Cdd:COG5010 1 ARALEGFDRLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 335 LDMMTEHQEdlvqqaqcqlllAYNDFAVHCYLQGAYQESVLLLSKALKDEQREKGLYINRGDCFFQLGNLIFAEADYQQA 414
Cdd:COG5010 81 LQLDPNNPE------------LYYNLALLYSRSGDKDEAKEYYEKALALSPDNPNAYSNLAALLLSLGQDDEAKAALQRA 148
|
....*
gi 1741462173 415 PALSP 419
Cdd:COG5010 149 LGTSP 153
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
651-907 |
1.65e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 49.01 E-value: 1.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 651 STSTTVVTFSDSSPLRTQSSD--SGDKREDLSLSHSPRKTKSTPGHSQRPSRTEADQIQSQRPSRTEANQIQSQRPSRTE 728
Cdd:PHA03307 181 ETARAPSSPPAEPPPSTPPAAasPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRP 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 729 AALSQSQRPSRTEADQIQSQRPSRTEANQ-IQSQRPSRTEAALSQSQRPSRTEADQIQSRRPSRTEAALSQSQRPSRTEA 807
Cdd:PHA03307 261 APITLPTRIWEASGWNGPSSRPGPASSSSsPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAA 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 808 IwvqsqRPSRTEAnqiQSQRPSRTEANQIQSRRPSRTeaiqvQSQRPSRTEADPIQSRRPSRTEAALSH----SQRPSRT 883
Cdd:PHA03307 341 V-----SPGPSPS---RSPSPSRPPPPADPSSPRKRP-----RPSRAPSSPAASAGRPTRRRARAAVAGrarrRDATGRF 407
|
250 260
....*....|....*....|....
gi 1741462173 884 EAAWSPRRKLDKTKATQGSRQRLR 907
Cdd:PHA03307 408 PAGRPRPSPLDAGAASGAFYARYP 431
|
|
| ACL4-like |
cd24142 |
Assembly chaperone of ribosomal protein L4 and similar proteins; Assembly chaperone of RPL4 ... |
115-302 |
2.10e-05 |
|
Assembly chaperone of ribosomal protein L4 and similar proteins; Assembly chaperone of RPL4 (ACL4) acts as a chaperone for the L4 ribosomal subunit, encoded by RPL4A and RPL4B, and is required for hierarchical ribosome assembly. It is required for the soluble expression of newly synthesized RPL4 and for the protection of RPL4 from the Tom1-dependent cellular degradation machinery. ACL4 shields ribosomal protein L4 until timely release and insertion into the pre-ribosome is possible, once ribosomal protein L18 is present.
Pssm-ID: 467942 [Multi-domain] Cd Length: 306 Bit Score: 47.62 E-value: 2.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 115 SQLVEfyalRAEAYIQLCDFSSAAQNLRKAYSSQPENTDFLERLtlvlylkGQCLFEQCAFLDALNVFSQASELQPEKFC 194
Cdd:cd24142 1 DELLE----KAEELLDQGNFELALKFLQRALELEPNNVEALELL-------GEILLELGDVEEAREVLLRAIELDPDGGY 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 195 FRYRCMACLLALKrhrECLSFVTKEVEhgttnadvyILRARLYNFFQQPS---------------------------LCH 247
Cdd:cd24142 70 EKYLYLGQLSGGE---EALQYYEKGIE---------ILEEELQALQAASAeaeeeaeelkrklssalcalaeiymtdLCD 137
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1741462173 248 RD---------LHSALLLDPKHPQAKVLLkvmvdqaqearqeAGILAVQGKLQRALQCINCAIE 302
Cdd:cd24142 138 EPdaeqrceelITKALELDPTNPEALQTL-------------ASLRISQQRPDEAKEALRRSLE 188
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
748-837 |
3.15e-05 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 48.16 E-value: 3.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 748 QRPSRTEANQIQSQRPSRTEAALSQSQRPSRTEADQIQSRRPSRTEAALSQSQRPSRTEAIWVQSQRPSRTEANQIQSQR 827
Cdd:PRK10263 753 QQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQ 832
|
90
....*....|
gi 1741462173 828 PSRTEANQIQ 837
Cdd:PRK10263 833 PQQPVAPQPQ 842
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
709-798 |
3.23e-05 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 48.16 E-value: 3.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 709 QRPSRTEANQIQSQRPSRTEAALSQSQRPSRTEADQIQSQRPSRTEANQIQSQRPSRTEAALSQSQRPSRTEADQIQSRR 788
Cdd:PRK10263 753 QQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQ 832
|
90
....*....|
gi 1741462173 789 PSRTEAALSQ 798
Cdd:PRK10263 833 PQQPVAPQPQ 842
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
353-623 |
8.42e-05 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 45.49 E-value: 8.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 353 LLLAYNDF--AVHCYLQGAYQESVLLLSKALKDEQREKGLYINRGDCFFQLGNLIFAEADYQQAPALSPKDEGAHLRLGL 430
Cdd:COG2956 5 VAAALGWYfkGLNYLLNGQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQ 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 431 LQEKLGfcerrrrQFQKTENHFSMAIQHNPQKPQYYLYRTRSRQLTQNIFGARQGVATVLLLDPKQPKLLPLMANLFpgl 510
Cdd:COG2956 85 DYLKAG-------LLDRAEELLEKLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELY--- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 511 sveevLNSQVAHLARLQLERVVEHSLQAGTPQDIVGRLKERELERQRAARALQLSWKLEQPLFETSKELEATHQSLQAKP 590
Cdd:COG2956 155 -----LEQGDYDEAIEALEKALKLDPDCARALLLLAELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGDPE 229
|
250 260 270
....*....|....*....|....*....|...
