|
Name |
Accession |
Description |
Interval |
E-value |
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
154-985 |
0e+00 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 993.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 154 LQTQLKEVLRENDLLRKDVEVKESKLSSSMNSIKTFWSPELKKERALRKDEASKITIWKEQYRVVQEENQHMQMTIQALQ 233
Cdd:pfam10174 1 LQAQLRDLQRENELLRRELDIKESKLGSSMNSIKTFWSPELKKERALRKEEAARISVLKEQYRVTQEENQHLQLTIQALQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 234 DELRIQRDLNQLFQQD--SSSRTGEPCVA--ELTEENFQRLHAEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESI 309
Cdd:pfam10174 81 DELRAQRDLNQLLQQDftTSPVDGEDKFStpELTEENFRRLQSEHERQAKELFLLRKTLEEMELRIETQKQTLGARDESI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 310 KKLLEMLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKENNMLREEMHRRFENAPDSAKTKALQTVIEMKDS 389
Cdd:pfam10174 161 KKLLEMLQSKGLPKKSGEEDWERTRRIAEAEMQLGHLEVLLDQKEKENIHLREELHRRNQLQPDPAKTKALQTVIEMKDT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 390 KISSMERGLRDLEEEIQMLKSNGALSTEEREEEMKQMEVYRSHSKFMKNKVEQLkeelsskdaqgeelkkraaglqsevf 469
Cdd:pfam10174 241 KISSLERNIRDLEDEVQMLKTNGLLHTEDREEEIKQMEVYKSHSKFMKNKIDQL-------------------------- 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 470 aigqvKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQ 549
Cdd:pfam10174 295 -----KQELSKKESELLALQTKLETLTNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQ 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 550 DMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKE 629
Cdd:pfam10174 370 DLTEEKSTLAGEIRDLKDMLDVKERKINVLQKKIENLQEQLRDKDKQLAGLKERVKSLQTDSSNTDTALTTLEEALSEKE 449
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 630 RTIERLKEQRDRDEREKQEEIDTYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQK 709
Cdd:pfam10174 450 RIIERLKEQREREDRERLEELESLKKENKDLKEKVSALQPELTEKESSLIDLKEHASSLASSGLKKDSKLKSLEIAVEQK 529
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 710 KEECLKMESQLKKAHEATLEARASPEMSDRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELE--- 786
Cdd:pfam10174 530 KEECSKLENQLKKAHNAEEAVRTNPEINDRIRLLEQEVARYKEESGKAQAEVERLLGILREVENEKNDKDKKIAELEslt 609
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 787 -RQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQlqdslrkkddrieeleealresvqitaeremvlaq 865
Cdd:pfam10174 610 lRQMKEQNKKVANIKHGQQEMKKKGAQLLEEARRREDNLADNSQQ----------------------------------- 654
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 866 eesartnaeKQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDANI 945
Cdd:pfam10174 655 ---------LQLEELMGALEKTRQELDATKARLSSTQQSLAEKDGHLTNLRAERRKQLEEILEMKQEALLAAISEKDANI 725
|
810 820 830 840
....*....|....*....|....*....|....*....|.
gi 1958768395 946 ALLELSSS-KKKTQEEVAALKREKDRLVQQLKQQTQNRMKL 985
Cdd:pfam10174 726 ALLELSSSkKKKTQEEVMALKREKDRLVHQLKQQTQNRMKL 766
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
398-977 |
2.70e-19 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 94.23 E-value: 2.70e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 398 LRDLEEEIQMLKSNGALSTEEREEEMKQMEVyrshskfMKNKVEQLKEELSSKDAQGEELKKRAAGLQSEvfaIGQVKQE 477
Cdd:COG1196 234 LRELEAELEELEAELEELEAELEELEAELAE-------LEAELEELRLELEELELELEEAQAEEYELLAE---LARLEQD 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 478 LSRKDTELLALQTKLETLTNQfsdskqhIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGT 557
Cdd:COG1196 304 IARLEERRRELEERLEELEEE-------LAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAE 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 558 QAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKE 637
Cdd:COG1196 377 AEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEE 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 638 QRDRDEREKQEEIDTYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLASSGLKKdsrlktlEIALEQKKEECLKME 717
Cdd:COG1196 457 EEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAAL-------LLAGLRGLAGAVAVL 529
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 718 SQLKKAHEATLEARASPEMSDRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVA 797
Cdd:COG1196 530 IGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLR 609
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 798 NLKHKEQVEKKkSAQMLEEARRREDSLSDSSQQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAQEESARTNAEKQV 877
Cdd:COG1196 610 EADARYYVLGD-TLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERL 688
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 878 EELLMAMEKVKQELESMKAklsstQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSskkkt 957
Cdd:COG1196 689 AEEELELEEALLAEEEEER-----ELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPE----- 758
|
570 580
....*....|....*....|
gi 1958768395 958 QEEVAALKREKDRLVQQLKQ 977
Cdd:COG1196 759 PPDLEELERELERLEREIEA 778
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
261-985 |
3.38e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 93.97 E-value: 3.38e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 261 ELTEENFQRL---HAEHERQAKELFLLRKTLEEMelrIETQKQTLNARDESIKKLLEMLQSKGLSAKATEEDHERTRRLA 337
Cdd:TIGR02168 182 ERTRENLDRLediLNELERQLKSLERQAEKAERY---KELKAELRELELALLVLRLEELREELEELQEELKEAEEELEEL 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 338 EAEMHVhhLESLLEQKEKENNMLREEMHrrfenapdsaktkALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSTE 417
Cdd:TIGR02168 259 TAELQE--LEEKLEELRLEVSELEEEIE-------------ELQKELYALANEISRLEQQKQILRERLANLERQLEELEA 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 418 EREEEMKQMEVYRSHSKFMKNKVEQLKEELSSKDAQGEELKKRAAGLQSevfAIGQVKQELSRKDTELLALQTKLETLTN 497
Cdd:TIGR02168 324 QLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELES---RLEELEEQLETLRSKVAQLELQIASLNN 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 498 QFSDSKQHIEVLKESLT-----AKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVK 572
Cdd:TIGR02168 401 EIERLEARLERLEDRRErlqqeIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAA 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 573 ERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSlQADTTNTDTALTTLEEALADKERTIE-----RLKEQRDRDEREKQ 647
Cdd:TIGR02168 481 ERELAQLQARLDSLERLQENLEGFSEGVKALLKN-QSGLSGILGVLSELISVDEGYEAAIEaalggRLQAVVVENLNAAK 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 648 EEIDTYKKDLKDLKEKVSLLQGDLSEKEASLLDLK---EHASSLASSGLKKDSRLK--------------TLEIALEQKK 710
Cdd:TIGR02168 560 KAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILkniEGFLGVAKDLVKFDPKLRkalsyllggvlvvdDLDNALELAK 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 711 EECLKM-----ESQLKKAHEATLEARASPEMSD-----RIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDK 780
Cdd:TIGR02168 640 KLRPGYrivtlDGDLVRPGGVITGGSAKTNSSIlerrrEIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRK 719
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 781 KIAELERQVKDQNKKVANLKHKEqvekkksaqmlEEARRREDSLSDSSQQLQDSLRKKDDRIEELEEALRESVQITAERE 860
Cdd:TIGR02168 720 ELEELSRQISALRKDLARLEAEV-----------EQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELE 788
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 861 MVLAQEESARTNAEKQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISE 940
Cdd:TIGR02168 789 AQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELI 868
|
730 740 750 760
....*....|....*....|....*....|....*....|....*
gi 1958768395 941 KDANIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKL 985
Cdd:TIGR02168 869 EELESELEALLNERASLEEALALLRSELEELSEELRELESKRSEL 913
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
413-971 |
1.53e-18 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 91.54 E-value: 1.53e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 413 ALSTEEREeemKQMEVYRSHSKFMKNKVEQLKEELSSKDAQGEELKKRAAGLQSEvfaIGQVKQELSRKDTELLALQTKL 492
Cdd:COG1196 217 ELKEELKE---LEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAE---LEELRLELEELELELEEAQAEE 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 493 ETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVK 572
Cdd:COG1196 291 YELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEA 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 573 ERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRD---RDEREKQEE 649
Cdd:COG1196 371 EAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEeeeEALEEAAEE 450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 650 IDTYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLASSGLKK-----------DSRLKTLEIALEQKKEECLKMES 718
Cdd:COG1196 451 EAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLleaeadyegflEGVKAALLLAGLRGLAGAVAVLI 530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 719 QLKKAHEATLEARASPEMSDRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDqnkkVAN 798
Cdd:COG1196 531 GVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDL----VAS 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 799 LKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAQEESARTNAEKQVE 878
Cdd:COG1196 607 DLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAE 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 879 ELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKTQ 958
Cdd:COG1196 687 RLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELE 766
|
570
....*....|...
gi 1958768395 959 EEVAALKREKDRL 971
Cdd:COG1196 767 RELERLEREIEAL 779
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
203-992 |
8.05e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 89.35 E-value: 8.05e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 203 DEASKITIWKEQYRVVQEENQHMQMTIQALQDELR-IQRDLNQLFQQdsssrtgepcvAELTEEnFQRLHAEHERQAKEL 281
Cdd:TIGR02168 162 EEAAGISKYKERRKETERKLERTRENLDRLEDILNeLERQLKSLERQ-----------AEKAER-YKELKAELRELELAL 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 282 FLLRktleemelrIETQKQTLNARDESIKKLLEMLQSKGLSAKATEEDHERTR-RLAEAEMHVHHLES-LLEQKEKENNM 359
Cdd:TIGR02168 230 LVLR---------LEELREELEELQEELKEAEEELEELTAELQELEEKLEELRlEVSELEEEIEELQKeLYALANEISRL 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 360 LREEMHRRFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSN-----GALSTEEREEEM---------KQ 425
Cdd:TIGR02168 301 EQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEElesleAELEELEAELEElesrleeleEQ 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 426 MEVYRSHSKFMKNKVEQLKEELSSKDAQGEELKKRAAGLQSEVFAIGQ---------VKQELSRKDTELLALQTKLETLT 496
Cdd:TIGR02168 381 LETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKkleeaelkeLQAELEELEEELEELQEELERLE 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 497 NQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETmLNKKTKQIQDMAEEKGtqaGEIHDLKDMLDVKER-- 574
Cdd:TIGR02168 461 EALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEG-FSEGVKALLKNQSGLS---GILGVLSELISVDEGye 536
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 575 --KVNVLQKKI-----ENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQ 647
Cdd:TIGR02168 537 aaIEAALGGRLqavvvENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRK 616
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 648 ------------EEIDTYKKDLKDLKEKVSL--LQGDLsekeaslldLKEHASSLASSGLKKDSRLKTlEIALEQKKEEC 713
Cdd:TIGR02168 617 alsyllggvlvvDDLDNALELAKKLRPGYRIvtLDGDL---------VRPGGVITGGSAKTNSSILER-RREIEELEEKI 686
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 714 LKMESQLKKAHEATLEARaspemsDRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQN 793
Cdd:TIGR02168 687 EELEEKIAELEKALAELR------KELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELE 760
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 794 KKVANLKHKEQvekkKSAQMLEEARRREDSLSDSSQQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAQEESARTNA 873
Cdd:TIGR02168 761 AEIEELEERLE----EAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAAT 836
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 874 EKQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSS 953
Cdd:TIGR02168 837 ERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRE 916
|
810 820 830
....*....|....*....|....*....|....*....
gi 1958768395 954 KKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYED 992
Cdd:TIGR02168 917 LEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEE 955
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
323-972 |
9.98e-18 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 88.97 E-value: 9.98e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 323 AKATEEDHERTRRLAEAEMHVHHLESLLEQKEKENN------MLREEMhRRFENAPDSAKTKALQTVIEMKDSKISSMER 396
Cdd:TIGR02169 173 EKALEELEEVEENIERLDLIIDEKRQQLERLRREREkaeryqALLKEK-REYEGYELLKEKEALERQKEAIERQLASLEE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 397 GLRDLEEEIQML-KSNGALSTEEREEEMKQMEVYRSHSKFMKNKVEQLKEELSSKDAQGEELKKRAAGLQSEV----FAI 471
Cdd:TIGR02169 252 ELEKLTEEISELeKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLakleAEI 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 472 GQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDM 551
Cdd:TIGR02169 332 DKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRL 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 552 AEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERT 631
Cdd:TIGR02169 412 QEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRE 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 632 IERLKEQRDRDEREKQEEIDTYKKDLKDLKEKVSLLQ--GDLSEKEASLLD------------------------LKEH- 684
Cdd:TIGR02169 492 LAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAqlGSVGERYATAIEvaagnrlnnvvveddavakeaielLKRRk 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 685 -------------ASSLASSGLKKDS------------------------------------------RLKTLEIALEQK 709
Cdd:TIGR02169 572 agratflplnkmrDERRDLSILSEDGvigfavdlvefdpkyepafkyvfgdtlvvedieaarrlmgkyRMVTLEGELFEK 651
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 710 KEECLKMESQLKKAHEATLEARAS-PEMSDRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQ 788
Cdd:TIGR02169 652 SGAMTGGSRAPRGGILFSRSEPAElQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQE 731
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 789 VKDQNKKVANLKHK---------------EQVEKKKSAQMLEEARRR------EDSLSDSS-QQLQDSLRKKDDRIEELE 846
Cdd:TIGR02169 732 EEKLKERLEELEEDlssleqeienvkselKELEARIEELEEDLHKLEealndlEARLSHSRiPEIQAELSKLEEEVSRIE 811
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 847 EALRESVQITAEREMVLAQEESARTNAEKQVEELLMAMEKVKQELESMKAKLSSTQQSLAEK-------ETHLTNLRAER 919
Cdd:TIGR02169 812 ARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELeaalrdlESRLGDLKKER 891
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|...
gi 1958768395 920 RKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKTQEEVAALKREKDRLV 972
Cdd:TIGR02169 892 DELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDE 944
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
289-994 |
4.25e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 87.03 E-value: 4.25e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 289 EEMELRIETQKQTLNARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAEMHVH--HLESLLEQKEkENNMLREEMHR 366
Cdd:TIGR02168 175 KETERKLERTRENLDRLEDILNELERQLKSLERQAEKAERYKELKAELRELELALLvlRLEELREELE-ELQEELKEAEE 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 367 RFENApdSAKTKALQTVIEMKDSKISSMERGLRDLEE-------EIQMLKSNGALSTEEREEEMKQMEVYRSHSKFMKNK 439
Cdd:TIGR02168 254 ELEEL--TAELQELEEKLEELRLEVSELEEEIEELQKelyalanEISRLEQQKQILRERLANLERQLEELEAQLEELESK 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 440 VEQLKEELSSKDAQGEELKKRAAGLQSEVFAIGQVKQELSRK----DTELLALQTKLETLTNQFSDSKQHIEVLKESLTA 515
Cdd:TIGR02168 332 LDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRleelEEQLETLRSKVAQLELQIASLNNEIERLEARLER 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 516 KEQRAAILQTEVDALRLRLEEKEtmlnkktkqIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEK 595
Cdd:TIGR02168 412 LEDRRERLQQEIEELLKKLEEAE---------LKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAER 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 596 QMSSLKERVKSLQADTTNTDTALTTLEEALADKER---TIERLKEQRDRDE-------------------REKQEEIDTY 653
Cdd:TIGR02168 483 ELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGlsgILGVLSELISVDEgyeaaieaalggrlqavvvENLNAAKKAI 562
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 654 KKDLKDLKEKVSLLQGD------LSEKEASLLDLKEHASSLASSGLKKDSRLK--------------TLEIALEQKKEEC 713
Cdd:TIGR02168 563 AFLKQNELGRVTFLPLDsikgteIQGNDREILKNIEGFLGVAKDLVKFDPKLRkalsyllggvlvvdDLDNALELAKKLR 642
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 714 LKM-----ESQLKKAHEATLEARASPEMSD-----RIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIA 783
Cdd:TIGR02168 643 PGYrivtlDGDLVRPGGVITGGSAKTNSSIlerrrEIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELE 722
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 784 ELERQVKDQNKKVANLKHKEQvekkksaqmleearrredslsdssqQLQDSLRKKDDRIEELEEALRESVQITAEREMVL 863
Cdd:TIGR02168 723 ELSRQISALRKDLARLEAEVE-------------------------QLEERIAQLSKELTELEAEIEELEERLEEAEEEL 777
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 864 AQEESARTNAEKQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDA 943
Cdd:TIGR02168 778 AEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESL 857
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|.
gi 1958768395 944 NIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDH 994
Cdd:TIGR02168 858 AAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELES 908
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
335-898 |
1.15e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 85.76 E-value: 1.15e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 335 RLAEAEMHVHHLESLLEQKEKENNMLREEmhrrfenapdSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGAL 414
Cdd:COG1196 223 KELEAELLLLKLRELEAELEELEAELEEL----------EAELEELEAELAELEAELEELRLELEELELELEEAQAEEYE 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 415 STEEREEEMKQMEVYRSHSKFMKNKVEQLKEELSSKDAQGEELKKRAAGLQSEVFAIgqvKQELSRKDTELLALQTKLET 494
Cdd:COG1196 293 LLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEA---EEELEEAEAELAEAEEALLE 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 495 LTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKER 574
Cdd:COG1196 370 AEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAE 449
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 575 KVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKE---RTIERLKEQRDRDEREKQEEID 651
Cdd:COG1196 450 EEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEgflEGVKAALLLAGLRGLAGAVAVL 529
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 652 TYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEATLEAR 731
Cdd:COG1196 530 IGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLR 609
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 732 ASPEMSDRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANLKHKEQVEKKKSA 811
Cdd:COG1196 610 EADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLA 689
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 812 QMLEEARRREDSLSDSSQQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAQEESARTNAEKQVEELLMAMEKVKQEL 891
Cdd:COG1196 690 EEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELEREL 769
|
....*..
gi 1958768395 892 ESMKAKL 898
Cdd:COG1196 770 ERLEREI 776
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
473-981 |
1.25e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 82.29 E-value: 1.25e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 473 QVKQELSRKDTELLALqtkletltnqfsdskqHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMA 552
Cdd:COG1196 217 ELKEELKELEAELLLL----------------KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELE 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 553 EEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTI 632
Cdd:COG1196 281 LELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAEL 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 633 ERLKEQRDRDER---EKQEEIDTYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQK 709
Cdd:COG1196 361 AEAEEALLEAEAelaEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEE 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 710 KEECLKMESQLKKAHEATLEARAspemsdRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAE-LERQ 788
Cdd:COG1196 441 EEALEEAAEEEAELEEEEEALLE------LLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGvKAAL 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 789 VKDQNKKVANLKHKEQVEKKKSAQMLEEA------RRREDSLSDSSQQLQDSLRKKD--------DRIEELEEALRESVQ 854
Cdd:COG1196 515 LLAGLRGLAGAVAVLIGVEAAYEAALEAAlaaalqNIVVEDDEVAAAAIEYLKAAKAgratflplDKIRARAALAAALAR 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 855 ITAEREMVLAQEESARTNAEKQVEELLMAMEKVKQELESMKAKLSST-QQSLAEKETHLTNLRAERRKHLEEVLEMKQEA 933
Cdd:COG1196 595 GAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTlAGRLREVTLEGEGGSAGGSLTGGSRRELLAAL 674
|
490 500 510 520
....*....|....*....|....*....|....*....|....*...
