|
Name |
Accession |
Description |
Interval |
E-value |
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
318-820 |
4.07e-26 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 117.35 E-value: 4.07e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 318 QLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAEELRQEREKLQAAQE 397
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRR 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 398 ELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAE 477
Cdd:COG1196 313 ELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEAL 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 478 AGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEELR 557
Cdd:COG1196 393 RAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEA 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 558 LEQEVARQGLEGSLRVAEQAQEALEQQL--------PTLRHERSQLQEQLAQLSRQLSGREQELEQARREA------QRQ 623
Cdd:COG1196 473 ALLEAALAELLEELAEAAARLLLLLEAEadyegfleGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAAlaaalqNIV 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 624 VEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAE--GQALL 701
Cdd:COG1196 553 VEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRtlVAARL 632
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 702 LAKETLTGELAGLRQQIIATQEKASLDKELMAQKLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEAERAQLQS 781
Cdd:COG1196 633 EAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEA 712
|
490 500 510
....*....|....*....|....*....|....*....
gi 2217272553 782 QLQREQEELLARLEAEKEELSEEIAALQQERDEGLLLAE 820
Cdd:COG1196 713 EEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEE 751
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
376-1189 |
1.12e-24 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 112.84 E-value: 1.12e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 376 QVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQdgarvrreLERSHRQLEQLEgkRSVLAKELVEVREALSRA 455
Cdd:TIGR02168 175 KETERKLERTRENLDRLEDILNELERQLKSLERQAEKAER--------YKELKAELRELE--LALLVLRLEELREELEEL 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 456 TLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGR 535
Cdd:TIGR02168 245 QEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQ 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 536 QRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQ 615
Cdd:TIGR02168 325 LEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIER 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 616 ARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAEREGR-----TLSEEATRLRLEKEALEGSLFEVQRQLAQLEARR 690
Cdd:TIGR02168 405 LEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELeeeleELQEELERLEEALEELREELEEAEQALDAAEREL 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 691 EQLEAEGQALLLAKETLTGELAGLRQQIIATQEKASLDKELMAQKLVQAEREAQASlreqrAAHEEDLQRLQREKEAAWR 770
Cdd:TIGR02168 485 AQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIE-----AALGGRLQAVVVENLNAAK 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 771 elEAERAQLQSQLQREQEELLARLEAEKEELSEEIAALQQERDEGLLL----AESEKQQALS-------LKESEKTALsE 839
Cdd:TIGR02168 560 --KAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKdlvkFDPKLRKALSyllggvlVVDDLDNAL-E 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 840 KLMGTRHSLATISLEMERQKRDAQSRQEQDRSTVNAL--TSELRDLraqreeaaaahAQEVRRLQEQARDLGKQRDSCLR 917
Cdd:TIGR02168 637 LAKKLRPGYRIVTLDGDLVRPGGVITGGSAKTNSSILerRREIEEL-----------EEKIEELEEKIAELEKALAELRK 705
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 918 EAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREALRRSNEELRSAVKKAESERI 997
Cdd:TIGR02168 706 ELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIE 785
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 998 SLKLANEDKEQKLALLEEARTAVGKEAGELRTGLQEVERSRLEARRELQELRRQMKMLDSENTRLGRELAELQGRLALGE 1077
Cdd:TIGR02168 786 ELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELE 865
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1078 RAEKESRRETLGLRQRLLKGEASLEVMRQELQVAQRKLQEQEGEfRTRERRLLGSLEEARGTEKQQLDHARGLELKLEAA 1157
Cdd:TIGR02168 866 ELIEELESELEALLNERASLEEALALLRSELEELSEELRELESK-RSELRRELEELREKLAQLELRLEGLEVRIDNLQER 944
|
810 820 830
....*....|....*....|....*....|..
gi 2217272553 1158 RAEAAELGLRLSAAEGRAQGLEAELARVEVQR 1189
Cdd:TIGR02168 945 LSEEYSLTLEEAEALENKIEDDEEEARRRLKR 976
|
|
| Rootletin |
pfam15035 |
Ciliary rootlet component, centrosome cohesion; |
1-95 |
4.79e-24 |
|
Ciliary rootlet component, centrosome cohesion;
Pssm-ID: 464459 [Multi-domain] Cd Length: 190 Bit Score: 101.27 E-value: 4.79e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1 MLREQLDQAGSANQALSEDIRKVTNDWTRCRKELEHREAAWRREEESFNAYFSNEHSRLLLLWRQVVGFRRLVSEVKMFT 80
Cdd:pfam15035 96 LLREQLEQASRANEALREDLQKLTNDWERAREELEQKESEWRKEEEAFNEYLSSEHSRLLSLWREVVAVRRQFTELKTAT 175
|
90
....*....|....*
gi 2217272553 81 ERDLLQLGGELARTS 95
Cdd:pfam15035 176 ERDLSELKTEFSRTS 190
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
397-996 |
2.95e-23 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 108.10 E-value: 2.95e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 397 EELRRQRDRLEEEQEDAVQdGARVRRELERshRQLEQLEGKRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKA 476
Cdd:COG1196 196 GELERQLEPLERQAEKAER-YRELKEELKE--LEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEEL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 477 EAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEatvareeqerLEEL 556
Cdd:COG1196 273 RLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEE----------LEEL 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 557 RLEQEVA---RQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAARE 633
Cdd:COG1196 343 EEELEEAeeeLEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEE 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 634 KEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQALLLAKETLTGELAG 713
Cdd:COG1196 423 LEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEAD 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 714 LRQQIIATQEKASLDKELMAQKLVQAEREAQAslREQRAAHEEDLQRLQREKEAAWRELEAERAQLQSQLQREQEELlaR 793
Cdd:COG1196 503 YEGFLEGVKAALLLAGLRGLAGAVAVLIGVEA--AYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFL--P 578
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 794 LEAEKEELSEEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLATISLEMERQKRDAQSRQEQDRSTV 873
Cdd:COG1196 579 LDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSA 658
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 874 NALTSELRdlraqREEAAAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEG 953
Cdd:COG1196 659 GGSLTGGS-----RRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAE 733
|
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 2217272553 954 REVQRQEAGELRRSLGEGAKEREALRRSNEELRSAVKKAESER 996
Cdd:COG1196 734 REELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREI 776
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
293-1073 |
1.10e-22 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 106.29 E-value: 1.10e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 293 KRQLQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLA 372
Cdd:TIGR02168 222 LRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 373 HSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQedavqdgARVRRELErshRQLEQLEGKRSVLAKELVEVREAL 452
Cdd:TIGR02168 302 QQKQILRERLANLERQLEELEAQLEELESKLDELAEEL-------AELEEKLE---ELKEELESLEAELEELEAELEELE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 453 SRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLA-QDKLDLNRLVAQLEEEKSA 531
Cdd:TIGR02168 372 SRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEeAELKELQAELEELEEELEE 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 532 LQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALE---QQLPTLRHERSQLQEQLAQLSRQLS- 607
Cdd:TIGR02168 452 LQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEgfsEGVKALLKNQSGLSGILGVLSELISv 531
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 608 --GREQELEQARREAQRQ--VEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEvqrql 683
Cdd:TIGR02168 532 deGYEAAIEAALGGRLQAvvVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKD----- 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 684 aqLEARREQLEAEGQALL---LAKETLTGELAgLRQQIIATQEKASLDKELMAQK--LVQAEREAQASLREQRAAHEEdL 758
Cdd:TIGR02168 607 --LVKFDPKLRKALSYLLggvLVVDDLDNALE-LAKKLRPGYRIVTLDGDLVRPGgvITGGSAKTNSSILERRREIEE-L 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 759 QRLQREKEAAWRELEAERAQL---QSQLQREQEELLARLEAEKEELSEEIAALQQERDEGLLLAESEKQQALSLKES--E 833
Cdd:TIGR02168 683 EEKIEELEEKIAELEKALAELrkeLEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELeaE 762
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 834 KTALSEKLMGTRHSLATISLEMERQKRDAQSRQEQ---DRSTVNALTSELRDLRAQREEAAAAHAQEVRRL---QEQARD 907
Cdd:TIGR02168 763 IEELEERLEEAEEELAEAEAEIEELEAQIEQLKEElkaLREALDELRAELTLLNEEAANLRERLESLERRIaatERRLED 842
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 908 LGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREALRRSNEELRS 987
Cdd:TIGR02168 843 LEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELRE 922
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 988 AVKKAESERISLKLanedkeQKLALLEEARTAVGKEAGELRTGLQEVERSRLEARRELQELRRQMKMLDSENTRLGRELA 1067
Cdd:TIGR02168 923 KLAQLELRLEGLEV------RIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYE 996
|
....*.
gi 2217272553 1068 ELQGRL 1073
Cdd:TIGR02168 997 ELKERY 1002
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
309-910 |
1.60e-22 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 105.40 E-value: 1.60e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 309 QDLLGTLRKQLSDSESER------RALEEQLQRLrdktdgamqaheDAQREVQRLRSANELLSREKSNLAHSLQVAQQQA 382
Cdd:COG1196 192 EDILGELERQLEPLERQAekaeryRELKEELKEL------------EAELLLLKLRELEAELEELEAELEELEAELEELE 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 383 EELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRATLQRDML 462
Cdd:COG1196 260 AELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEEL 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 463 QAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQE 542
Cdd:COG1196 340 EELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERL 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 543 ATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQR 622
Cdd:COG1196 420 EEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEA 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 623 QVEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLekEALEGSLFEVQRQLAQLEARREQLEAEGQALLL 702
Cdd:COG1196 500 EADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAAL--AAALQNIVVEDDEVAAAAIEYLKAAKAGRATFL 577
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 703 AKETLTGELAGLRQQIIATQEKASLDKELMAQKLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEAERAQLQSQ 782
Cdd:COG1196 578 PLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGS 657
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 783 LQREQEELLARLEAEKEELSEEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKlmgtRHSLATISLEMERQKRDA 862
Cdd:COG1196 658 AGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEE----RLEEELEEEALEEQLEAE 733
|
570 580 590 600
....*....|....*....|....*....|....*....|....*...
gi 2217272553 863 QSRQEQDRSTVNALTSELRDLRAQREEAAAAHAQEVRRLQEQARDLGK 910
Cdd:COG1196 734 REELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALGP 781
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
579-1131 |
1.70e-21 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 102.32 E-value: 1.70e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 579 EALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAEREGRTL 658
Cdd:COG1196 235 RELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRREL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 659 SEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQALLLAKETLTGELAGLRQQIIATQEkaSLDKELMAQKLVQ 738
Cdd:COG1196 315 EERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEE--ELEELAEELLEAL 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 739 AEREAQASLREQRAAHEEDLQRLQREKEAAWRELEAERAQLQSQLQREQEELLARLEAEKEELSEEIAALQQERDEGLLL 818
Cdd:COG1196 393 RAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEA 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 819 AESEKQQALSLKESEKTALSEKLMGTRHSLATISLEMERQKRDAQSRQEQDRSTVNALTSELRDLRAQREEAAAAHAQEV 898
Cdd:COG1196 473 ALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIV 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 899 RRLQEQArdlgKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREAL 978
Cdd:COG1196 553 VEDDEVA----AAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLV 628
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 979 RRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARTAVGKEAGELRTGLQEVERSRLEARRELQELRRQMKMLDSE 1058
Cdd:COG1196 629 AARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERE 708
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2217272553 1059 NTRLGRELAELQgRLALGERAEKESRRETLGLRQRLLKGEASLEVMRQELQVAQRKLQEQEGEFRTRERRLLG 1131
Cdd:COG1196 709 LAEAEEERLEEE-LEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALG 780
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
592-1184 |
3.17e-21 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 101.17 E-value: 3.17e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 592 RSQLQEQLAQLSRQ----LSGREQELEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRL 667
Cdd:COG1196 195 LGELERQLEPLERQaekaERYRELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 668 EKEALEGSLFEVQRQLAQLEARREQLEAEGQALLLAKETLTGELAGLRQQIIATQEKASLDKELMAQKlvQAEREAQASL 747
Cdd:COG1196 275 ELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEEL--EEELEEAEEE 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 748 REQRAAHEEDLQRLQREKEAAWRELEAERAQLQSQLQREQEELLARLEAEKEELSEEIAALQqeRDEGLLLAESEKQQAL 827
Cdd:COG1196 353 LEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLE--RLERLEEELEELEEAL 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 828 SLKESEKTALSEKLMGTRHSLATISLEMERQKRDAQSRQEQDRSTVNALTSELRDLRAQREEAAAAHAQEVRRLQEQARD 907
Cdd:COG1196 431 AELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGV 510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 908 LGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREALRRSNEELRS 987
Cdd:COG1196 511 KAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAA 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 988 AVKKAESERISLKLANEDKEQKLALLEEARTAVGKEAGELRTGLQEVERSRLEARRElqELRRQMKMLDSENTRLGRELA 1067
Cdd:COG1196 591 ALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLR--EVTLEGEGGSAGGSLTGGSRR 668
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1068 ELQGRLALGERAEKESRRETLGLRQRLLKGEASLEVMRQELQVAQRKLQEQEGEFRTRERRLLGSLEeargtekQQLDHA 1147
Cdd:COG1196 669 ELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAERE-------ELLEEL 741
|
570 580 590
....*....|....*....|....*....|....*..
gi 2217272553 1148 RGLELKLEAARAEAAELGLRLSAAEGRAQGLEAELAR 1184
Cdd:COG1196 742 LEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
898-1690 |
9.65e-21 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 100.13 E-value: 9.65e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 898 VRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREA 977
Cdd:TIGR02168 234 LEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLAN 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 978 LRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARTAV-------GKEAGELRTGLQEVERSRLEARRELQELRR 1050
Cdd:TIGR02168 314 LERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLeaeleelEAELEELESRLEELEEQLETLRSKVAQLEL 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1051 QMKMLDSENTRLGRELAELQGRLA-LGERAEKESRRETLGLRQRLLKGEASLEVMRQELQVAQRKLQEQEGEFRTRERRL 1129
Cdd:TIGR02168 394 QIASLNNEIERLEARLERLEDRRErLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEA 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1130 LGSLEEARGTEKQQLDHARGLELKLEAARAEAAELGLRLSAAEGRAQGLEAELARVEVQ---RRAAEAQLGGLRSALrrg 1206
Cdd:TIGR02168 474 EQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDegyEAAIEAALGGRLQAV--- 550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1207 lglgrapspaprpvpgspardapaegsgEGLNSPSTLECSPGSQPPSPGPATSPASPDLDPEAVRGALREFLQELRSAQR 1286
Cdd:TIGR02168 551 ----------------------------VVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLG 602
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1287 ERDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEEARR-SVDGRLSGVQAELALQEESVRRsererratldqv 1365
Cdd:TIGR02168 603 VAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKLRPGYRIvTLDGDLVRPGGVITGGSAKTNS------------ 670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1366 atlerSLQATESELRASQEKISKMKANETKLEGDKRRLKEVLDASESRTVKLELQRRSLEGELQRSRLGLSDREAQAQAL 1445
Cdd:TIGR02168 671 -----SILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQL 745
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1446 QDRVDSLQRQVADSEVKAGTLQLTVERLNGALAKVEESEGALRDKVRGLTEALAQSSASLNSTRDKNLHLQKALTACEHD 1525
Cdd:TIGR02168 746 EERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRER 825
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1526 RQVLQERLDAARQALSEARKQSSSLGEQVQTLRGEVADLELQRVEAEGQLQQLREVLRQRQEGEAAALNTVQKLQDERRL 1605
Cdd:TIGR02168 826 LESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRE 905
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1606 LQERLGSLQRALAQLEAekrEVERSALRLEKDRVALRRTLDKVEREKLRSHEDTVRLSAEkgrLDRTLTGAELELAEAQR 1685
Cdd:TIGR02168 906 LESKRSELRRELEELRE---KLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENK---IEDDEEEARRRLKRLEN 979
|
....*
gi 2217272553 1686 QIQQL 1690
Cdd:TIGR02168 980 KIKEL 984
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
462-1204 |
1.03e-20 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 99.75 E-value: 1.03e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 462 LQAEKAEVAEALtKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQ 541
Cdd:TIGR02168 207 RQAEKAERYKEL-KAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEE 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 542 eatvareeqerleelrleqevarqgLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQ 621
Cdd:TIGR02168 286 -------------------------LQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELA 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 622 RQVEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEkealegsLFEVQRQLAQLEARREQLEAEgqall 701
Cdd:TIGR02168 341 ELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSK-------VAQLELQIASLNNEIERLEAR----- 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 702 laKETLTGELAGLRQQIIATQEKASLDKELMAQKLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEAERAQLQS 781
Cdd:TIGR02168 409 --LERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQ 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 782 QLQREqeELLARLEAEKEELSEEIAALQQERdEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLATISLEMERQKRD 861
Cdd:TIGR02168 487 LQARL--DSLERLQENLEGFSEGVKALLKNQ-SGLSGILGVLSELISVDEGYEAAIEAALGGRLQAVVVENLNAAKKAIA 563
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 862 AQSRQEQDRSTVNALTSELRDLRAQREEAAAAHAQEVRRL-------QEQARDLGKQRDSCLREAEELRTQLRLL----- 929
Cdd:TIGR02168 564 FLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVakdlvkfDPKLRKALSYLLGGVLVVDDLDNALELAkklrp 643
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 930 -------------------------EDARDGLRRELLEAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREALRRSNEE 984
Cdd:TIGR02168 644 gyrivtldgdlvrpggvitggsaktNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEE 723
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 985 LRSAVKKAESERISLKLANEDKEQKLALLEEARTAVGKEAGELRTGLQEVERSRLEARRELQELRRQMKMLDSENTRLGR 1064
Cdd:TIGR02168 724 LSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALRE 803
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1065 ELAELQGRLALGERAEKESRRETLGLRQRLLKGEASLEVMRQELQVAQRKL------QEQEGEFRTRERRLLGSLEEARG 1138
Cdd:TIGR02168 804 ALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIeslaaeIEELEELIEELESELEALLNERA 883
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2217272553 1139 TEKQQLDHARgleLKLEAARAEAAELGLRLSAAEGRAQGLEAELARVEVQRRAAEAQLGGLRSALR 1204
Cdd:TIGR02168 884 SLEEALALLR---SELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLS 946
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
942-1755 |
7.29e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 93.97 E-value: 7.29e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 942 EAQRKLRESQEGREVQRQEAGELRR---SLGEGAKEREALRRSNEELRSAvkkaesERISLKLANEDKEQKLALLEEART 1018
Cdd:TIGR02168 176 ETERKLERTRENLDRLEDILNELERqlkSLERQAEKAERYKELKAELREL------ELALLVLRLEELREELEELQEELK 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1019 AVGKEAGELRTGLQEVERSRLEARRELQELRRQMKMLDSENTRLGRELAELQGRLALGERAEKESRRETLGLRQRLLKGE 1098
Cdd:TIGR02168 250 EAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELE 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1099 ASLEVMRQELQVAQRKLQEQEGEFRtrerRLLGSLEEARGTEKQQLDHARGLELKLEAARAEAAELGLRLSAAEGRAQGL 1178
Cdd:TIGR02168 330 SKLDELAEELAELEEKLEELKEELE----SLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERL 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1179 EAELARVEVQRRAAEAQLGGLRSALRRglglgrapspaprpvpgsPARDAPAEGSGEGLNSPSTLECSPGSQPPSPgpat 1258
Cdd:TIGR02168 406 EARLERLEDRRERLQQEIEELLKKLEE------------------AELKELQAELEELEEELEELQEELERLEEAL---- 463
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1259 spaspdldpEAVRGALREFLQELRSAQRERDELRTQTSALNRQLAEMEAERDSAtsrarqlqKAVAESEEARRSVDGRLS 1338
Cdd:TIGR02168 464 ---------EELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGV--------KALLKNQSGLSGILGVLS 526
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1339 ---------GVQAELALQEESVRRSERERRATLDQVATLERSLQATESELRASQEKISKMKANETKLEGDKRRLKEVLDA 1409
Cdd:TIGR02168 527 elisvdegyEAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKD 606
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1410 SESRTVKLelqRRSLEGELQRSRLglSDREAQAQALQDRVDSLQRQVadseVKAGTLQLTVERLNGALAKVEESEGALRD 1489
Cdd:TIGR02168 607 LVKFDPKL---RKALSYLLGGVLV--VDDLDNALELAKKLRPGYRIV----TLDGDLVRPGGVITGGSAKTNSSILERRR 677
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1490 KVRGLTEALAQSSASLNSTRDKNLHLQKALTACEHDRQVLQERLDAARQALSEARKQSSSLGEQVQTLRGEVADLELQRV 1569
Cdd:TIGR02168 678 EIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELT 757
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1570 EAEGQLQQLREVLRQRQEGEAAALNTVQKLQDERRLLQERLGSLQRALAQLEAEKREVERSALRLEKDRVALRRTLDKVE 1649
Cdd:TIGR02168 758 ELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATE 837
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1650 REKLRSHEDTVRLSAEKGRLDRTLTGAELELAEAQRQIQQLEAQVVVLEQSHSPAQLEVDAQQQQLELQQevERLRSAQA 1729
Cdd:TIGR02168 838 RRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELE--SKRSELRR 915
|
810 820
....*....|....*....|....*.