gi 1741462173 591 EGPEEEAKApgekEKLEPAPSKERSLTDSYISQ 623
Cdd:COG2956 230 EALELLRKA----LELDPSDDLLLALADLLERK 258
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
318-420 |
9.86e-05 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 42.08 E-value: 9.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 318 YRRLREFDSAVEDFLKALDMMTEHQEdlvqqaqcqlllAYNDFAVHCYLQGAYQESvLLLSKALKDEQREKGLYINRGDC 397
Cdd:COG3063 2 YLKLGDLEEAEEYYEKALELDPDNAD------------ALNNLGLLLLEQGRYDEA-IALEKALKLDPNNAEALLNLAEL 68
|
90 100
....*....|....*....|...
gi 1741462173 398 FFQLGNLIFAEADYQQAPALSPK 420
Cdd:COG3063 69 LLELGDYDEALAYLERALELDPS 91
|
|
| TPR_11 |
pfam13414 |
TPR repeat; |
395-436 |
1.11e-04 |
|
TPR repeat;
Pssm-ID: 315977 [Multi-domain] Cd Length: 42 Bit Score: 40.53 E-value: 1.11e-04
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 1741462173 395 GDCFFQLGNLIFAEADYQQAPALSPKDEGAHLRLGLLQEKLG 436
Cdd:pfam13414 1 GDAYYEQGKYEEAIEAYKKALKLDPDNPEAYYNLGLAYYKLG 42
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
111-236 |
1.19e-04 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 43.07 E-value: 1.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 111 LHLDSQLVEFYALRAEAYIQLCDFSSAAQNLRKAYSSQPENTDFLERLTLVLYLKGQclfeqcaFLDALNVFSQASELQP 190
Cdd:COG4235 10 LAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGD-------TEEAEELLERALALDP 82
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1741462173 191 EKFCFRYRCMACLLALKRHRECLSFVTKEVEHGTTNADVYILRARL 236
Cdd:COG4235 83 DNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAPARLLEASI 128
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
86-436 |
1.22e-04 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 46.23 E-value: 1.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 86 EYYHRGHQCLEQEDWEVAVLFFSRGLHLDSQLVEFYALRAEAYIQLCDFSSAAQNLRKAYSSQPENTDFLERLTLVLYLK 165
Cdd:TIGR02917 24 ELIEAAKSYLQKNKYKAAIIQLKNALQKDPNDAEARFLLGKIYLALGDYAAAEKELRKALSLGYPKNQVLPLLARAYLLQ 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 166 GQclFEQcAFLDALNVFSQASELQPEkfCFRYRCMAcLLALKRHRECLSFVTKEVEHGTTNADVYILRARLYNFFQQPSL 245
Cdd:TIGR02917 104 GK--FQQ-VLDELPGKTLLDDEGAAE--LLALRGLA-YLGLGQLELAQKSYEQALAIDPRSLYAKLGLAQLALAENRFDE 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 246 CHRDLHSALLLDPKHPQAkVLLKvmvdqaqearqeAGILAVQGKLQRALQCINCAIENNPLDPSLFLFRGIMYRRLREFD 325
Cdd:TIGR02917 178 ARALIDEVLTADPGNVDA-LLLK------------GDLLLSLGNIELALAAYRKAIALRPNNIAVLLALATILIEAGEFE 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 326 SAvedflkaldmmTEHQEDLVQQAQCQLLLAYNDFAVHcYLQGAYQESVLLLSKALK--DEQREKGLYInrGDCFFQLGN 403
Cdd:TIGR02917 245 EA-----------EKHADALLKKAPNSPLAHYLKALVD-FQKKNYEDARETLQDALKsaPEYLPALLLA--GASEYQLGN 310
|
330 340 350
....*....|....*....|....*....|...