gi 1958768395 934 LLAAISEKDANIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQN 981
Cdd:COG1196 675 LEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELE 722
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
351-1086 |
1.98e-15 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 81.73 E-value: 1.98e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 351 EQKEKENNMLREEMHRRFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSTEE--REEEMKQMEV 428
Cdd:PTZ00121 1113 EARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAarKAEEVRKAEE 1192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 429 YRshskfmknKVEQLKEELSSKDAQGEELKKRAAGLQSEVFAIGQVKQELSRKDTELLALQTKL---ETLTNQFSDSKQH 505
Cdd:PTZ00121 1193 LR--------KAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEErnnEEIRKFEEARMAH 1264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 506 IEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGtqagEIHDLKDMLDVKERKVNVLQKKIEn 585
Cdd:PTZ00121 1265 FARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAK----KADEAKKKAEEAKKKADAAKKKAE- 1339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 586 lqEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEEIDtykkdlkdlkekvs 665
Cdd:PTZ00121 1340 --EAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEED-------------- 1403
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 666 llqgdlsEKEASLLDLKEHASSLASSGLKKDSRLKTLEiALEQKKEECLKMESQLKKAHEAtleaRASPEMSDRIQQler 745
Cdd:PTZ00121 1404 -------KKKADELKKAAAAKKKADEAKKKAEEKKKAD-EAKKKAEEAKKADEAKKKAEEA----KKAEEAKKKAEE--- 1468
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 746 emARYKDESSKAQTEVDRLLEILKEVEnekndKDKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLS 825
Cdd:PTZ00121 1469 --AKKADEAKKKAEEAKKADEAKKKAE-----EAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKK 1541
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 826 DSSQQLQDSLRK-----KDDRIEELEEALRESvqitAEREMVLAQEESARTNAEKQVEELLM---------AMEKVKQEL 891
Cdd:PTZ00121 1542 AEEKKKADELKKaeelkKAEEKKKAEEAKKAE----EDKNMALRKAEEAKKAEEARIEEVMKlyeeekkmkAEEAKKAEE 1617
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 892 ESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQE-----ALLAAISEKDANIA-LLELSSSKKKTQEEVAALK 965
Cdd:PTZ00121 1618 AKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEEnkikaAEEAKKAEEDKKKAeEAKKAEEDEKKAAEALKKE 1697
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 966 REKDRLVQQLKQQTQNRMKLMADNYEDDHFRSSRSNQTNHKPSPDQIIQPLLELDQNRSKlklYIGHLTALCHDRDPLIL 1045
Cdd:PTZ00121 1698 AEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKK---KIAHLKKEEEKKAEEIR 1774
|
730 740 750 760
....*....|....*....|....*....|....*....|.
gi 1958768395 1046 RGLTPPASYNADGEQAAWENELQKMTQEQLQNELEKVEGDN 1086
Cdd:PTZ00121 1775 KEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGK 1815
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
391-930 |
8.23e-14 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 76.26 E-value: 8.23e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 391 ISSMERGLRDLEEEIQMLKsngaLSTEEREEEMKQMEVYRSHSKFMKNKVEQLKEELSSKDAQGEELKKRAAGLQSEVFA 470
Cdd:PRK03918 157 LDDYENAYKNLGEVIKEIK----RRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKE 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 471 IGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILqTEVDALRLRLEEKETMLNKKTKQIQD 550
Cdd:PRK03918 233 LEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKEL-KELKEKAEEYIKLSEFYEEYLDELRE 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 551 MAEEKGTQAGEIHDLKDMLDVKERKVnvlqKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEAladKER 630
Cdd:PRK03918 312 IEKRLSRLEEEINGIEERIKELEEKE----ERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRL---TGL 384
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 631 TIERLKEQRDRDEREKQEeidtYKKDLKDLKEKVSLLQGDLSEKEASLLDLK---------------EHASSLASSGLKK 695
Cdd:PRK03918 385 TPEKLEKELEELEKAKEE----IEEEISKITARIGELKKEIKELKKAIEELKkakgkcpvcgrelteEHRKELLEEYTAE 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 696 DSRLKTLEIALEQKKEECLKMESQLKKAHEATLEARASPEMSDRIQQLEREMARYKDESSKAQTE--------------- 760
Cdd:PRK03918 461 LKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEeyeklkekliklkge 540
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 761 ---VDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQDSLRK 837
Cdd:PRK03918 541 iksLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKE 620
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 838 KDDRIEELEEALRESVQITAEREMVLAQ-EESARTNAEKQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLR 916
Cdd:PRK03918 621 LKKLEEELDKAFEELAETEKRLEELRKElEELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLK 700
|
570
....*....|....
gi 1958768395 917 AERRKHLEEVLEMK 930
Cdd:PRK03918 701 EELEEREKAKKELE 714
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
459-845 |
8.86e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 76.25 E-value: 8.86e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 459 KRAAGLQSEVFAIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKE 538
Cdd:TIGR02168 667 KTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLE 746
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 539 TMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTAL 618
Cdd:TIGR02168 747 ERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERL 826
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 619 TTLEEALADKERTIERLKEQRdrdeREKQEEIDTYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSR 698
Cdd:TIGR02168 827 ESLERRIAATERRLEDLEEQI----EELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEE 902
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 699 LKTLEIALEQKKEECLKMESQLKKAHEATLEARAspemsDRIQQLEREMARYKDEsskaqtevdrlleiLKEVENEKNDK 778
Cdd:TIGR02168 903 LRELESKRSELRRELEELREKLAQLELRLEGLEV-----RIDNLQERLSEEYSLT--------------LEEAEALENKI 963
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1958768395 779 DKKIAELERQVKDQNKKVA-----NLKHKEQVEKKKsaQMLEEARRREDSLSDSSQQLQDSLRKKDDRIEEL 845
Cdd:TIGR02168 964 EDDEEEARRRLKRLENKIKelgpvNLAAIEEYEELK--ERYDFLTAQKEDLTEAKETLEEAIEEIDREARER 1033
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
382-898 |
8.77e-13 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 72.75 E-value: 8.77e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 382 TVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSTEEREEEMKQMEVYRSHSKFMKNKVEQLKEELSSKDAQGE------ 455
Cdd:TIGR04523 204 SNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEqnnkki 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 456 -ELKKRAAGLQSEVFAIGQVKQELSRKD--TELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRL 532
Cdd:TIGR04523 284 kELEKQLNQLKSEISDLNNQKEQDWNKElkSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQR 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 533 RLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTT 612
Cdd:TIGR04523 364 ELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIK 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 613 NTDTALTTLEEALADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLKEKVSLLQGDLSEK---EASLLDLKEHASSLA 689
Cdd:TIGR04523 444 DLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKkelEEKVKDLTKKISSLK 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 690 SSGLKKDSRLKTLEIALEQKKEECLKMESQLKKaheATLEARASpEMSDRIQQLEREMARYKDESSKAQTEVDRLLEILK 769
Cdd:TIGR04523 524 EKIEKLESEKKEKESKISDLEDELNKDDFELKK---ENLEKEID-EKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKK 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 770 EVENEKNDKDKKIAELERQVKDQNKK-------VANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQDSLRKKDDRI 842
Cdd:TIGR04523 600 DLIKEIEEKEKKISSLEKELEKAKKEneklssiIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTKIDDII 679
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 1958768395 843 EELEEALRESVQITAER--EMVLAQEESARTNAEKQVEELLMAMEKVKQELESMKAKL 898
Cdd:TIGR04523 680 ELMKDWLKELSLHYKKYitRMIRIKDLPKLEEKYKEIEKELKKLDEFSKELENIIKNF 737
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
230-847 |
1.01e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 72.66 E-value: 1.01e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 230 QALQDELRiQRDLNQLFQQDsssrtgepcvaELTEENFQRLHAEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESI 309
Cdd:COG1196 216 RELKEELK-ELEAELLLLKL-----------RELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELEL 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 310 KKLLEMLQSKGLSAKATEEDHERTR-RLAEAEMHVHHLESLLEQKEKENNMLREEMHRRFENAPDSAKT-KALQTVIEMK 387
Cdd:COG1196 284 EEAQAEEYELLAELARLEQDIARLEeRRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEElEEAEAELAEA 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 388 DSKISSMERGLRDLEEEIQMLKSNGALSTEEREEEMKQMEVYRSHSKFMKNKVEQLKEELSSKDAQGEELKKRAAGLQSe 467
Cdd:COG1196 364 EEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEE- 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 468 vfAIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKK--- 544
Cdd:COG1196 443 --ALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAglr 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 545 ----TKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTT 620
Cdd:COG1196 521 glagAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAA 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 621 LEEALADKERTIERLKEQRD----RDEREKQEEIDTYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLASSGLKKD 696
Cdd:COG1196 601 VDLVASDLREADARYYVLGDtllgRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAE 680
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 697 SRLKTLEIALEQKKEECLKMESQLKKAHEATLEARASpemsDRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKN 776
Cdd:COG1196 681 LEELAERLAEEELELEEALLAEEEEERELAEAEEERL----EEELEEEALEEQLEAEREELLEELLEEEELLEEEALEEL 756
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1958768395 777 DKDKKIAELERQVKDQNKKVA-----NLKHKEQvekkksaqmLEEARRREDSLSDSSQQLQDSLRKKDDRIEELEE 847
Cdd:COG1196 757 PEPPDLEELERELERLEREIEalgpvNLLAIEE---------YEELEERYDFLSEQREDLEEARETLEEAIEEIDR 823
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
389-969 |
1.74e-12 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 71.59 E-value: 1.74e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 389 SKISSMERGLRDLEEEIQMLKSNGALSTEEREEEMKQMEVYRSHSKFMKNKVEQLKEELSSKDAQGEELKKRAAGLQSEV 468
Cdd:TIGR04523 96 DKINKLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENEL 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 469 F-----------AIGQVKQELSRKDTELLALQTKLE---TLTNQFSDSKQHIEVLKESLTAKEQRaailqtevdalrlrL 534
Cdd:TIGR04523 176 NllekeklniqkNIDKIKNKLLKLELLLSNLKKKIQknkSLESQISELKKQNNQLKDNIEKKQQE--------------I 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 535 EEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQ-----MSSLKERVKSLQA 609
Cdd:TIGR04523 242 NEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQkeqdwNKELKSELKNQEK 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 610 DTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEeidtykkdlkdlkekvslLQGDLSEKEASLLDLKEHASSLA 689
Cdd:TIGR04523 322 KLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSE------------------KQRELEEKQNEIEKLKKENQSYK 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 690 SSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEATlearaspemsdriQQLEREMARYKDESSKAQTEVDRLLEILK 769
Cdd:TIGR04523 384 QEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEK-------------ELLEKEIERLKETIIKNNSEIKDLTNQDS 450
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 770 EVENEKNDKDKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQDSLRKKDDRIEELEEAL 849
Cdd:TIGR04523 451 VKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLE 530
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 850 RESVQI-----TAEREMVLAQEESARTNAEKQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLE 924
Cdd:TIGR04523 531 SEKKEKeskisDLEDELNKDDFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEK 610
|
570 580 590 600
....*....|....*....|....*....|....*....|....*
gi 1958768395 925 EVLEMKQEALLAAISEKDANIALLELSSSKKKTQEEVAALKREKD 969
Cdd:TIGR04523 611 KISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIK 655
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
442-852 |
1.82e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 72.02 E-value: 1.82e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 442 QLKEELSSKDAQGEELKKRAAGLQsevfaigqvkQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAA 521
Cdd:TIGR02169 671 SEPAELQRLRERLEGLKRELSSLQ----------SELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLE 740
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 522 ILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDvkerkvnvlQKKIENLQEQLRDKEKQMSSLK 601
Cdd:TIGR02169 741 ELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLS---------HSRIPEIQAELSKLEEEVSRIE 811
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 602 ERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDrDEREKQEEIDTYKKDlkdlkekvslLQGDLSEKEASLLDL 681
Cdd:TIGR02169 812 ARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIK-SIEKEIENLNGKKEE----------LEEELEELEAALRDL 880
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 682 KEHASSLASSGLKKDSRLKTLEIALEQkkeecLKMESQLKKAHEATLEARASpEMSDRIQQLEREMARYKDESSKaqtev 761
Cdd:TIGR02169 881 ESRLGDLKKERDELEAQLRELERKIEE-----LEAQIEKKRKRLSELKAKLE-ALEEELSEIEDPKGEDEEIPEE----- 949
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 762 drlLEILKEVENEKNDKDKKIAELERqvkdqnkkvANLKHKEQvekkksaqmLEEARRREDSLSDSSQQLQDSLRKKDDR 841
Cdd:TIGR02169 950 ---ELSLEDVQAELQRVEEEIRALEP---------VNMLAIQE---------YEEVLKRLDELKEKRAKLEEERKAILER 1008
|
410
....*....|.
gi 1958768395 842 IEELEEALRES 852
Cdd:TIGR02169 1009 IEEYEKKKREV 1019
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
273-977 |
1.90e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 72.02 E-value: 1.90e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 273 EHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKgLSAKATEEDHERTRRLAEAEMHVHHLESLLEQ 352
Cdd:TIGR02169 234 ALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKK-IKDLGEEEQLRVKEKIGELEAEIASLERSIAE 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 353 KEKENNMLREEMhrrfenAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSTEEREEEMKQMEVYRSH 432
Cdd:TIGR02169 313 KERELEDAEERL------AKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDE 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 433 SKFMKNKVEQLKEELSSKDAQGEELKKRAAGLQSEvfaIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKES 512
Cdd:TIGR02169 387 LKDYREKLEKLKREINELKRELDRLQEELQRLSEE---LADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAAD 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 513 LTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQA-----------GEIHDLKDMLDVKERKV----- 576
Cdd:TIGR02169 464 LSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRaveevlkasiqGVHGTVAQLGSVGERYAtaiev 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 577 --------------NVLQKKIENLQE------------QLRDKEKQMSSLKE---------------------------- 602
Cdd:TIGR02169 544 aagnrlnnvvveddAVAKEAIELLKRrkagratflplnKMRDERRDLSILSEdgvigfavdlvefdpkyepafkyvfgdt 623
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 603 -------------------------------------RVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDER- 644
Cdd:TIGR02169 624 lvvedieaarrlmgkyrmvtlegelfeksgamtggsrAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENr 703
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 645 --EKQEEIDTYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLkk 722
Cdd:TIGR02169 704 ldELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEAL-- 781
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 723 aheATLEARASPEmsdRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANLKHK 802
Cdd:TIGR02169 782 ---NDLEARLSHS---RIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKE 855
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 803 EQVEKKKSAQMLEEARRREDSLSDSSQQLQDSLRKKDDRIEELEEALRESVQITAEREMvlaqeesartnAEKQVEELLM 882
Cdd:TIGR02169 856 IENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEK-----------KRKRLSELKA 924
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 883 AMEKVKQELESMKAKLSSTQQSLAEkETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKTQEEVA 962
Cdd:TIGR02169 925 KLEALEEELSEIEDPKGEDEEIPEE-ELSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERK 1003
|
810
....*....|....*
gi 1958768395 963 ALKREKDRLVQQLKQ 977
Cdd:TIGR02169 1004 AILERIEEYEKKKRE 1018
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
144-898 |
1.62e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 68.93 E-value: 1.62e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 144 RQARDNTIMDLQTQLKEVLRENDLLRKDVEVKESKLSSSMNSIKTFwSPELKKERALRKDEASKITIWKEQYRVVQEENQ 223
Cdd:TIGR02168 311 LANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESL-EAELEELEAELEELESRLEELEEQLETLRSKVA 389
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 224 HMQMTIQALQDELRIQRDLnqlfQQDSSSRtgepcVAELTEENFQRLHAEHERQAKELFLLRKTLEEMELRIETQKQTLN 303
Cdd:TIGR02168 390 QLELQIASLNNEIERLEAR----LERLEDR-----RERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLE 460
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 304 ARDESIKKLLEMLQSKGLSAKateedhertRRLAEAEMHVHHLESLLEQKEKENNMLREEMHRRFENAPDSAKTKALQTV 383
Cdd:TIGR02168 461 EALEELREELEEAEQALDAAE---------RELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISV 531
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 384 IEMKDSKISSmerglrDLEEEIQMLKSNGALSTEEREEEMKQMEVYR---------SHSKFMKNKVEQLKEE------LS 448
Cdd:TIGR02168 532 DEGYEAAIEA------ALGGRLQAVVVENLNAAKKAIAFLKQNELGRvtflpldsiKGTEIQGNDREILKNIegflgvAK 605
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 449 SKDAQGEELKKRAAGLQSEVFAIGQVKQ--ELSRKDTELLALQTK-LETLTNQFSDSKQHIEVlKESLTAKEQRAAILQT 525
Cdd:TIGR02168 606 DLVKFDPKLRKALSYLLGGVLVVDDLDNalELAKKLRPGYRIVTLdGDLVRPGGVITGGSAKT-NSSILERRREIEELEE 684
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 526 EVDALRLRLEEKETMLNKKTKQIQDMAEEkgtqageIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVK 605
Cdd:TIGR02168 685 KIEELEEKIAELEKALAELRKELEELEEE-------LEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELT 757
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 606 SLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEEIDTykkdlkdlkekvsllqgdLSEKEASLLDLKEHA 685
Cdd:TIGR02168 758 ELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREA------------------LDELRAELTLLNEEA 819
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 686 SSLASsglkkdsRLKTLEIALEQKKEECLKMESQLKkaheatlearaspEMSDRIQQLEREMARYKDESSKAQTEVDRLL 765
Cdd:TIGR02168 820 ANLRE-------RLESLERRIAATERRLEDLEEQIE-------------ELSEDIESLAAEIEELEELIEELESELEALL 879
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 766 EILKEVENEKNDKDKKIAELERQVKDQNKKVANLKHkeqvEKKKSAQMLEEARRREDSLsdssqqlqdslrkkDDRIEEL 845
Cdd:TIGR02168 880 NERASLEEALALLRSELEELSEELRELESKRSELRR----ELEELREKLAQLELRLEGL--------------EVRIDNL 941
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|...