gi 2217272553 1730 QTERtLEARERAHRQRVSTLKGQLQQ 1755
Cdd:TIGR02168 916 ELEE-LREKLAQLELRLEGLEVRIDN 940
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
281-950 |
2.55e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 92.04 E-value: 2.55e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 281 SSTLALIHSALHKRQLQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSA 360
Cdd:TIGR02168 259 TAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEE 338
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 361 NELLSREKSNLAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSV 440
Cdd:TIGR02168 339 LAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRER 418
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 441 LAKE-------------------LVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSL 501
Cdd:TIGR02168 419 LQQEieellkkleeaelkelqaeLEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQ 498
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 502 SKLSALNESLAQDKLDLNRL-------------------------------------------VAQLEEEKS-------- 530
Cdd:TIGR02168 499 ENLEGFSEGVKALLKNQSGLsgilgvlselisvdegyeaaieaalggrlqavvvenlnaakkaIAFLKQNELgrvtflpl 578
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 531 ------ALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHER------------ 592
Cdd:TIGR02168 579 dsikgtEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKLRPGYRivtldgdlvrpg 658
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 593 ---------------------SQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAA 651
Cdd:TIGR02168 659 gvitggsaktnssilerrreiEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARL 738
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 652 EREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQALLLAKETLTGELAGLRQQIIATQEKASLDKEL 731
Cdd:TIGR02168 739 EAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEE 818
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 732 MAQKlvqaeREAQASLREQRAAHEEDLQRLQREKEAAwRELEAERAQLQSQLQREQEELLARLEAEKEELSEEIAALQQE 811
Cdd:TIGR02168 819 AANL-----RERLESLERRIAATERRLEDLEEQIEEL-SEDIESLAAEIEELEELIEELESELEALLNERASLEEALALL 892
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 812 RDEglllaESEKQQALSLKESEKTALSEKLMGTRHSLATISLEMERQKRDAQSRQEQDRSTVNALTSELRDLRAQREEAA 891
Cdd:TIGR02168 893 RSE-----LEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDE 967
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*....
gi 2217272553 892 AAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDglrrELLEAQRKLRES 950
Cdd:TIGR02168 968 EEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKE----DLTEAKETLEEA 1022
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
899-1457 |
3.00e-18 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 91.54 E-value: 3.00e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 899 RRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREVQRQEAGELRRSL-------GEG 971
Cdd:COG1196 235 RELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIarleerrREL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 972 AKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARTAVGKEAGELRTGLQEVERSRLEARRELQELRRQ 1051
Cdd:COG1196 315 EERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1052 MKMLDSENTRLGRELAELQGRLalgERAEKEsrretlglRQRLLKGEASLEVMRQELQVAQRKLQEQEGEFRTRERRLLG 1131
Cdd:COG1196 395 AAELAAQLEELEEAEEALLERL---ERLEEE--------LEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLE 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1132 SLEEARGTEKQQLDHARGLELKLEAARAEAAELGLRLSAAEGRAQGleaelarveVQRRAAEAQLGGLRSALRRGLGLGR 1211
Cdd:COG1196 464 LLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEG---------VKAALLLAGLRGLAGAVAVLIGVEA 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1212 APSPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPDLDPEAVRGALREFLQELRSAQRERDEL 1291
Cdd:COG1196 535 AYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADAR 614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1292 RTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEEARRSVDGRLSGVQAELALQEESVRRSERERRATLDQVATLERS 1371
Cdd:COG1196 615 YYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELE 694
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1372 LQATESELRASQEKISKMKANETKLEGDKRRLKEVLDASESRTVKLELQrrsLEGELQRSRLGLSDREAQAQALQDRVDS 1451
Cdd:COG1196 695 LEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLE---EEELLEEEALEELPEPPDLEELERELER 771
|
....*.
gi 2217272553 1452 LQRQVA 1457
Cdd:COG1196 772 LEREIE 777
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
617-1191 |
1.36e-17 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 89.61 E-value: 1.36e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 617 RREAQRQVEALER---AAREKEALAKEHAGLAVQLVAAERegRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQL 693
Cdd:COG1196 195 LGELERQLEPLERqaeKAERYRELKEELKELEAELLLLKL--RELEAELEELEAELEELEAELEELEAELAELEAELEEL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 694 EAEGQALLLAKETLTGELAGLRQQIIATQEKASLDKELMAQKLVQAER--EAQASLREQRAAHEEDLQRLQREKEAAWRE 771
Cdd:COG1196 273 RLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEEleEELAELEEELEELEEELEELEEELEEAEEE 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 772 LEAERAQLQSQLQreqeellarleaekeELSEEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLATI 851
Cdd:COG1196 353 LEEAEAELAEAEE---------------ALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLE 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 852 SLEMERQKRDAQSRQ-EQDRSTVNALTSELRDLRAQREEAAAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLE 930
Cdd:COG1196 418 RLEEELEELEEALAElEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLL 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 931 DARDGLRRELLEAQRKLRESQEGREVQ----------RQEAGELRRSLGEGAKEREALRRSNEELRSAVKKAESERISLK 1000
Cdd:COG1196 498 EAEADYEGFLEGVKAALLLAGLRGLAGavavligveaAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFL 577
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1001 LANEDKEQKLALLEEARTAVG----------KEAGELRTGLQEVERSRLEARRELQELRRQMKMLDSENTRLGRELAELQ 1070
Cdd:COG1196 578 PLDKIRARAALAAALARGAIGaavdlvasdlREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGS 657
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1071 GRLALGERAEKESRRETLGLRQRLLKGEASLEVMRQELQVAQRKLQEQEGEFRTRERRLLGSLEEARGTEKQQLDHARGL 1150
Cdd:COG1196 658 AGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREEL 737
|
570 580 590 600
....*....|....*....|....*....|....*....|.
gi 2217272553 1151 ELKLEAARAEAAELGLRLSAAEGRAQGLEAELARVEVQRRA 1191
Cdd:COG1196 738 LEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1280-1762 |
1.51e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 86.14 E-value: 1.51e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1280 ELRSAQRERDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEEARRSVDGRLSGVQAELALQEESVRRSERERR 1359
Cdd:COG1196 226 EAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIA 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1360 ATLDQVATLERSLQATESELRASQEKISKMKANETKLEGDKRRLKEVLDASESRTVKLELQRRSLEGELQRSRLGLSDRE 1439
Cdd:COG1196 306 RLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELA 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1440 AQAQALQDRVDSLQRQVADSEVKAGTLQLTVERLNGALAKVEESEGALRDKVRGLTEALAQSSASLNSTRDKNLHLQKAL 1519
Cdd:COG1196 386 EELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELL 465
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1520 TACEHDRQVLQERLDAARQALSEARKQSSSLGEQVQTLRGEVAD-LELQRVEAEGQLQQLREVLRQRQEGEAAALNTVqk 1598
Cdd:COG1196 466 AELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGvKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAA-- 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1599 lqDERRLLQERLGSLQRALAQLEAEKREVERSALRLEKDRVALRRTLDKvEREKLRSHEDTVRLSAEKGRLDRTLTGAEL 1678
Cdd:COG1196 544 --LAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAA-ALARGAIGAAVDLVASDLREADARYYVLGD 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1679 ELAEAQRQIQQLEAQVVVLEQSHSPAQLEVDAQQQQLELQQEVERLRSAQAQTERTLEARERAHRQRVSTLKGQLQQELR 1758
Cdd:COG1196 621 TLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALL 700
|
....
gi 2217272553 1759 RSSA 1762
Cdd:COG1196 701 AEEE 704
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
380-1146 |
1.76e-16 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 85.89 E-value: 1.76e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 380 QQAEELRQEREKLQAAQEELRRQRDR----LEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRA 455
Cdd:TIGR02169 198 QQLERLRREREKAERYQALLKEKREYegyeLLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEEL 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 456 TLQRDML--------QAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEE 527
Cdd:TIGR02169 278 NKKIKDLgeeeqlrvKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTE 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 528 EKSALQGRQRQAEQEAtvareeqerleelrleqevarQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLS 607
Cdd:TIGR02169 358 EYAELKEELEDLRAEL---------------------EEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQ 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 608 GREQELEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLE 687
Cdd:TIGR02169 417 RLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAE 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 688 ARREQLEAEGQALLLAKETL----------TGELAGLRQQIIATQEKAS--------LDKELMAQKLVQAEREAQAS--- 746
Cdd:TIGR02169 497 AQARASEERVRGGRAVEEVLkasiqgvhgtVAQLGSVGERYATAIEVAAgnrlnnvvVEDDAVAKEAIELLKRRKAGrat 576
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 747 ---LREQRAAHEE--------------DLQRLQREKEAAWRELeaeraqLQSQLQREQEELLARLEAEKEELSEeiaalq 809
Cdd:TIGR02169 577 flpLNKMRDERRDlsilsedgvigfavDLVEFDPKYEPAFKYV------FGDTLVVEDIEAARRLMGKYRMVTL------ 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 810 qerdEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLATISLEMERQKRDAQSRQEQDRSTVNALTSELRDLraqree 889
Cdd:TIGR02169 645 ----EGELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDA------ 714
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 890 aaaahAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREVQRQEAGELRRSLG 969
Cdd:TIGR02169 715 -----SRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLS 789
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 970 EgaKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARtavgkeagelrtglqeversrlearrelQELR 1049
Cdd:TIGR02169 790 H--SRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEI----------------------------QELQ 839
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1050 RQMKMLDSENTRLGRELAELQGRLALGERAEKESRRETLGLRQRLLKGEASLEVMRQELQVAQRKLQEQEGEfRTRERRL 1129
Cdd:TIGR02169 840 EQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQ-IEKKRKR 918
|
810
....*....|....*..
gi 2217272553 1130 LGSLEEARGTEKQQLDH 1146
Cdd:TIGR02169 919 LSELKAKLEALEEELSE 935
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
755-1521 |
2.28e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 85.49 E-value: 2.28e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 755 EEDLQRLQREKEAA--WRELEAERAQLQSQLQREQeelLARLEAEKEELSEEIAALQQERDEgLLLAESEKQQALSLKES 832
Cdd:TIGR02168 199 ERQLKSLERQAEKAerYKELKAELRELELALLVLR---LEELREELEELQEELKEAEEELEE-LTAELQELEEKLEELRL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 833 EKTALSEK---LMGTRHSLATISLEMERQKRDAQSRQEQDRSTVNALTSELRDLRAQREEAAAAHAqevrRLQEQARDLG 909
Cdd:TIGR02168 275 EVSELEEEieeLQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELA----ELEEKLEELK 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 910 KQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREALRRSNEELRSAV 989
Cdd:TIGR02168 351 EELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKL 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 990 KKAESERISLKLANEDKEQKLALLEEARtavgkeageLRTGLQEVERSRLEARRELQELRRQMKMLDSENTRLGRELAEL 1069
Cdd:TIGR02168 431 EEAELKELQAELEELEEELEELQEELER---------LEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENL 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1070 QGrLALGERAEKESRRETLGLRQRLLKGEASLEVMRQELQVAQRK-LQEQEGEFRTRERRLLGSLEEARgtekqqLDHAR 1148
Cdd:TIGR02168 502 EG-FSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGrLQAVVVENLNAAKKAIAFLKQNE------LGRVT 574
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1149 GLELKLEAARAEAAELGLRLSAAEGrAQGLEAELARVEVQ-RRAAEAQLGGLRSA--LRRGLGLGRAPSPAPRPVP--GS 1223
Cdd:TIGR02168 575 FLPLDSIKGTEIQGNDREILKNIEG-FLGVAKDLVKFDPKlRKALSYLLGGVLVVddLDNALELAKKLRPGYRIVTldGD 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1224 PARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPAspdlDPEAVRGALREFLQELRSAQRERDELRTQTSALNRQLA 1303
Cdd:TIGR02168 654 LVRPGGVITGGSAKTNSSILERRREIEELEEKIEELEE----KIAELEKALAELRKELEELEEELEQLRKELEELSRQIS 729
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1304 EMEAERDSATSRARQLQKAVAESEEARRSVDGRLSGVQAELALQEESVRRSERERRATLDQVATLERSLQATESELRASQ 1383
Cdd:TIGR02168 730 ALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELR 809
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1384 EKISKMKANETKLEGDKRRLKEVLDASESRTVKLELQRRSLEGELQRSRLGLSDREAQAQALQDRVDSLQRQVADSEVKA 1463
Cdd:TIGR02168 810 AELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEAL 889
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*...
gi 2217272553 1464 GTLQLTVERLNGALAKVEESEGALRDKVRGLTEALAQSSASLNSTRDKNLHLQKALTA 1521
Cdd:TIGR02168 890 ALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSE 947
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
109-695 |
2.51e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 85.37 E-value: 2.51e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 109 LRLAESRAEAALEKQALLQAQLEEQLRDKVLREKDLAQQQMQSDLDKADLSARVTELGLAVKRLEKQNLEKDQVNKDLTE 188
Cdd:COG1196 258 LEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEE 337
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 189 KLEALESLRLQEQAALETedgegLQQTLRDLAQAVLSDSEsgvqlsgsertadasngslrglsgqrtpspprrsspgrgr 268
Cdd:COG1196 338 ELEELEEELEEAEEELEE-----AEAELAEAEEALLEAEA---------------------------------------- 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 269 sprrgpspacsdsSTLALIHSALHKRQLQVQDMRGRYEASQDLLGtLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHE 348
Cdd:COG1196 373 -------------ELAEAEEELEELAEELLEALRAAAELAAQLEE-LEEAEEALLERLERLEEELEELEEALAELEEEEE 438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 349 DAQREVQRLRSANELLSREKSNLAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSH 428
Cdd:COG1196 439 EEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAG 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 429 RQLEQLEGK--RSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSA 506
Cdd:COG1196 519 LRGLAGAVAvlIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIG 598
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 507 LNESLAQDKLDLNRLVAQLEEEksALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQqlp 586
Cdd:COG1196 599 AAVDLVASDLREADARYYVLGD--TLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAA--- 673
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 587 tLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLR 666
Cdd:COG1196 674 -LLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEA 752
|
570 580
....*....|....*....|....*....