gi 1741462173 404 LIFAEADYQQAPALSPKDEGAHLRLGLLQEKLG 436
Cdd:TIGR02917 311 LEQAYQYLNQILKYAPNSHQARRLLASIQLRLG 343
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
722-811 |
1.24e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 46.23 E-value: 1.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 722 QRPSRTEAALSQSQRPSRTEADQIQSQRPSRTEANQIQSQRPSRTEAALSQSQRPSRTEADQIQSRRPSRTEAALSQSQR 801
Cdd:PRK10263 753 QQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQ 832
|
90
....*....|
gi 1741462173 802 PSRTEAIWVQ 811
Cdd:PRK10263 833 PQQPVAPQPQ 842
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
761-850 |
2.44e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 45.08 E-value: 2.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 761 QRPSRTEAALSQSQRPSRTEADQIQSRRPSRTEAALSQSQRPSRTEAIWVQSQRPSRTEANQIQSQRPSRTEANQIQSRR 840
Cdd:PRK10263 753 QQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQ 832
|
90
....*....|
gi 1741462173 841 PSRTEAIQVQ 850
Cdd:PRK10263 833 PQQPVAPQPQ 842
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
774-863 |
2.48e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 45.08 E-value: 2.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 774 QRPSRTEADQIQSRRPSRTEAALSQSQRPSRTEAIWVQSQRPSRTEANQIQSQRPSRTEANQIQSRRPSRTEAIQVQSQR 853
Cdd:PRK10263 753 QQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQ 832
|
90
....*....|
gi 1741462173 854 PSRTEADPIQ 863
Cdd:PRK10263 833 PQQPVAPQPQ 842
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
81-166 |
2.71e-04 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 43.95 E-value: 2.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 81 PLKVREYYHRGHQCLEQEDWEVAVLFFSRGLHLDSQLVEFYALRAEAYIQLCDFSSAAQNLRKAYSSQPENTDFLERLTL 160
Cdd:COG2956 175 PDCARALLLLAELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEEALELLRKALELDPSDDLLLALADL 254
|
....*.
gi 1741462173 161 VLYLKG 166
Cdd:COG2956 255 LERKEG 260
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
735-824 |
2.97e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 45.08 E-value: 2.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 735 QRPSRTEADQIQSQRPSRTEANQIQSQRPSRTEAALSQSQRPSRTEADQIQSRRPSRTEAALSQSQRPSRTEAIWVQSQR 814
Cdd:PRK10263 753 QQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQ 832
|
90
....*....|
gi 1741462173 815 PSRTEANQIQ 824
Cdd:PRK10263 833 PQQPVAPQPQ 842
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
372-506 |
3.28e-04 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 41.53 E-value: 3.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 372 ESVLLLSKALKDEQREKGLYINRGDCFFQLGNLIFAEADYQQAPALSPKDEGAHLRLGLLQEKLGfcerrrrQFQKTENH 451
Cdd:COG4235 1 EAIARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAG-------DTEEAEEL 73
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1741462173 452 FSMAIQHNPQKPQYYLYRTRSRQLTQNIFGARQGVATVLLLDPKQPKLLPLMANL 506
Cdd:COG4235 74 LERALALDPDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAPARLLEASI 128
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
397-495 |
3.34e-04 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 40.54 E-value: 3.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 397 CFFQLGNLIFAEADYQQAPALSPKDEGAHLRLGLLQEKLGfcerrrrQFQKTENhFSMAIQHNPQKPQYYLYRTRSRQLT 476
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQG-------RYDEAIA-LEKALKLDPNNAEALLNLAELLLEL 72
|
90
....*....|....*....