gi 1958768395 846 EEALRESVQITAEremvlaqeesartNAEKQVEELLMAMEKVKQELESMKAKL 898
Cdd:TIGR02168 942 QERLSEEYSLTLE-------------EAEALENKIEDDEEEARRRLKRLENKI 981
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
261-907 |
5.32e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 67.01 E-value: 5.32e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 261 ELTEENFQRLHAEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKglsakaTEEDHERTRRLAEAE 340
Cdd:PRK03918 161 ENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPEL------REELEKLEKEVKELE 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 341 MHVHHLESLLEQKEKENNMLREEmhrrfenapdsaktkalqtviemkDSKISSMERGLRDLEEEIQMLKSNGALSTEERE 420
Cdd:PRK03918 235 ELKEEIEELEKELESLEGSKRKL------------------------EEKIRELEERIEELKKEIEELEEKVKELKELKE 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 421 EEmkqmEVYRSHSKFMKNKVEQLKeelsskdaqgeELKKRAAGLQSEVFAIGQVKQELSRKDTELLALQTKLETLTNQFS 500
Cdd:PRK03918 291 KA----EEYIKLSEFYEEYLDELR-----------EIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLE 355
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 501 DSKQHIEVLKESLTAKEQ----RAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDM---LDVKE 573
Cdd:PRK03918 356 ELEERHELYEEAKAKKEElerlKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAieeLKKAK 435
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 574 RKVNVLQKKI--ENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALAdKERTIERLKEQRD--RDEREKQEE 649
Cdd:PRK03918 436 GKCPVCGRELteEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLK-KESELIKLKELAEqlKELEEKLKK 514
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 650 IDtyKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLAssGLKKdsRLKTLEIALEQKKEECLKMESQLKKAHEATLE 729
Cdd:PRK03918 515 YN--LEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLE--ELKK--KLAELEKKLDELEEELAELLKELEELGFESVE 588
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 730 araspEMSDRIQQLEREMARYKdESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVanlkhkEQVEKKK 809
Cdd:PRK03918 589 -----ELEERLKELEPFYNEYL-ELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKEL------EELEKKY 656
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 810 SAQMLEEARRREDSLSDSSQQLQDSLRKKDDRIEELEEALREsvqitaeremvLAQEESARTNAEKQVEELLMAMEKVKQ 889
Cdd:PRK03918 657 SEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEK-----------LKEELEEREKAKKELEKLEKALERVEE 725
|
650
....*....|....*....
gi 1958768395 890 ELESMKA-KLSSTQQSLAE 907
Cdd:PRK03918 726 LREKVKKyKALLKERALSK 744
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
350-874 |
5.94e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 66.99 E-value: 5.94e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 350 LEQKEKEnnmLREEMHRRFENAPDSAKTK-ALQTVIEMKDSKISSMErglrDLEEEIQMLKSNGALSTEEREEemkqmev 428
Cdd:PRK02224 211 LESELAE---LDEEIERYEEQREQARETRdEADEVLEEHEERREELE----TLEAEIEDLRETIAETEREREE------- 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 429 yrshskfmknkveqLKEELSSKDAQGEELKKRAAGLQSEVfaigqvkqELSRKDTELLALQtkLETLTNQFSDSKQHIEV 508
Cdd:PRK02224 277 --------------LAEEVRDLRERLEELEEERDDLLAEA--------GLDDADAEAVEAR--REELEDRDEELRDRLEE 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 509 LKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQE 588
Cdd:PRK02224 333 CRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAED 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 589 QLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALA-----------DKERTIERLKEQRDRDErEKQEEIDTYKKDL 657
Cdd:PRK02224 413 FLEELREERDELREREAELEATLRTARERVEEAEALLEagkcpecgqpvEGSPHVETIEEDRERVE-ELEAELEDLEEEV 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 658 KDLKEKVSLLQgDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEATLEAR-ASPEM 736
Cdd:PRK02224 492 EEVEERLERAE-DLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEeEAEEA 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 737 SDRIQQLEREMARYKDESSKaqteVDRLLEILKEVEN------EKNDKDKKIAELERQVKDQNKkvANLKHKEQVEKKKS 810
Cdd:PRK02224 571 REEVAELNSKLAELKERIES----LERIRTLLAAIADaedeieRLREKREALAELNDERRERLA--EKRERKRELEAEFD 644
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958768395 811 AQMLEEARRREDSLSDSSQQLQDSLRKKDDR--------------IEELEEaLRESVQITAEREMVLaqeESARTNAE 874
Cdd:PRK02224 645 EARIEEAREDKERAEEYLEQVEEKLDELREErddlqaeigaveneLEELEE-LRERREALENRVEAL---EALYDEAE 718
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
491-1031 |
1.06e-10 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 66.22 E-value: 1.06e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 491 KLETLTNQFSDSKQHIE-VLKESLTAKEQ-RAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDM 568
Cdd:PRK02224 163 KLEEYRERASDARLGVErVLSDQRGSLDQlKAQIEEKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEV 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 569 LDVKERK---VNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALttlEEALADKERT---IERLKEQRDRD 642
Cdd:PRK02224 243 LEEHEERreeLETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEER---DDLLAEAGLDdadAEAVEARREEL 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 643 EREKQEeidtykkdlkdlkekvslLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLeialeqkKEECLKMESQLKK 722
Cdd:PRK02224 320 EDRDEE------------------LRDRLEECRVAAQAHNEEAESLREDADDLEERAEEL-------REEAAELESELEE 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 723 AHEATLEARaspemsDRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANLKH- 801
Cdd:PRK02224 375 AREAVEDRR------EEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEAl 448
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 802 ---------KEQVEKKKSAQMLEEARRREDSLSDSSQQLQD-------------SLRKKDDRIEELEEALRESVQITAER 859
Cdd:PRK02224 449 leagkcpecGQPVEGSPHVETIEEDRERVEELEAELEDLEEeveeveerleraeDLVEAEDRIERLEERREDLEELIAER 528
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 860 EMVLAQEESARTNAEKQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLrAERRKHLEEVlemkqEALLAAIS 939
Cdd:PRK02224 529 RETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAEL-KERIESLERI-----RTLLAAIA 602
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 940 EKDANIALLElssSKKKTQEEVAALKREKdrlvqqlKQQTQNRMKLMADNYEDDHFRSSRSNQTNHKPSPDQIIQPLLEL 1019
Cdd:PRK02224 603 DAEDEIERLR---EKREALAELNDERRER-------LAEKRERKRELEAEFDEARIEEAREDKERAEEYLEQVEEKLDEL 672
|
570
....*....|..
gi 1958768395 1020 DQNRSKLKLYIG 1031
Cdd:PRK02224 673 REERDDLQAEIG 684
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
150-901 |
3.44e-10 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 64.37 E-value: 3.44e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 150 TIMDLQTQLKEVLRENDLLrKDVEVKESKLSSSMNSIKTFWSPELKKERALRKDEASKITIWKEQYRVVQEENQHMQMTI 229
Cdd:pfam15921 111 SVIDLQTKLQEMQMERDAM-ADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEI 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 230 QALQDELRiQRDLNQLFQQDSSSRTGEPCVAELTEENFQRLHAEHERQAKELFLLRKTLE--------EMELRIETQK-- 299
Cdd:pfam15921 190 RSILVDFE-EASGKKIYEHDSMSTMHFRSLGSAISKILRELDTEISYLKGRIFPVEDQLEalksesqnKIELLLQQHQdr 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 300 --QTLNARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAE--MHVHHLESLLEQKEKENNMLREEmHRRFENAPDSA 375
Cdd:pfam15921 269 ieQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQnsMYMRQLSDLESTVSQLRSELREA-KRMYEDKIEEL 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 376 KTKALQTVIEMKDSKIS----SMERGlrDLEEEIQMLKSNgaLSTEEREEEMKQMEVYRSHSKFMKNK--VEQLKEELSS 449
Cdd:pfam15921 348 EKQLVLANSELTEARTErdqfSQESG--NLDDQLQKLLAD--LHKREKELSLEKEQNKRLWDRDTGNSitIDHLRRELDD 423
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 450 KDAQGEELKKRAAGLQSEvfAIGQVKQELSRKDTELLALQtKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDA 529
Cdd:pfam15921 424 RNMEVQRLEALLKAMKSE--CQGQMERQMAAIQGKNESLE-KVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSD 500
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 530 LRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDmldvKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQ- 608
Cdd:pfam15921 501 LTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKN----EGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTq 576
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 609 -ADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEeidtykkdlkdlkekvsllqGDLSEKEASLLDLKEHASS 687
Cdd:pfam15921 577 lVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKD--------------------AKIRELEARVSDLELEKVK 636
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 688 LASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEATLEARASpeMSDRIQQLEREMARYKDESSKAQTEVDRLLEI 767
Cdd:pfam15921 637 LVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRN--FRNKSEEMETTTNKLKMQLKSAQSELEQTRNT 714
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 768 LKEVENEKNDKDKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQDSLRKKDDRIEELeE 847
Cdd:pfam15921 715 LKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGEL-E 793
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....
gi 1958768395 848 ALRESVQITAERemvLAQEESARTNAEKQVEELLMAMEkvKQELESMKAKLSST 901
Cdd:pfam15921 794 VLRSQERRLKEK---VANMEVALDKASLQFAECQDIIQ--RQEQESVRLKLQHT 842
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
396-984 |
4.66e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 64.39 E-value: 4.66e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 396 RGLRDLEEEIQMLKSNGALSTEEREEEMKQMEVYRshskfmknKVEQLKEELSSKdaqGEELKKRAaglqSEVFAIGQVK 475
Cdd:PTZ00121 1070 EGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAK--------KTETGKAEEARK---AEEAKKKA----EDARKAEEAR 1134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 476 --QELSRKDTELLALQTKLETLTNQFSDSKQHIEVLK--ESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDM 551
Cdd:PTZ00121 1135 kaEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKaeDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKA 1214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 552 AE-EKGTQAGEIHDLKDMLDVKERKVNVLQ-KKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEAlaDKE 629
Cdd:PTZ00121 1215 EEaRKAEDAKKAEAVKKAEEAKKDAEEAKKaEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEK--KKA 1292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 630 RTIERLKEQRDRDEREKQEEIDTYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQK 709
Cdd:PTZ00121 1293 DEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKK 1372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 710 KEECLKMESQLKKAHEATLEARASPEMSDRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQV 789
Cdd:PTZ00121 1373 KEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKK 1452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 790 KDQNKKVANLKHKEQvEKKKSAQMLEEArrREDSLSDSSQQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAqEESA 869
Cdd:PTZ00121 1453 AEEAKKAEEAKKKAE-EAKKADEAKKKA--EEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKA-DEAK 1528
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 870 RTNAEKQVEELLMAMEKVK-------QELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEvlEMKQEALLAAISEKD 942
Cdd:PTZ00121 1529 KAEEAKKADEAKKAEEKKKadelkkaEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEE--ARIEEVMKLYEEEKK 1606
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 1958768395 943 ANIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMK 984
Cdd:PTZ00121 1607 MKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKK 1648
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
259-941 |
1.51e-09 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 62.29 E-value: 1.51e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 259 VAELTEENFQRLHAEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAE 338
Cdd:TIGR00618 181 LALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQ 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 339 AEMHVHHLESLLEQKEKENNMLREEMHRRFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSTEE 418
Cdd:TIGR00618 261 LLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSI 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 419 REEEMKQMEVYRSHSKFMKNKVEQL--KEELSSKDAQGEELKKraagLQSEVFAIGQVKQELSRKDTELLALQTKLETLT 496
Cdd:TIGR00618 341 EEQRRLLQTLHSQEIHIRDAHEVATsiREISCQQHTLTQHIHT----LQQQKTTLTQKLQSLCKELDILQREQATIDTRT 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 497 NQFSDSKQHIEVLKESLTAKEQRAAILQtevdalrLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKV 576
Cdd:TIGR00618 417 SAFRDLQGQLAHAKKQQELQQRYAELCA-------AAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKK 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 577 NVLQKKIENLQEQLRDKEKQMSSLKERVKSL------QADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEEI 650
Cdd:TIGR00618 490 AVVLARLLELQEEPCPLCGSCIHPNPARQDIdnpgplTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQ 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 651 DTYKKD--------------LKDLKEKVSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKM 716
Cdd:TIGR00618 570 QSFSILtqcdnrskedipnlQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALH 649
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 717 ESQL----KKAHEATLEARASPEMSDRIQQLEREMARYKDES------------SKAQTEVDRLLEILKEVENEKNDKDK 780
Cdd:TIGR00618 650 ALQLtltqERVREHALSIRVLPKELLASRQLALQKMQSEKEQltywkemlaqcqTLLRELETHIEEYDREFNEIENASSS 729
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 781 KIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQDSLRKKDDRIEELEEALRESVQITAEre 860
Cdd:TIGR00618 730 LGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAE-- 807
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 861 mvlaqeesARTNAEKQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLrAERRKHLEEVleMKQEALLAAISE 940
Cdd:TIGR00618 808 --------IGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKY-EECSKQLAQL--TQEQAKIIQLSD 876
|
.
gi 1958768395 941 K 941
Cdd:TIGR00618 877 K 877
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
737-977 |
1.73e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 60.93 E-value: 1.73e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 737 SDRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKvanlkhkeqvekkksaqmLEE 816
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQE------------------LAA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 817 ARRREDSLSDSSQQLQDSLRKKDDRIEELEEALRESVQITAErEMVLAQEESArtnaekQVEELLMAMEKVKQELESMKA 896
Cdd:COG4942 81 LEAELAELEKEIAELRAELEAQKEELAELLRALYRLGRQPPL-ALLLSPEDFL------DAVRRLQYLKYLAPARREQAE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 897 KLSSTQQSLAEKETHLTNLRAERRKHLEEvLEMKQEALLAAISEKDANIAllELSSSKKKTQEEVAALKREKDRLVQQLK 976
Cdd:COG4942 154 ELRADLAELAALRAELEAERAELEALLAE-LEEERAALEALKAERQKLLA--RLEKELAELAAELAELQQEAEELEALIA 230
|
.
gi 1958768395 977 Q 977
Cdd:COG4942 231 R 231
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
193-792 |
1.87e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 61.88 E-value: 1.87e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 193 ELKKERALRKDEASKITIWKEQYRVVQEENQHMQMTIQALQDELR-IQRDLNQLFQQDSSSRTGepcvAELTEENFQRLH 271
Cdd:COG1196 247 ELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYeLLAELARLEQDIARLEER----RRELEERLEELE 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 272 AEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKGLSAKATEED-HERTRRLAEAEMHVHHLESLL 350
Cdd:COG1196 323 EELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEElEELAEELLEALRAAAELAAQL 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 351 EQKEK--ENNMLREEMHRRFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSTEEREEEMKQMEV 428
Cdd:COG1196 403 EELEEaeEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAEL 482
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 429 YRSHSKfmKNKVEQLKEELSSKDAQGEELKKRAAGLQSEVFAIGQVKQELSRKDTELLALQTKLETLTNQF-----SDSK 503
Cdd:COG1196 483 LEELAE--AAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIvveddEVAA 560
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 504 QHIEVLKEsltAKEQRAAILQTEVDALRLRLEEKEtmlnkktkqiqdmaeekgtQAGEIHDLKDMLDVKERKVNVLQKKI 583
Cdd:COG1196 561 AAIEYLKA---AKAGRATFLPLDKIRARAALAAAL-------------------ARGAIGAAVDLVASDLREADARYYVL 618
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 584 ENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEEIDtykkDLKDLKEK 663
Cdd:COG1196 619 GDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAE----RLAEEELE 694
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 664 VSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEATLEARAspEMSDRIQQL 743
Cdd:COG1196 695 LEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLE--ELERELERL 772
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*.
gi 1958768395 744 EREMARY-------KDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQ 792
Cdd:COG1196 773 EREIEALgpvnllaIEEYEELEERYDFLSEQREDLEEARETLEEAIEEIDRETRER 828
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
452-648 |
5.90e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 59.39 E-value: 5.90e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 452 AQGEELKKRAAGLQSEVFAIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALR 531
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 532 LRLEEKETMLNKKTKQIQDMAEEKGTQ----AGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSL 607
Cdd:COG4942 97 AELEAQKEELAELLRALYRLGRQPPLAlllsPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAEL 176
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1958768395 608 QADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQE 648
Cdd:COG4942 177 EALLAELEEERAALEALKAERQKLLARLEKELAELAAELAE 217
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
193-987 |
1.50e-08 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 59.21 E-value: 1.50e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 193 ELKKERALRKDEASKITIWKEQYRVVQEENQHMQMTIQALQDELRIQRDLNQLFQQDSSS-------RTGEPCVAELTEE 265
Cdd:pfam02463 203 KEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKeeeklaqVLKENKEEEKEKK 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 266 NFQRLHAEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAEmhVHH 345
Cdd:pfam02463 283 LQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEE--EEE 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 346 LESLLEQKEKENNMLREEMHRRFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSTEEREEEMKQ 425
Cdd:pfam02463 361 LEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIE 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 426 MEvyRSHSKFMKNKVEQLKEELSSKDAQGEELKKRAAGLQSEVFAIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQH 505
Cdd:pfam02463 441 LK--QGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKD 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 506 IEVLKesLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIen 585
Cdd:pfam02463 519 GVGGR--IISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSI-- 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 586 lqeqlrdkekqmsSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLKEKVS 665
Cdd:pfam02463 595 -------------AVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEK 661
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 666 LLQGDLSEKEASLLDLKEHASSLASSglkkDSRLKTLEIALEQKKEECLKMESQLKKAHEATLEARASPEMSDRIQQLER 745
Cdd:pfam02463 662 SEVKASLSELTKELLEIQELQEKAES----ELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEE 737
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 746 EMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVAnlkhKEQVEKKKSAQMLEEARRREDSLS 825
Cdd:pfam02463 738 LKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVE----EEKEEKLKAQEEELRALEEELKEE 813
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 826 DSSQQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAQEESARTNAEKQVEELLmaMEKVKQELESMKAKLSSTQQSL 905
Cdd:pfam02463 814 AELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELL--QELLLKEEELEEQKLKDELESK 891
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 906 AEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKL 985
Cdd:pfam02463 892 EEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEE 971
|
..
gi 1958768395 986 MA 987
Cdd:pfam02463 972 LG 973
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
268-909 |
1.68e-08 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 58.90 E-value: 1.68e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 268 QRLHAEHERQAKELFLLRKTLEEMELRIETQK-QTLNARDESIKKL-LEMLQSKGLSAKATEEDHERTRRLAEAEMHVHH 345
Cdd:TIGR00606 464 QQLEGSSDRILELDQELRKAERELSKAEKNSLtETLKKEVKSLQNEkADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKD 543
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 346 LESLLEQKEKENNMLREEMhrrFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSTEEREEEMKQ 425
Cdd:TIGR00606 544 KMDKDEQIRKIKSRHSDEL---TSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQ 620
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 426 MEVYRSH------SKFMKNKVEQLKEELSSKDAQGEELKKRAA-------GLQSEVFAIGQVKQELSRKDTELLALQTKL 492
Cdd:TIGR00606 621 LSSYEDKlfdvcgSQDEESDLERLKEEIEKSSKQRAMLAGATAvysqfitQLTDENQSCCPVCQRVFQTEAELQEFISDL 700
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 493 ETLTNQFSDSKQHIEVLKESLTaKEQRAAILQTEVDALRLRLEEKE--TMLNKKTKQIQDMAEEKgTQAGEIHDLKDMLD 570
Cdd:TIGR00606 701 QSKLRLAPDKLKSTESELKKKE-KRRDEMLGLAPGRQSIIDLKEKEipELRNKLQKVNRDIQRLK-NDIEEQETLLGTIM 778
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 571 VKERKVNVLQKK---IENLQEQLRDKEKQMSSLKERVKSlqadttntdtalttleealADKERTIERLKEQRDrderEKQ 647
Cdd:TIGR00606 779 PEEESAKVCLTDvtiMERFQMELKDVERKIAQQAAKLQG-------------------SDLDRTVQQVNQEKQ----EKQ 835
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 648 EEIDTYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLASSGlkkdSRLKTLEIALEQKKEECLKMESQLKKAHEAT 727
Cdd:TIGR00606 836 HELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNL----QRRQQFEEQLVELSTEVQSLIREIKDAKEQD 911
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 728 LEARASPEmsDRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAE-LERQVKDQNKKVANLKHKEQVE 806
Cdd:TIGR00606 912 SPLETFLE--KDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDgKDDYLKQKETELNTVNAQLEEC 989
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 807 KKKSAQMLEEARRREDSLSDSSQQ---LQDSL--RKKDDRIEELEEALRE------SVQITAEREMVLAQEESARTNAEK 875
Cdd:TIGR00606 990 EKHQEKINEDMRLMRQDIDTQKIQerwLQDNLtlRKRENELKEVEEELKQhlkemgQMQVLQMKQEHQKLEENIDLIKRN 1069
|
650 660 670
....*....|....*....|....*....|....