gi 2217272553 667 LEKEALEGSLFEVQRQLAQLEARREQLEA 695
Cdd:COG1196 753 LEELPEPPDLEELERELERLEREIEALGP 781
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
676-1205 |
2.81e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 85.37 E-value: 2.81e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 676 LFEVQRQLAQLEARREQLE-----------AEGQALLLAKETLTGELAGLRQQIIATQEKAsldkelmaQKLVQAEREAQ 744
Cdd:COG1196 195 LGELERQLEPLERQAEKAEryrelkeelkeLEAELLLLKLRELEAELEELEAELEELEAEL--------EELEAELAELE 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 745 ASLREQRAAHEEDLQRLQrEKEAAWRELEAERAQLQSQLQREQEELLARLEAEKEELSEEIAALQQERDEGLLLAESEKQ 824
Cdd:COG1196 267 AELEELRLELEELELELE-EAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEE 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 825 QALSLKESEktalseklmgtrhslatislEMERQKRDAQSRQEQDRSTVNALTSELRDLRAQREEAAAAHAQEVRRLQEQ 904
Cdd:COG1196 346 LEEAEEELE--------------------EAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEEL 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 905 ARdlgkQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREALRRSNEE 984
Cdd:COG1196 406 EE----AEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAE 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 985 LRSAVKKAESERISLKLANEDKEQK----LALLEEARTAVGKEAGELRTGLQEVERSRLEARRELQELRRQMKMLDSENT 1060
Cdd:COG1196 482 LLEELAEAAARLLLLLEAEADYEGFlegvKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAA 561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1061 RLGRELAELQGRLAL--GERAEKESRRETLGLRQRLLKGEASLEVMRQELQVAQRKLQEQEGEFRTRERRLLGSLEEARG 1138
Cdd:COG1196 562 AIEYLKAAKAGRATFlpLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVT 641
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2217272553 1139 TEKQQLDHARGLELKLEAARAEAAELGLRLSAAEGRAQGLEAELARVEVQRRAAEAQLGGLRSALRR 1205
Cdd:COG1196 642 LAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERE 708
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1417-1699 |
3.00e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 84.99 E-value: 3.00e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1417 LELQRRSLEGELQRSRLGLSDREAQAQALQDRVDSLQRQVADSEVKAGTLQLTVERLNGALAKVEESEGALRDKVRGLTE 1496
Cdd:COG1196 216 RELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1497 ALAQSSASLNSTRDKNLHLQKALTACEHDRQVLQERLDAARQALSEARKQSSSLGEQVQTLRGEVADLELQRVEAEGQLQ 1576
Cdd:COG1196 296 ELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELA 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1577 QLREVLRQRQEGEAAALNTVQKLQDERRLLQERLGSLQRALAQLEAEKREVERSALRLEKDRVALRRTLDKVEREKLRSH 1656
Cdd:COG1196 376 EAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELE 455
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 2217272553 1657 EDTVRLSAEKGRLDRTLTGAELELAEAQRQIQQLEAQVVVLEQ 1699
Cdd:COG1196 456 EEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLE 498
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1268-1759 |
3.13e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 84.99 E-value: 3.13e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1268 EAVRGALREFLQELRSAQRERDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEEARRSVDGRLSGVQAELALQ 1347
Cdd:COG1196 249 EELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAEL 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1348 EESVRRSERERRATLDQVATLERSLQATESELRASQEKISKMKANETKLEGDKRRLKEVLDASESRTVKLELQRRSLEGE 1427
Cdd:COG1196 329 EEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEA 408
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1428 LQRSRLGLSDREAQAQALQDRVDSLQRQVADSEVKAGTLQLTVERLNGALAKVEESEGALRDKVRGLTEALAQSSASLNS 1507
Cdd:COG1196 409 EEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAE 488
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1508 TRDKNLHLQKALTACEH-DRQVLQERLDAARQALSEARKQSSSLGEQVQTLRGEVADLELQR--VEAEGQLQQLREVLRQ 1584
Cdd:COG1196 489 AAARLLLLLEAEADYEGfLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNivVEDDEVAAAAIEYLKA 568
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1585 RQEGEAAALNTVQKLQDERRLLQERLGSLQRALAQLEAEKREVERSALRLEKDRVALRRTLDKVEREKLRSHEDTVRLSA 1664
Cdd:COG1196 569 AKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLRE 648
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1665 EKGRLDRTLTGAELELAEAQRQIQQLEAQVVVLEQSHSPAQLEVDAQQQQLELQQEVERLRSAQAQTERTLEARERAHRQ 1744
Cdd:COG1196 649 VTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEE 728
|
490
....*....|....*
gi 2217272553 1745 RVSTLKGQLQQELRR 1759
Cdd:COG1196 729 QLEAEREELLEELLE 743
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
323-1015 |
2.02e-15 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 82.88 E-value: 2.02e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 323 ESERRALEEQLQRLRDKTDGAMQAHE----------DAQREVQRLRSANELLSREKSNLAHslqvAQQQAEELRQEREKL 392
Cdd:PTZ00121 1143 EEARKAEDAKRVEIARKAEDARKAEEarkaedakkaEAARKAEEVRKAEELRKAEDARKAE----AARKAEEERKAEEAR 1218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 393 QAAQEELRRQRDRLEEEQEDAvqDGARvRRELERSHRQLEQLEGKRSVLAKELVEVREAlSRATLQRDMLQAEKAEVAEA 472
Cdd:PTZ00121 1219 KAEDAKKAEAVKKAEEAKKDA--EEAK-KAEEERNNEEIRKFEEARMAHFARRQAAIKA-EEARKADELKKAEEKKKADE 1294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 473 LTKAEAGRVELELsmtKLRAEEASLQDSLSKLSalneslAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQER 552
Cdd:PTZ00121 1295 AKKAEEKKKADEA---KKKAEEAKKADEAKKKA------EEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEK 1365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 553 LEELRLEQEVARQGLEGSLRVAEQAQEALEQQlptlrhERSQLQEQLAQLSRQLSGREQELEQARREAQ--RQVEALERA 630
Cdd:PTZ00121 1366 AEAAEKKKEEAKKKADAAKKKAEEKKKADEAK------KKAEEDKKKADELKKAAAAKKKADEAKKKAEekKKADEAKKK 1439
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 631 AREKEAlAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEG-SLFEVQRQLAQLEARREQLEAEGQALLLAKETLTG 709
Cdd:PTZ00121 1440 AEEAKK-ADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAkKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKA 1518
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 710 ELAGLRQQIIATQEKASLDKELMAQKLVQAEREAQAslrEQRAAHEEDLQRLQREKEAAWRELEAERAQLQSQLQREQEE 789
Cdd:PTZ00121 1519 EEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKA---EELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIE 1595
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 790 LLARLEAEKeelseeiaalQQERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRhslatislEMERQKRDAQSRQEQD 869
Cdd:PTZ00121 1596 EVMKLYEEE----------KKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKK--------EAEEKKKAEELKKAEE 1657
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 870 RSTVNAltselrdlrAQREEAAAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQlrlledarDGLRRELLEAQRKLRE 949
Cdd:PTZ00121 1658 ENKIKA---------AEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKA--------EELKKKEAEEKKKAEE 1720
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2217272553 950 SQEGREVQRQEAGELRRSLGEGAKEREALRRSNEELRsavKKAESERISLKLANEDKEQKLALLEE 1015
Cdd:PTZ00121 1721 LKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKK---KIAHLKKEEEKKAEEIRKEKEAVIEE 1783
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1274-1759 |
2.26e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 82.29 E-value: 2.26e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1274 LREFLQELRSAQRERDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEEARRSVDGRLSGVQAELALQEESVRR 1353
Cdd:COG1196 227 AELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIAR 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1354 SERERRATLDQVATLERSLQATESELRASQEKISKMKANETKLEGDKRRLKEVLDASESRTVKLELQRRSLEGELQRSRL 1433
Cdd:COG1196 307 LEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAE 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1434 GLSDREAQAQALQDRVDSLQRQVADSEVKAGTLQLTVERLNGALAKVEESEGALRDKVRGLTEALAQSSASLNSTRDKNL 1513
Cdd:COG1196 387 ELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLA 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1514 HLQKALTACEHDRQVLQERLDAARQ---ALSEARKQSSSLGEQV-------------QTLRGEVADLELQRVEAEGQLQQ 1577
Cdd:COG1196 467 ELLEEAALLEAALAELLEELAEAAArllLLLEAEADYEGFLEGVkaalllaglrglaGAVAVLIGVEAAYEAALEAALAA 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1578 LREVLRQRQEGEAAALNTVQKLQDERRLLQERLGSLQRALAQLEAEKREVERSALRLEKDRVALRRTLDKVEREKLRSHE 1657
Cdd:COG1196 547 ALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRT 626
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1658 DTVRLSAEKGRLDRTLTGAELELAEAQRQIQQLEAQVVVLEQSHSPAQLEVDAQQQQLELQQEVERLRSAQAQTERTLEA 1737
Cdd:COG1196 627 LVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEE 706
|
490 500
....*....|....*....|..
gi 2217272553 1738 RERAHRQRVSTLKGQLQQELRR 1759
Cdd:COG1196 707 RELAEAEEERLEEELEEEALEE 728
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1268-1737 |
2.32e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 82.29 E-value: 2.32e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1268 EAVRGALREFLQELRSAQRERDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEEARRSVDGRLSGVQAELALQ 1347
Cdd:COG1196 298 ARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEA 377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1348 EESVRRSERERRATLDQVATLERSLQATESELRASQEKISKMKANETKLEGDKRRLKEVLDASESRTVKLELQRRSLEGE 1427
Cdd:COG1196 378 EEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEE 457
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1428 LQRSRLGLSDREAQAQALQDRVDSLQRQVADSEVKAGTLQLTVERLNGALAKVEES-----------EGALRDKVRGLTE 1496
Cdd:COG1196 458 EEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAAlllaglrglagAVAVLIGVEAAYE 537
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1497 ALAQSSASLNSTRDKNLHLQKALTACEHDRQVLQERLDAARQALSEARKQSSSLGEQVQTLRGEVADLELQRVEAEGQLQ 1576
Cdd:COG1196 538 AALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYV 617
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1577 QLREVLRQRQEGEAAALNTVQKLQDERRLLQERLGSLQRALAQLEAEKREVERSALRLEKDRVALRRTLDKVEREKLRSH 1656
Cdd:COG1196 618 LGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEE 697
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1657 EDTVRLSAEKGRLDRTLTGAELELAEAQRQIQQLEAQVVVLEQSHSPAQLEVDAQQQQLELQQEVERLRSAQAQTERTLE 1736
Cdd:COG1196 698 ALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIE 777
|
.
gi 2217272553 1737 A 1737
Cdd:COG1196 778 A 778
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
360-1044 |
3.37e-15 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 82.11 E-value: 3.37e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 360 ANELLSREKSNLAHSLQVAQQQAEELRQEREKLQAAQ-----EELRRQRD--RLEEE---QEDAVQDGARVRRELERSHR 429
Cdd:PTZ00121 1089 ADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEdarkaEEARKAEDarKAEEArkaEDAKRVEIARKAEDARKAEE 1168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 430 QLEQLEGKRSVLAKELVEVREAlsratlqRDMLQAEKAEVAEALTKAEAGRvelelsmtklRAEEASLQDSLSKLSALNE 509
Cdd:PTZ00121 1169 ARKAEDAKKAEAARKAEEVRKA-------EELRKAEDARKAEAARKAEEER----------KAEEARKAEDAKKAEAVKK 1231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 510 SLAQDKldlnrlvaQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEgsLRVAEQAQEALEQQLPTLR 589
Cdd:PTZ00121 1232 AEEAKK--------DAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADE--LKKAEEKKKADEAKKAEEK 1301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 590 HERSQLQEQlAQLSRQLSGREQELEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEK 669
Cdd:PTZ00121 1302 KKADEAKKK-AEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKA 1380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 670 EALEGSLFEVQRQLaqlEARREQLEAEGQALLLAKETLTGELAGLRQQIIATQEKASLDKElMAQKLVQAErEAQASLRE 749
Cdd:PTZ00121 1381 DAAKKKAEEKKKAD---EAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKK-KAEEAKKAD-EAKKKAEE 1455
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 750 QRAAHE-----EDLQRLQREKEAAWRELEAERAQLQSQLQREQEELLARLEAEKEELSEEIAALQQERDEGLLLAEsEKQ 824
Cdd:PTZ00121 1456 AKKAEEakkkaEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAE-EAK 1534
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 825 QALSLKESEKTALSEKLMGTRHslatISLEMERQKRDAQSRQEQDRSTVNALTSELRDLRAQREEAAAAHAQEVRRLQ-E 903
Cdd:PTZ00121 1535 KADEAKKAEEKKKADELKKAEE----LKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKaE 1610
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 904 QAR-----------------------DLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREVQRQE 960
Cdd:PTZ00121 1611 EAKkaeeakikaeelkkaeeekkkveQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKA 1690
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 961 AGELRRSLGEGAKEREALRRSNEELRSA--VKKAESER-ISLKLANEDKEQKLALLEEARTAVGkEAGELRTGLQEVERS 1037
Cdd:PTZ00121 1691 AEALKKEAEEAKKAEELKKKEAEEKKKAeeLKKAEEENkIKAEEAKKEAEEDKKKAEEAKKDEE-EKKKIAHLKKEEEKK 1769
|
....*..
gi 2217272553 1038 RLEARRE 1044
Cdd:PTZ00121 1770 AEEIRKE 1776
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
284-1018 |
5.27e-15 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 81.27 E-value: 5.27e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 284 LALIHSALHKRQLQVQDMRGRYEASQDLLGTLRKQLSDSESER--------RALEEQLQRLRDKTDGAMQAHEDAQREVQ 355
Cdd:TIGR02169 246 LASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEqlrvkekiGELEAEIASLERSIAEKERELEDAEERLA 325
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 356 RLRSANELLSREKSNLAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLE 435
Cdd:TIGR02169 326 KLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELK 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 436 GKRSVLAKELVEVREALsratlqrdmlqaekAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDK 515
Cdd:TIGR02169 406 RELDRLQEELQRLSEEL--------------ADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQEL 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 516 LDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSL----RVAEQAQEALEQQLPTLRHE 591
Cdd:TIGR02169 472 YDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVaqlgSVGERYATAIEVAAGNRLNN 551
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 592 RSQLQEQLAQLSRQLSGReqelEQARREAQRQVEALERAAREKEALAKEHA-GLAVQLVAAERE---------GRTLS-- 659
Cdd:TIGR02169 552 VVVEDDAVAKEAIELLKR----RKAGRATFLPLNKMRDERRDLSILSEDGViGFAVDLVEFDPKyepafkyvfGDTLVve 627
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 660 --EEATRL--RLEKEALEGSLFEVQ-------RQLAQLEARREQLEAEGQALLLAKETLTGELAGLRqqiiatQEKASLD 728
Cdd:TIGR02169 628 diEAARRLmgKYRMVTLEGELFEKSgamtggsRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQ------SELRRIE 701
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 729 KELMAqkLVQAEREAQASLREQraahEEDLQRLQREKEAAWRELEAERAQLQSqLQREQEELLARLEAEKEELSEEIAAL 808
Cdd:TIGR02169 702 NRLDE--LSQELSDASRKIGEI----EKEIEQLEQEEEKLKERLEELEEDLSS-LEQEIENVKSELKELEARIEELEEDL 774
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 809 QQERDEgllLAESEKQQALSlKESEKTALSEKLMGTRHSLATISLEMERQKRDAQSRQEQDRSTVNALTSELRDLRAQRE 888
Cdd:TIGR02169 775 HKLEEA---LNDLEARLSHS-RIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIK 850
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 889 EaaaahaqevrrLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREVQRQEAGELRRSL 968
Cdd:TIGR02169 851 S-----------IEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRL 919
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|
gi 2217272553 969 GEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEART 1018
Cdd:TIGR02169 920 SELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRA 969
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
288-640 |
2.60e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 78.95 E-value: 2.60e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 288 HSALHKRQlQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSRE 367
Cdd:TIGR02168 670 SSILERRR-EIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEER 748
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 368 KSNLAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVE 447
Cdd:TIGR02168 749 IAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLES 828
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 448 VREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEE 527
Cdd:TIGR02168 829 LERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELES 908
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 528 EKSAL-QGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLS--- 603
Cdd:TIGR02168 909 KRSELrRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELGpvn 988
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2217272553 604 -------RQLSGREQELEQARREAQRQVEALERAAREKEALAKE 640
Cdd:TIGR02168 989 laaieeyEELKERYDFLTAQKEDLTEAKETLEEAIEEIDREARE 1032
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
315-790 |
2.71e-13 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 75.46 E-value: 2.71e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 315 LRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSlqvaQQQAEELRQEREKLQA 394
Cdd:PRK02224 204 LHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEIEDL----RETIAETEREREELAE 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 395 AQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRATLQ---------------- 458
Cdd:PRK02224 280 EVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEaeslredaddleerae 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 459 -----RDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQ 533
Cdd:PRK02224 360 elreeAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTAR 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 534 GRQRQAEQeatvareeqerlEELRLEQEVARQGLEGSLRV-----AEQAQEALEQQLPTLRHERSQLQEQLAQLSrQLSG 608
Cdd:PRK02224 440 ERVEEAEA------------LLEAGKCPECGQPVEGSPHVetieeDRERVEELEAELEDLEEEVEEVEERLERAE-DLVE 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 609 REQELEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEA 688
Cdd:PRK02224 507 AEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKE 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 689 RREQLEAEgQALLLAKETLTGELAGLRQQIIATQEKASLDKELMAQKlvqAEREAQASLREQRAAHEEDLQRLQREKEA- 767
Cdd:PRK02224 587 RIESLERI-RTLLAAIADAEDEIERLREKREALAELNDERRERLAEK---RERKRELEAEFDEARIEEAREDKERAEEYl 662
|
490 500
....*....|....*....|....*...