gi 1741462173 477 QNIFGARQGVATVLLLDPK 495
Cdd:COG3063 73 GDYDEALAYLERALELDPS 91
|
|
| 3a0801s09 |
TIGR00990 |
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ... |
247-464 |
5.68e-04 |
|
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273380 [Multi-domain] Cd Length: 615 Bit Score: 43.82 E-value: 5.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 247 HRDLHSALLLDPKHPQAKVllkvmvdqaqearQEAGILAVQGKLQRALQCINCAIENNPLDPSLFLFRGIMYRRLREFDS 326
Cdd:TIGR00990 351 LADLSKSIELDPRVTQSYI-------------KRASMNLELGDPDKAEEDFDKALKLNSEDPDIYYHRAQLHFIKGEFAQ 417
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 327 AVEDFLKALDMMTEHqedlvqqaqcqlLLAYNDFAVHCYLQGAYQESVLLLSKALKDEQREKGLYINRGDCFFQLGNLIF 406
Cdd:TIGR00990 418 AGKDYQKSIDLDPDF------------IFSHIQLGVTQYKEGSIASSMATFRRCKKNFPEAPDVYNYYGELLLDQNKFDE 485
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1741462173 407 AEADYQQAPALSPKDEGAHLRLGLLQEKLGFCERRRRQFQKTENHFSMAIQHNPQKPQ 464
Cdd:TIGR00990 486 AIEKFDTAIELEKETKPMYMNVLPLINKALALFQWKQDFIEAENLCEKALIIDPECDI 543
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
460-893 |
1.02e-03 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 43.15 E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 460 PQKPQYYLYRTRSRQLTQNIFGARQGVATVLLLDPKQPkllplmanlfPGLSVEEVLNSQVAHLARLQLERVVEHSLQAG 539
Cdd:PRK10263 381 PQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQ----------PYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAE 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 540 TPQDIVGRLKERELERQRAARALQLSWKLEQPLFETSKELEATHQSLQAKPEGP------EEEAKAPGEKEKLE------ 607
Cdd:PRK10263 451 EQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPARPplyyfeEVEEKRAREREQLAawyqpi 530
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 608 PAPSKERSLTDSYISQTSSGSVLGFRTTSTSETETSTVCQeygSTSTTVVTFSDSSPLRTQSSdSGDKREDLSLSHSPRK 687
Cdd:PRK10263 531 PEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKK---ATLATGAAATVAAPVFSLAN-SGGPRPQVKEGIGPQL 606
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 688 TKstPGHSQRPSRTE---------ADQIQSQRPSRTEANQIQSQRPSRTEAALSQSQRPSRTEADQIQSQRPSRTEANQI 758
Cdd:PRK10263 607 PR--PKRIRVPTRRElasygiklpSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDV 684
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 759 QSQRPSRTEAA---------LSQSQR--------------------PSRTEADQIQSRrPSRTEAALSQSQrPSRTEAIW 809
Cdd:PRK10263 685 PVNAEDADAAAeaelarqfaQTQQQRysgeqpaganpfslddfefsPMKALLDDGPHE-PLFTPIVEPVQQ-PQQPVAPQ 762
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 810 VQSQRPSRTEANQIQSQRPSRTEANQIQSRRPSRTEAIQVQSQRPSRTEADPIQSRRPSRTEAALSHSQRPsRTEAAWSP 889
Cdd:PRK10263 763 QQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQP-QQPVAPQP 841
|
....
gi 1741462173 890 RRKL 893
Cdd:PRK10263 842 QDTL 845
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
87-164 |
1.40e-03 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 41.44 E-value: 1.40e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1741462173 87 YYHRGHQCLEQEDWEVAVLFFSRGLHLDSQLVEFYALRAEAYIQLCDFSSAAQNLRKAYSSQPENTDflerLTLVLYL 164
Cdd:COG4785 110 YNNRGLAYLLLGDYDAALEDFDRALELDPDYAYAYLNRGIALYYLGRYELAIADLEKALELDPNDPE----RALWLYL 183
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
365-447 |
1.98e-03 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 38.82 E-value: 1.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 365 YLQGAYQESVLLLSKALK----DEQREKGLYiNRGDCFFQLGNLIFAEADYQQAPALSPKDE---GAHLRLGLLQEKLGF 437
Cdd:COG1729 4 LKAGDYDEAIAAFKAFLKrypnSPLAPDALY-WLGEAYYALGDYDEAAEAFEKLLKRYPDSPkapDALLKLGLSYLELGD 82
|
90
....*....|
gi 1741462173 438 CERRRRQFQK 447
Cdd:COG1729 83 YDKARATLEE 92
|
|
| PLN03088 |
PLN03088 |
SGT1, suppressor of G2 allele of SKP1; Provisional |
89-149 |
2.12e-03 |
|
SGT1, suppressor of G2 allele of SKP1; Provisional
Pssm-ID: 215568 [Multi-domain] Cd Length: 356 Bit Score: 41.70 E-value: 2.12e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1741462173 89 HRGHQCLEQEDWEVAVLFFSRGLHLDSQLVEFYALRAEAYIQLCDFSSAAQNLRKAYSSQP 149
Cdd:PLN03088 7 DKAKEAFVDDDFALAVDLYTQAIDLDPNNAELYADRAQANIKLGNFTEAVADANKAIELDP 67
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
287-382 |
2.31e-03 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 38.23 E-value: 2.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 287 QGKLQRALQCINCAIENNPLDPSLFLFRGIMYRRLREFDSAvEDFLKALDMMTEHQEdlvqqaqcqlllAYNDFAVHCYL 366
Cdd:COG3063 5 LGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEA-IALEKALKLDPNNAE------------ALLNLAELLLE 71
|
90
....*....|....*.
