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Conserved domains on  [gi|2217307874|ref|XP_047290744|]
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FLYWCH-type zinc finger-containing protein 1 isoform X13 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FLYWCH_u pfam16662
FLYWCH-type zinc finger-containing protein 1; FLYWCH_u is a region of natively unstructured ...
 7-68 3.53e-27

FLYWCH-type zinc finger-containing protein 1; FLYWCH_u is a region of natively unstructured but conserved sequence that lies between the FLYWCH zinc-finger domains on FLYWCH-type zinc finger-containing protein 1 proteins in higher eukaryotes. The function is not known but the N- and C-termini are likely to be part of the zinc-finger domains specific, to the eukaryotes.


:

Pssm-ID: 406949  Cd Length: 62  Bit Score: 104.14  E-value: 3.53e-27
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217307874   7 QPDMEGLEARRQQEKAVETLQAGQDGPGSQVDTLLRGVDSLLYRRGPGPLTLTRPRPRKRAK 68
Cdd:pfam16662   1 PPDMEGLEARRQQEKAMETLQARPGGPGGQADKLLQGVDSLLYRRGPGTLTLTRPRPRKRAK 62
FLYWCH pfam04500
FLYWCH zinc finger domain; Mutations in the mod(mdg4) gene have effects on variegation (PEV), ...
 96-154 2.01e-17

FLYWCH zinc finger domain; Mutations in the mod(mdg4) gene have effects on variegation (PEV), the properties of insulator sequences, correct path-finding of growing nerve cells, meiotic pairing of chromosomes, and apoptosis. The occurrence of FLYWCH motifs in mod(mdg4) gene product and other proteins is discussed in.


:

Pssm-ID: 461332  Cd Length: 62  Bit Score: 76.61  E-value: 2.01e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217307874  96 FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRAITQ--GRRVTVMRG-HCH 154
Cdd:pfam04500   1 FVRSRRGRPKLVINGYLYTRNKKSGGKIYWRCSQYRKIKCKARVVTDrgGTRVKVTRGeHNH 62
FLYWCH pfam04500
FLYWCH zinc finger domain; Mutations in the mod(mdg4) gene have effects on variegation (PEV), ...
 453-511 2.40e-17

FLYWCH zinc finger domain; Mutations in the mod(mdg4) gene have effects on variegation (PEV), the properties of insulator sequences, correct path-finding of growing nerve cells, meiotic pairing of chromosomes, and apoptosis. The occurrence of FLYWCH motifs in mod(mdg4) gene product and other proteins is discussed in.


:

Pssm-ID: 461332  Cd Length: 62  Bit Score: 76.23  E-value: 2.40e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217307874 453 FLRTSLGGRFLVHESFLYRKEKAAGEKVYWMCRDQARLGCRSRAITQ--GHRIMVMR-SHCH 511
Cdd:pfam04500   1 FVRSRRGRPKLVINGYLYTRNKKSGGKIYWRCSQYRKIKCKARVVTDrgGTRVKVTRgEHNH 62
FLYWCH pfam04500
FLYWCH zinc finger domain; Mutations in the mod(mdg4) gene have effects on variegation (PEV), ...
 362-420 4.93e-17

FLYWCH zinc finger domain; Mutations in the mod(mdg4) gene have effects on variegation (PEV), the properties of insulator sequences, correct path-finding of growing nerve cells, meiotic pairing of chromosomes, and apoptosis. The occurrence of FLYWCH motifs in mod(mdg4) gene product and other proteins is discussed in.


:

Pssm-ID: 461332  Cd Length: 62  Bit Score: 75.46  E-value: 4.93e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217307874 362 FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRAITQ--GRRVMVMRR-HCH 420
Cdd:pfam04500   1 FVRSRRGRPKLVINGYLYTRNKKSGGKIYWRCSQYRKIKCKARVVTDrgGTRVKVTRGeHNH 62
 
Name Accession Description Interval E-value
FLYWCH_u pfam16662
FLYWCH-type zinc finger-containing protein 1; FLYWCH_u is a region of natively unstructured ...
 7-68 3.53e-27

FLYWCH-type zinc finger-containing protein 1; FLYWCH_u is a region of natively unstructured but conserved sequence that lies between the FLYWCH zinc-finger domains on FLYWCH-type zinc finger-containing protein 1 proteins in higher eukaryotes. The function is not known but the N- and C-termini are likely to be part of the zinc-finger domains specific, to the eukaryotes.


Pssm-ID: 406949  Cd Length: 62  Bit Score: 104.14  E-value: 3.53e-27
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217307874   7 QPDMEGLEARRQQEKAVETLQAGQDGPGSQVDTLLRGVDSLLYRRGPGPLTLTRPRPRKRAK 68
Cdd:pfam16662   1 PPDMEGLEARRQQEKAMETLQARPGGPGGQADKLLQGVDSLLYRRGPGTLTLTRPRPRKRAK 62
FLYWCH pfam04500
FLYWCH zinc finger domain; Mutations in the mod(mdg4) gene have effects on variegation (PEV), ...
 96-154 2.01e-17

FLYWCH zinc finger domain; Mutations in the mod(mdg4) gene have effects on variegation (PEV), the properties of insulator sequences, correct path-finding of growing nerve cells, meiotic pairing of chromosomes, and apoptosis. The occurrence of FLYWCH motifs in mod(mdg4) gene product and other proteins is discussed in.