gi 2217272553 768 -----AWRELEAERAQLQSQLQREQEEL 790
Cdd:PRK02224 663 eqveeKLDELREERDDLQAEIGAVENEL 690
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
557-1328 |
3.98e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 75.09 E-value: 3.98e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 557 RLEQEVARQGLEGSLRVAEQAQEaLEQQLPTLRHERS-----QLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAA 631
Cdd:TIGR02168 195 LNELERQLKSLERQAEKAERYKE-LKAELRELELALLvlrleELREELEELQEELKEAEEELEELTAELQELEEKLEELR 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 632 REKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQALLLAKETLTGEL 711
Cdd:TIGR02168 274 LEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEEL 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 712 AGLRQQIIATQEK--ASLDKELMAQKLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEaeraqlqsQLQREQEE 789
Cdd:TIGR02168 354 ESLEAELEELEAEleELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRE--------RLQQEIEE 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 790 LLARLEAEKEELSEEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLATISLEMERQKRDaQSRQEQD 869
Cdd:TIGR02168 426 LLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERL-QENLEGF 504
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 870 RSTVNALTSELRDLRAQREEAAAAHAQEVRRLQEQARDLGKQRDS-CLREAEELRTQLRLLEDARDGLRRELLEAQRKLR 948
Cdd:TIGR02168 505 SEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGRLQAvVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGT 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 949 ESQEGREVQRQEAGELRRSLGEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARTAVGKeaGELR 1028
Cdd:TIGR02168 585 EIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKLRPGYRIVTLDGDLVRPG--GVIT 662
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1029 TGLQEVERSRLEARRELQELRRQMKMLDSENTRLGRELAELQGRLALGERAEKESRRETLGLRQRLLKGEASLEVMRQEL 1108
Cdd:TIGR02168 663 GGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEV 742
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1109 QVAQRKLQEQEGE---FRTRERRLLGSLEEARGTEKQQLDHARGLELKLEAARAEAAELGLRLSAAEGRAQGLEAELARV 1185
Cdd:TIGR02168 743 EQLEERIAQLSKElteLEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANL 822
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1186 EVQRRAAEAQLGGLRSALRRglglgrapspaprpvpgSPARDAPAEGSGEGLN-SPSTLECSPGSQPPSPGPAT-SPASP 1263
Cdd:TIGR02168 823 RERLESLERRIAATERRLED-----------------LEEQIEELSEDIESLAaEIEELEELIEELESELEALLnERASL 885
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217272553 1264 DLDPEAVRGALREFLQELRSAQRERDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEE 1328
Cdd:TIGR02168 886 EEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYS 950
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
747-1631 |
4.43e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 74.72 E-value: 4.43e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 747 LREQRAaHEEDLQRLQREKE--------AAWRELEAERAQLQSQLQREQEELlARLEAEKEELSEEIAALQQERDEglll 818
Cdd:TIGR02169 203 LRRERE-KAERYQALLKEKReyegyellKEKEALERQKEAIERQLASLEEEL-EKLTEEISELEKRLEEIEQLLEE---- 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 819 aESEKQQALSLKESektalseklmgtrhslatisLEMERQKRDAQSRQEQDRSTVNALTSELRDLRAQREEAAAAHAQEV 898
Cdd:TIGR02169 277 -LNKKIKDLGEEEQ--------------------LRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLL 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 899 RRLQEQARDLGKQRdsclREAEELRTQLRLLEDARDGLRRELLEAQRKLRESqegrevqRQEAGELRRSLGEGAKEREAL 978
Cdd:TIGR02169 336 AEIEELEREIEEER----KRRDKLTEEYAELKEELEDLRAELEEVDKEFAET-------RDELKDYREKLEKLKREINEL 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 979 RRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARTAVGKEAGELRTGLQEVERSRLEARRELQELRRQMKMLDSE 1058
Cdd:TIGR02169 405 KRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKE 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1059 NTRLGRELAELQGRLALGERAEKESRRETLGLRQRLlkgEASLEVMRQELQVaqrklqeqegefrtrERRLLGSLEEARG 1138
Cdd:TIGR02169 485 LSKLQRELAEAEAQARASEERVRGGRAVEEVLKASI---QGVHGTVAQLGSV---------------GERYATAIEVAAG 546
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1139 TEKQ------QLDHARGLELKLEAARAEAAELGLRLSAAEGRAQGLEAE-------LARVEVQRRAAEAQLGGLRSAL-- 1203
Cdd:TIGR02169 547 NRLNnvvvedDAVAKEAIELLKRRKAGRATFLPLNKMRDERRDLSILSEdgvigfaVDLVEFDPKYEPAFKYVFGDTLvv 626
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1204 ------RRGLGLGRAPSPAPRPVPGSPARDAPA-EGSGEGLNSPSTLECSPGSQPpspgpatspaspdlDPEAVRGALRE 1276
Cdd:TIGR02169 627 edieaaRRLMGKYRMVTLEGELFEKSGAMTGGSrAPRGGILFSRSEPAELQRLRE--------------RLEGLKRELSS 692
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1277 FLQELRSAQRERDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEEARRSVDGRLSGVQAELALQEESVRRSER 1356
Cdd:TIGR02169 693 LQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEE 772
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1357 ERRATLDQVATLERSLqateselraSQEKISKMKANETKLEGDKRRLKEVLDASESRTVKLELQRRSLEGELQRSRLGLS 1436
Cdd:TIGR02169 773 DLHKLEEALNDLEARL---------SHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRI 843
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1437 DREAQAQALQDRVDSLQRQVADSEVKAGTLQLTVERLNGALAKVEESEGALRDKVRGLTEALAQSSASLNSTRDKNLHLQ 1516
Cdd:TIGR02169 844 DLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELK 923
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1517 KALtacehdrQVLQERLDaarqALSEARKQSSSLGEQVQTLRgevaDLELQRVEAEGQLQQLREVLRQRQEGEAAALNTV 1596
Cdd:TIGR02169 924 AKL-------EALEEELS----EIEDPKGEDEEIPEEELSLE----DVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRL 988
|
890 900 910
....*....|....*....|....*....|....*
gi 2217272553 1597 QKLQDERRLLQERLGSLQRALAQLEAEKREVERSA 1631
Cdd:TIGR02169 989 DELKEKRAKLEEERKAILERIEEYEKKKREVFMEA 1023
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
321-872 |
5.22e-13 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 74.79 E-value: 5.22e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 321 DSESERRALEEQLQRLRDKTDGAMQAH---EDAQREVQRLRSANELLSREKSNLAHSLQVAQQ--QAEELRQEREKLQAA 395
Cdd:PTZ00121 1238 DAEEAKKAEEERNNEEIRKFEEARMAHfarRQAAIKAEEARKADELKKAEEKKKADEAKKAEEkkKADEAKKKAEEAKKA 1317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 396 Q------EELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVR----EALSRATLQRDMLQAE 465
Cdd:PTZ00121 1318 DeakkkaEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKkkadAAKKKAEEKKKADEAK 1397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 466 K-----AEVAEALTKAEAGRVELElsMTKLRAEEASLQDSLSKlsalnesLAQDKLDLNRLVAQLEEEKSALQGRQRQAE 540
Cdd:PTZ00121 1398 KkaeedKKKADELKKAAAAKKKAD--EAKKKAEEKKKADEAKK-------KAEEAKKADEAKKKAEEAKKAEEAKKKAEE 1468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 541 QEATvarEEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQElEQARREA 620
Cdd:PTZ00121 1469 AKKA---DEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKAD-EAKKAEE 1544
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 621 QRQVEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQAL 700
Cdd:PTZ00121 1545 KKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEE 1624
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 701 LLAKETLTGELAGLRQQIIATQEKASLDKELMAQKLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEAERAQLQ 780
Cdd:PTZ00121 1625 LKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKA 1704
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 781 SQLQREQEELLARLEAEKEELSEEIAALQQERDEglllAESEKQQALSLK--ESEKTALSEKLMGTRHSLATISLEMER- 857
Cdd:PTZ00121 1705 EELKKKEAEEKKKAEELKKAEEENKIKAEEAKKE----AEEDKKKAEEAKkdEEEKKKIAHLKKEEEKKAEEIRKEKEAv 1780
|
570 580
....*....|....*....|
gi 2217272553 858 -----QKRDAQSRQEQDRST 872
Cdd:PTZ00121 1781 ieeelDEEDEKRRMEVDKKI 1800
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
763-1628 |
6.76e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 74.33 E-value: 6.76e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 763 REKEAAWRELEaeraqlqsqlqrEQEELLARLEAEKEELSEEIAALQQERDEglllaeSEKQQALS--LKESEKTALSEK 840
Cdd:TIGR02169 170 RKKEKALEELE------------EVEENIERLDLIIDEKRQQLERLRREREK------AERYQALLkeKREYEGYELLKE 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 841 LMGTRHSLATISLEMERQKRDAQSRQEQDRSTVNALTSELRDLRAQREEAAAAHAQEVRRLQEqardlgkqrdsclrEAE 920
Cdd:TIGR02169 232 KEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKE--------------KIG 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 921 ELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREALrrsneelrsavkkaeSERIslk 1000
Cdd:TIGR02169 298 ELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKL---------------TEEY--- 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1001 lanEDKEQKLALLEEARTAVGKEAGELRTGLQEVERSRLEARRELQELRRQMKMLDSENTRLGRELAELQGRLALGERAE 1080
Cdd:TIGR02169 360 ---AELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKI 436
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1081 KESRRETLGLRQRLLKGEASLEVMRQELQVAQRKLQEQEGEFRTRERRLLGSLEEARGTEKQQldhargleLKLEAARAE 1160
Cdd:TIGR02169 437 NELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQA--------RASEERVRG 508
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1161 AAELGLRLSAAEGRAQGLEAELARVEVQRRAA-EAQLGG-LRSALRRGLGLGRAPSPAPRPVPGSPARDAPaegsgegLN 1238
Cdd:TIGR02169 509 GRAVEEVLKASIQGVHGTVAQLGSVGERYATAiEVAAGNrLNNVVVEDDAVAKEAIELLKRRKAGRATFLP-------LN 581
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1239 SPSTLECSPGSQPPSPGPATSPASPDLDPE---AVRGALREFL--QELRSAQRERDELRTQTsaLNRQLAEMEAERDSAT 1313
Cdd:TIGR02169 582 KMRDERRDLSILSEDGVIGFAVDLVEFDPKyepAFKYVFGDTLvvEDIEAARRLMGKYRMVT--LEGELFEKSGAMTGGS 659
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1314 SRARQLQKAVAESEEARRSVDGRLSGVQAELAlqeesvrrsererrATLDQVATLERSLQATESELRASQEKISKMKANE 1393
Cdd:TIGR02169 660 RAPRGGILFSRSEPAELQRLRERLEGLKRELS--------------SLQSELRRIENRLDELSQELSDASRKIGEIEKEI 725
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1394 TKLEGDKRRLKEVLDASESRTVKLELQRRSLEGELQRSRLGLSDREAQAQALQDRVDSLQRQVADSEVKagtlqltverl 1473
Cdd:TIGR02169 726 EQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIP----------- 794
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1474 ngalaKVEESEGALRDKVRGLTEALAQSSASLNSTRDKNLHLQKALTACEHDRQVLQERLDAARQALSEARKQSSSLGEQ 1553
Cdd:TIGR02169 795 -----EIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEE 869
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217272553 1554 VQTLRGEVADLELQRVEAEGQLQQLREVLRQRQEGEAAALNTVQKLQDERRLLQERLGSLQRALAQLEAEKREVE 1628
Cdd:TIGR02169 870 LEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDE 944
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
293-775 |
3.84e-12 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 71.87 E-value: 3.84e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 293 KRQLQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGAMQAH--------EDAQREVQRLRSANELL 364
Cdd:COG4913 278 RAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIrgnggdrlEQLEREIERLERELEER 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 365 SREKSNLAHSLQVAQQQ----AEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSV 440
Cdd:COG4913 358 ERRRARLEALLAALGLPlpasAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSN 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 441 LAKELVEVREALSRAtlqrdmLQAEKAE---VAEALTKAEAGR-----VELELSMTKLR--AEEASLQDSLS-------- 502
Cdd:COG4913 438 IPARLLALRDALAEA------LGLDEAElpfVGELIEVRPEEErwrgaIERVLGGFALTllVPPEHYAAALRwvnrlhlr 511
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 503 ------KLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGL--EGSLRVA 574
Cdd:COG4913 512 grlvyeRVRTGLPDPERPRLDPDSLAGKLDFKPHPFRAWLEAELGRRFDYVCVDSPEELRRHPRAITRAGQvkGNGTRHE 591
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 575 EQAQEAL----------EQQLPTLRHERSQLQEQLAQLSRQLSGREQELE--QARREAQRQVEALERAAREKEALAKEHA 642
Cdd:COG4913 592 KDDRRRIrsryvlgfdnRAKLAALEAELAELEEELAEAEERLEALEAELDalQERREALQRLAEYSWDEIDVASAEREIA 671
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 643 GLAVQLVAAER---EGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQALLLAKETLtGELAGLRQQII 719
Cdd:COG4913 672 ELEAELERLDAssdDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAA-EDLARLELRAL 750
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 2217272553 720 ATQEKASLDKELMAQKLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEAE 775
Cdd:COG4913 751 LEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRAFNREWPAETAD 806
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1341-1764 |
1.68e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 69.58 E-value: 1.68e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1341 QAELALQEESVRRSERErratldqvatleRSLQATESELRASQEKISKMKANETKLEGDKRRLKEVLDASESRTVKLELQ 1420
Cdd:COG1196 208 QAEKAERYRELKEELKE------------LEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLE 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1421 RRSLEGELQRSRLGLSDREAQAQALQDRVDSLQRQVADSEVKAGTLQLTVERLNGALAKVEESEGALRDKVRGLTEALAQ 1500
Cdd:COG1196 276 LEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEE 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1501 SSASLNSTRDKNLHLQKALTACEHDRQVLQERLDAARQALSEARKQSSSLGEQVQTLRGEVADLELQRVEAEGQLQQLRE 1580
Cdd:COG1196 356 AEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEE 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1581 VLRQRQEGEAAALNTVQKLQDERRLLQERLGSLQRALAQLEAekrevERSALRLEKDRVALRRTLDKVEREKLRSHEDTV 1660
Cdd:COG1196 436 EEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEA-----ALAELLEELAEAAARLLLLLEAEADYEGFLEGV 510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1661 RLSAEKGRLDRTLTGAELELAEAQRQIQQLEAQVVVLEQSHSPAQLEVDAQQQQLELQQEVERLRSAQAQTERTLEARER 1740
Cdd:COG1196 511 KAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAA 590
|
410 420
....*....|....*....|....
gi 2217272553 1741 AHRQRVSTLKGQLQQELRRSSAPF 1764
Cdd:COG1196 591 ALARGAIGAAVDLVASDLREADAR 614
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
109-785 |
3.02e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 68.93 E-value: 3.02e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 109 LRLAESRAEAALEKQALLQAQLEEQLRDKVLREKDLAQQQMQsdldKADLSARVTELGLAVKRLEKQNLEKDQVNKDLTE 188
Cdd:TIGR02168 304 KQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEK----LEELKEELESLEAELEELEAELEELESRLEELEE 379
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 189 KLEALESLRLQEQAALETEDGEglQQTLRDLaqavLSDSESGVQLSGSERTADASNgslrglsgqrtpspprrsspgrgr 268
Cdd:TIGR02168 380 QLETLRSKVAQLELQIASLNNE--IERLEAR----LERLEDRRERLQQEIEELLKK------------------------ 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 269 sprrgpspacSDSSTLALIHSALHKRQLQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGA---MQ 345
Cdd:TIGR02168 430 ----------LEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLerlQE 499
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 346 AHEDAQREVQRLRSANELLSREKSNLAHSLQVAQQqaeelrQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVR---- 421
Cdd:TIGR02168 500 NLEGFSEGVKALLKNQSGLSGILGVLSELISVDEG------YEAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNElgrv 573
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 422 ----------RELERSHRQLEQLEGKRSVLAKELVEVREALSRA-------------------------------TLQRD 460
Cdd:TIGR02168 574 tflpldsikgTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKAlsyllggvlvvddldnalelakklrpgyrivTLDGD 653
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 461 MLQAEKAeVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAE 540
Cdd:TIGR02168 654 LVRPGGV-ITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALR 732
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 541 QEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREA 620
Cdd:TIGR02168 733 KDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAEL 812
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 621 QRQVEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQAL 700
Cdd:TIGR02168 813 TLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALL 892
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 701 LLAKETLTGELAGLRQQIIATQEKASLDKELMA------QKLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEA 774
Cdd:TIGR02168 893 RSELEELSEELRELESKRSELRRELEELREKLAqlelrlEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARR 972
|
730
....*....|.
gi 2217272553 775 ERAQLQSQLQR 785
Cdd:TIGR02168 973 RLKRLENKIKE 983
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1284-1746 |
6.42e-11 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 67.63 E-value: 6.42e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1284 AQRERDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEEARRSVDG-RLSGVQAELALQEESVRRSERERRATL 1362
Cdd:COG4913 286 AQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGdRLEQLEREIERLERELEERERRRARLE 365
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1363 DQVATLERSLQATESELRASQEKIskmKANETKLEGDKRRLKEVLDASESRTVKLELQRRSLEGELQRSRLGLSD----- 1437
Cdd:COG4913 366 ALLAALGLPLPASAEEFAALRAEA---AALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNiparl 442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1438 ---REAQAQALQDRVDSLQ-----RQVADSEVK------------AGTLQLTVERLNGALAKVEESEGALR---DKVRGL 1494
Cdd:COG4913 443 lalRDALAEALGLDEAELPfvgelIEVRPEEERwrgaiervlggfALTLLVPPEHYAAALRWVNRLHLRGRlvyERVRTG 522
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1495 TEALAQSSASLNSTRDKnlhlqkaLTACEHD-----RQVLQERLDAA-----------RQALSEA--RKQSSSLGE---- 1552
Cdd:COG4913 523 LPDPERPRLDPDSLAGK-------LDFKPHPfrawlEAELGRRFDYVcvdspeelrrhPRAITRAgqVKGNGTRHEkddr 595
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1553 ---------------QVQTLRGEVADLELQRVEAEGQLQQLREVLRQRQEgEAAALNTVQKLQDErrllQERLGSLQRAL 1617
Cdd:COG4913 596 rrirsryvlgfdnraKLAALEAELAELEEELAEAEERLEALEAELDALQE-RREALQRLAEYSWD----EIDVASAEREI 670
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1618 AQLEAEKREVERSALRLEkdrvALRRTLDKVEREKLRSHEDTVRLSAEKGRLDRTLTGAELELAEAQRQIQQLEAQVVVl 1697
Cdd:COG4913 671 AELEAELERLDASSDDLA----ALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARL- 745
|
490 500 510 520
....*....|....*....|....*....|....*....|....*....
gi 2217272553 1698 eqshsPAQLEVDAQQQQLELQQEVERLRSAQAQTERTLEARERAHRQRV 1746
Cdd:COG4913 746 -----ELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEEL 789
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
327-694 |
1.67e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 66.24 E-value: 1.67e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 327 RALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRL 406
Cdd:TIGR02169 670 RSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSL 749
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 407 EEEQEDAVQDGARVRRELERSHRQLEQLEgkrsvlakelvevreaLSRATLQRDMLQAEKAEVAEALTKAEAGRVELELS 486
Cdd:TIGR02169 750 EQEIENVKSELKELEARIEELEEDLHKLE----------------EALNDLEARLSHSRIPEIQAELSKLEEEVSRIEAR 813
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 487 MTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQG 566
Cdd:TIGR02169 814 LREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDE 893
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 567 LEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSgreqELEQARREAQRQVEALERAAREKEalakehaglav 646
Cdd:TIGR02169 894 LEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELS----EIEDPKGEDEEIPEEELSLEDVQA----------- 958
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 2217272553 647 QLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLE 694
Cdd:TIGR02169 959 ELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAIL 1006
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
297-790 |
3.20e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 65.32 E-value: 3.20e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 297 QVQDMRGRYEASQDLLGTLRKQLsdsESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQ 376
Cdd:COG4913 229 ALVEHFDDLERAHEALEDAREQI---ELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEELRAELA 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 377 VAQQQAEELRQEREKLQAAQEELRRQR--------DRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEV 448
Cdd:COG4913 306 RLEAELERLEARLDALREELDELEAQIrgnggdrlEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAAL 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 449 REALSRAtlqRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQ--------DSLSKLSALNESLAQDKLDLnR 520
Cdd:COG4913 386 RAEAAAL---LEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLErrksnipaRLLALRDALAEALGLDEAEL-P 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 521 LVAQL----EEEKS-------ALQGRQR----QAEQEATVAR-------------EEQERLEELRLEQEVARQGLEGSLR 572
Cdd:COG4913 462 FVGELievrPEEERwrgaierVLGGFALtllvPPEHYAAALRwvnrlhlrgrlvyERVRTGLPDPERPRLDPDSLAGKLD 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 573 VAE-QAQEALEQQL------------PTLRHERSQL-------------------------------QEQLAQLSRQLsg 608
Cdd:COG4913 542 FKPhPFRAWLEAELgrrfdyvcvdspEELRRHPRAItragqvkgngtrhekddrrrirsryvlgfdnRAKLAALEAEL-- 619
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 609 reQELEQARREAQRQVEALERAAREKEALAKEHAGLAvQLVAAEREGRTLSEEATRLRLEKEALEGSlfevQRQLAQLEA 688
Cdd:COG4913 620 --AELEEELAEAEERLEALEAELDALQERREALQRLA-EYSWDEIDVASAEREIAELEAELERLDAS----SDDLAALEE 692
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 689 RREQLEAEGQALLLAKETLTGELAGLRQQIIATQEKASLDKELMAQKLVQAEREAQASLREQRAAHEEDLQRlqrekEAA 768
Cdd:COG4913 693 QLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVE-----REL 767
|
570 580
....*....|....*....|..