gi 1958768395 876 QVeELLMAMEKVKQELESMKAKLSSTQQSLAEKE 909
Cdd:TIGR00606 1070 HV-LALGRQKGYEKEIKHFKKELREPQFRDAEEK 1102
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
277-600 |
1.93e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 58.91 E-value: 1.93e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 277 QAKELFLLRKTLEEMELRIETQKQTLNArdesIKKLLEMLQSKGLSAKATEEDHERTRRLAEaemhvhhlESLLEQKEKE 356
Cdd:TIGR02168 675 RRREIEELEEKIEELEEKIAELEKALAE----LRKELEELEEELEQLRKELEELSRQISALR--------KDLARLEAEV 742
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 357 NNMLREEMHRRFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQmlKSNGALSTEEREEEMKQMEVYRSHSKF- 435
Cdd:TIGR02168 743 EQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIE--QLKEELKALREALDELRAELTLLNEEAa 820
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 436 -MKNKVEQLKEELSSKDAQGEELKKRAAGLQSEvfaIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLT 514
Cdd:TIGR02168 821 nLRERLESLERRIAATERRLEDLEEQIEELSED---IESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELE 897
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 515 AKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDL-KDMLDVKERKVNVLQKKIENLQEQLRDK 593
Cdd:TIGR02168 898 ELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEySLTLEEAEALENKIEDDEEEARRRLKRL 977
|
....*..
gi 1958768395 594 EKQMSSL 600
Cdd:TIGR02168 978 ENKIKEL 984
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
268-977 |
1.96e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 58.98 E-value: 1.96e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 268 QRLHAEHERQAKELFLLRKT-------LEEMELRIETQKQTLNARDESIKKLLEMLQS---KGLSAKATEEDH------- 330
Cdd:pfam15921 92 RRLNESNELHEKQKFYLRQSvidlqtkLQEMQMERDAMADIRRRESQSQEDLRNQLQNtvhELEAAKCLKEDMledsntq 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 331 -ERTRRLAEA-EMHVHHLESLLEQKEKENNMLREEmHRRFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQML 408
Cdd:pfam15921 172 iEQLRKMMLShEGVLQEIRSILVDFEEASGKKIYE-HDSMSTMHFRSLGSAISKILRELDTEISYLKGRIFPVEDQLEAL 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 409 KSngalSTEEREEEMKQMEVYRSHSKFMKNKVE--QLKEELSSKDAQGEELKKRAAGLQSEVFAIGQV-KQELSRKDTEL 485
Cdd:pfam15921 251 KS----ESQNKIELLLQQHQDRIEQLISEHEVEitGLTEKASSARSQANSIQSQLEIIQEQARNQNSMyMRQLSDLESTV 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 486 LALQTKLETLTNQFSDSKQHIEV--------LKESLTAKEQ---RAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEE 554
Cdd:pfam15921 327 SQLRSELREAKRMYEDKIEELEKqlvlanseLTEARTERDQfsqESGNLDDQLQKLLADLHKREKELSLEKEQNKRLWDR 406
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 555 KGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDK-EKQMSSLKERVKSLQADTTNTdtalttleealADKERTIE 633
Cdd:pfam15921 407 DTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQmERQMAAIQGKNESLEKVSSLT-----------AQLESTKE 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 634 RLkeqrdrdeREKQEEIDTYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLASS---GLKKDSRLKTLEIALEQKK 710
Cdd:pfam15921 476 ML--------RKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRvdlKLQELQHLKNEGDHLRNVQ 547
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 711 EECLKMESQLKKAHEATLEARASPE-MSDRIQQLEREMARYKDESSKAQTEV-DRLLEiLKEVENEKNDKDKKIAELERQ 788
Cdd:pfam15921 548 TECEALKLQMAEKDKVIEILRQQIEnMTQLVGQHGRTAGAMQVEKAQLEKEInDRRLE-LQEFKILKDKKDAKIRELEAR 626
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 789 VKD---QNKKVANLKHKE----QVEKKKSAQMLEE---ARRREDSLSDSSQQLQDSLRKKDDRIEELEEALRESVQiTAE 858
Cdd:pfam15921 627 VSDlelEKVKLVNAGSERlravKDIKQERDQLLNEvktSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLK-SAQ 705
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 859 REmvLAQEESARTNAEKQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAI 938
Cdd:pfam15921 706 SE--LEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVAT 783
|
730 740 750
....*....|....*....|....*....|....*....
gi 1958768395 939 SEKDANIALLELSSSKKKTQEEVAALKREKDRLVQQLKQ 977
Cdd:pfam15921 784 EKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQFAE 822
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
272-893 |
1.98e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 59.00 E-value: 1.98e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 272 AEHERQAKELFL----LRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAemhvhhLE 347
Cdd:PTZ00121 1311 AEEAKKADEAKKkaeeAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADA------AK 1384
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 348 SLLEQKEKENNMLR--EEMHRRFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSTEEREEEMKQ 425
Cdd:PTZ00121 1385 KKAEEKKKADEAKKkaEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKK 1464
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 426 MEVYRSHSKFMKNKVEQLKEELSSKDaQGEELKKRAAGLQSevfaigqvKQELSRKDTELLALQTKLETLTNQFSDSKQH 505
Cdd:PTZ00121 1465 KAEEAKKADEAKKKAEEAKKADEAKK-KAEEAKKKADEAKK--------AAEAKKKADEAKKAEEAKKADEAKKAEEAKK 1535
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 506 IEVLKEsltAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDlKDMLDVKERKVNVLQKKIEN 585
Cdd:PTZ00121 1536 ADEAKK---AEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEE-ARIEEVMKLYEEEKKMKAEE 1611
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 586 LQ--EQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLKEK 663
Cdd:PTZ00121 1612 AKkaEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAA 1691
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 664 VSLLQGDLSEKEASLLDLKEhasslaSSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEatlEARASPEMSDRIQQL 743
Cdd:PTZ00121 1692 EALKKEAEEAKKAEELKKKE------AEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAE---EAKKDEEEKKKIAHL 1762
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 744 EREMARYKDESSKAQTEVDRlleilkevENEKNDKDKKIAELERQVKDQNKKVANLkhkeQVEKKKSAQMLEEARRREDS 823
Cdd:PTZ00121 1763 KKEEEKKAEEIRKEKEAVIE--------EELDEEDEKRRMEVDKKIKDIFDNFANI----IEGGKEGNLVINDSKEMEDS 1830
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 824 LSDSSQQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAQEESARTNAEKQVEELLMAMEKVKQELES 893
Cdd:PTZ00121 1831 AIKEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEADEIEKIDKDDIER 1900
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
380-796 |
2.75e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 58.11 E-value: 2.75e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 380 LQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSTEEREEEMKQMEVYRSHSKFMKNKVEQLKEELSSKDAQGEELKK 459
Cdd:TIGR04523 326 IQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEK 405
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 460 RAAGLQSEVFAIGQVKQELSRKDTELLALQTKLET----LTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLE 535
Cdd:TIGR04523 406 LNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSeikdLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLE 485
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 536 EKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSlqadttntd 615
Cdd:TIGR04523 486 QKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKK--------- 556
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 616 talTTLEEALADKERTIERLKEQRD---RDEREKQEEIDTYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLASSG 692
Cdd:TIGR04523 557 ---ENLEKEIDEKNKEIEELKQTQKslkKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSII 633
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 693 LKKDSRLKTLEIALEQKKEECLKMESqlkKAHEATLEARASPEMSDRIQQLereMARYKDESSK----------AQTEVD 762
Cdd:TIGR04523 634 KNIKSKKNKLKQEVKQIKETIKEIRN---KWPEIIKKIKESKTKIDDIIEL---MKDWLKELSLhykkyitrmiRIKDLP 707
|
410 420 430
....*....|....*....|....*....|....
gi 1958768395 763 RLLEILKEVENEKNDKDKKIAELERQVKDQNKKV 796
Cdd:TIGR04523 708 KLEEKYKEIEKELKKLDEFSKELENIIKNFNKKF 741
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
264-608 |
3.98e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 57.76 E-value: 3.98e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 264 EENFQRLHAEHERQAKELFLLRKTLEEMelriETQKQTLNARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAEmhv 343
Cdd:TIGR02168 683 EEKIEELEEKIAELEKALAELRKELEEL----EEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKE--- 755
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 344 hhLESLLEQKEKENNMLREEmhrRFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSTEEREEEM 423
Cdd:TIGR02168 756 --LTELEAEIEELEERLEEA---EEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLE 830
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 424 KQMEVYRSHSKFMKNKVEQLKEELSSKDAQGEELKKRAAGLQSEvfaIGQVKQELSRKDTELLALQTKLETLTNQFSDSK 503
Cdd:TIGR02168 831 RRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESE---LEALLNERASLEEALALLRSELEELSEELRELE 907
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 504 QHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKgtqageIHDLKDMLDVKERKVNVLQKKI 583
Cdd:TIGR02168 908 SKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEAL------ENKIEDDEEEARRRLKRLENKI 981
|
330 340 350
....*....|....*....|....*....|....*....
gi 1958768395 584 ENL--------------QEQLRDKEKQMSSLKERVKSLQ 608
Cdd:TIGR02168 982 KELgpvnlaaieeyeelKERYDFLTAQKEDLTEAKETLE 1020
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
390-1002 |
1.05e-07 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 56.59 E-value: 1.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 390 KISSMERGLRDLEEEIQMLKSngalSTEEREEEMKQMEVYRShsKFMKNKVEQLKEELSSKDAQGEELKKRAAGLQSEVF 469
Cdd:TIGR00606 256 EIEHNLSKIMKLDNEIKALKS----RKKQMEKDNSELELKME--KVFQGTDEQLNDLYHNHQRTVREKERELVDCQRELE 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 470 AIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKE-----QRAAILQTEVD-ALRLRLEEKETMLNK 543
Cdd:TIGR00606 330 KLNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLeldgfERGPFSERQIKnFHTLVIERQEDEAKT 409
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 544 KTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSL--------QADTTNTD 615
Cdd:TIGR00606 410 AAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRIleldqelrKAERELSK 489
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 616 TALTTLEEALADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLKEKVSLLQgDLSEKEASLLDLKEHASSLASSGLKK 695
Cdd:TIGR00606 490 AEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTK-DKMDKDEQIRKIKSRHSDELTSLLGY 568
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 696 DSRLKTLEIALEQKKEECLKMESQLKKaheatlearaspeMSDRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEK 775
Cdd:TIGR00606 569 FPNKKQLEDWLHSKSKEINQTRDRLAK-------------LNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQ 635
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 776 nDKDKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEAR----------RREDSLSDSSQQLQDSLRKKDDRIEEL 845
Cdd:TIGR00606 636 -DEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQsccpvcqrvfQTEAELQEFISDLQSKLRLAPDKLKST 714
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 846 EEALResvQITAEREMVLAQEESARTNAEKQVEELlmamEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKH--- 922
Cdd:TIGR00606 715 ESELK---KKEKRRDEMLGLAPGRQSIIDLKEKEI----PELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAkvc 787
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 923 LEEVLEMKQ-EALLAAISEKDANIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFRSSRSN 1001
Cdd:TIGR00606 788 LTDVTIMERfQMELKDVERKIAQQAAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTN 867
|
.
gi 1958768395 1002 Q 1002
Cdd:TIGR00606 868 E 868
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
738-963 |
2.95e-07 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 54.07 E-value: 2.95e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 738 DRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEA 817
Cdd:COG3883 16 PQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARAL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 818 RRREDSLSD-----SSQQLQDSLrkkdDRIEELEEALRESVQITAEREMVLAQEESARTNAEKQVEELlmamEKVKQELE 892
Cdd:COG3883 96 YRSGGSVSYldvllGSESFSDFL----DRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAEL----EALKAELE 167
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958768395 893 SMKAKLsstQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKTQEEVAA 963
Cdd:COG3883 168 AAKAEL---EAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAA 235
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
398-824 |
4.78e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 54.00 E-value: 4.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 398 LRDLEEEIQMLKSNGALSTEEREEEMKQMEVYRSHSKFMKNKVEQLKEELSSKDAQGEELKKRAAGLQSEVFAIGQVKQe 477
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ- 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 478 LSRKDTELLALQTKLETLTNQFSDSKQHIEVLKEsltaKEQRAAILQTEVDALRLRLEEKETMLNKKT-KQIQDMAEEKG 556
Cdd:COG4717 127 LLPLYQELEALEAELAELPERLEELEERLEELRE----LEEELEELEAELAELQEELEELLEQLSLATeEELQDLAEELE 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 557 TQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVK--------SLQADTTNTDTALTTLEEALADK 628
Cdd:COG4717 203 ELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLlliaaallALLGLGGSLLSLILTIAGVLFLV 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 629 ERTIERLKEQRDRDEREKQEEIDTYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQ 708
Cdd:COG4717 283 LGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEE 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 709 KKEECLKMESQ--LKKAHEATLEA-RASPEMSDRIQQLEREMARYKDESSKAQTEVDRLLEIL--KEVENEKNDKDKKIA 783
Cdd:COG4717 363 LQLEELEQEIAalLAEAGVEDEEElRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALdeEELEEELEELEEELE 442
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 1958768395 784 ELERQVKDQNKKVANLKHkeQVEKKKSAQMLEEARRREDSL 824
Cdd:COG4717 443 ELEEELEELREELAELEA--ELEQLEEDGELAELLQELEEL 481
|
|
| RBD-FIP |
pfam09457 |
FIP domain; The FIP domain is the Rab11-binding domain (RBD) at the C-terminus of a family of ... |
1071-1111 |
5.30e-07 |
|
FIP domain; The FIP domain is the Rab11-binding domain (RBD) at the C-terminus of a family of Rab11-interacting proteins (FIPs). The Rab proteins constitute the largest family of small GTPases (>60 members in mammals). Among them Rab11 is a well characterized regulator of endocytic and recycling pathways. Rab11 associates with a broad range of post-Golgi organelles, including recycling endosomes.
Pssm-ID: 462805 [Multi-domain] Cd Length: 41 Bit Score: 46.95 E-value: 5.30e-07
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 1958768395 1071 TQEQLQNELEKVEGDNAELQEFANTILQQIADHCPDILEQV 1111
Cdd:pfam09457 1 SRDELQDALQKQEEENRRLEDYIDNILLRIMEHNPSILEVP 41
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
493-987 |
8.97e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 53.20 E-value: 8.97e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 493 ETLTNQFSDSKQHIEVLKeslTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQageIHDLKDMLDVK 572
Cdd:pfam15921 141 EDLRNQLQNTVHELEAAK---CLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKK---IYEHDSMSTMH 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 573 ERKVNVLQKKIenlqeqLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALadkertierLKEQRDRDEREkqeeidt 652
Cdd:pfam15921 215 FRSLGSAISKI------LRELDTEISYLKGRIFPVEDQLEALKSESQNKIELL---------LQQHQDRIEQL------- 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 653 ykkdlkdlkekvsllqgdLSEKEASLLDLKEHASSLASsglKKDSRLKTLEIALEQKKEECLKMESQLKKAHEATLEAR- 731
Cdd:pfam15921 273 ------------------ISEHEVEITGLTEKASSARS---QANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRs 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 732 ----ASPEMSDRIQQLEREMARYKDESSKAQTEVDRLLEilkEVENEKNDKDKKIAELERQVKDQNkkVANLKHKEQVEK 807
Cdd:pfam15921 332 elreAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQ---ESGNLDDQLQKLLADLHKREKELS--LEKEQNKRLWDR 406
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 808 KKSAQMLEEARRREdsLSDSSQQLQdslrkkddRIEELEEALRESVQITAEREM---------------VLAQEESARTN 872
Cdd:pfam15921 407 DTGNSITIDHLRRE--LDDRNMEVQ--------RLEALLKAMKSECQGQMERQMaaiqgkneslekvssLTAQLESTKEM 476
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 873 AEKQVEELL---MAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEAllaaisekdanialle 949
Cdd:pfam15921 477 LRKVVEELTakkMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEG---------------- 540
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 1958768395 950 lsSSKKKTQEEVAALK---REKDRLVQQLKQQTQNRMKLMA 987
Cdd:pfam15921 541 --DHLRNVQTECEALKlqmAEKDKVIEILRQQIENMTQLVG 579
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
176-641 |
1.03e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 53.12 E-value: 1.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 176 ESKLSSSMNSIKTFwspELKKERAL-RKDEASKITIWKEQYR----VVQEENQHMQMTI-------QALQDELRIQRDLN 243
Cdd:PRK02224 212 ESELAELDEEIERY---EEQREQAReTRDEADEVLEEHEERReeleTLEAEIEDLRETIaetererEELAEEVRDLRERL 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 244 QLFQQDSSSRTGEpcvAELTEENFQRLHAEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEmlQSKGLSA 323
Cdd:PRK02224 289 EELEEERDDLLAE---AGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEE--RAEELRE 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 324 KATEEDHErtrrLAEAEMHVHHLESLLEQKEKENNMLREemhrRFENAPDS--AKTKALQTVIEMKD---SKISSMERGL 398
Cdd:PRK02224 364 EAAELESE----LEEAREAVEDRREEIEELEEEIEELRE----RFGDAPVDlgNAEDFLEELREERDelrEREAELEATL 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 399 RDLEEEIQmlkSNGALSTEEREEEMKQMEVYRSHSKFM---KNKVEQLKEELSSKDAQGEELKKRAAGLqsevfaigqvk 475
Cdd:PRK02224 436 RTARERVE---EAEALLEAGKCPECGQPVEGSPHVETIeedRERVEELEAELEDLEEEVEEVEERLERA----------- 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 476 qelsrkdTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEK 555
Cdd:PRK02224 502 -------EDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEV 574
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 556 GTQAGEIHDLKDMLDVKERKVNV-------------LQKKIENLQEQLRDKEKQMSSLKERVKSLQADT-----TNTDTA 617
Cdd:PRK02224 575 AELNSKLAELKERIESLERIRTLlaaiadaedeierLREKREALAELNDERRERLAEKRERKRELEAEFdeariEEARED 654
|
490 500
....*....|....*....|....