gi 1741462173 367 QGAYQESVLLLSKALK 382
Cdd:COG3063 72 LGDYDEALAYLERALE 87
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
352-414 |
2.31e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 37.75 E-value: 2.31e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1741462173 352 QLLLAYNDFAVHCYLQGAYQESVLLLSKALKDEQREKG--------LYINRGDCFFQLGNLIFAEADYQQA 414
Cdd:pfam13424 1 DVATALNNLAAVLRRLGRYDEALELLEKALEIARRLLGpdhpltatTLLNLGRLYLELGRYEEALELLERA 71
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
236-337 |
3.48e-03 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 37.84 E-value: 3.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 236 LYNFFQQPSLCHRDLHSALLLDPKHPQAKVLLkvmvdqaqearqeAGILAVQGKLQRALQcINCAIENNPLDPSLFLFRG 315
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPDNADALNNL-------------GLLLLEQGRYDEAIA-LEKALKLDPNNAEALLNLA 66
|
90 100
....*....|....*....|..
gi 1741462173 316 IMYRRLREFDSAVEDFLKALDM 337
Cdd:COG3063 67 ELLLELGDYDEALAYLERALEL 88
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
403-495 |
5.52e-03 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 39.51 E-value: 5.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 403 NLIFAEADYQQAPALS---PKDEGAHLRLGLLQEKLGfcerrrrQFQKTENHFSMAIQHNPQKPQYYLYRTRSRQLTQNI 479
Cdd:COG4785 51 AALAAAALAAERIDRAlalPDLAQLYYERGVAYDSLG-------DYDLAIADFDQALELDPDLAEAYNNRGLAYLLLGDY 123
|
90
....*....|....*.
gi 1741462173 480 FGARQGVATVLLLDPK 495
Cdd:COG4785 124 DAALEDFDRALELDPD 139
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
136-302 |
7.11e-03 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 39.13 E-value: 7.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 136 SAAQNLRKAYSSQPENTDFLERLTLVLYLKGQCLFEQCAFLDALNVFSQASELQPE-KFCFRYRCMAcLLALKRHRECLS 214
Cdd:COG4785 50 AAALAAAALAAERIDRALALPDLAQLYYERGVAYDSLGDYDLAIADFDQALELDPDlAEAYNNRGLA-YLLLGDYDAALE 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741462173 215 FVTKEVEHGTTNADVYILRARLYNFFQQPSLCHRDLHSALLLDPKHPQAKVLL-----KVMVDQAQEARQE--AGILAVQ 287
Cdd:COG4785 129 DFDRALELDPDYAYAYLNRGIALYYLGRYELAIADLEKALELDPNDPERALWLylaerKLDPEKALALLLEdwATAYLLQ 208
|
170
....*....|....*
gi 1741462173 288 GKLQRALQCINCAIE 302
Cdd:COG4785 209 GDTEEARELFKLALA 223
|
|
| ANAPC3 |
pfam12895 |
Anaphase-promoting complex, cyclosome, subunit 3; Apc3, otherwise known as Cdc27, is one of ... |
143-214 |
7.86e-03 |
|
Anaphase-promoting complex, cyclosome, subunit 3; Apc3, otherwise known as Cdc27, is one of the subunits of the anaphase-promoting complex or cyclosome. The anaphase-promoting complex is a multiprotein subunit E3 ubiquitin ligase complex that controls segregation of chromosomes and exit from mitosis in eukaryotes. The protein members of this family contain TPR repeats just as those of Apc7 do, and it appears that these TPR units bind the C-termini of the APC co-activators CDH1 and CDC20.
Pssm-ID: 463743 [Multi-domain] Cd Length: 82 Bit Score: 36.46 E-value: 7.86e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1741462173 143 KAYSSQPENTDFLerltlvlYLKGQCLFEQCAFLDALNVFSQASELQPEKFCfRYRCMACLLALKRHRECLS 214
Cdd:pfam12895 14 RLLAAEPESPEDA-------YLLAQCLFLNGQYKRAYELLRKAKLNGSSLGC-RYLFAQCLLKLKKYDEALD 77
|
|
| |