gi 2217272553 769 WRELEAERAQLQSQLQREQEEL 790
Cdd:COG4913 768 RENLEERIDALRARLNRAEEEL 789
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1365-1700 |
3.99e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 65.09 E-value: 3.99e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1365 VATLERSLQATESELRASQEKISKmkaNETKLEGDKRRLKEVLDASESRTVKLELQRRSLEGELQRSRLGLSDREAQAQA 1444
Cdd:TIGR02169 165 VAEFDRKKEKALEELEEVEENIER---LDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEA 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1445 LQDRVDSLQRQVADSEVKAGTLQLTVERLNGALAKV--------EESEGALRDKVRGLTEALAQSSASLNSTRDKNLHLQ 1516
Cdd:TIGR02169 242 IERQLASLEEELEKLTEEISELEKRLEEIEQLLEELnkkikdlgEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1517 KALTACEHDRQVLQERLDAARQALSEARKQSSSLGEQVQTLRGEVADLELQRVEAEGQLQQLREVLRQRQEGEAAALNTV 1596
Cdd:TIGR02169 322 ERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREI 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1597 QKLQDERRLLQERLGSLQRALAQLEAEKREVERSALRLEKDRVALRRTLDKVEREKLRSHEDTVRLSAEKGRLDRTLTGA 1676
Cdd:TIGR02169 402 NELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRV 481
|
330 340
....*....|....*....|....
gi 2217272553 1677 ELELAEAQRQIQQLEAQVVVLEQS 1700
Cdd:TIGR02169 482 EKELSKLQRELAEAEAQARASEER 505
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
594-1130 |
7.71e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 64.17 E-value: 7.71e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 594 QLQEQLAQLSRqlsgreqeLEQARREAQRQVEALERAAREKEALAKEHAGLAVQlvAAEREGRTLSEEATRLRLEKEALE 673
Cdd:COG4913 229 ALVEHFDDLER--------AHEALEDAREQIELLEPIRELAERYAAARERLAEL--EYLRAALRLWFAQRRLELLEAELE 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 674 gslfEVQRQLAQLEARREQLEAEgqalllaKETLTGELAGLRQQI--IATQEKASLDKELMAQKLVQAEREAQ------- 744
Cdd:COG4913 299 ----ELRAELARLEAELERLEAR-------LDALREELDELEAQIrgNGGDRLEQLEREIERLERELEERERRrarleal 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 745 -ASLREQRAAHEEDLQRLQREKEAAWRELEAERAQLQsQLQREQEELLARLEAEKEELSEEIAALQQER---DEGLLLAE 820
Cdd:COG4913 368 lAALGLPLPASAEEFAALRAEAAALLEALEEELEALE-EALAEAEAALRDLRRELRELEAEIASLERRKsniPARLLALR 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 821 SEKQQALSLKESEKTALSEkLM--------------GTRHSLATISLEMERQKRDAQS--RQEQDRSTVNalTSELRDLR 884
Cdd:COG4913 447 DALAEALGLDEAELPFVGE-LIevrpeeerwrgaieRVLGGFALTLLVPPEHYAAALRwvNRLHLRGRLV--YERVRTGL 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 885 AQREEAAAAHAQEVRRLQEQA--------RDLGKQRD-SCLREAEELRTQLRLL--------------EDARDGLRRELL 941
Cdd:COG4913 524 PDPERPRLDPDSLAGKLDFKPhpfrawleAELGRRFDyVCVDSPEELRRHPRAItragqvkgngtrheKDDRRRIRSRYV 603
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 942 ---EAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREALRRSNEELRSAVKKAESERISLKLANE--DKEQKLALLEEA 1016
Cdd:COG4913 604 lgfDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREiaELEAELERLDAS 683
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1017 RTAVgkeaGELRTGLQEVERSRLEARRELQELRRQMKMLDSENTRLGRELAELQGRLALGERAEKESRRETLGLRQRLLK 1096
Cdd:COG4913 684 SDDL----AALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAAL 759
|
570 580 590
....*....|....*....|....*....|....
gi 2217272553 1097 GEASLEVMRQELQVAQRKLQEQEGEFRTRERRLL 1130
Cdd:COG4913 760 GDAVERELRENLEERIDALRARLNRAEEELERAM 793
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
2-686 |
1.00e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 63.92 E-value: 1.00e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 2 LREQLDQAGSANQALSEDIRKVTNDWTRCRKELEHREAAWRREEESFNAYfSNEHSRL-LLLWRQVVGFRRLVSEVKMFT 80
Cdd:TIGR02168 244 LQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYAL-ANEISRLeQQKQILRERLANLERQLEELE 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 81 ------ERDLLQLGGELARTSRAVQEAgLGLSTGLRLAESRAEAALEKQALLQAQLEEQLRDKVLREKDLAQQQmqsdld 154
Cdd:TIGR02168 323 aqleelESKLDELAEELAELEEKLEEL-KEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQI------ 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 155 kADLSARVTELGLAVKRLEKQNLEKDQVNKDLTEKLEALESLRLQEQAALETEDGEGLQQTLRDLAQAVLSDSESGVQLS 234
Cdd:TIGR02168 396 -ASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAE 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 235 GSERTADASNGSLRGLSGQRTPSPPRRSSPGRG-------RSPRRGPSPACSD--------------------------- 280
Cdd:TIGR02168 475 QALDAAERELAQLQARLDSLERLQENLEGFSEGvkallknQSGLSGILGVLSElisvdegyeaaieaalggrlqavvven 554
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 281 -SSTLALIHSALHKRQLQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEqLQRLRDKTDGAMQAHEDAQREVQRLRS 359
Cdd:TIGR02168 555 lNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKD-LVKFDPKLRKALSYLLGGVLVVDDLDN 633
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 360 ANELLSREK----------------------SNLAHSLQVAQQQA-EELRQEREKLQAAQEELRRQRDRLEEEQEDAVQD 416
Cdd:TIGR02168 634 ALELAKKLRpgyrivtldgdlvrpggvitggSAKTNSSILERRREiEELEEKIEELEEKIAELEKALAELRKELEELEEE 713
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 417 GARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEAS 496
Cdd:TIGR02168 714 LEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQ 793
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 497 LQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQ 576
Cdd:TIGR02168 794 LKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELES 873
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 577 AQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEALAKEHAGLAVQL-VAAEREG 655
Cdd:TIGR02168 874 ELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLsEEYSLTL 953
|
730 740 750
....*....|....*....|....*....|.
gi 2217272553 656 RTLSEEATRLRLEKEALEGSLFEVQRQLAQL 686
Cdd:TIGR02168 954 EEAEALENKIEDDEEEARRRLKRLENKIKEL 984
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1318-1630 |
4.04e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 62.01 E-value: 4.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1318 QLQKAVAESEEARRSVDGRLSGVQAELALQEESVRRSERERRATLDQVATLERSLQATESELrasQEKISKMKANETKLE 1397
Cdd:TIGR02169 199 QLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEI---SELEKRLEEIEQLLE 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1398 GDKRRLKEvLDASESRTVK-----LELQRRSLEGELQRSRLGLSDREAQAQALQDRVDSLQRQVADSEVKAGTLQLTVER 1472
Cdd:TIGR02169 276 ELNKKIKD-LGEEEQLRVKekigeLEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDK 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1473 LNGALAKVEESEGALRDKVRGLTEALAQSSASLNSTRDKNLHLQKALTACEHDRQVLQERLDAARQALSEARKQSSSLGE 1552
Cdd:TIGR02169 355 LTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEA 434
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217272553 1553 QVQTLRGEVADLELQRVEAEGQLQQLREVLRQRQEgeaaalnTVQKLQDERRLLQERLGSLQRALAQLEAEKREVERS 1630
Cdd:TIGR02169 435 KINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQ-------ELYDLKEEYDRVEKELSKLQRELAEAEAQARASEER 505
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
323-952 |
4.74e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 61.70 E-value: 4.74e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 323 ESERRALEEQLQRLRDKTDGAMQAheDAQREVQRLRSANELLSREKSNLAHSLQvaqqQAEELRQEREKLQAAQEELRRQ 402
Cdd:PTZ00121 1179 EAARKAEEVRKAEELRKAEDARKA--EAARKAEEERKAEEARKAEDAKKAEAVK----KAEEAKKDAEEAKKAEEERNNE 1252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 403 RDRLEEEQEDA--VQDGARVRRELERSHRQLEQLEGKRSvlAKELVEVREALSRATLQRDMLQAEKAEVA-----EALTK 475
Cdd:PTZ00121 1253 EIRKFEEARMAhfARRQAAIKAEEARKADELKKAEEKKK--ADEAKKAEEKKKADEAKKKAEEAKKADEAkkkaeEAKKK 1330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 476 AEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLdlnrlvaQLEEEKSALQGRQRQAEQ-----EATVAREEQ 550
Cdd:PTZ00121 1331 ADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEK-------KKEEAKKKADAAKKKAEEkkkadEAKKKAEED 1403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 551 ERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALE-R 629
Cdd:PTZ00121 1404 KKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEaK 1483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 630 AAREKEALAKEHAGLAVQLVAAErEGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEgqalllaketltg 709
Cdd:PTZ00121 1484 KADEAKKKAEEAKKKADEAKKAA-EAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKAD------------- 1549
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 710 ELAGLRQQIIATQEKASLDKELMAQKLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWREL-EAERAQLQSQLQREQE 788
Cdd:PTZ00121 1550 ELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAkKAEEAKIKAEELKKAE 1629
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 789 EL---LARLEAEKEELSEEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLATISLEMERQKRDAQSR 865
Cdd:PTZ00121 1630 EEkkkVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKK 1709
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 866 QEQDRSTVNALTSELRDLRAQREEAAAAHAQEVRRLQEQAR-DLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQ 944
Cdd:PTZ00121 1710 KEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKkDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEED 1789
|
....*...
gi 2217272553 945 RKLRESQE 952
Cdd:PTZ00121 1790 EKRRMEVD 1797
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
355-1121 |
5.10e-09 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 61.67 E-value: 5.10e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 355 QRLRSANELLSREKSNLAHSLQVAQQQAEELRQEREklqaAQEELRRQRDRLEEEQEDAVQ------DGARVRRE--LER 426
Cdd:pfam15921 92 RRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERD----AMADIRRRESQSQEDLRNQLQntvhelEAAKCLKEdmLED 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 427 SHRQLEQL-------EGKRSVLAKELVEVREALSRATLQRDMLQAEK-AEVAEALTKAEAgrvELELSMTKLRAEEASLQ 498
Cdd:pfam15921 168 SNTQIEQLrkmmlshEGVLQEIRSILVDFEEASGKKIYEHDSMSTMHfRSLGSAISKILR---ELDTEISYLKGRIFPVE 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 499 DSLSKLSALNES-----LAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVA---------- 563
Cdd:pfam15921 245 DQLEALKSESQNkiellLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMymrqlsdles 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 564 -----RQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEALA 638
Cdd:pfam15921 325 tvsqlRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLW 404
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 639 KEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSL-FEVQRQLAQLEARREQLEaegqalllAKETLTGELAGLRQQ 717
Cdd:pfam15921 405 DRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECqGQMERQMAAIQGKNESLE--------KVSSLTAQLESTKEM 476
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 718 IIATQEkasldkELMAQKLVQAEREAQASlreqraaheeDLQRLQREKEAAWRELEAERAQLQSQLQREQEEllarleae 797
Cdd:pfam15921 477 LRKVVE------ELTAKKMTLESSERTVS----------DLTASLQEKERAIEATNAEITKLRSRVDLKLQE-------- 532
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 798 keelseeiaaLQQERDEGLLLAESEKQ-QALSLKESEKTALSEKLMGTRHSLATISLEMERQKRDAQSRQEQDRSTVNAL 876
Cdd:pfam15921 533 ----------LQHLKNEGDHLRNVQTEcEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDR 602
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 877 TSELRDLraqrEEAAAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREV 956
Cdd:pfam15921 603 RLELQEF----KILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEV 678
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 957 qrqeageLRRSLGEGAKERE-ALRRSNEELRSAVKKAESERISLKL--ANEDKEQKLAL-LEEARTAVGKEAGELRTGLQ 1032
Cdd:pfam15921 679 -------LKRNFRNKSEEMEtTTNKLKMQLKSAQSELEQTRNTLKSmeGSDGHAMKVAMgMQKQITAKRGQIDALQSKIQ 751
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1033 EVERSRLEARRELQELRRQMKMLDSENTRLGRELAELQGRLalgERAEKESRRetlgLRQRLLKGEASLEVMRQELQVAQ 1112
Cdd:pfam15921 752 FLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGEL---EVLRSQERR----LKEKVANMEVALDKASLQFAECQ 824
|
....*....
gi 2217272553 1113 RKLQEQEGE 1121
Cdd:pfam15921 825 DIIQRQEQE 833
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
313-1137 |
7.06e-09 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 61.14 E-value: 7.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 313 GTLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQ-------VAQQQAEEL 385
Cdd:pfam02463 142 GKIEIIAMMKPERRLEIEEEAAGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQakkaleyYQLKEKLEL 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 386 RQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRATLQRDMLQAE 465
Cdd:pfam02463 222 EEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSE 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 466 KAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATV 545
Cdd:pfam02463 302 LLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKL 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 546 AREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVE 625
Cdd:pfam02463 382 ESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLL 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 626 ALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQALLLAKE 705
Cdd:pfam02463 462 KDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENY 541
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 706 TLTGELAGLRQQIIATQEKASLDKE--------LMAQKLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEAERA 777
Cdd:pfam02463 542 KVAISTAVIVEVSATADEVEERQKLvraltelpLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKR 621
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 778 QLQSQLQREQEELLARLEAEKEELSEEIAALQQERdeglLLAESEKQQALSLKESEKTALSEKLMGTRHSLATISLEMER 857
Cdd:pfam02463 622 AKVVEGILKDTELTKLKESAKAKESGLRKGVSLEE----GLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRR 697
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 858 QKRDAQSRQEQDRSTVNALTSELRDLRAQREEAAAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLR 937
Cdd:pfam02463 698 QLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELA 777
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 938 RELLEAQRKLRESQEGREVQRQEagELRRSLGEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEAR 1017
Cdd:pfam02463 778 EEREKTEKLKVEEEKEEKLKAQE--EELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEE 855
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1018 TAVGKEAGELRTGLQEVERSRLEARRELQELRRQMKMLDSENTRLGRELAELQGRLALGERAEKESRRETlgLRQRLLKG 1097
Cdd:pfam02463 856 LERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKE--EAEILLKY 933
|
810 820 830 840
....*....|....*....|....*....|....*....|
gi 2217272553 1098 EASLEVMRQELQVAQRKLQEQEGEFRTRERRLLGSLEEAR 1137
Cdd:pfam02463 934 EEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELG 973
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
443-1074 |
1.17e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 60.31 E-value: 1.17e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 443 KELVEVREALSRATLQRDMLQAEKaEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLsklsalnesLAQDKLDLNRLV 522
Cdd:COG4913 235 DDLERAHEALEDAREQIELLEPIR-ELAERYAAARERLAELEYLRAALRLWFAQRRLEL---------LEAELEELRAEL 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 523 AQLEEEKSALQGRQRQAEQEATVAREeqerleelrleqevARQGLEGS-LRVAEQAQEALEQQLPTLRHERSQLQEQLAQ 601
Cdd:COG4913 305 ARLEAELERLEARLDALREELDELEA--------------QIRGNGGDrLEQLEREIERLERELEERERRRARLEALLAA 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 602 LSRQLSGREQELEQARREAQrqvEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQR 681
Cdd:COG4913 371 LGLPLPASAEEFAALRAEAA---ALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALRD 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 682 QLAQ---------------LEARREQLEAE--------GQALLLA--------------KETLTGELAGLR-QQIIATQE 723
Cdd:COG4913 448 ALAEalgldeaelpfvgelIEVRPEEERWRgaiervlgGFALTLLvppehyaaalrwvnRLHLRGRLVYERvRTGLPDPE 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 724 KASLDKELMAQKLVQAEREAQASLRE---QRAAHE--EDLQRLQREKEAAWRE----LEAERAQLQSQLQREQEELLARl 794
Cdd:COG4913 528 RPRLDPDSLAGKLDFKPHPFRAWLEAelgRRFDYVcvDSPEELRRHPRAITRAgqvkGNGTRHEKDDRRRIRSRYVLGF- 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 795 eaekeELSEEIAALQQERDEglllAESEKQQALSLKESEKTALseKLMGTRHSLATISLEMERQKRDAQSRQEQdrstVN 874
Cdd:COG4913 607 -----DNRAKLAALEAELAE----LEEELAEAEERLEALEAEL--DALQERREALQRLAEYSWDEIDVASAERE----IA 671
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 875 ALTSELRDLraqreeaaAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRE-SQEG 953
Cdd:COG4913 672 ELEAELERL--------DASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAaEDLA 743
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 954 REVQRQEAGELRRSLGEGAKEREALRRSNEELRSAVKKAESERISL-KLANEDKEQKLALLEEARTAVGkEAGELRTGLQ 1032
Cdd:COG4913 744 RLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELeRAMRAFNREWPAETADLDADLE-SLPEYLALLD 822
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 2217272553 1033 EVERSRLEARRElqelrrqmKMLDSENTRLGRELAELQGRLA 1074
Cdd:COG4913 823 RLEEDGLPEYEE--------RFKELLNENSIEFVADLLSKLR 856
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1268-1758 |
4.26e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 58.51 E-value: 4.26e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1268 EAVRGALREFLQELRSAQRERDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEEARrsvdgrlSGVQAELALq 1347
Cdd:PRK02224 233 RETRDEADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEER-------DDLLAEAGL- 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1348 eesvrrSERERRATLDQVATLERSLQATESELRASQEKIskmkaneTKLEGDKRRLKEVLDASESRTVKLELQRRSLEGE 1427
Cdd:PRK02224 305 ------DDADAEAVEARREELEDRDEELRDRLEECRVAA-------QAHNEEAESLREDADDLEERAEELREEAAELESE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1428 LQRSRLGLSDREAQAQALQDRVDSLQRQVADSEVKAGTLQLTVERLNGALAKVEESEGALRDKVRGLTEALAQSSA---- 1503
Cdd:PRK02224 372 LEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEAllea 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1504 -----------------SLNSTRDKNLHLQKALTACEHDRQVLQERLDAArQALSEARKQSSSLGEQVQTLRGEVADLEL 1566
Cdd:PRK02224 452 gkcpecgqpvegsphveTIEEDRERVEELEAELEDLEEEVEEVEERLERA-EDLVEAEDRIERLEERREDLEELIAERRE 530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1567 QRVEAEGQLQQLREVLRQRQEGEAAALNTVQKLQDERRLLQERLGSLQRALAQLEAEKREVERSALRLEK---------- 1636
Cdd:PRK02224 531 TIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIRTLLAAiadaedeier 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1637 --DRVALRRTLDKVEREKLRSHEDTVRLSAEKGRLDRtLTGAELELAEAQRQIQQLEAQVVVLEQSHSPAQLEVDAqqqQ 1714
Cdd:PRK02224 611 lrEKREALAELNDERRERLAEKRERKRELEAEFDEAR-IEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGA---V 686
|
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 2217272553 1715 LELQQEVERLRSAQAQTERTLEARERAHRQ--RVSTLKGQLQQELR 1758
Cdd:PRK02224 687 ENELEELEELRERREALENRVEALEALYDEaeELESMYGDLRAELR 732
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
371-622 |
6.82e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 56.70 E-value: 6.82e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 371 LAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVRE 450
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 451 ALSRATLQRDMLQAEKAEVAEALTKAEagrvelELSMTKLRAEEASLQDSLSKLSALNESLAQDKldlnRLVAQLEEEKS 530
Cdd:COG4942 91 EIAELRAELEAQKEELAELLRALYRLG------RQPPLALLLSPEDFLDAVRRLQYLKYLAPARR----EQAEELRADLA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 531 ALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGRE 610
Cdd:COG4942 161 ELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
250
....*....|..