gi 1958768395 618 LTTLEEALADKERTIERLKEQRDR 641
Cdd:PRK02224 655 KERAEEYLEQVEEKLDELREERDD 678
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
438-919 |
1.07e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.00 E-value: 1.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 438 NKVEQLKEELSSKDAQ--GEELKKRAAGLQSEvfaIGQVKQELSRKDTELLALQTKLETLTNQFSDS--------KQHIE 507
Cdd:COG4913 272 AELEYLRAALRLWFAQrrLELLEAELEELRAE---LARLEAELERLEARLDALREELDELEAQIRGNggdrleqlEREIE 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 508 VLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKvnvlqkkienLQ 587
Cdd:COG4913 349 RLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRD----------LR 418
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 588 EQLRDKEKQMSSLKERVKS----LQADTTNTDTALTTLEEAL---------ADKERT----IERL-----------KEQR 639
Cdd:COG4913 419 RELRELEAEIASLERRKSNiparLLALRDALAEALGLDEAELpfvgelievRPEEERwrgaIERVlggfaltllvpPEHY 498
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 640 DR-----DEREKQEEIDTYK-KDLKDLKEKVSLLQGDLSEK------------EASLL------------DLKEHASSLA 689
Cdd:COG4913 499 AAalrwvNRLHLRGRLVYERvRTGLPDPERPRLDPDSLAGKldfkphpfrawlEAELGrrfdyvcvdspeELRRHPRAIT 578
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 690 SSGLKKDS------------------------RLKTLEIALEQKKEECLKMESQLKKAHEatlEARASPEMSDRIQQLEr 745
Cdd:COG4913 579 RAGQVKGNgtrhekddrrrirsryvlgfdnraKLAALEAELAELEEELAEAEERLEALEA---ELDALQERREALQRLA- 654
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 746 EMARYKDESSKAQTEVDRLLEILKEVENEKNDkdkkIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLS 825
Cdd:COG4913 655 EYSWDEIDVASAEREIAELEAELERLDASSDD----LAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELD 730
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 826 DSSQQLQD-SLRKKDDRIEELEEALRESVQITAEREMVLAQEES---ARTNAEKQVEELLMAMEKVKQELESMKAKLSST 901
Cdd:COG4913 731 ELQDRLEAaEDLARLELRALLEERFAAALGDAVERELRENLEERidaLRARLNRAEEELERAMRAFNREWPAETADLDAD 810
|
570
....*....|....*...
gi 1958768395 902 QQSLAEKETHLTNLRAER 919
Cdd:COG4913 811 LESLPEYLALLDRLEEDG 828
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
388-761 |
1.13e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 53.15 E-value: 1.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 388 DSKIssmERGLRDLEEEIQMLKSNGALsTEEREEEMKQMEVYRSHskfmKNKVEQLKEELsskdaQGEELKKRAAGLQSE 467
Cdd:TIGR02169 169 DRKK---EKALEELEEVEENIERLDLI-IDEKRQQLERLRREREK----AERYQALLKEK-----REYEGYELLKEKEAL 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 468 VFAIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAK-EQRAAILQTEVDALRLRLEEKETMLNKKTK 546
Cdd:TIGR02169 236 ERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLgEEEQLRVKEKIGELEAEIASLERSIAEKER 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 547 QIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALA 626
Cdd:TIGR02169 316 ELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLE 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 627 DKERTIERLKEQRDRDEREKQEeidtykkdlkdlkekvslLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIAL 706
Cdd:TIGR02169 396 KLKREINELKRELDRLQEELQR------------------LSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKL 457
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1958768395 707 EQKKEECLKMESQLKKAhEATLEaraspEMSDRIQQLEREMARYKDESSKAQTEV 761
Cdd:TIGR02169 458 EQLAADLSKYEQELYDL-KEEYD-----RVEKELSKLQRELAEAEAQARASEERV 506
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
567-783 |
1.29e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.07 E-value: 1.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 567 DMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREK 646
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 647 QEEIDTYKK-------DLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLAS--SGLKKD-SRLKTLEIALEQKKEECLKM 716
Cdd:COG4942 100 EAQKEELAEllralyrLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREqaEELRADlAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958768395 717 ESQLKKAHEATLEARAspEMSDRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIA 783
Cdd:COG4942 180 LAELEEERAALEALKA--ERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
535-974 |
3.24e-06 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 51.26 E-value: 3.24e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 535 EEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNT 614
Cdd:pfam05483 229 EEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRS 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 615 DTALTTLEEALADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLASSGLK 694
Cdd:pfam05483 309 MSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQK 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 695 KDSRLKTLEIALEQKKEECLKMESQLKKAHEATLEARASPEMSDRIQQLEREM-----ARYKD----------ESSKAQT 759
Cdd:pfam05483 389 KSSELEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELifllqAREKEihdleiqltaIKTSEEH 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 760 EVDRLLEILKEVENEK-------NDKDKKIAELERQVKDQNKKVANLKHKEQ---VEKKKSAQML---EEARRREDSLSD 826
Cdd:pfam05483 469 YLKEVEDLKTELEKEKlknieltAHCDKLLLENKELTQEASDMTLELKKHQEdiiNCKKQEERMLkqiENLEEKEMNLRD 548
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 827 SSQQLQDSLRKKDD----RIEELEEALRESVQITAEREMVLAQEESARTNAEKQVEELLMAMEKVKQELESMKAKLSSTQ 902
Cdd:pfam05483 549 ELESVREEFIQKGDevkcKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAEN 628
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1958768395 903 QSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKTQEEVAALKREKDRLVQQ 974
Cdd:pfam05483 629 KQLNAYEIKVNKLELELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKRCQH 700
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
515-889 |
3.51e-06 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 51.51 E-value: 3.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 515 AKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKE 594
Cdd:pfam02463 150 MKPERRLEIEEEAAGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYL 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 595 KQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLKEKVSLLqgdLSEK 674
Cdd:pfam02463 230 DYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSEL---LKLE 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 675 EASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEEclkmESQLKKAHEATLEARASPEMSDRIQQLEREMARYKDES 754
Cdd:pfam02463 307 RRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKEL----KELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLE 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 755 SKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKvanlKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQDS 834
Cdd:pfam02463 383 SERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKE----EKKEELEILEEEEESIELKQGKLTEEKEELEKQEL 458
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1958768395 835 LRKKDDRIEELEEALRESVQITAEREMVLAQEESARTNAEKQVEELLMAMEKVKQ 889
Cdd:pfam02463 459 KLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLL 513
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
335-969 |
3.82e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 51.33 E-value: 3.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 335 RLAEAEMHVHHLESLLEQKEKENNMLREEMHRRFE--------NAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQ 406
Cdd:pfam01576 20 RQQKAESELKELEKKHQQLCEEKNALQEQLQAETElcaeaeemRARLAARKQELEEILHELESRLEEEEERSQQLQNEKK 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 407 MLKSNGALSTEEREEEMKQMEVYRSHSKFMKNKVEQLKEELSSKDAQGEELKKRAAGLQSEVFAIGQVKQELSRKDTELL 486
Cdd:pfam01576 100 KMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERKLLEERISEFTSNLAEEEEKAKSLS 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 487 ALQTKLETLTNQFSD-------SKQHIEVLKESLtakEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQA 559
Cdd:pfam01576 180 KLKNKHEAMISDLEErlkkeekGRQELEKAKRKL---EGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEET 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 560 GEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQR 639
Cdd:pfam01576 257 AQKNNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEELEALKTELEDTLDTTAAQQELRSKREQEVTELKKAL 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 640 DRDEREKQEEIdtyKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQ 719
Cdd:pfam01576 337 EEETRSHEAQL---QEMRQKHTQALEELTEQLEQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQ 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 720 LKkaheatlearaspEMSDRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQN------ 793
Cdd:pfam01576 414 LQ-------------ELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQellqee 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 794 --KKVANLKHKEQVEKKKSAQM-----LEEARRR-EDSLSDSSQQLQDSLRKKDDR---IEELEEA-------LRESVQI 855
Cdd:pfam01576 481 trQKLNLSTRLRQLEDERNSLQeqleeEEEAKRNvERQLSTLQAQLSDMKKKLEEDagtLEALEEGkkrlqreLEALTQQ 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 856 TAEREMVLAQEESARTNAEKQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALL 935
Cdd:pfam01576 561 LEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQMLAEEKAISARYAEERDRAEAEAREKETRALS 640
|
650 660 670
....*....|....*....|....*....|....
gi 1958768395 936 AAISEKDANIALLELSSSKKKTQEEVAALKREKD 969
Cdd:pfam01576 641 LARALEEALEAKEELERTNKQLRAEMEDLVSSKD 674
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
732-985 |
4.64e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 50.83 E-value: 4.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 732 ASPEMSDRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDK---KIAELERQVKDQNKKVANLKHKeqveKK 808
Cdd:PRK03918 187 RTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEElkeEIEELEKELESLEGSKRKLEEK----IR 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 809 KSAQMLEEARRREDSLSDSSQQLQdSLRKKDDRIEELEEALRESVQITAEREMVLAQEESARTNAEKQVEELlmamEKVK 888
Cdd:PRK03918 263 ELEERIEELKKEIEELEEKVKELK-ELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKEL----EEKE 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 889 QELESMKAKLSSTQQSLAEKETHLTNLraERRKHLEEVLEmKQEALLAAISEKDANIALLELSSSKKKTQEEVAALKREK 968
Cdd:PRK03918 338 ERLEELKKKLKELEKRLEELEERHELY--EEAKAKKEELE-RLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARI 414
|
250
....*....|....*..
gi 1958768395 969 DRLVQQLKQQTQNRMKL 985
Cdd:PRK03918 415 GELKKEIKELKKAIEEL 431
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
739-899 |
6.03e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 48.77 E-value: 6.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 739 RIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVAnlKHKEQVEKKKSAQMLEEAR 818
Cdd:COG1579 18 ELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIK--KYEEQLGNVRNNKEYEALQ 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 819 RREDSLSDSSQQLQDSLRKKDDRIEELEEALREsvqITAEREMVLAQEESARTNAEKQVEELLMAMEKVKQELESMKAKL 898
Cdd:COG1579 96 KEIESLKRRISDLEDEILELMERIEELEEELAE---LEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAAKI 172
|
.
gi 1958768395 899 S 899
Cdd:COG1579 173 P 173
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
468-608 |
6.91e-06 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 49.58 E-value: 6.91e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 468 VFAIGQ--VKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKT 545
Cdd:PRK09039 36 VFVVAQffLSREISGKDSALDRLNSQIAELADLLSLERQGNQDLQDSVANLRASLSAAEAERSRLQALLAELAGAGAAAE 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 546 KQIQDMAEEKGTQAGEIHDlkdmldvKERKVNVLQKKIENLQEQL------------RDKEKQM----------SSLKER 603
Cdd:PRK09039 116 GRAGELAQELDSEKQVSAR-------ALAQVELLNQQIAALRRQLaaleaaldasekRDRESQAkiadlgrrlnVALAQR 188
|
....*
gi 1958768395 604 VKSLQ 608
Cdd:PRK09039 189 VQELN 193
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
477-648 |
7.14e-06 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 49.83 E-value: 7.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 477 ELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKT----KQIQDMA 552
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERReelgERARALY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 553 EEKGT--------QAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEA 624
Cdd:COG3883 97 RSGGSvsyldvllGSESFSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQ 176
|
170 180
....*....|....*....|....
gi 1958768395 625 LADKERTIERLKEQRDRDEREKQE 648
Cdd:COG3883 177 QAEQEALLAQLSAEEAAAEAQLAE 200
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
721-906 |
7.15e-06 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 50.16 E-value: 7.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 721 KKAHEATLEARaspemsDRIQQLEREMARYKDEsskAQTEV-DRLLEILKEVENEKNDKDKKIAELERQVKDqnkKVANL 799
Cdd:PRK12704 31 AKIKEAEEEAK------RILEEAKKEAEAIKKE---ALLEAkEEIHKLRNEFEKELRERRNELQKLEKRLLQ---KEENL 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 800 KHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQDSLRKKDDRIEELEEAlresVQITAE--REMVLAQ-EESARTNAEKQ 876
Cdd:PRK12704 99 DRKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERI----SGLTAEeaKEILLEKvEEEARHEAAVL 174
|
170 180 190
....*....|....*....|....*....|..
gi 1958768395 877 VEEllmAMEKVKQELEsMKAK--LSSTQQSLA 906
Cdd:PRK12704 175 IKE---IEEEAKEEAD-KKAKeiLAQAIQRCA 202
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
782-982 |
8.83e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 49.94 E-value: 8.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 782 IAELERQVKdqnkkvanlKHKEQVEKKKSAQML-EEARRREDSLSdssqqlqdsLRKKDDRIEELEEALRESVQITAERE 860
Cdd:COG1196 195 LGELERQLE---------PLERQAEKAERYRELkEELKELEAELL---------LLKLRELEAELEELEAELEELEAELE 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 861 mvlaQEESARTNAEKQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISE 940
Cdd:COG1196 257 ----ELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEEL 332
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1958768395 941 KDANIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNR 982
Cdd:COG1196 333 EELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAEL 374
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
477-651 |
1.12e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 48.00 E-value: 1.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 477 ELSRKDTELLALQTKLETLtnqfsdsKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLnkktKQIQDMAEEKG 556
Cdd:COG1579 11 DLQELDSELDRLEHRLKEL-------PAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEI----EEVEARIKKYE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 557 TQAGEIHDLKDMldvkerkvNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLK 636
Cdd:COG1579 80 EQLGNVRNNKEY--------EALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEEL 151
|
170
....*....|....*
gi 1958768395 637 EQRDRDEREKQEEID 651
Cdd:COG1579 152 AELEAELEELEAERE 166
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
520-763 |
1.71e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.61 E-value: 1.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 520 AAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSS 599
Cdd:COG4942 8 ALLLALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 600 LKERVKSLQAdttntdtALTTLEEALADKERTIERLKEQ-------RDRDEREKQEEIDTYKKDLKDLKEKVSLLQGDLS 672
Cdd:COG4942 88 LEKEIAELRA-------ELEAQKEELAELLRALYRLGRQpplalllSPEDFLDAVRRLQYLKYLAPARREQAEELRADLA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 673 EKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEATLE-ARASPEMSDRIQQLEREMARYK 751
Cdd:COG4942 161 ELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAElQQEAEELEALIARLEAEAAAAA 240
|
250
....*....|..
gi 1958768395 752 DESSKAQTEVDR 763
Cdd:COG4942 241 ERTPAAGFAALK 252
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
414-948 |
2.00e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 48.95 E-value: 2.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 414 LSTEEREEEMKQMEVYRSHSKfmkNKVEQLKEELSSKDAQGEELKKRAAGLQSEvfaIGQVKQELSRKDTELLALQTKLE 493
Cdd:pfam05483 247 IQITEKENKMKDLTFLLEESR---DKANQLEEKTKLQDENLKELIEKKDHLTKE---LEDIKMSLQRSMSTQKALEEDLQ 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 494 TLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEK------------------ETMLNKKTKQIQDMAEEK 555
Cdd:pfam05483 321 IATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELlrteqqrleknedqlkiiTMELQKKSSELEEMTKFK 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 556 GTQAGEIHDLKDMLDVKERKVNVlQKKIENLQEQLRDKEKQMSSLkervksLQADTTNTDTALTTLEEALADKERTIERL 635
Cdd:pfam05483 401 NNKEVELEELKKILAEDEKLLDE-KKQFEKIAEELKGKEQELIFL------LQAREKEIHDLEIQLTAIKTSEEHYLKEV 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 636 KEQRDRDEREKQEEIDTYKKDLKDLKEKVSLLQgdlsEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKkeecLK 715
Cdd:pfam05483 474 EDLKTELEKEKLKNIELTAHCDKLLLENKELTQ----EASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKE----MN 545
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 716 MESQLKKAHEATLEARasPEMSDRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKK 795
Cdd:pfam05483 546 LRDELESVREEFIQKG--DEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKK 623
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 796 VANLKHKEQVEKKKSAQM---LEEARRREDSLSDSSQ-QLQDSLRKKDDRIEELEEAlresvQITAEREMVLAQEESARt 871
Cdd:pfam05483 624 GSAENKQLNAYEIKVNKLeleLASAKQKFEEIIDNYQkEIEDKKISEEKLLEEVEKA-----KAIADEAVKLQKEIDKR- 697
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 872 nAEKQVEELLMAMEKVKQ-----------ELESMKAKLSSTQQSLAEKETHLTNLRAERRKhLEEVLEMKQEALLAAISE 940
Cdd:pfam05483 698 -CQHKIAEMVALMEKHKHqydkiieerdsELGLYKNKEQEQSSAKAALEIELSNIKAELLS-LKKQLEIEKEEKEKLKME 775
|
....*...
gi 1958768395 941 KDANIALL 948
Cdd:pfam05483 776 AKENTAIL 783
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
564-976 |
2.31e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 48.52 E-value: 2.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 564 DLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDE 643
Cdd:PRK03918 169 EVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELE 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 644 REKQEeidtykkdlkdlkekVSLLQGDLSEKEASLLDLKEHASSLAssglKKDSRLKTleiaLEQKKEECLKMESQLKka 723
Cdd:PRK03918 249 SLEGS---------------KRKLEEKIRELEERIEELKKEIEELE----EKVKELKE----LKEKAEEYIKLSEFYE-- 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 724 heatlearaspEMSDRIQQLEREMARYKDESSKAQTEVDRLLEI---LKEVENEKNDKDKKIAELERQVKDQNKKVANLK 800
Cdd:PRK03918 304 -----------EYLDELREIEKRLSRLEEEINGIEERIKELEEKeerLEELKKKLKELEKRLEELEERHELYEEAKAKKE 372
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 801 HKEQVEKKKSAQMLEEARRREDSLSDSSQQLQDSLRKKDDRIEELEealresvQITAEREMVLAQEESART-----NAEK 875
Cdd:PRK03918 373 ELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELK-------KEIKELKKAIEELKKAKGkcpvcGREL 445
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 876 QVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKK 955
Cdd:PRK03918 446 TEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAE 525
|
410 420
....*....|....*....|....
gi 1958768395 956 ---KTQEEVAALKREKDRLVQQLK 976
Cdd:PRK03918 526 eyeKLKEKLIKLKGEIKSLKKELE 549
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
596-834 |
2.52e-05 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 48.47 E-value: 2.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 596 QMSSL-KERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLKEKVSLLQGDLSEK 674
Cdd:PHA02562 167 EMDKLnKDKIRELNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEELTDELLNL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 675 EASLLDLKEHASSLASSGLKKDSRLKTL--EIALEQKKEECL-----------KMESQLKKAHEATLEARaspEMSDRIQ 741
Cdd:PHA02562 247 VMDIEDPSAALNKLNTAAAKIKSKIEQFqkVIKMYEKGGVCPtctqqisegpdRITKIKDKLKELQHSLE---KLDTAID 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 742 QLEREMARYKDESSKA---QTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEar 818
Cdd:PHA02562 324 ELEEIMDEFNEQSKKLlelKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSELVKE-- 401
|
250
....*....|....*.