Pssm-ID: 461332  Cd Length: 62  Bit Score: 76.61  E-value: 2.01e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217307874  96 FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRAITQ--GRRVTVMRG-HCH 154
Cdd:pfam04500   1 FVRSRRGRPKLVINGYLYTRNKKSGGKIYWRCSQYRKIKCKARVVTDrgGTRVKVTRGeHNH 62
FLYWCH pfam04500
FLYWCH zinc finger domain; Mutations in the mod(mdg4) gene have effects on variegation (PEV), ...
 453-511 2.40e-17

FLYWCH zinc finger domain; Mutations in the mod(mdg4) gene have effects on variegation (PEV), the properties of insulator sequences, correct path-finding of growing nerve cells, meiotic pairing of chromosomes, and apoptosis. The occurrence of FLYWCH motifs in mod(mdg4) gene product and other proteins is discussed in.


Pssm-ID: 461332  Cd Length: 62  Bit Score: 76.23  E-value: 2.40e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217307874 453 FLRTSLGGRFLVHESFLYRKEKAAGEKVYWMCRDQARLGCRSRAITQ--GHRIMVMR-SHCH 511
Cdd:pfam04500   1 FVRSRRGRPKLVINGYLYTRNKKSGGKIYWRCSQYRKIKCKARVVTDrgGTRVKVTRgEHNH 62
FLYWCH pfam04500
FLYWCH zinc finger domain; Mutations in the mod(mdg4) gene have effects on variegation (PEV), ...
 362-420 4.93e-17

FLYWCH zinc finger domain; Mutations in the mod(mdg4) gene have effects on variegation (PEV), the properties of insulator sequences, correct path-finding of growing nerve cells, meiotic pairing of chromosomes, and apoptosis. The occurrence of FLYWCH motifs in mod(mdg4) gene product and other proteins is discussed in.


Pssm-ID: 461332  Cd Length: 62  Bit Score: 75.46  E-value: 4.93e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217307874 362 FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRAITQ--GRRVMVMRR-HCH 420
Cdd:pfam04500   1 FVRSRRGRPKLVINGYLYTRNKKSGGKIYWRCSQYRKIKCKARVVTDrgGTRVKVTRGeHNH 62
 
Name Accession Description Interval E-value
FLYWCH_u pfam16662
FLYWCH-type zinc finger-containing protein 1; FLYWCH_u is a region of natively unstructured ...
 7-68 3.53e-27

FLYWCH-type zinc finger-containing protein 1; FLYWCH_u is a region of natively unstructured but conserved sequence that lies between the FLYWCH zinc-finger domains on FLYWCH-type zinc finger-containing protein 1 proteins in higher eukaryotes. The function is not known but the N- and C-termini are likely to be part of the zinc-finger domains specific, to the eukaryotes.


Pssm-ID: 406949  Cd Length: 62  Bit Score: 104.14  E-value: 3.53e-27
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217307874   7 QPDMEGLEARRQQEKAVETLQAGQDGPGSQVDTLLRGVDSLLYRRGPGPLTLTRPRPRKRAK 68
Cdd:pfam16662   1 PPDMEGLEARRQQEKAMETLQARPGGPGGQADKLLQGVDSLLYRRGPGTLTLTRPRPRKRAK 62
FLYWCH pfam04500
FLYWCH zinc finger domain; Mutations in the mod(mdg4) gene have effects on variegation (PEV), ...
 96-154 2.01e-17

FLYWCH zinc finger domain; Mutations in the mod(mdg4) gene have effects on variegation (PEV), the properties of insulator sequences, correct path-finding of growing nerve cells, meiotic pairing of chromosomes, and apoptosis. The occurrence of FLYWCH motifs in mod(mdg4) gene product and other proteins is discussed in.


Pssm-ID: 461332  Cd Length: 62  Bit Score: 76.61  E-value: 2.01e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217307874  96 FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRAITQ--GRRVTVMRG-HCH 154
Cdd:pfam04500   1 FVRSRRGRPKLVINGYLYTRNKKSGGKIYWRCSQYRKIKCKARVVTDrgGTRVKVTRGeHNH 62
FLYWCH pfam04500
FLYWCH zinc finger domain; Mutations in the mod(mdg4) gene have effects on variegation (PEV), ...
 453-511 2.40e-17

FLYWCH zinc finger domain; Mutations in the mod(mdg4) gene have effects on variegation (PEV), the properties of insulator sequences, correct path-finding of growing nerve cells, meiotic pairing of chromosomes, and apoptosis. The occurrence of FLYWCH motifs in mod(mdg4) gene product and other proteins is discussed in.


Pssm-ID: 461332  Cd Length: 62  Bit Score: 76.23  E-value: 2.40e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217307874 453 FLRTSLGGRFLVHESFLYRKEKAAGEKVYWMCRDQARLGCRSRAITQ--GHRIMVMR-SHCH 511
Cdd:pfam04500   1 FVRSRRGRPKLVINGYLYTRNKKSGGKIYWRCSQYRKIKCKARVVTDrgGTRVKVTRgEHNH 62
FLYWCH pfam04500
FLYWCH zinc finger domain; Mutations in the mod(mdg4) gene have effects on variegation (PEV), ...
 362-420 4.93e-17

FLYWCH zinc finger domain; Mutations in the mod(mdg4) gene have effects on variegation (PEV), the properties of insulator sequences, correct path-finding of growing nerve cells, meiotic pairing of chromosomes, and apoptosis. The occurrence of FLYWCH motifs in mod(mdg4) gene product and other proteins is discussed in.


Pssm-ID: 461332  Cd Length: 62  Bit Score: 75.46  E-value: 4.93e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217307874 362 FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRAITQ--GRRVMVMRR-HCH 420
Cdd:pfam04500   1 FVRSRRGRPKLVINGYLYTRNKKSGGKIYWRCSQYRKIKCKARVVTDrgGTRVKVTRGeHNH 62
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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