gi 2217272553 611 QELEQARREAQR 622
Cdd:COG4942 241 ERTPAAGFAALK 252
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
297-794 |
7.14e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 57.74 E-value: 7.14e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 297 QVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQ 376
Cdd:PRK02224 238 EADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARRE 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 377 VAQQQAEELRQEREKLQAAQEELRRQRDRLEE-------EQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVR 449
Cdd:PRK02224 318 ELEDRDEELRDRLEECRVAAQAHNEEAESLREdaddleeRAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELR 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 450 EALSRATLQRDMLQAEKAEVAEALTKAEAGRVELElsmTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEk 529
Cdd:PRK02224 398 ERFGDAPVDLGNAEDFLEELREERDELREREAELE---ATLRTARERVEEAEALLEAGKCPECGQPVEGSPHVETIEED- 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 530 salqgRQRQAEQEATVAREEQERLEELRL-EQEVARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSG 608
Cdd:PRK02224 474 -----RERVEELEAELEDLEEEVEEVEERlERAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAE 548
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 609 REQELEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAEREGRTLS------EEATRLRLEKEALEGSLFEVQRQ 682
Cdd:PRK02224 549 LEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIRTLLAaiadaeDEIERLREKREALAELNDERRER 628
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 683 LAQLEARREQLEAE--GQALLLAKETLTGELAGLRQQIIATQEKASLDKELMAQ-KLVQAEREAQASLREQRAAHEEDLQ 759
Cdd:PRK02224 629 LAEKRERKRELEAEfdEARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEiGAVENELEELEELRERREALENRVE 708
|
490 500 510
....*....|....*....|....*....|....*
gi 2217272553 760 RLQREKEAAwRELEAERAQLQSQLQREQEELLARL 794
Cdd:PRK02224 709 ALEALYDEA-EELESMYGDLRAELRQRNVETLERM 742
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
324-1019 |
7.99e-08 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 57.66 E-value: 7.99e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 324 SERRALEEQLQRLRdktdgamQAHEDAQREVQRLRSANELLSReksnlahslqvAQQQAEELRQEREKLQAAQEELRRQR 403
Cdd:PRK04863 506 REQRHLAEQLQQLR-------MRLSELEQRLRQQQRAERLLAE-----------FCKRLGKNLDDEDELEQLQEELEARL 567
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 404 DRLEEEQEDAVQDGARVRRELErshrQLEQLEGKRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVEL 483
Cdd:PRK04863 568 ESLSESVSEARERRMALRQQLE----QLQARIQRLAARAPAWLAAQDALARLREQSGEEFEDSQDVTEYMQQLLEREREL 643
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 484 ELSMTKLRAEEASLQDSLSKLSALN----ESLAQDKLDLN-RLVAQLEE--------EKSALQGRQRQA----------E 540
Cdd:PRK04863 644 TVERDELAARKQALDEEIERLSQPGgsedPRLNALAERFGgVLLSEIYDdvsledapYFSALYGPARHAivvpdlsdaaE 723
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 541 Q--------------EATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEAL------EQQLPTLRHERSQLQEQLA 600
Cdd:PRK04863 724 QlagledcpedlyliEGDPDSFDDSVFSVEELEKAVVVKIADRQWRYSRFPEVPLfgraarEKRIEQLRAEREELAERYA 803
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 601 QLSRQlsgreqeleqaRREAQRQVEALERaarekeaLAKEHAGLAVQlVAAEREGRTLSEEATRLRLEKEALEGSLFEVQ 680
Cdd:PRK04863 804 TLSFD-----------VQKLQRLHQAFSR-------FIGSHLAVAFE-ADPEAELRQLNRRRVELERALADHESQEQQQR 864
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 681 RQLAQLEARREQLEA-EGQALLLAKETLTGELAGLRQQIIATQE-KASLDKElmAQKLVQAEREAqASLREQraahEEDL 758
Cdd:PRK04863 865 SQLEQAKEGLSALNRlLPRLNLLADETLADRVEEIREQLDEAEEaKRFVQQH--GNALAQLEPIV-SVLQSD----PEQF 937
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 759 QRLQREKEAAwrelEAERAQLQSQLqREQEELLARLeaekeelseeiAALQQERDEGLLLAESEKQQALSLK----ESEK 834
Cdd:PRK04863 938 EQLKQDYQQA----QQTQRDAKQQA-FALTEVVQRR-----------AHFSYEDAAEMLAKNSDLNEKLRQRleqaEQER 1001
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 835 TALSEKLMGTRHSLAtislEMERQKRDAQSRQEQDRSTVNALTSELRDLRAQREEAAAAhaqevrRLQEQARDLGKQRDS 914
Cdd:PRK04863 1002 TRAREQLRQAQAQLA----QYNQVLASLKSSYDAKRQMLQELKQELQDLGVPADSGAEE------RARARRDELHARLSA 1071
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 915 CLREAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREALRR-----SNEELRSAV 989
Cdd:PRK04863 1072 NRSRRNQLEKQLTFCEAEMDNLTKKLRKLERDYHEMREQVVNAKAGWCAVLRLVKDNGVERRLHRRelaylSADELRSMS 1151
|
730 740 750
....*....|....*....|....*....|...
gi 2217272553 990 KKAESeriSLKLA---NEDKEQKLALLEEARTA 1019
Cdd:PRK04863 1152 DKALG---ALRLAvadNEHLRDVLRLSEDPKRP 1181
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
329-1002 |
2.53e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 55.89 E-value: 2.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 329 LEEQLQRLR----DKTDGAMQAHEDaqrEVQRLRSANELlsrEKSNLAHSLQVAQQQAEELRQErekLQAAQEELRRQRD 404
Cdd:pfam15921 243 VEDQLEALKsesqNKIELLLQQHQD---RIEQLISEHEV---EITGLTEKASSARSQANSIQSQ---LEIIQEQARNQNS 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 405 RLEEEQEDAVQDGARVRRELERSHRQLEQlegKRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTK--AEAGRVE 482
Cdd:pfam15921 314 MYMRQLSDLESTVSQLRSELREAKRMYED---KIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKllADLHKRE 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 483 LELSMTKLRAEEASLQDSLSKLSA--LNESLAQDKLDLNRLVAQLEEEKSALQGRQRQaeqeatvareeqerleelrleQ 560
Cdd:pfam15921 391 KELSLEKEQNKRLWDRDTGNSITIdhLRRELDDRNMEVQRLEALLKAMKSECQGQMER---------------------Q 449
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 561 EVARQGLEGSLrvaeqaqealeQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEALAKE 640
Cdd:pfam15921 450 MAAIQGKNESL-----------EKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAE 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 641 HAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQalLLAKEtltGELAGLRQQiia 720
Cdd:pfam15921 519 ITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQ--LVGQH---GRTAGAMQV--- 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 721 tqEKASLDKELMAQKLvqaereaqaslreqraaHEEDLQRLQREKEAAWRELEAERAQLQSQLQReqeellarleaekee 800
Cdd:pfam15921 591 --EKAQLEKEINDRRL-----------------ELQEFKILKDKKDAKIRELEARVSDLELEKVK--------------- 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 801 lseeiaalqqerdegLLLAESEKQQALSLKESEKTALSEKLMGTRHSLATISLEMERQKRDAQSRQEQDRSTVNALTSEL 880
Cdd:pfam15921 637 ---------------LVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQL 701
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 881 RdlraqreeaaaAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREVQRQE 960
Cdd:pfam15921 702 K-----------SAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEE 770
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 2217272553 961 AGELRRSLGEGAKEREALRRSNEELRSAVKKAESERISLKLA 1002
Cdd:pfam15921 771 KNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVA 812
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
315-1128 |
6.21e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 54.59 E-value: 6.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 315 LRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAEELRQEREKLQA 394
Cdd:pfam02463 197 LQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKE 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 395 AQEELRRQRDRLEEEQEDAvqdgARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALT 474
Cdd:pfam02463 277 EEKEKKLQEEELKLLAKEE----EELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKRE 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 475 KAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLE 554
Cdd:pfam02463 353 AEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEIL 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 555 ELRLEQEVARQGLEGSLRVAEQAQEALEQ-------QLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEAL 627
Cdd:pfam02463 433 EEEEESIELKQGKLTEEKEELEKQELKLLkdelelkKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVL 512
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 628 ERAAREKEAL-------AKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEvqRQLAQLEARREQLEAEGQAL 700
Cdd:pfam02463 513 LALIKDGVGGriisahgRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRAL--TELPLGARKLRLLIPKLKLP 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 701 LLAKETLTGELAGLRQQIIATQEKASLDKELMAQKLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEAERAQLQ 780
Cdd:pfam02463 591 LKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSE 670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 781 SQLQREQEELLARLEAEKEELSEEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKL-MGTRHSLATISLEMERQK 859
Cdd:pfam02463 671 LTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQdKINEELKLLKQKIDEEEE 750
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 860 RDAQSRQEQDRSTVNALTSELRDLRAQREEAAAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLRRE 939
Cdd:pfam02463 751 EEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKI 830
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 940 LLEAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARTA 1019
Cdd:pfam02463 831 KEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLN 910
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1020 VGKEAGELRTGLQEVERSRLEARRELQELRRQMKMLDSENTRLGRELAELQGRLALGERAEKESRRETLGLRQRLLKGEA 1099
Cdd:pfam02463 911 LLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERY 990
|
810 820
....*....|....*....|....*....
gi 2217272553 1100 SLEVMRQELQVAQRKLQEQEGEFRTRERR 1128
Cdd:pfam02463 991 NKDELEKERLEEEKKKLIRAIIEETCQRL 1019
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
317-535 |
7.00e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.61 E-value: 7.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 317 KQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAEELRQEREKLQAaq 396
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA-- 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 397 eELRRQRDRLEEEQEDAVQDGARVRREL-------ERSHRQLEQLEGKRSVLAKELVEVREALSRATLQRDMLQAEKAEV 469
Cdd:COG4942 98 -ELEAQKEELAELLRALYRLGRQPPLALllspedfLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAEL 176
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2217272553 470 AEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGR 535
Cdd:COG4942 177 EALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
298-965 |
7.86e-07 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 54.57 E-value: 7.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 298 VQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDG--AMQAHEDAQREVQRLRSANELLSR--------- 366
Cdd:COG3096 443 LAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELVCKIAGEveRSQAWQTARELLRRYRSQQALAQRlqqlraqla 522
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 367 EKSNLAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELV 446
Cdd:COG3096 523 ELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAARAP 602
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 447 EVREALSRATLQRDMLQAE---KAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDL-NRLV 522
Cdd:COG3096 603 AWLAAQDALERLREQSGEAladSQEVTAAMQQLLEREREATVERDELAARKQALESQIERLSQPGGAEDPRLLALaERLG 682
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 523 AQLEEEK------------SALQGRQRQA---EQEATVAREEQERLEELRLEQEVAR--QGLEGSLRVAEQAQEAL---- 581
Cdd:COG3096 683 GVLLSEIyddvtledapyfSALYGPARHAivvPDLSAVKEQLAGLEDCPEDLYLIEGdpDSFDDSVFDAEELEDAVvvkl 762
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 582 ---------------------EQQLPTLRHERSQLQEQLAQLSRqlsgreqeleqARREAQRQVEALERAAREKEALAKE 640
Cdd:COG3096 763 sdrqwrysrfpevplfgraarEKRLEELRAERDELAEQYAKASF-----------DVQKLQRLHQAFSQFVGGHLAVAFA 831
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 641 haglavqlVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEA-EGQALLLAKETLTGELAGLRQQII 719
Cdd:COG3096 832 --------PDPEAELAALRQRRSELERELAQHRAQEQQLRQQLDQLKEQLQLLNKlLPQANLLADETLADRLEELREELD 903
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 720 ATQEkasldkelmAQKLVQAEREAQASLREQRAAHEEDLQRLQrEKEAAWRELEAERAQLQSQLQrEQEELLARLEAEKE 799
Cdd:COG3096 904 AAQE---------AQAFIQQHGKALAQLEPLVAVLQSDPEQFE-QLQADYLQAKEQQRRLKQQIF-ALSEVVQRRPHFSY 972
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 800 ELSEEIAALQQERDEGLllaesekQQALSLKESEKTALSEKLMGTRHSLATISLEMErqkrDAQSRQEQDRSTVNALTSE 879
Cdd:COG3096 973 EDAVGLLGENSDLNEKL-------RARLEQAEEARREAREQLRQAQAQYSQYNQVLA----SLKSSRDAKQQTLQELEQE 1041
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 880 LRDLR-AQREEAAAAHAQEVRRLQEQAR-------DLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEA-------Q 944
Cdd:COG3096 1042 LEELGvQADAEAEERARIRRDELHEELSqnrsrrsQLEKQLTRCEAEMDSLQKRLRKAERDYKQEREQVVQAkagwcavL 1121
|
730 740
....*....|....*....|....*.
gi 2217272553 945 RKLRESQEGREVQR-----QEAGELR 965
Cdd:COG3096 1122 RLARDNDVERRLHRrelayLSADELR 1147
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
376-776 |
8.69e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 53.89 E-value: 8.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 376 QVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQ----------DGARVRRELERSHRQLEQLEGKRSVLAKEL 445
Cdd:PRK02224 195 QIEEKEEKDLHERLNGLESELAELDEEIERYEEQREQAREtrdeadevleEHEERREELETLEAEIEDLRETIAETERER 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 446 VEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQL 525
Cdd:PRK02224 275 EELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDL 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 526 EEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQ 605
Cdd:PRK02224 355 EERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEAT 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 606 LSGREQELEQARR--------------EAQRQVEALERAAREKEALAKEHAGL-------------AVQLVAAEREGRTL 658
Cdd:PRK02224 435 LRTARERVEEAEAlleagkcpecgqpvEGSPHVETIEEDRERVEELEAELEDLeeeveeveerlerAEDLVEAEDRIERL 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 659 SEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQALLLAKETLTGELAGLRQQIiatqekASLDKELMAQKLVQ 738
Cdd:PRK02224 515 EERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEV------AELNSKLAELKERI 588
|
410 420 430
....*....|....*....|....*....|....*...
gi 2217272553 739 AEREAQASLREQRAAHEEDLQRLqREKEAAWRELEAER 776
Cdd:PRK02224 589 ESLERIRTLLAAIADAEDEIERL-REKREALAELNDER 625
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
365-587 |
1.03e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.23 E-value: 1.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 365 SREKSNLAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKE 444
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 445 LVEVREALSR--ATLQRDMLQAEKAEV--AEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNR 520
Cdd:COG4942 99 LEAQKEELAEllRALYRLGRQPPLALLlsPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEA 178
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2217272553 521 LVAQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPT 587
Cdd:COG4942 179 LLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
588-1328 |
1.05e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 53.92 E-value: 1.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 588 LRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEALAKEHAGLAvqlvaaEREGRTLSEEATRLRL 667
Cdd:TIGR02169 228 LLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLG------EEEQLRVKEKIGELEA 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 668 EKEALEGSLFEVQRQLAQLEARREQLEAEGQALLLAKETLTGELAGLRQQIIATQEKASLDKELMAQKLVQAEREAQ--A 745
Cdd:TIGR02169 302 EIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKefA 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 746 SLREQRAAHEEDLQRLQREKEaawrELEAERAQLQSQLQREQEELlARLEAEKEELSEEIAALQQERDEglllaeseKQQ 825
Cdd:TIGR02169 382 ETRDELKDYREKLEKLKREIN----ELKRELDRLQEELQRLSEEL-ADLNAAIAGIEAKINELEEEKED--------KAL 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 826 ALSLKESEKTALSEKLMGTRHSLATISLEMER-QKRDAQSRQEQDRstVNALTSELRDLRAQREEAAAAHAQEVRRLQEQ 904
Cdd:TIGR02169 449 EIKKQEWKLEQLAADLSKYEQELYDLKEEYDRvEKELSKLQRELAE--AEAQARASEERVRGGRAVEEVLKASIQGVHGT 526
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 905 ARDLGK---QRDSCLREAEELRTQLRLLEDARDGLRR-ELLEAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREA-LR 979
Cdd:TIGR02169 527 VAQLGSvgeRYATAIEVAAGNRLNNVVVEDDAVAKEAiELLKRRKAGRATFLPLNKMRDERRDLSILSEDGVIGFAVdLV 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 980 RSNEELRSAVKKAeserISLKLANEDKEQKLALLEEARTAV--------------GKEAGELRTGLQEVERSRLEA-RRE 1044
Cdd:TIGR02169 607 EFDPKYEPAFKYV----FGDTLVVEDIEAARRLMGKYRMVTlegelfeksgamtgGSRAPRGGILFSRSEPAELQRlRER 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1045 LQELRRQMKMLDSENTRLGRELAELQGRLALGERAEKESRRETLGLRQRLLKGEASLEVMRQELQVAQRKLQEQEGEFRT 1124
Cdd:TIGR02169 683 LEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKE 762
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1125 RERRLlGSLEEARGTEKQQLD--HARGLELKLEAARAEAAELGLRLSAAEGRAQGLEAELARVEVQRRAAEAQLGGLRSA 1202
Cdd:TIGR02169 763 LEARI-EELEEDLHKLEEALNdlEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQ 841
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1203 LRrglglgrapspaprpvpgspardapaegsgeglnspSTLECSPGSQPPSPGPATSPASPDLDPEAVRGALREFLQELR 1282
Cdd:TIGR02169 842 RI------------------------------------DLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLG 885
|
730 740 750 760
....*....|....*....|....*....|....*....|....*.