gi 1958768395 819 rrEDSLSDSSQQLQDS 834
Cdd:PHA02562 402 --KYHRGIVTDLLKDS 415
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
580-893 |
2.66e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 48.20 E-value: 2.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 580 QKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLK-EQRDRD-EREKQEEIdtykKDL 657
Cdd:pfam17380 298 QERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAMERERELERIRqEERKRElERIRQEEI----AME 373
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 658 KDLKEKVSLLQGDLSEKEASLLDLKEHAsslassglkkdSRLKTLEIALEQKKEECLKMESQLKKAHEatlEARASpEMS 737
Cdd:pfam17380 374 ISRMRELERLQMERQQKNERVRQELEAA-----------RKVKILEEERQRKIQQQKVEMEQIRAEQE---EARQR-EVR 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 738 DRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKiAELERQVKDQNKKVAnlkhkEQVEKKKSAQMLEEA 817
Cdd:pfam17380 439 RLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKE-KRDRKRAEEQRRKIL-----EKELEERKQAMIEEE 512
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 818 RRREdSLSDSSQQLQDSLRKKDDRiEELEEALRESVQITAER----EMVLAQEESARTNAEKQVEELLMAM---EKVKQE 890
Cdd:pfam17380 513 RKRK-LLEKEMEERQKAIYEEERR-REAEEERRKQQEMEERRriqeQMRKATEERSRLEAMEREREMMRQIvesEKARAE 590
|
...
gi 1958768395 891 LES 893
Cdd:pfam17380 591 YEA 593
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
719-931 |
2.74e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 48.37 E-value: 2.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 719 QLKKAHEATLEARAS-------PEMSDRIQQLEREMARYKDESSK-----AQTEVDRLLEILKEVENEKNDKDKKIAELE 786
Cdd:COG4913 236 DLERAHEALEDAREQiellepiRELAERYAAARERLAELEYLRAAlrlwfAQRRLELLEAELEELRAELARLEAELERLE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 787 RQVKDQNKKVANLKhkeqvekkksAQMLEEARRREDSLSDSSQQLQDSLRKKDDRIEELEEALResvqitaeremvlAQE 866
Cdd:COG4913 316 ARLDALREELDELE----------AQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLA-------------ALG 372
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958768395 867 ESARTNAEkqveELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQ 931
Cdd:COG4913 373 LPLPASAE----EFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLER 433
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
389-605 |
2.74e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.84 E-value: 2.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 389 SKISSMERGLRDLEEEIQMLKSNGALSTEEREEEMKQMEVYRSHSKFMKNKVEQLKEELSSKDAQGEELKKRAAGLQSEv 468
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE- 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 469 faIGQVKQELSR--KDTELLALQTKLETLTNQ--FSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKK 544
Cdd:COG4942 99 --LEAQKEELAEllRALYRLGRQPPLALLLSPedFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAEL 176
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958768395 545 TKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVK 605
Cdd:COG4942 177 EALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
264-593 |
3.03e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 48.30 E-value: 3.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 264 EENFQRLHAEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSkgLSAKATEEdheRTRRLAEAEMHV 343
Cdd:pfam12128 610 EEALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQS--EKDKKNKA---LAERKDSANERL 684
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 344 HHLESLLEQKEKENNMLREEMHRRFENApDSAKTKALQTVIEMKDSKISSmerglrdLEEEIQMLKSNGALSTEEREEEM 423
Cdd:pfam12128 685 NSLEAQLKQLDKKHQAWLEEQKEQKREA-RTEKQAYWQVVEGALDAQLAL-------LKAAIAARRSGAKAELKALETWY 756
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 424 KQMEVYRSHSKFMKNKVEQLKEELSSKDAQGEelKKRAAGLQSEVFAIGQVKQELSRKDTELLALQTKLE----TLTNQF 499
Cdd:pfam12128 757 KRDLASLGVDPDVIAKLKREIRTLERKIERIA--VRRQEVLRYFDWYQETWLQRRPRLATQLSNIERAISelqqQLARLI 834
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 500 SDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMlnkktKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVL 579
Cdd:pfam12128 835 ADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKLATL-----KEDANSEQAQGSIGERLAQLEDLKLKRDYLSESV 909
|
330
....*....|....
gi 1958768395 580 QKKIENLQEQLRDK 593
Cdd:pfam12128 910 KKYVEHFKNVIADH 923
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
476-938 |
3.31e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.84 E-value: 3.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 476 QELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKEtmLNKKTKQIQDMAEEK 555
Cdd:COG4717 74 KELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEA--LEAELAELPERLEEL 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 556 GTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLR-DKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIER 634
Cdd:COG4717 152 EERLEELRELEEELEELEAELAELQEELEELLEQLSlATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQ 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 635 LKEQRDRDEREKQeeidtykkdlkdlkekvsllqgdLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECL 714
Cdd:COG4717 232 LENELEAAALEER-----------------------LKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLAL 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 715 KMESQLKKAHEATLEARASPEMSDRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQnk 794
Cdd:COG4717 289 LFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLE-- 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 795 kvANLKHKEQVEKKKSAQMLEEARRRedslsdssQQLQDSLRKKDDRIEELEEALREsvqitAEREMVLAQEESARTNAE 874
Cdd:COG4717 367 --ELEQEIAALLAEAGVEDEEELRAA--------LEQAEEYQELKEELEELEEQLEE-----LLGELEELLEALDEEELE 431
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1958768395 875 KQVEELLMAMEKVKQELESMKAKLSSTQQSL--AEKETHLTNLRAERRKHLEEVLEMKQEALLAAI 938
Cdd:COG4717 432 EELEELEEELEELEEELEELREELAELEAELeqLEEDGELAELLQELEELKAELRELAEEWAALKL 497
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
288-895 |
3.48e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 47.97 E-value: 3.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 288 LEEMELRIETQKQTLNARDESIKKLLEMLQSKGL---SAKATEEDHERTRRLAEAEmhVHHLESLLEQKEKENNMLREEM 364
Cdd:PRK01156 164 LERNYDKLKDVIDMLRAEISNIDYLEEKLKSSNLeleNIKKQIADDEKSHSITLKE--IERLSIEYNNAMDDYNNLKSAL 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 365 HRrfenapdsakTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSngalsTEEREEEMKQMEVYRSHSKF-----MKNK 439
Cdd:PRK01156 242 NE----------LSSLEDMKNRYESEIKTAESDLSMELEKNNYYKE-----LEERHMKIINDPVYKNRNYIndyfkYKND 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 440 VEQLKEELSSKDAQ---GEELKKRAAGLQSEVfaiGQVKQELSRKDtELLALQTKLETLTNQFSDSKQHIEVLKESLTAK 516
Cdd:PRK01156 307 IENKKQILSNIDAEinkYHAIIKKLSVLQKDY---NDYIKKKSRYD-DLNNQILELEGYEMDYNSYLKSIESLKKKIEEY 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 517 EQRAAILQTEVDALRLRLEEKETMLNKKTKQIqdmaeekgtqageihdlKDMLDVKERKVNVLQKKIENLQEQLRDKEKQ 596
Cdd:PRK01156 383 SKNIERMSAFISEILKIQEIDPDAIKKELNEI-----------------NVKLQDISSKVSSLNQRIRALRENLDELSRN 445
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 597 MSSLKERVK-----------SLQADTTNTDTALTTLEEALADKERTI----ERLKEQRDRDEREKQEEIDTYKKDLKDlk 661
Cdd:PRK01156 446 MEMLNGQSVcpvcgttlgeeKSNHIINHYNEKKSRLEEKIREIEIEVkdidEKIVDLKKRKEYLESEEINKSINEYNK-- 523
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 662 ekvsllqgdLSEKEASLLDLKEHASSLASSGLKK---DSRLKTLEIA-LEQKKEECLKMESQLKKAHEATLEARaSPEMS 737
Cdd:PRK01156 524 ---------IESARADLEDIKIKINELKDKHDKYeeiKNRYKSLKLEdLDSKRTSWLNALAVISLIDIETNRSR-SNEIK 593
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 738 DRIQQLEremarykdesskaqtevDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVanlkhKEQVEKKKSAQMLEEA 817
Cdd:PRK01156 594 KQLNDLE-----------------SRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKY-----NEIQENKILIEKLRGK 651
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958768395 818 RRREDSLSDSSQQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAQEESARTNAEKQVEELLMAMEKVKQELESMK 895
Cdd:PRK01156 652 IDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDINETLESMK 729
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
344-905 |
3.76e-05 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 48.12 E-value: 3.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 344 HHLESLLEQKEKENNMLREEMHR--RFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGAlstEEREE 421
Cdd:TIGR01612 1129 HHIKALEEIKKKSENYIDEIKAQinDLEDVADKAISNDDPEEIEKKIENIVTKIDKKKNIYDEIKKLLNEIA---EIEKD 1205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 422 EMKQMEVYRSHSKFMKNKVEQLKEELSSKDAQGEELKKRAAGLQSEVFAIGQVKQELSRKDTELLALQTKLETLTNQFSD 501
Cdd:TIGR01612 1206 KTSLEEVKGINLSYGKNLGKLFLEKIDEEKKKSEHMIKAMEAYIEDLDEIKEKSPEIENEMGIEMDIKAEMETFNISHDD 1285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 502 SKQHievlkeSLTAKEQRAAILQTEVDALRLRLE-EKETMLNKKTKQIQDMAEEKGTQAGEIH----------------D 564
Cdd:TIGR01612 1286 DKDH------HIISKKHDENISDIREKSLKIIEDfSEESDINDIKKELQKNLLDAQKHNSDINlylneianiynilklnK 1359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 565 LKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKslqadttnTDTALTTLEEALADKE--RTIERLKEQRDRD 642
Cdd:TIGR01612 1360 IKKIIDEVKEYTKEIEENNKNIKDELDKSEKLIKKIKDDIN--------LEECKSKIESTLDDKDidECIKKIKELKNHI 1431
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 643 EREkQEEIDTYKKDLKDLKEKVSLLQGDL-------------------SEKEASLLDLKEHASSLASSGLKKDSRLKTLE 703
Cdd:TIGR01612 1432 LSE-ESNIDTYFKNADENNENVLLLFKNIemadnksqhilkikkdnatNDHDFNINELKEHIDKSKGCKDEADKNAKAIE 1510
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 704 ---IALEQKKEECLKMES-----------------------QLKKAH-EATLEARASPEmsdRIQQLEREMARYKDESSK 756
Cdd:TIGR01612 1511 knkELFEQYKKDVTELLNkysalaiknkfaktkkdseiiikEIKDAHkKFILEAEKSEQ---KIKEIKKEKFRIEDDAAK 1587
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 757 AQTEVDRLLEILKEVENEKNdKDKKIAELERQVKDqnkkvaNLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQDSLR 836
Cdd:TIGR01612 1588 NDKSNKAAIDIQLSLENFEN-KFLKISDIKKKIND------CLKETESIEKKISSFSIDSQDTELKENGDNLNSLQEFLE 1660
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 837 KKDDRIEELEEALRESVQITAEREMVLAQEESARTNAEKQVEELLMAMEKV-KQELESMKAKLSSTQQSL 905
Cdd:TIGR01612 1661 SLKDQKKNIEDKKKELDELDSEIEKIEIDVDQHKKNYEIGIIEKIKEIAIAnKEEIESIKELIEPTIENL 1730
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
716-949 |
4.77e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 47.70 E-value: 4.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 716 MESQLKKAHEATLEARAS-----PEMSDRIQQLEREMARYKDE------SSKAQTEVDRLLEI---LKEVENEKNDKDKK 781
Cdd:COG3206 162 LEQNLELRREEARKALEFleeqlPELRKELEEAEAALEEFRQKnglvdlSEEAKLLLQQLSELesqLAEARAELAEAEAR 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 782 IAELERQVKDQNKKVANLKHKEQVEKKKSAqmLEEARRREDSLSDSSQQLQDSLRKKDDRIEELEEalresvQITAEREM 861
Cdd:COG3206 242 LAALRAQLGSGPDALPELLQSPVIQQLRAQ--LAELEAELAELSARYTPNHPDVIALRAQIAALRA------QLQQEAQR 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 862 VLAQEESARTNAEKQVEELlmamekvKQELESMKAKLsstqQSLAEKETHLTNLRAER---RKHLEEVLEMKQEALLAAi 938
Cdd:COG3206 314 ILASLEAELEALQAREASL-------QAQLAQLEARL----AELPELEAELRRLEREVevaRELYESLLQRLEEARLAE- 381
|
250
....*....|.
gi 1958768395 939 SEKDANIALLE 949
Cdd:COG3206 382 ALTVGNVRVID 392
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
445-984 |
4.94e-05 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 47.48 E-value: 4.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 445 EELSSKDAQGEELKKRAAGLQSEVFAIGQVKQELSRkdtELLALQTKLETLTNQFSDS----------KQHIEVLKESLT 514
Cdd:pfam01576 5 EEMQAKEEELQKVKERQQKAESELKELEKKHQQLCE---EKNALQEQLQAETELCAEAeemrarlaarKQELEEILHELE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 515 AK----EQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQL 590
Cdd:pfam01576 82 SRleeeEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERKLLEERI 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 591 RDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERT---IERLKEQRDRDEREKQEEIdtykkdlKDLKEKVSLL 667
Cdd:pfam01576 162 SEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGrqeLEKAKRKLEGESTDLQEQI-------AELQAQIAEL 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 668 QGDLSEKEASLLDLKehaSSLASSGLKKDSRLKTLeialeqkkEECLKMESQLKKAHEATLEARASPEMSDRIQQLEREM 747
Cdd:pfam01576 235 RAQLAKKEEELQAAL---ARLEEETAQKNNALKKI--------RELEAQISELQEDLESERAARNKAEKQRRDLGEELEA 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 748 ARYKDESSKAQTEVDRLLEILKEVENEKNDKdkkiaELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDS 827
Cdd:pfam01576 304 LKTELEDTLDTTAAQQELRSKREQEVTELKK-----ALEEETRSHEAQLQEMRQKHTQALEELTEQLEQAKRNKANLEKA 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 828 SQQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAQEESARTNAEKQVEELLMAMEKVKQELESMKAKLSSTQQslae 907
Cdd:pfam01576 379 KQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEG---- 454
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958768395 908 KETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMK 984
Cdd:pfam01576 455 KNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKK 531
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
738-1009 |
6.33e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 47.04 E-value: 6.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 738 DRIQQLE--REMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLE 815
Cdd:pfam17380 351 ERIRQEErkRELERIRQEEIAMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQE 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 816 EARRREdslsdsSQQLQDSLRKKDDRIEELEEALRESVQITAEREmvlAQEESARTNAEKQVEELLMAMEKVKQELESmk 895
Cdd:pfam17380 431 EARQRE------VRRLEEERAREMERVRLEEQERQQQVERLRQQE---EERKRKKLELEKEKRDRKRAEEQRRKILEK-- 499
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 896 aKLSSTQQSLAEKEthltnlraERRKHLEEVLEMKQEALLAAISEKDAniallelsSSKKKTQEEVaalkREKDRLVQQL 975
Cdd:pfam17380 500 -ELEERKQAMIEEE--------RKRKLLEKEMEERQKAIYEEERRREA--------EEERRKQQEM----EERRRIQEQM 558
|
250 260 270
....*....|....*....|....*....|....
gi 1958768395 976 KQQTQNRMKLMADNYEDDHFRSSRSNQTNHKPSP 1009
Cdd:pfam17380 559 RKATEERSRLEAMEREREMMRQIVESEKARAEYE 592
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
476-688 |
8.53e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.83 E-value: 8.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 476 QELSRKDTELLALQTKLETLtnqfsdskQHIEVLKESLTAKEQRAAILQTEVDALRLrlEEKETMLNKKTKQIQDMAEEK 555
Cdd:COG4913 235 DDLERAHEALEDAREQIELL--------EPIRELAERYAAARERLAELEYLRAALRL--WFAQRRLELLEAELEELRAEL 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 556 GTQAGEIHDLKDMLDVKERKVNVLQ--------KKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALAD 627
Cdd:COG4913 305 ARLEAELERLEARLDALREELDELEaqirgnggDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAA 384
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958768395 628 KERTIERLKEQRDRDEREKQEEIDtykkdlkDLKEKVSLLQGDLSEKEASLLDLKEHASSL 688
Cdd:COG4913 385 LRAEAAALLEALEEELEALEEALA-------EAEAALRDLRRELRELEAEIASLERRKSNI 438
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
629-859 |
1.21e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.45 E-value: 1.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 629 ERTIERLKEQRD--RDEREKQEEIDTYKKDLKDLKEKVSLLQGDLSEKEASLLDlkehasslassglkkdSRLKTLEIAL 706
Cdd:COG4913 241 HEALEDAREQIEllEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLE----------------AELEELRAEL 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 707 EQKKEECLKMESQLKKAHEATLEARASPEMS--DRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAE 784
Cdd:COG4913 305 ARLEAELERLEARLDALREELDELEAQIRGNggDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAA 384
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958768395 785 LERQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQDSLRKKDDRIEELEEALRESVQITAER 859
Cdd:COG4913 385 LRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALRDALAEALGLDEAE 459
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
794-967 |
1.37e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 45.92 E-value: 1.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 794 KKVANLKHKEqvEKKKSAQMLEEARRREDSLSDssQQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAQEESartNA 873
Cdd:PRK12704 26 KKIAEAKIKE--AEEEAKRILEEAKKEAEAIKK--EALLEAKEEIHKLRNEFEKELRERRNELQKLEKRLLQKEE---NL 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 874 EKQVEELlmamEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEallaaisekDANIALLElsSS 953
Cdd:PRK12704 99 DRKLELL----EKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERISGLTAE---------EAKEILLE--KV 163
|
170
....*....|....
gi 1958768395 954 KKKTQEEVAALKRE 967
Cdd:PRK12704 164 EEEARHEAAVLIKE 177
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
573-851 |
1.96e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.68 E-value: 1.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 573 ERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEAL--ADKERTIERLKEQRDRDEREKQEei 650
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIdvASAEREIAELEAELERLDASSDD-- 686
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 651 dtykkdlkdlkekVSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEATLEA 730
Cdd:COG4913 687 -------------LAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEE 753
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 731 RASPEMSDRI-----QQLEREMARYKDESSKAQTEVDRLL-EILKEVENEKNDKDKKIAELE--RQVKDQNKKVANLKHK 802
Cdd:COG4913 754 RFAAALGDAVerelrENLEERIDALRARLNRAEEELERAMrAFNREWPAETADLDADLESLPeyLALLDRLEEDGLPEYE 833
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1958768395 803 EQVEKKKSAQMleearrrEDSLSDSSQQLQDSLRKKDDRIEELEEALRE 851
Cdd:COG4913 834 ERFKELLNENS-------IEFVADLLSKLRRAIREIKERIDPLNDSLKR 875
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
779-940 |
2.30e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 44.15 E-value: 2.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 779 DKKIAELERQVKDQNKKVANLKHkeqvEKKKSAQMLEEARRREDSLSDSSQQLQDSLRKKDDRIEELEEAL------RES 852
Cdd:COG1579 16 DSELDRLEHRLKELPAELAELED----ELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLgnvrnnKEY 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 853 VQITAEremvLAQEESARTNAEKQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEmKQE 932
Cdd:COG1579 92 EALQKE----IESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEA-ERE 166
|
....*...