gi 2217272553 1283 SAQRERDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEE 1328
Cdd:TIGR02169 886 DLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEE 931
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
609-843 |
1.08e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.84 E-value: 1.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 609 REQELEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEAtrlrlekEALEGSLFEVQRQLAQLEA 688
Cdd:COG4942 25 AEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQEL-------AALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 689 RREQLEAEGQALLLAKETLtGELAGLRQQIIATQEKASLDKELMAQKLVQAEREAQASLREQRA---AHEEDLQRLQREK 765
Cdd:COG4942 98 ELEAQKEELAELLRALYRL-GRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAelaALRAELEAERAEL 176
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217272553 766 EAAWRELEAERAQLQsQLQREQEELLARLEAEKEELSEEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKLMG 843
Cdd:COG4942 177 EALLAELEEERAALE-ALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKG 253
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
289-668 |
1.57e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 53.12 E-value: 1.57e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 289 SALHKRQLQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDK---TDGAMQAHEDAQREVQRLRSANELLS 365
Cdd:PRK02224 377 EAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREReaeLEATLRTARERVEEAEALLEAGKCPE 456
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 366 REKSnLAHSLQVAqqQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVqdgarvrrELERSHRQLEQLEGKRSVLAKEL 445
Cdd:PRK02224 457 CGQP-VEGSPHVE--TIEEDRERVEELEAELEDLEEEVEEVEERLERAE--------DLVEAEDRIERLEERREDLEELI 525
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 446 VEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQdslSKLSALNESLAQdkldLNRLVAQL 525
Cdd:PRK02224 526 AERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELN---SKLAELKERIES----LERIRTLL 598
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 526 EEEKSALQGRQRQAEQEATVAREEQERLEELRleqevarqglEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQ 605
Cdd:PRK02224 599 AAIADAEDEIERLREKREALAELNDERRERLA----------EKRERKRELEAEFDEARIEEAREDKERAEEYLEQVEEK 668
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2217272553 606 LsgreQELEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAE---REGRTLSEEATRLRLE 668
Cdd:PRK02224 669 L----DELREERDDLQAEIGAVENELEELEELRERREALENRVEALEalyDEAEELESMYGDLRAE 730
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
291-1058 |
1.87e-06 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 53.13 E-value: 1.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 291 LHKRQLQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHE---------------DAQREVQ 355
Cdd:TIGR00606 250 LKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEKVFQGTDEQLNDLYhnhqrtvrekerelvDCQRELE 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 356 RLRSANELLSREKSNLahslqVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQeDAVQDGARVRRELERSHR-QLEQL 434
Cdd:TIGR00606 330 KLNKERRLLNQEKTEL-----LVEQGRLQLQADRHQEHIRARDSLIQSLATRLEL-DGFERGPFSERQIKNFHTlVIERQ 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 435 EGKRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEAL----TKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNES 510
Cdd:TIGR00606 404 EDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIelkkEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKA 483
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 511 LAQ-DKLDLNRLVAQLEEEKSALQGRQ----RQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQA-------- 577
Cdd:TIGR00606 484 ERElSKAEKNSLTETLKKEVKSLQNEKadldRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKsrhsdelt 563
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 578 --------QEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQvealeraaREKEALAKEHAGLAVQLV 649
Cdd:TIGR00606 564 sllgyfpnKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESK--------EEQLSSYEDKLFDVCGSQ 635
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 650 AAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQALLLAKETLTGELAGLRQQI-IATQEKASLD 728
Cdd:TIGR00606 636 DEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLrLAPDKLKSTE 715
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 729 KELmaqKLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEAERAQLQSQLQrEQEELLARLEAEKEELSEEIAAL 808
Cdd:TIGR00606 716 SEL---KKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIE-EQETLLGTIMPEEESAKVCLTDV 791
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 809 QQERDEGLLLAESEKQQALSLKESEK-------TALSEKLMGTRHSLATISLEMERQKRDAQSRQEQD---RSTVNALTS 878
Cdd:TIGR00606 792 TIMERFQMELKDVERKIAQQAAKLQGsdldrtvQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIqhlKSKTNELKS 871
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 879 ELRDLRAQREEAAAahaqevrrLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREVQR 958
Cdd:TIGR00606 872 EKLQIGTNLQRRQQ--------FEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKV 943
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 959 QEAGELRRSLGEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARTAVGKEAGELRTGLQEVERSR 1038
Cdd:TIGR00606 944 NDIKEKVKNIHGYMKDIENKIQDGKDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTL 1023
|
810 820
....*....|....*....|
gi 2217272553 1039 LEARRELQELRRQMKMLDSE 1058
Cdd:TIGR00606 1024 RKRENELKEVEEELKQHLKE 1043
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
572-1186 |
2.58e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 52.81 E-value: 2.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 572 RVAEQAQEALEQQLPTLRHERSQLQ-----------EQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEALAKE 640
Cdd:pfam15921 134 RRESQSQEDLRNQLQNTVHELEAAKclkedmledsnTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMSTM 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 641 HaglavqlvaAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEA---------------RREQL----EAEGQALL 701
Cdd:pfam15921 214 H---------FRSLGSAISKILRELDTEISYLKGRIFPVEDQLEALKSesqnkielllqqhqdRIEQLisehEVEITGLT 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 702 LAKETLTGELAGLRQQIIATQEKASLDKELMAQKLVQAE---REAQASLREQRAAHEEDLQRLQREKEAAWRELEAERAQ 778
Cdd:pfam15921 285 EKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLEstvSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTE 364
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 779 lQSQLQREQEELLARLeaekeelseeiaalqqerdEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLATISLEMERQ 858
Cdd:pfam15921 365 -RDQFSQESGNLDDQL-------------------QKLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDR 424
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 859 KRDAQSRQeqdrSTVNALTSELRDLRAQREEAAAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDArdglRR 938
Cdd:pfam15921 425 NMEVQRLE----ALLKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESS----ER 496
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 939 ELLEAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREALRRSNEELRSAvkKAESERISLKLANEDK-----EQKLALL 1013
Cdd:pfam15921 497 TVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNV--QTECEALKLQMAEKDKvieilRQQIENM 574
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1014 EEARTAVGKEAGELRTGLQEVERSRLEARRELQELR-------RQMKMLDSENTRLGRELAELQGRLALGERAEKESRRE 1086
Cdd:pfam15921 575 TQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKilkdkkdAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQE 654
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1087 TLGLRQRLLKGEASLEVMRQELQVAQRKLQEQEGEFRTRERRLLGSLEEARGTEKQQLDHARGLELKLEAARAEAAELGL 1166
Cdd:pfam15921 655 RDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQK 734
|
650 660
....*....|....*....|
gi 2217272553 1167 RLSAAEGRAQGLEAELARVE 1186
Cdd:pfam15921 735 QITAKRGQIDALQSKIQFLE 754
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
408-1053 |
3.21e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 52.37 E-value: 3.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 408 EEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELElsm 487
Cdd:PRK03918 158 DDYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELE--- 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 488 tKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQErleelrleqevarqgL 567
Cdd:PRK03918 235 -ELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIK---------------L 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 568 EGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSrQLSGREQELEQARREAQRQVEALERAAREKEalakehaglavq 647
Cdd:PRK03918 299 SEFYEEYLDELREIEKRLSRLEEEINGIEERIKELE-EKEERLEELKKKLKELEKRLEELEERHELYE------------ 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 648 lvaaerEGRTLSEEATRLRLEKEALEgsLFEVQRQLAQLEARREQLEAEgqalllaKETLTGELAGLRqqiiatQEKASL 727
Cdd:PRK03918 366 ------EAKAKKEELERLKKRLTGLT--PEKLEKELEELEKAKEEIEEE-------ISKITARIGELK------KEIKEL 424
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 728 DKELMaqKLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEAERAQLQSQLQREQEELLARLEAEKEELSEEIAA 807
Cdd:PRK03918 425 KKAIE--ELKKAKGKCPVCGRELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELA 502
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 808 LQQERDEglllaesEKQQALSLKESEKTAlsEKLMGTRHSLATISLEMERQKRDAQSRQEqdrstvnaLTSELRDLRAQR 887
Cdd:PRK03918 503 EQLKELE-------EKLKKYNLEELEKKA--EEYEKLKEKLIKLKGEIKSLKKELEKLEE--------LKKKLAELEKKL 565
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 888 EEAAAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLRRELleaqRKLRESQEGREVQRQEAGELRRS 967
Cdd:PRK03918 566 DELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREE----KELKKLEEELDKAFEELAETEKR 641
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 968 LGEGAKEREALRRSNEELRSAVKKAESERISLKLANedKEQKLALLEEARTAVGKEAGELRTGLQEVERSRLE------A 1041
Cdd:PRK03918 642 LEELRKELEELEKKYSEEEYEELREEYLELSRELAG--LRAELEELEKRREEIKKTLEKLKEELEEREKAKKEleklekA 719
|
650
....*....|..
gi 2217272553 1042 RRELQELRRQMK 1053
Cdd:PRK03918 720 LERVEELREKVK 731
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
728-1062 |
3.41e-06 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 52.05 E-value: 3.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 728 DKELMAQKLVQAEREAQASLREQRAAHEE-DLQRLQREKEAAWRELEAERAQLQSQLQREQEellaRLEAEKEELSEEIA 806
Cdd:pfam17380 267 ENEFLNQLLHIVQHQKAVSERQQQEKFEKmEQERLRQEKEEKAREVERRRKLEEAEKARQAE----MDRQAAIYAEQERM 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 807 ALQQERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHslatisLEMERQKRDAQSRQEQDRSTVNALTSELRDlraq 886
Cdd:pfam17380 343 AMERERELERIRQEERKRELERIRQEEIAMEISRMRELER------LQMERQQKNERVRQELEAARKVKILEEERQ---- 412
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 887 reeaaaahaqevRRLQEQARDLGKQRdsclREAEELRT-QLRLLEDARDglrRELLEAQRKLRESQEGREVQRQEAGELR 965
Cdd:pfam17380 413 ------------RKIQQQKVEMEQIR----AEQEEARQrEVRRLEEERA---REMERVRLEEQERQQQVERLRQQEEERK 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 966 RSLGEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLAL-LEEARTAVGKEAGELRTGLQEVERSRLEARRE 1044
Cdd:pfam17380 474 RKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEERKRKLLEKeMEERQKAIYEEERRREAEEERRKQQEMEERRR 553
|
330
....*....|....*...
gi 2217272553 1045 LQElrrQMKMLDSENTRL 1062
Cdd:pfam17380 554 IQE---QMRKATEERSRL 568
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
742-1143 |
3.64e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 51.96 E-value: 3.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 742 EAQASLREQRAAHEEDLQRLQREKEAAWRELEAERAQLQSQLQREQEelLARLEAEKEELSEEIAALQQERDEgLLLAES 821
Cdd:PRK02224 206 ERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREE--LETLEAEIEDLRETIAETEREREE-LAEEVR 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 822 EKQQALSLKESEKTALSEKLMGTRHSLATISL---EMERQKRDAQSRQEQDRSTVNALTSELRDLRAQREEAAAAHAqev 898
Cdd:PRK02224 283 DLRERLEELEEERDDLLAEAGLDDADAEAVEArreELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAE--- 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 899 rRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREAL 978
Cdd:PRK02224 360 -ELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTA 438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 979 R---RSNEELRSA-------------------------VKKAESERISLKLANEDKEQKLALLEEARTAvGKEAGELRTG 1030
Cdd:PRK02224 439 RervEEAEALLEAgkcpecgqpvegsphvetieedrerVEELEAELEDLEEEVEEVEERLERAEDLVEA-EDRIERLEER 517
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1031 LQEVE------RSRLEARRE-LQELRRQMKMLDSEN-------TRLGRELAELQGRLAL--GERAEKESRRETLGLRQRL 1094
Cdd:PRK02224 518 REDLEeliaerRETIEEKRErAEELRERAAELEAEAeekreaaAEAEEEAEEAREEVAElnSKLAELKERIESLERIRTL 597
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 2217272553 1095 LKGEASLEVMRQELQVAQRKLQEQE-------GEFRTRERRLLGSLEEARGTEKQQ 1143
Cdd:PRK02224 598 LAAIADAEDEIERLREKREALAELNderrerlAEKRERKRELEAEFDEARIEEARE 653
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
297-585 |
3.90e-06 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 51.06 E-value: 3.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 297 QVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREksnlahsLQ 376
Cdd:COG4372 32 QLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEE-------LE 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 377 VAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRAT 456
Cdd:COG4372 105 SLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQA 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 457 LQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQ 536
Cdd:COG4372 185 LDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELE 264
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2217272553 537 RQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQL 585
Cdd:COG4372 265 LAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGAL 313
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
305-1121 |
4.54e-06 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 51.97 E-value: 4.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 305 YEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGAmqahEDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAEE 384
Cdd:TIGR00606 212 LKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPL----KNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSE 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 385 LRQEREKLQAAQEElrrqrdRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRATLQRDMLQ- 463
Cdd:TIGR00606 288 LELKMEKVFQGTDE------QLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQe 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 464 ---AEKAEVAEALTKAEAGRVE----LELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQ 536
Cdd:TIGR00606 362 hirARDSLIQSLATRLELDGFErgpfSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRT 441
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 537 RQAEQEATVAREEQERLEELRLEQEVARQG----LEGSLRVAEQAQEALEQQ--LPTLRHERSQLQEQLAQLSRQLSGRE 610
Cdd:TIGR00606 442 IELKKEILEKKQEELKFVIKELQQLEGSSDrileLDQELRKAERELSKAEKNslTETLKKEVKSLQNEKADLDRKLRKLD 521
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 611 QELEQARRE--AQRQVEALERAAREKEA----LAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLA 684
Cdd:TIGR00606 522 QEMEQLNHHttTRTQMEMLTKDKMDKDEqirkIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELA 601
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 685 QLEARREQLEAEgqalllaKETLTGELAGLRQQIIATQEKASLDKEL-MAQKLVQAEREAQASLREQRAAHEEDLQRLQR 763
Cdd:TIGR00606 602 SLEQNKNHINNE-------LESKEEQLSSYEDKLFDVCGSQDEESDLeRLKEEIEKSSKQRAMLAGATAVYSQFITQLTD 674
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 764 EKEAAWR------ELEAERAQLQSQLQreqeELLARLEAEKEELSEEIAALQQERDEGLLLAESeKQQALSLKESEKTAL 837
Cdd:TIGR00606 675 ENQSCCPvcqrvfQTEAELQEFISDLQ----SKLRLAPDKLKSTESELKKKEKRRDEMLGLAPG-RQSIIDLKEKEIPEL 749
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 838 SEKLMgtrhslaTISLEMERQKRDAqSRQEQDRSTVNALTSELRDLRAQ---REEAAAAHAQEVRRLQEQARDLgkQRDS 914
Cdd:TIGR00606 750 RNKLQ-------KVNRDIQRLKNDI-EEQETLLGTIMPEEESAKVCLTDvtiMERFQMELKDVERKIAQQAAKL--QGSD 819
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 915 CLREAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREVQRQEAGEL---RRSLGEGAKEREALRRSNEELRS---- 987
Cdd:TIGR00606 820 LDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELkseKLQIGTNLQRRQQFEEQLVELSTevqs 899
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 988 ---AVKKAESERISLKLANED----KEQKLALLEEARTAVGKEAGELRTGLQEVERSRLEARRELQE-LRRQMKMLDSEN 1059
Cdd:TIGR00606 900 lirEIKDAKEQDSPLETFLEKdqqeKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDgKDDYLKQKETEL 979
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2217272553 1060 TRLGRELAELQGRLALGERAEKESRR--ETLGLRQRLLKGEASLEVMRQELQVAQRKLQEQEGE 1121
Cdd:TIGR00606 980 NTVNAQLEECEKHQEKINEDMRLMRQdiDTQKIQERWLQDNLTLRKRENELKEVEEELKQHLKE 1043
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
573-1095 |
4.93e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 51.58 E-value: 4.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 573 VAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQlsgREQElEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAE 652
Cdd:PRK02224 196 IEEKEEKDLHERLNGLESELAELDEEIERYEEQ---REQA-RETRDEADEVLEEHEERREELETLEAEIEDLRETIAETE 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 653 REGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQALLLAKETLTGELAGLRQQIIATQEKAsldkELM 732
Cdd:PRK02224 272 REREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEA----ESL 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 733 AQKLVQAEREAqASLREQRAAHEEDLQrlqrEKEAAWRELEAERAQLQSQLqREQEELLARLEAEKEELSEEIAALQQER 812
Cdd:PRK02224 348 REDADDLEERA-EELREEAAELESELE----EAREAVEDRREEIEELEEEI-EELRERFGDAPVDLGNAEDFLEELREER 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 813 DEgllLAESEKQQALSLKESEKTALSEKLMGTRHSLATISLEMERQKRdaQSRQEQDRSTVNALTSELRDLRAQREEAAA 892
Cdd:PRK02224 422 DE---LREREAELEATLRTARERVEEAEALLEAGKCPECGQPVEGSPH--VETIEEDRERVEELEAELEDLEEEVEEVEE 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 893 ---------AHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREVQRQEAGE 963
Cdd:PRK02224 497 rleraedlvEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAE 576