gi 1958768395 933 ALLAAISE 940
Cdd:COG1579 167 ELAAKIPP 174
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
473-651 |
2.36e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.29 E-value: 2.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 473 QVKQELSRKDTELLAL-----QTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLeeketmLNKKTKQ 547
Cdd:COG4913 266 AARERLAELEYLRAALrlwfaQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQI------RGNGGDR 339
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 548 IQDMAEekgtqagEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQAdttntdtALTTLEEALAD 627
Cdd:COG4913 340 LEQLER-------EIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLE-------ALEEELEALEE 405
|
170 180
....*....|....*....|....
gi 1958768395 628 KERTIERLKEQRDRDEREKQEEID 651
Cdd:COG4913 406 ALAEAEAALRDLRRELRELEAEIA 429
|
|
| RecN |
COG0497 |
DNA repair ATPase RecN [Replication, recombination and repair]; |
738-984 |
2.41e-04 |
|
DNA repair ATPase RecN [Replication, recombination and repair];
Pssm-ID: 440263 [Multi-domain] Cd Length: 555 Bit Score: 45.07 E-value: 2.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 738 DRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENekndkdkkiaelerqvkdqnkkvANLKHKEQVEkkksaqmLEEA 817
Cdd:COG0497 165 RAWRALKKELEELRADEAERARELDLLRFQLEELEA-----------------------AALQPGEEEE-------LEEE 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 818 RRRedsLSdSSQQLQDSLRKKDDRIEELEEALRESVQiTAEREMV-LAQEESARTNAEKQVEELLMAMEKVKQELESMKA 896
Cdd:COG0497 215 RRR---LS-NAEKLREALQEALEALSGGEGGALDLLG-QALRALErLAEYDPSLAELAERLESALIELEEAASELRRYLD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 897 KLSSTQQSLAEKETHLTNLRAERRKH---LEEVLEMKQEAL--LAAISEKDANIALLElssskkktqEEVAALKREKDRL 971
Cdd:COG0497 290 SLEFDPERLEEVEERLALLRRLARKYgvtVEELLAYAEELRaeLAELENSDERLEELE---------AELAEAEAELLEA 360
|
250
....*....|...
gi 1958768395 972 VQQLkqqTQNRMK 984
Cdd:COG0497 361 AEKL---SAARKK 370
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
685-899 |
2.63e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.75 E-value: 2.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 685 ASSLASSGLKKDSRLKTLEiALEQKKEECLKMESQLKKAHEATLEARAspEMSDRIQQLEREMARYKDESSKAQTEVDRL 764
Cdd:COG4942 12 ALAAAAQADAAAEAEAELE-QLQQEIAELEKELAALKKEEKALLKQLA--ALERRIAALARRIRALEQELAALEAELAEL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 765 LEILKEVENEKNDKDKKIAELER--QVKDQNKKVANLKHKEQVEK------------KKSAQMLEEARRREDSLSDSSQQ 830
Cdd:COG4942 89 EKEIAELRAELEAQKEELAELLRalYRLGRQPPLALLLSPEDFLDavrrlqylkylaPARREQAEELRADLAELAALRAE 168
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958768395 831 LQDSLRKKDDRIEELEEALRESVQITAEREMVLAQEESARTNAEKQVEELLMAMEKVKQELESMKAKLS 899
Cdd:COG4942 169 LEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
471-794 |
2.66e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 44.51 E-value: 2.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 471 IGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQD 550
Cdd:COG4372 47 LEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQD 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 551 MAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERvkSLQADTTNTDTALTTLEEALADKER 630
Cdd:COG4372 127 LEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEA--EAEQALDELLKEANRNAEKEEELAE 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 631 TIERLKEQRDRDEREKQEEIDTYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKK 710
Cdd:COG4372 205 AEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALE 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 711 EECLKMESQLKKAHEATLEARASPEMSDRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVK 790
Cdd:COG4372 285 LEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLLVGLLDNDVLELLSKGAE 364
|
....
gi 1958768395 791 DQNK 794
Cdd:COG4372 365 AGVA 368
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
532-971 |
2.71e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 45.28 E-value: 2.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 532 LRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADT 611
Cdd:PRK01156 169 DKLKDVIDMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLE 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 612 TNTDTALTTLEEALADKERTIERLKEQRDRDER----------EKQEEIDTYKKdlkdlkekvslLQGDlsekeasLLDL 681
Cdd:PRK01156 249 DMKNRYESEIKTAESDLSMELEKNNYYKELEERhmkiindpvyKNRNYINDYFK-----------YKND-------IENK 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 682 KEHASSLASSGLKKDSRLKTLEIaLEQKKEECLKMESQLKKAHEATLEARA-SPEMSDRIQQLEREMARYKDESSKAQTE 760
Cdd:PRK01156 311 KQILSNIDAEINKYHAIIKKLSV-LQKDYNDYIKKKSRYDDLNNQILELEGyEMDYNSYLKSIESLKKKIEEYSKNIERM 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 761 VDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANLkhkeQVEKKKSAQMLEEARRREDSLS--------------D 826
Cdd:PRK01156 390 SAFISEILKIQEIDPDAIKKELNEINVKLQDISSKVSSL----NQRIRALRENLDELSRNMEMLNgqsvcpvcgttlgeE 465
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 827 SSQQLQDSLRKKDDRIEE-LEEALRESVQITAEREMVLAQEESARTNAEKQVEELLMAMEKVKQELESMKAKLSstqqSL 905
Cdd:PRK01156 466 KSNHIINHYNEKKSRLEEkIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKIESARADLEDIKIKIN----EL 541
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1958768395 906 AEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEkdanIALLELSSSKKKTQEEVAALKREKDRL 971
Cdd:PRK01156 542 KDKHDKYEEIKNRYKSLKLEDLDSKRTSWLNALAV----ISLIDIETNRSRSNEIKKQLNDLESRL 603
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
757-971 |
3.12e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.91 E-value: 3.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 757 AQTEVDRLLEILKEVENEKndkdKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQLQDSLR 836
Cdd:COG4913 230 LVEHFDDLERAHEALEDAR----EQIELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEELRAELA 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 837 KKDDRIEELEEalresvQITAEREMVLAQEESARTNAEKQVEELlmamekvKQELESMKAKLSSTQQSLAEKETHLTNLR 916
Cdd:COG4913 306 RLEAELERLEA------RLDALREELDELEAQIRGNGGDRLEQL-------EREIERLERELEERERRRARLEALLAALG 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1958768395 917 AERRKHLEEVLEMKQEA--LLAAISEKDANI--ALLELSSSKKKTQEEVAALKREKDRL 971
Cdd:COG4913 373 LPLPASAEEFAALRAEAaaLLEALEEELEALeeALAEAEAALRDLRRELRELEAEIASL 431
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
260-895 |
4.20e-04 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 44.36 E-value: 4.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 260 AELTEENFQRLhaehERQAKELFLLRKTLEEMELRIETQKQTLNARdesikkllemlqskGLSAKATEEDHERTRR-LAE 338
Cdd:pfam07111 65 AELISRQLQEL----RRLEEEVRLLRETSLQQKMRLEAQAMELDAL--------------AVAEKAGQAEAEGLRAaLAG 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 339 AEMHVHHLESLLEQKEKENNMLREEMHrrfenapdSAKTKALQTVIEMKDSKISSMERGLRDLEEEiqmlksngalstee 418
Cdd:pfam07111 127 AEMVRKNLEEGSQRELEEIQRLHQEQL--------SSLTQAHEEALSSLTSKAEGLEKSLNSLETK-------------- 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 419 REEEMKQMEVYRSHSKFMKNKVEQLKEELSSKDAQGEELKKraaglqsevFAIGQVKQELSRKDTELlALQTKLETLtnq 498
Cdd:pfam07111 185 RAGEAKQLAEAQKEAELLRKQLSKTQEELEAQVTLVESLRK---------YVGEQVPPEVHSQTWEL-ERQELLDTM--- 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 499 fsdskQHIEVLKESLTAKEQraaILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAgeihdlKDMLDVKERKVNV 578
Cdd:pfam07111 252 -----QHLQEDRADLQATVE---LLQVRVQSLTHMLALQEEELTRKIQPSDSLEPEFPKKC------RSLLNRWREKVFA 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 579 LQKKIENLQEQLRDKEKQmssLKERVKSLQADTTNTDTALTTLEEALADK--ERTIERLK--------EQRDRDEREKQE 648
Cdd:pfam07111 318 LMVQLKAQDLEHRDSVKQ---LRGQVAELQEQVTSQSQEQAILQRALQDKaaEVEVERMSakglqmelSRAQEARRRQQQ 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 649 EIDTYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLA---SSGLKKDSRLKTL---EIALEQkkeecLKMESQLKK 722
Cdd:pfam07111 395 QTASAEEQLKFVVNAMSSTQIWLETTMTRVEQAVARIPSLSnrlSYAVRKVHTIKGLmarKVALAQ-----LRQESCPPP 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 723 AHEATLEARASPEMSDRIQQLEREMARYKDESSKAQTEVDRLLEilkEVENEKNDKDKKIAELERQVKDQNKKVANLKHK 802
Cdd:pfam07111 470 PPAPPVDADLSLELEQLREERNRLDAELQLSAHLIQQEVGRARE---QGEAERQQLSEVAQQLEQELQRAQESLASVGQQ 546
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 803 EQVEKKKSAQMLEEARRREDSLSDSSQQLQDSLRKKddrIEELEEALRESVQITAEREMVLAQEESARTNAEKQVEELLM 882
Cdd:pfam07111 547 LEVARQGQQESTEEAASLRQELTQQQEIYGQALQEK---VAEVETRLREQLSDTKRRLNEARREQAKAVVSLRQIQHRAT 623
|
650
....*....|...
gi 1958768395 883 AMEKVKQELESMK 895
Cdd:pfam07111 624 QEKERNQELRRLQ 636
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
700-851 |
4.21e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 44.46 E-value: 4.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 700 KTLEIALEQKKEECLKMESQlKKAHEATLEARASPEMSDRIQQLEREmarykdesskaqteVDRLLEILKEVENEKNDKD 779
Cdd:COG2433 376 LSIEEALEELIEKELPEEEP-EAEREKEHEERELTEEEEEIRRLEEQ--------------VERLEAEVEELEAELEEKD 440
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1958768395 780 KKIAELERQVKDqnkkvanLKHKEQVEKKKSaqmlEEARRREDSLSdssqQLQDSLRKKDDRIEELEEALRE 851
Cdd:COG2433 441 ERIERLERELSE-------ARSEERREIRKD----REISRLDREIE----RLERELEEERERIEELKRKLER 497
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
417-1002 |
4.29e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 44.44 E-value: 4.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 417 EEREEEMKQMEVYRSHSKF-MKNKVEQLKEELSSKDAQGEELKKRAAGLQSEVF-AIGQVKQELSRKDTELLALQTKLET 494
Cdd:pfam12128 247 QQEFNTLESAELRLSHLHFgYKSDETLIASRQEERQETSAELNQLLRTLDDQWKeKRDELNGELSAADAAVAKDRSELEA 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 495 LTnqfSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQ-AGEIHDLKDMLD-VK 572
Cdd:pfam12128 327 LE---DQHGAFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQnNRDIAGIKDKLAkIR 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 573 ERKV-------NVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRD----- 640
Cdd:pfam12128 404 EARDrqlavaeDDLQALESELREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATATPELLLQLENFDERIERAREeqeaa 483
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 641 --------RDEREKQEEIDTYKKDLKDLKEKVSLLQGDLSE-------KEASLL--------DLKEHASSLASSGLKKDS 697
Cdd:pfam12128 484 naeverlqSELRQARKRRDQASEALRQASRRLEERQSALDElelqlfpQAGTLLhflrkeapDWEQSIGKVISPELLHRT 563
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 698 RLKTLEIALEQKKEECL--------KMESQLKKAHEATLEARASP------EMSDRIQQLEREMARYKDESSKAQTEVDR 763
Cdd:pfam12128 564 DLDPEVWDGSVGGELNLygvkldlkRIDVPEWAASEEELRERLDKaeealqSAREKQAAAEEQLVQANGELEKASREETF 643
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 764 LLEILKEVE--------NEKNDKDKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLSDSSQQ-LQDS 834
Cdd:pfam12128 644 ARTALKNARldlrrlfdEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTEKQAyWQVV 723
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 835 LRKKDDRIEELEEALrESVQITAEREMVLAQEESARTNAEKQVEELLMAmeKVKQELESMKAKLSSTQQSLAE------- 907
Cdd:pfam12128 724 EGALDAQLALLKAAI-AARRSGAKAELKALETWYKRDLASLGVDPDVIA--KLKREIRTLERKIERIAVRRQEvlryfdw 800
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 908 -KET---HLTNLRAERRKHLEEVLEMKQEaLLAAISEKDANIALLELSSSKKKTQEEVAALKREKDRLVqqlkQQTQNRM 983
Cdd:pfam12128 801 yQETwlqRRPRLATQLSNIERAISELQQQ-LARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCE----MSKLATL 875
|
650
....*....|....*....
gi 1958768395 984 KLMADNYEDDHFRSSRSNQ 1002
Cdd:pfam12128 876 KEDANSEQAQGSIGERLAQ 894
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
209-421 |
5.68e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 43.85 E-value: 5.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 209 TIWKEQYRVVQEENQHMQMTIQALQDELRIQRDlnqlFQQDSSSRTGEPcVAELTE------ENFQRLHAEHERQAKELF 282
Cdd:PHA02562 170 KLNKDKIRELNQQIQTLDMKIDHIQQQIKTYNK----NIEEQRKKNGEN-IARKQNkydelvEEAKTIKAEIEELTDELL 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 283 LLRKTLEEME---LRIETQKQTLNARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKENNM 359
Cdd:PHA02562 245 NLVMDIEDPSaalNKLNTAAAKIKSKIEQFQKVIKMYEKGGVCPTCTQQISEGPDRITKIKDKLKELQHSLEKLDTAIDE 324
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1958768395 360 LREEMHRRFENapdSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSTEEREE 421
Cdd:PHA02562 325 LEEIMDEFNEQ---SKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAK 383
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
739-883 |
6.88e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.60 E-value: 6.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 739 RIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQ--NKKVANLKHKEQVEKKKSAQMLEE 816
Cdd:COG1579 32 ELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVrnNKEYEALQKEIESLKRRISDLEDE 111
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958768395 817 ARRREDSLSDSSQQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAQEESARTNAEKQVEELLMA 883
Cdd:COG1579 112 ILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAAKIPPELLA 178
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
814-1117 |
1.26e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 43.12 E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 814 LEEARRREDSLSDSSQQLQDSLRKKDD-----------RIEELEEALRESVQITAEREMVLAQEESARTNAEKQVEELLM 882
Cdd:TIGR02168 195 LNELERQLKSLERQAEKAERYKELKAElrelelallvlRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 883 AMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRaERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKK-TQEEV 961
Cdd:TIGR02168 275 EVSELEEEIEELQKELYALANEISRLEQQKQILR-ERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEeLKEEL 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 962 AALKREKDRLVQQLKQQTQNRMKLmadnyeDDHFRSSRSNqtnhkpspdqIIQPLLELDQNRSKLKLYIGHLTALchdrd 1041
Cdd:TIGR02168 354 ESLEAELEELEAELEELESRLEEL------EEQLETLRSK----------VAQLELQIASLNNEIERLEARLERL----- 412
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1958768395 1042 plilrgltppasynadgeqaawENELQKMTQEQLQNELEKVEGDNAELQEFANTILQQIADHCPDiLEQVVNALEE 1117
Cdd:TIGR02168 413 ----------------------EDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEE-LERLEEALEE 465
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
425-608 |
1.78e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 42.31 E-value: 1.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 425 QMEVYRSHSKFMKNKVEQLKEELSSKDAQGEELKKR------AAGLQSEVFAIGQVKQELSRKDTELLALQTKLETLTNQ 498
Cdd:COG3206 169 RREEARKALEFLEEQLPELRKELEEAEAALEEFRQKnglvdlSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQ 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 499 FSDSKQHIEVLKES--LTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEI-HDLKDMLDVKERK 575
Cdd:COG3206 249 LGSGPDALPELLQSpvIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQRIlASLEAELEALQAR 328
|
170 180 190
....*....|....*....|....*....|...
gi 1958768395 576 VNVLQKKIEnlqeQLRDKEKQMSSLKERVKSLQ 608
Cdd:COG3206 329 EASLQAQLA----QLEARLAELPELEAELRRLE 357
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
821-991 |
2.34e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.93 E-value: 2.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 821 EDSLSDSSQQLQDSLRKKDDRIEELEEALREsvqitAEREMVLAQEESARTNAEKQVEELLmamekvkQELESMKAKLSS 900
Cdd:COG3206 163 EQNLELRREEARKALEFLEEQLPELRKELEE-----AEAALEEFRQKNGLVDLSEEAKLLL-------QQLSELESQLAE 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 901 TQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEK--DANIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQ 978
Cdd:COG3206 231 ARAELAEAEARLAALRAQLGSGPDALPELLQSPVIQQLRAQlaELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQE 310
|
170
....*....|...
gi 1958768395 979 TQNRMKLMADNYE 991
Cdd:COG3206 311 AQRILASLEAELE 323
|
|
| MARTX_Nterm |
NF012221 |
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ... |
706-876 |
2.40e-03 |
|
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.
Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 42.13 E-value: 2.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 706 LEQKKEECLK----MESQLKKAHEATL-------------EARA-SPEMSDRIQQLE--REMARYKDESSKAQTE--VDR 763
Cdd:NF012221 1574 LEQEKQQQLAaisgSQSQLESTDQNALetngqaqrdaileESRAvTKELTTLAQGLDalDSQATYAGESGDQWRNpfAGG 1653
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 764 LLE-ILKEVENEKNDKDKKIAELERQVKDQNKKVanlkhKEQVEKK-----KSAQMLEEARRR-EDSLSDSSQQLQDSLR 836
Cdd:NF012221 1654 LLDrVQEQLDDAKKISGKQLADAKQRHVDNQQKV-----KDAVAKSeagvaQGEQNQANAEQDiDDAKADAEKRKDDALA 1728
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1958768395 837 KKDD--RIEELEEALRESVQITAEREMVLAQEESARTNAEKQ 876
Cdd:NF012221 1729 KQNEaqQAESDANAAANDAQSRGEQDASAAENKANQAQADAK 1770
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
735-941 |
2.49e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.84 E-value: 2.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 735 EMSDRIQQLEREM-ARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKD-QNKKVANLKHKEQVEKKKSAQ 812
Cdd:PRK05771 54 KLSEALDKLRSYLpKLNPLREEKKKVSVKSLEELIKDVEEELEKIEKEIKELEEEISElENEIKELEQEIERLEPWGNFD 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 813 M-LEEARRREDSLSD----SSQQLQDSLRKKDDRIEELEEALRESV----------QITAEREMVLAQEESARTNAEKQV 877
Cdd:PRK05771 134 LdLSLLLGFKYVSVFvgtvPEDKLEELKLESDVENVEYISTDKGYVyvvvvvlkelSDEVEEELKKLGFERLELEEEGTP 213
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958768395 878 EELLmamEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEmKQEALL-AAISEK 941
Cdd:PRK05771 214 SELI---REIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLEIELE-RAEALSkFLKTDK 274
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
375-538 |
3.37e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.29 E-value: 3.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 375 AKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSTEEREEEMKQMEVYRSHSK------FMKNKVEQLKEELS 448
Cdd:COG4942 48 KEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAellralYRLGRQPPLALLLS 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 449 SKDAQG------------EELKKRAAGLQSEVFAIGQVKQELSRKDTELLALQTKLET----LTNQFSDSKQHIEVLKES 512
Cdd:COG4942 128 PEDFLDavrrlqylkylaPARREQAEELRADLAELAALRAELEAERAELEALLAELEEeraaLEALKAERQKLLARLEKE 207
|
170 180
....*....|....*....|....*.
gi 1958768395 513 LTAKEQRAAILQTEVDALRLRLEEKE 538
Cdd:COG4942 208 LAELAAELAELQQEAEELEALIARLE 233
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
567-812 |
3.91e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.97 E-value: 3.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 567 DMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALADKERTIERLKEQRDRDERek 646
Cdd:COG3883 16 PQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERAR-- 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 647 qeeiDTYKKDLKDLKEKVSLLQGDLSEkeasLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEa 726
Cdd:COG3883 94 ----ALYRSGGSVSYLDVLLGSESFSD----FLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKA- 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 727 tlearaspEMSDRIQQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELERQVKDQNKKVANLKHKEQVE 806
Cdd:COG3883 165 --------ELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAA 236
|
....*.
gi 1958768395 807 KKKSAQ 812
Cdd:COG3883 237 AAAAAA 242
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
384-536 |
4.22e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 41.22 E-value: 4.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 384 IEMKDSKISSMERGLRDLEEEIQMLKSNGALSTEEREEEMKQmevyrshskfmknKVEQLKEELSSKDAQGEELKKRAAG 463
Cdd:COG0542 406 IDSKPEELDELERRLEQLEIEKEALKKEQDEASFERLAELRD-------------ELAELEEELEALKARWEAEKELIEE 472
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 464 LQSevfaigqVKQELSRKDTELLALQTKLETLTNQFSDSKQhieVLKESLTAkEQRAAI------------LQTEVDALr 531
Cdd:COG0542 473 IQE-------LKEELEQRYGKIPELEKELAELEEELAELAP---LLREEVTE-EDIAEVvsrwtgipvgklLEGEREKL- 540
|
....*
gi 1958768395 532 LRLEE 536
Cdd:COG0542 541 LNLEE 545
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
440-847 |
4.54e-03 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 41.19 E-value: 4.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 440 VEQLKEELSSKDAQGEELKKRAAGLQS------EVFAIGQVKQELSRKDTE-LLALQTKLETLTNQFSDSKQHI------ 506
Cdd:PTZ00108 899 TEDYKEFLESETLKEKDVIVDYRDYSTantvhfTVKLNDGVLEQWEEEGIEkVFKLKSTISTTNMVLFDENGKIkkysda 978
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 507 -EVLKE----SLTAKEQRAAILQTEVDALRLRLEEK----------ETMLNKKTK----------------QIQDMAEEK 555
Cdd:PTZ00108 979 lDILKEfylvRLDLYKKRKEYLLGKLERELARLSNKvrfikhvingELVITNAKKkdlvkelkklgyvrfkDIIKKKSEK 1058
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 556 GTQAGEIHDLKDMLDVKERKVNVLQK------------------KIENLQEQLRDKEKQMSSLKER-VKSLQADTTNTDT 616
Cdd:PTZ00108 1059 ITAEEEEGAEEDDEADDEDDEEELGAavsydyllsmpiwsltkeKVEKLNAELEKKEKELEKLKNTtPKDMWLEDLDKFE 1138
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 617 ALTTLEEALADKER-TIERLKEQRDRDEREKQEEIDTYKKDLKDLKEKVSLlQGDLSEKEASLLDLKEHASSLASSGLKK 695
Cdd:PTZ00108 1139 EALEEQEEVEEKEIaKEQRLKSKTKGKASKLRKPKLKKKEKKKKKSSADKS-KKASVVGNSKRVDSDEKRKLDDKPDNKK 1217
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 696 DSRLKTLEIALEQKKEECLKMESQLKKAHEATLEARASPEMSDRIQQLEREMARyKDESSKAQTEVDRLLEILKEVENEK 775
Cdd:PTZ00108 1218 SNSSGSDQEDDEEQKTKPKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKP-KNAPKRVSAVQYSPPPPSKRPDGES 1296
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 776 NDKDKKIAELERQVKDQN------KKVANLKHKEQVEKKKSAQMLEEA---------RRREDSLSDSSqQLQDSLRKKDD 840
Cdd:PTZ00108 1297 NGGSKPSSPTKKKVKKRLegslaaLKKKKKSEKKTARKKKSKTRVKQAsasqssrllRRPRKKKSDSS-SEDDDDSEVDD 1375
|
....*..
gi 1958768395 841 RIEELEE 847
Cdd:PTZ00108 1376 SEDEDDE 1382
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
581-977 |
5.02e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 40.91 E-value: 5.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 581 KKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTAlttlEEALADKERTIERLKEQRDRDEREKQeeidtykkdLKDL 660
Cdd:COG4717 64 RKPELNLKELKELEEELKEAEEKEEEYAELQEELEEL----EEELEELEAELEELREELEKLEKLLQ---------LLPL 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 661 KEKVSLLQGDLSEKEASLLDLKEHASSLASsglkKDSRLKTLEIALEQKKEECLKMESQLKKAHEATLEaraspEMSDRI 740
Cdd:COG4717 131 YQELEALEAELAELPERLEELEERLEELRE----LEEELEELEAELAELQEELEELLEQLSLATEEELQ-----DLAEEL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 741 QQLEREMARYKDESSKAQTEVDRLLEILKEVENEKNDKD--KKIAELERQV----------------------------- 789
Cdd:COG4717 202 EELQQRLAELEEELEEAQEELEELEEELEQLENELEAAAleERLKEARLLLliaaallallglggsllsliltiagvlfl 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 790 ----------KDQNKKVANLKHKEQVEKKKSAQMLEEARRRE--DSLSDSSQQLQDSLRKKDDRIEELEEALRESVQITA 857
Cdd:COG4717 282 vlgllallflLLAREKASLGKEAEELQALPALEELEEEELEEllAALGLPPDLSPEELLELLDRIEELQELLREAEELEE 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 858 EREMVLAQEESARTNAEKQVEELLMAMEKVKQelesmkaklsstQQSLAEKETHLTNLRAERRKHLEEVlemkqEALLAA 937
Cdd:COG4717 362 ELQLEELEQEIAALLAEAGVEDEEELRAALEQ------------AEEYQELKEELEELEEQLEELLGEL-----EELLEA 424
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 1958768395 938 ISEKDANIALLELSSSKKKTQEEVAALKREKDRLVQQLKQ 977
Cdd:COG4717 425 LDEEELEEELEELEEELEELEEELEELREELAELEAELEQ 464
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
812-978 |
5.27e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.05 E-value: 5.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 812 QMLEEARRREDSLSDSsQQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAQEEsartnaekqveellmaMEKVKQEL 891
Cdd:COG4913 242 EALEDAREQIELLEPI-RELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAE----------------LEELRAEL 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 892 ESMKAKLSSTQQSLAEKETHLTNLRAERRKH---LEEVLEMKQEALLAAISEKDANIALLE-----LSSSKKKTQEEVAA 963
Cdd:COG4913 305 ARLEAELERLEARLDALREELDELEAQIRGNggdRLEQLEREIERLERELEERERRRARLEallaaLGLPLPASAEEFAA 384
|
170
....*....|....*
gi 1958768395 964 LKREKDRLVQQLKQQ 978
Cdd:COG4913 385 LRAEAAALLEALEEE 399
|
|
| HMMR_N |
pfam15905 |
Hyaluronan mediated motility receptor N-terminal; HMMR_N is the N-terminal region of ... |
391-582 |
5.31e-03 |
|
Hyaluronan mediated motility receptor N-terminal; HMMR_N is the N-terminal region of eukaryotic hyaluronan-mediated motility receptor proteins. The protein is functionally associated with BRCA1 and thus predicted to be a common, low-penetrance breast cancer candidate.
Pssm-ID: 464932 [Multi-domain] Cd Length: 329 Bit Score: 40.18 E-value: 5.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 391 ISSMERGLRDLEEEIQMLKSNGALSTEEREEEMKQMEVYRSHSKF------MKNKVEQLKEELSSKDAQGEELKKRAAGL 464
Cdd:pfam15905 124 VASLEKQLLELTRVNELLKAKFSEDGTQKKMSSLSMELMKLRNKLeakmkeVMAKQEGMEGKLQVTQKNLEHSKGKVAQL 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 465 QSEVFAIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKK 544
Cdd:pfam15905 204 EEKLVSTEKEKIEEKSETEKLLEYITELSCVSEQVEKYKLDIAQLEELLKEKNDEIESLKQSLEEKEQELSKQIKDLNEK 283
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1958768395 545 TKQIQDMAEEKGTQA--------GEIHDLKDMLDVKERKVNVLQKK 582
Cdd:pfam15905 284 CKLLESEKEELLREYeekeqtlnAELEELKEKLTLEEQEHQKLQQK 329
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
824-987 |
5.61e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.52 E-value: 5.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 824 LSDSSQQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAQEESARTNAEKQVEELLMAMEKVKQELESMKAKLSSTQQ 903
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 904 SLAEKETHLTNLRAERRKHLEEVLEMKQ----EALLAAISEKDANIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQT 979
Cdd:COG4942 91 EIAELRAELEAQKEELAELLRALYRLGRqpplALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELE 170
|
....*...
gi 1958768395 980 QNRMKLMA 987
Cdd:COG4942 171 AERAELEA 178
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
535-644 |
6.58e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 40.53 E-value: 6.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 535 EEKETMLNKKTKQIQDMAEEKGTQAG-EIHDLKDMLdvkERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTN 613
Cdd:PRK12704 38 EEAKRILEEAKKEAEAIKKEALLEAKeEIHKLRNEF---EKELRERRNELQKLEKRLLQKEENLDRKLELLEKREEELEK 114
|
90 100 110
....*....|....*....|....*....|..
gi 1958768395 614 TDTALTTLEEALADKERTIERL-KEQRDRDER 644
Cdd:PRK12704 115 KEKELEQKQQELEKKEEELEELiEEQLQELER 146
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
772-910 |
6.77e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 40.71 E-value: 6.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 772 ENEKNDKDKKIAELERQVKDQNKKVAnlkhkeqvekkKSAQMLEEARRREDSLSDSSQQLQDSLRKKDDRIEELEEALRE 851
Cdd:PRK04863 278 ANERRVHLEEALELRRELYTSRRQLA-----------AEQYRLVEMARELAELNEAESDLEQDYQAASDHLNLVQTALRQ 346
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958768395 852 SVQIT------AEREMVLAQEESARTNAEKQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKET 910
Cdd:PRK04863 347 QEKIEryqadlEELEERLEEQNEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQALDVQQT 411
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
392-608 |
7.18e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 40.26 E-value: 7.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 392 SSMERGLRDLEEEIQMLKSNGALSTEEREEEMKQMEVYRSHSKFMKNKVEQLKEELSSKDAQGEELKKRAAGLQSEVFAI 471
Cdd:pfam07888 34 NRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSEEL 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 472 GQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKetmlnkktkqIQDM 551
Cdd:pfam07888 114 SEEKDALLAQRAAHEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAK----------LQQT 183
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 552 AEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQL---RDKEKQMSSLKERVKSLQ 608
Cdd:pfam07888 184 EEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLttaHRKEAENEALLEELRSLQ 243
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
443-905 |
7.75e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 40.27 E-value: 7.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 443 LKEELSSKDAQGEELKKRAAGLQSEVFAIGQVKQELSR----KDTELLALQTKLETLTNQFSDSKQHIEVLKESltakEQ 518
Cdd:PRK01156 188 LEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIeynnAMDDYNNLKSALNELSSLEDMKNRYESEIKTA----ES 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 519 RAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDML---DVKERKVNVLQKKIENLQ---EQLRD 592
Cdd:PRK01156 264 DLSMELEKNNYYKELEERHMKIINDPVYKNRNYINDYFKYKNDIENKKQILsniDAEINKYHAIIKKLSVLQkdyNDYIK 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 593 KEKQMSSLKERVKSLQadttntdtaltTLEEALADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLKEKVSLLQGDLS 672
Cdd:PRK01156 344 KKSRYDDLNNQILELE-----------GYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELN 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 673 EKEASLLDLKEHASSLASSGLKKDSRLKTLE--IALEQKKEECLKMESQLKKAHEATLEARASPEMS---DRIQQLEREM 747
Cdd:PRK01156 413 EINVKLQDISSKVSSLNQRIRALRENLDELSrnMEMLNGQSVCPVCGTTLGEEKSNHIINHYNEKKSrleEKIREIEIEV 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 748 ARYKDESSKAQTEVDRLL-EILKEVENEKNDKDKKIAELERQVKDQNK-KVANLKHKEQVEKKKSAQMLEEARRREDSLS 825
Cdd:PRK01156 493 KDIDEKIVDLKKRKEYLEsEEINKSINEYNKIESARADLEDIKIKINElKDKHDKYEEIKNRYKSLKLEDLDSKRTSWLN 572
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 826 DSSQQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAQEESARTNAEKQVEELLMAMEKVKQELESMKAKLSSTQQSL 905
Cdd:PRK01156 573 ALAVISLIDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQENKILIEKLRGKI 652
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
706-988 |
8.24e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 40.26 E-value: 8.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 706 LEQKKEECLKMESQLKKAHEATLEAR---------ASPEMSDRIQQLEREMARYKDESSKAQTEVDRLLEILKEVEN--- 773
Cdd:pfam07888 32 LQNRLEECLQERAELLQAQEAANRQRekekerykrDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSAsse 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 774 -----------EKNDKDKKIAELE-----------------RQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDSLS 825
Cdd:pfam07888 112 elseekdallaQRAAHEARIRELEediktltqrvleretelERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLS 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 826 DSSQQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAQeesartnaekqveellmaMEKVKQELESMKAKLSSTQQSL 905
Cdd:pfam07888 192 KEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRKEAE------------------NEALLEELRSLQERLNASERKV 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 906 AEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDANIALLE-----------LSSSKKKTQEEVAALKREKDRLVQQ 974
Cdd:pfam07888 254 EGLGEELSSMAAQRDRTQAELHQARLQAAQLTLQLADASLALREgrarwaqeretLQQSAEADKDRIEKLSAELQRLEER 333
|
330
....*....|....
gi 1958768395 975 LKQQTQNRMKLMAD 988
Cdd:pfam07888 334 LQEERMEREKLEVE 347
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
375-609 |
8.60e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 40.00 E-value: 8.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 375 AKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKS-NGALSTEEREE-EMKQMEVYRShskfmknKVEQLKEELSSKDA 452
Cdd:COG3206 168 LRREEARKALEFLEEQLPELRKELEEAEAALEEFRQkNGLVDLSEEAKlLLQQLSELES-------QLAEARAELAEAEA 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 453 QGEELKKRAAGLQSEVFAIGQvKQELSRKDTELLALQTKLETLTNQFSDS-------KQHIEVLKESLTAKEQRAAI-LQ 524
Cdd:COG3206 241 RLAALRAQLGSGPDALPELLQ-SPVIQQLRAQLAELEAELAELSARYTPNhpdvialRAQIAALRAQLQQEAQRILAsLE 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 525 TEVDALRLRLEEKETMLNKKTKQIQDMAEekgtqageihdlkdmldvkerkvnvLQKKIENLQEQLRDKEKQMSSLKERV 604
Cdd:COG3206 320 AELEALQAREASLQAQLAQLEARLAELPE-------------------------LEAELRRLEREVEVARELYESLLQRL 374
|
....*
gi 1958768395 605 KSLQA 609
Cdd:COG3206 375 EEARL 379
|
|
| PRK08475 |
PRK08475 |
F0F1 ATP synthase subunit B; Validated |
921-992 |
9.07e-03 |
|
F0F1 ATP synthase subunit B; Validated
Pssm-ID: 236272 [Multi-domain] Cd Length: 167 Bit Score: 38.46 E-value: 9.07e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1958768395 921 KHLEEVlemkQEALLAAISEKDAniALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYED 992
Cdd:PRK08475 60 KRLEEI----QEKLKESKEKKED--ALKKLEEAKEKAELIVETAKKEAYILTQKIEKQTKDDIENLIKSFEE 125
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
306-523 |
9.17e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 39.91 E-value: 9.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 306 DESIKKLLEMLQSKGLS---AKATEEDHERTRRLAEAEMHVHHLESLLEQKEKENNMLREEM----HRRFENAPDSAKTK 378
Cdd:PRK05771 15 KSYKDEVLEALHELGVVhieDLKEELSNERLRKLRSLLTKLSEALDKLRSYLPKLNPLREEKkkvsVKSLEELIKDVEEE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 379 ALQTVIEMKD--SKISSMERGLRDLEEEIQMLKSNGALSTE---EREEEMKQMEVYRSHskfmKNKVEQLKEELSS---- 449
Cdd:PRK05771 95 LEKIEKEIKEleEEISELENEIKELEQEIERLEPWGNFDLDlslLLGFKYVSVFVGTVP----EDKLEELKLESDVenve 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 450 -------------------KDAQGEELKKraAGLQS-EVFAIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQH---- 505
Cdd:PRK05771 171 yistdkgyvyvvvvvlkelSDEVEEELKK--LGFERlELEEEGTPSELIREIKEELEEIEKERESLLEELKELAKKylee 248
|
250
....*....|....*...
gi 1958768395 506 IEVLKESLTAKEQRAAIL 523
Cdd:PRK05771 249 LLALYEYLEIELERAEAL 266
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
272-645 |
9.36e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 40.14 E-value: 9.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 272 AEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKGL---SAKATEEDHERTRRLAEAEMHVHHLES 348
Cdd:COG4717 81 KEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLyqeLEALEAELAELPERLEELEERLEELRE 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 349 LLEQKEKENNMLrEEMHRRFENAPDSAKTKALQTVIEMKDsKISSMERGLRDLEEEIQMLKSNGALSTEEREEEMKQMEV 428
Cdd:COG4717 161 LEEELEELEAEL-AELQEELEELLEQLSLATEEELQDLAE-ELEELQQRLAELEEELEEAQEELEELEEELEQLENELEA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 429 YRSHSKFMKNK-----------VEQLKEELSSKDAQGEELKKRAAGLQSEVFAIGQVKQELSRKDTELLALQTKLETLTN 497
Cdd:COG4717 239 AALEERLKEARlllliaaallaLLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEE 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 498 Q----------FSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQ----DMAEEKGTQAGEIH 563
Cdd:COG4717 319 EeleellaalgLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAALLAEAGvedeEELRAALEQAEEYQ 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958768395 564 DLKDMLDVKERKVN----------------VLQKKIENLQEQLRDKEKQMSSLKERVKSLQAdttntDTALTTLEEALAD 627
Cdd:COG4717 399 ELKEELEELEEQLEellgeleellealdeeELEEELEELEEELEELEEELEELREELAELEA-----ELEQLEEDGELAE 473
|
410
....*....|....*...
gi 1958768395 628 KERTIERLKEQRDRDERE 645
Cdd:COG4717 474 LLQELEELKAELRELAEE 491
|
|
| |