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 964 LRRSLGEGAKEREALRRSnEELRSAVKKAESERISLklaNEDKEQKLALLEEARTAVGKEAGELRTGLQEVERSRLE-AR 1042
Cdd:PRK02224 577 LNSKLAELKERIESLERI-RTLLAAIADAEDEIERL---REKREALAELNDERRERLAEKRERKRELEAEFDEARIEeAR 652
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 2217272553 1043 RELQELRRQMKMLDSENTRLGRELAELQGRL-----ALGERAEKESRRETLGLRQRLL 1095
Cdd:PRK02224 653 EDKERAEEYLEQVEEKLDELREERDDLQAEIgavenELEELEELRERREALENRVEAL 710
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
286-1071 |
5.22e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 51.88 E-value: 5.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 286 LIHSALHKRQlQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLS 365
Cdd:PRK04863 284 HLEEALELRR-ELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLNLVQTALRQQEKIERYQADLEELEE 362
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 366 ReksnLAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQE-------------DAVQDGARVRRELERSHRQLE 432
Cdd:PRK04863 363 R----LEEQNEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQaldvqqtraiqyqQAVQALERAKQLCGLPDLTAD 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 433 QLEGKRSVLAKELVEVREALSRATLQRDMLQAEKA--EVAEALTKAEAGRV----------ELELSMTKLRAEEASLQDS 500
Cdd:PRK04863 439 NAEDWLEEFQAKEQEATEELLSLEQKLSVAQAAHSqfEQAYQLVRKIAGEVsrseawdvarELLRRLREQRHLAEQLQQL 518
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 501 LSKLSALNESLAQDKlDLNRLVAQLE-----EEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAE 575
Cdd:PRK04863 519 RMRLSELEQRLRQQQ-RAERLLAEFCkrlgkNLDDEDELEQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQR 597
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 576 ---------QAQEALEQqLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREkeaLAKEHAGLAV 646
Cdd:PRK04863 598 laarapawlAAQDALAR-LREQSGEEFEDSQDVTEYMQQLLERERELTVERDELAARKQALDEEIER---LSQPGGSEDP 673
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 647 QLVA-AER-EGRTLSEEATRLRLEK----EALEG---------SLFEVQRQLAQLEARREQL---------------EAE 696
Cdd:PRK04863 674 RLNAlAERfGGVLLSEIYDDVSLEDapyfSALYGparhaivvpDLSDAAEQLAGLEDCPEDLyliegdpdsfddsvfSVE 753
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 697 GQALLLAKETLTGELAGLRQQIIATQEKASLDKELmaqKLVQAEREAQASLREQRAAHEEDLQRL--------------- 761
Cdd:PRK04863 754 ELEKAVVVKIADRQWRYSRFPEVPLFGRAAREKRI---EQLRAEREELAERYATLSFDVQKLQRLhqafsrfigshlava 830
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 762 -QREKEAAWRELEAERAQLQSQLQREQEELLaRLEAEKEELSEEIAALQQERDE-GLLLAESEKQQALSLKESEKTALSE 839
Cdd:PRK04863 831 fEADPEAELRQLNRRRVELERALADHESQEQ-QQRSQLEQAKEGLSALNRLLPRlNLLADETLADRVEEIREQLDEAEEA 909
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 840 KLMGTRHSLATISLE---------------MERQKRDAQSRQEQDRSTVNALTSELRdlraqreeaaaahaqevRRL--- 901
Cdd:PRK04863 910 KRFVQQHGNALAQLEpivsvlqsdpeqfeqLKQDYQQAQQTQRDAKQQAFALTEVVQ-----------------RRAhfs 972
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 902 -QEQARDLGKQRDSclreAEELRTQLRLLEDARDGLRRELLEAQRKLRES-------QEGREVQRQEAGELRRSLG---- 969
Cdd:PRK04863 973 yEDAAEMLAKNSDL----NEKLRQRLEQAEQERTRAREQLRQAQAQLAQYnqvlaslKSSYDAKRQMLQELKQELQdlgv 1048
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 970 ---EGAKEREALRRsnEELRSAVKKAESERISLklanedkEQKLALLEEARTAVGKEAGELRTGLQEVERSRLEARRELQ 1046
Cdd:PRK04863 1049 padSGAEERARARR--DELHARLSANRSRRNQL-------EKQLTFCEAEMDNLTKKLRKLERDYHEMREQVVNAKAGWC 1119
|
890 900
....*....|....*....|....*
gi 2217272553 1047 ELRRQMKMLDSENTRLGRELAELQG 1071
Cdd:PRK04863 1120 AVLRLVKDNGVERRLHRRELAYLSA 1144
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
970-1728 |
5.38e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 51.68 E-value: 5.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 970 EGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARtavgkeagELRTGLQEVERSRLEARRELQELR 1049
Cdd:PTZ00121 1057 EGKAEAKAHVGQDEGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAK--------KTETGKAEEARKAEEAKKKAEDAR 1128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1050 RQMKMLDSENTRLGREL--AELQGRLALGERAEKESRRETLGLRQRLLKGEAS---LEVMR-QELQVAQRKLQEQEGEFR 1123
Cdd:PTZ00121 1129 KAEEARKAEDARKAEEArkAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAArkaEEVRKaEELRKAEDARKAEAARKA 1208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1124 TRERRLlgslEEARGTEkqqlDHARGLELKleaaraeaaelglrlSAAEGRAQGLEAElaRVEVQRRAAEAqlgglrsal 1203
Cdd:PTZ00121 1209 EEERKA----EEARKAE----DAKKAEAVK---------------KAEEAKKDAEEAK--KAEEERNNEEI--------- 1254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1204 rRGLGLGRAPSPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPDLDPEAVRGALREFLQELRS 1283
Cdd:PTZ00121 1255 -RKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADA 1333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1284 AQRERDELRTQTSAlnrQLAEMEAERDSATSRARQLQKAVAESEEARRSVDGrlSGVQAELALQEESVRRSERERRATLD 1363
Cdd:PTZ00121 1334 AKKKAEEAKKAAEA---AKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADA--AKKKAEEKKKADEAKKKAEEDKKKAD 1408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1364 QVATLERSLQATESELRASQEKiskMKANETKLEGDKRRLKEVLDASESRTVKLELQRRSLEGELQRSRLGLSDREAQaq 1443
Cdd:PTZ00121 1409 ELKKAAAAKKKADEAKKKAEEK---KKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAK-- 1483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1444 alqdRVDSLQRQVADSEVKAGTLQLTVERLNGA--LAKVEESEGAlrDKVRGLTEALAQSSASLNSTRDKNLHLQKA--L 1519
Cdd:PTZ00121 1484 ----KADEAKKKAEEAKKKADEAKKAAEAKKKAdeAKKAEEAKKA--DEAKKAEEAKKADEAKKAEEKKKADELKKAeeL 1557
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1520 TACEHDRQVLQ-----ERLDAARQALSEARKQSSSLGEQVQTLRGEVADLELQRVEAEGQLQQLREVLRQRQEGEAAALN 1594
Cdd:PTZ00121 1558 KKAEEKKKAEEakkaeEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQ 1637
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1595 TVQKLQDERRLLQERLGSLQRALAQLEAEKREVERSALRLEKDRVALRRTLDKVEREKLRSHEDTVRLSAEKGRLDRTLT 1674
Cdd:PTZ00121 1638 LKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKK 1717
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....
gi 2217272553 1675 GAELELAEAQRQIQQLEAQVVVLEQSHSPAQLEVDAQQQQLELQQEVERLRSAQ 1728
Cdd:PTZ00121 1718 AEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAE 1771
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1271-1704 |
5.41e-06 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 51.49 E-value: 5.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1271 RGALRE---FLQELRSAQRERDELRTQTSALNRQLA----EMEAERDSATSRARQLQKAVAESEEARRSVDGRLSGVQAE 1343
Cdd:COG3096 235 EAALREnrmTLEAIRVTQSDRDLFKHLITEATNYVAadymRHANERRELSERALELRRELFGARRQLAEEQYRLVEMARE 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1344 LALQEESVRRSERERRATLDQVATLERSLQAteselrasQEKISKMKANETKLEGDKRRLKEVLDASESRTVKLELQRRS 1423
Cdd:COG3096 315 LEELSARESDLEQDYQAASDHLNLVQTALRQ--------QEKIERYQEDLEELTERLEEQEEVVEEAAEQLAEAEARLEA 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1424 LEGELQRSRLGLSDREAQAQALQDRVDSLQRQV---ADSEVKAGTLQLTVERLNGALAKVEESEGALRDKVRGLTEALAQ 1500
Cdd:COG3096 387 AEEEVDSLKSQLADYQQALDVQQTRAIQYQQAVqalEKARALCGLPDLTPENAEDYLAAFRAKEQQATEEVLELEQKLSV 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1501 SSASLNStRDKNLHLQKALTAcEHDRqvlQERLDAARQALSEARKQsSSLGEQVQTLRGEVADLElQRVEAEGQLQQLRE 1580
Cdd:COG3096 467 ADAARRQ-FEKAYELVCKIAG-EVER---SQAWQTARELLRRYRSQ-QALAQRLQQLRAQLAELE-QRLRQQQNAERLLE 539
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1581 VLRQRQEGEAAALNTVQKLQDERRLLQERLGSLQR----ALAQLEAEKREVERSALRLEKDRVALRRTLDKVEREKLRSH 1656
Cdd:COG3096 540 EFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAeaveQRSELRQQLEQLRARIKELAARAPAWLAAQDALERLREQSG 619
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 2217272553 1657 E---DTVRLSAEKGRLDRTLTGAELELAEAQRQIQQLEAQVVVLEQSHSPA 1704
Cdd:COG3096 620 EalaDSQEVTAAMQQLLEREREATVERDELAARKQALESQIERLSQPGGAE 670
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
378-986 |
5.51e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.45 E-value: 5.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 378 AQQQAEELRQEREKLqaaqEELRRQRDRLEEEQEDA-VQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRAT 456
Cdd:COG4913 240 AHEALEDAREQIELL----EPIRELAERYAAARERLaELEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELERLE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 457 LQRDMLQAEKAEVAEALTKAEAGRVElelsmtKLRAEEASLQDSLSKLSALNESLAQDkldLNRLVAQLEEEKSALQGRQ 536
Cdd:COG4913 316 ARLDALREELDELEAQIRGNGGDRLE------QLEREIERLERELEERERRRARLEAL---LAALGLPLPASAEEFAALR 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 537 RQAEQeatvareeqerleelrleqevARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQA 616
Cdd:COG4913 387 AEAAA---------------------LLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLAL 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 617 RREAQRQVEALERAA---------REKEA------------------LAKEHAGLAVQLVAAEREGRTLSEEATRLRLEK 669
Cdd:COG4913 446 RDALAEALGLDEAELpfvgelievRPEEErwrgaiervlggfaltllVPPEHYAAALRWVNRLHLRGRLVYERVRTGLPD 525
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 670 E----ALEGSLFE------------VQRQLAQLEARR-----EQLEAEGQALllakeTLTGELAG-------------LR 715
Cdd:COG4913 526 PerprLDPDSLAGkldfkphpfrawLEAELGRRFDYVcvdspEELRRHPRAI-----TRAGQVKGngtrhekddrrriRS 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 716 QQII---ATQEKASLDKEL-MAQKLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEAERAQLQ-SQLQREQEEL 790
Cdd:COG4913 601 RYVLgfdNRAKLAALEAELaELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREiAELEAELERL 680
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 791 ------LARLEAEKEELSEEIAALQQERDEgLLLAESEKQQALSLKESEKTALSEKLMGTRHSLATISLEMERQKRDAQS 864
Cdd:COG4913 681 dassddLAALEEQLEELEAELEELEEELDE-LKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAAL 759
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 865 RQEQDRSTVNALTSELRDLRAQREEAAAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDardglrRELLEAQ 944
Cdd:COG4913 760 GDAVERELRENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESLPEYLALLDRLEE------DGLPEYE 833
|
650 660 670 680
....*....|....*....|....*....|....*....|....
gi 2217272553 945 RKLRESQEGREVQRQE--AGELRRSLGEGakeREALRRSNEELR 986
Cdd:COG4913 834 ERFKELLNENSIEFVAdlLSKLRRAIREI---KERIDPLNDSLK 874
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1274-1740 |
6.15e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 51.22 E-value: 6.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1274 LREFLQELRSAQRERDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEEARRSVDGRLSGVQaELALQEESVRR 1353
Cdd:PRK03918 219 LREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELK-ELKEKAEEYIK 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1354 SERERRATLDQVATLERSLQATESELRASQEKISKMKANETKLEGDKRRLKEVLDASESRTVKLEL--QRRSLEGELQRS 1431
Cdd:PRK03918 298 LSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELyeEAKAKKEELERL 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1432 RLGLSDR-----EAQAQALQDRVDSLQRQVADSEVKAGTLQLTVERLNGALAKVEESEGALRDKVRGLTEA-----LAQS 1501
Cdd:PRK03918 378 KKRLTGLtpeklEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEhrkelLEEY 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1502 SASLNSTRDKnlhlQKALTACEHDRQVLQERLDAARQALSEARKQsSSLGEQVQTLRGEVADLELQRVEAEGQ----LQQ 1577
Cdd:PRK03918 458 TAELKRIEKE----LKEIEEKERKLRKELRELEKVLKKESELIKL-KELAEQLKELEEKLKKYNLEELEKKAEeyekLKE 532
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1578 LREVLRQRQEGEAAALNTVQKLQDERRLLQERLGSLQRALAQLEAEKREVERSALRLEKDRValrRTLDKVEREKLRSHE 1657
Cdd:PRK03918 533 KLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERL---KELEPFYNEYLELKD 609
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1658 DTVRLSAEKGRLD---RTLTGAELELAEAQRQIQQLEAQVVVLEQSHSPAQLE------VDAQQQQLELQQEVERLRSAQ 1728
Cdd:PRK03918 610 AEKELEREEKELKkleEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEelreeyLELSRELAGLRAELEELEKRR 689
|
490
....*....|..
gi 2217272553 1729 AQTERTLEARER 1740
Cdd:PRK03918 690 EEIKKTLEKLKE 701
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
574-1118 |
7.39e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 51.12 E-value: 7.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 574 AEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEALAKEHAglavqlVAAER 653
Cdd:TIGR00618 210 TPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAV------LEETQ 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 654 EGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEgqalllaketLTGELAGLRQQIIATQEKASLDKELMA 733
Cdd:TIGR00618 284 ERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKL----------LMKRAAHVKQQSSIEEQRRLLQTLHSQ 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 734 QKLVQAEREAQASLREQRAAHEEDLQRL--QREKEAAWRELEAERAQLQSQLQREQEELLARLeaekeelseeiaalQQE 811
Cdd:TIGR00618 354 EIHIRDAHEVATSIREISCQQHTLTQHIhtLQQQKTTLTQKLQSLCKELDILQREQATIDTRT--------------SAF 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 812 RDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLATISLEMERQKRDAQSRQEQDRSTVNALTSELRDLRAQREEAA 891
Cdd:TIGR00618 420 RDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLEL 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 892 AAHA------------------------QEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKL 947
Cdd:TIGR00618 500 QEEPcplcgscihpnparqdidnpgpltRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCD 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 948 RESQEGREVQRQEAGELRRSLGEGAKEREALR-RSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARTAVGKEAGE 1026
Cdd:TIGR00618 580 NRSKEDIPNLQNITVRLQDLTEKLSEAEDMLAcEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQER 659
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1027 LRTGLQEVERSRLEARRELQELRRQMKMLDSENTRLGRELAELQGRLALGERAEKESRRETLGLRQRLLKGEASLEVMRQ 1106
Cdd:TIGR00618 660 VREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAARED 739
|
570
....*....|..
gi 2217272553 1107 ELQVAQRKLQEQ 1118
Cdd:TIGR00618 740 ALNQSLKELMHQ 751
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
91-602 |
9.48e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 50.71 E-value: 9.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 91 LARTSRAVQEAGLGLSTGLRLAESRAEAALEKQALLQAQLEEQLRDKVLREKDLAQQQMQSDLDKADLSARVTELgLAVK 170
Cdd:COG1196 307 LEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEEL-EELA 385
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 171 RLEKQNLEKDQVNKDLTEKLEALESLRLQEQAALETEDGEGLQQTLRDLAQAVLSDSESGVQLSGSERTADASNGSLRGL 250
Cdd:COG1196 386 EELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELL 465
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 251 SGQRTpspprrsspgrgrsprrgpspacsdssTLALIHSALHKRQLQVQDMRGRYEASQDLlgtLRKQLSDSESERRALE 330
Cdd:COG1196 466 AELLE---------------------------EAALLEAALAELLEELAEAAARLLLLLEA---EADYEGFLEGVKAALL 515
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 331 EQLQRLRDKTDGAMQAHEDAQREVQrlrsANELLSREKSNLAHSLQVAQQQAEELRQERE-KLQAAQEELRRQRDRLEEE 409
Cdd:COG1196 516 LAGLRGLAGAVAVLIGVEAAYEAAL----EAALAAALQNIVVEDDEVAAAAIEYLKAAKAgRATFLPLDKIRARAALAAA 591
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 410 QEDAVQDGARVRRELErshrqLEQLEGKRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTK 489
Cdd:COG1196 592 LARGAIGAAVDLVASD-----LREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGS 666
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 490 LRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEG 569
Cdd:COG1196 667 RRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEE 746
|
490 500 510
....*....|....*....|....*....|...
gi 2217272553 570 SLRVAEQAQEALEQQLPTLRHERSQLQEQLAQL 602
Cdd:COG1196 747 LLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
660-1079 |
9.89e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.54 E-value: 9.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 660 EEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQALLLAKETLTGELAGLRQQIIATQEKASLDKELMAQKLVQA 739
Cdd:COG4717 74 KELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEALEAELAELPERLEELEE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 740 EREAQASLREQRAAHEEDLQRLQREKEAAWRELEAERAQLQSQLQREQEELLARLEAEKEELSEEIAALQQERDEgLLLA 819
Cdd:COG4717 154 RLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEE-LEQL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 820 ESEKQQALSLKESEKTALSEKLMGTRHSLATISLEMERQkrdaqsrqeqdRSTVNALTSELRDLRAQREEAAAAHAQEVR 899
Cdd:COG4717 233 ENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSL-----------ILTIAGVLFLVLGLLALLFLLLAREKASLG 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 900 RLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRE-----SQEGREVQRQEAGELRRSLGE--GA 972
Cdd:COG4717 302 KEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQEllreaEELEEELQLEELEQEIAALLAeaGV 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 973 KEREALRRSNEELRSAVK-KAESERISLKLANEDKEQKLALLEEARTAVGKEAGELRTGLQEVERSRLEARRELQELRRQ 1051
Cdd:COG4717 382 EDEEELRAALEQAEEYQElKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEELREELAELEAE 461
|
410 420 430
....*....|....*....|....*....|
gi 2217272553 1052 MKMLDSENT--RLGRELAELQGRLALGERA 1079
Cdd:COG4717 462 LEQLEEDGElaELLQELEELKAELRELAEE 491
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
389-814 |
1.11e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.15 E-value: 1.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 389 REKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRATLQRDMLQAEKAe 468
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ- 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 469 vaealtkaeagrvelelsmtklraeeasLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVARE 548
Cdd:COG4717 127 ----------------------------LLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEE 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 549 EQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSG--REQELEQARREAQRQVEA 626
Cdd:COG4717 179 LEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAaaLEERLKEARLLLLIAAAL 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 627 LERAAREKEALAKEHAGLAVQLVAAEregrTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQALLLAKET 706
Cdd:COG4717 259 LALLGLGGSLLSLILTIAGVLFLVLG----LLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDL 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 707 LTGELAGLRQQIIATQEKASLDKELMAQKLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEAERAQLQSQLQRE 786
Cdd:COG4717 335 SPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEEL 414
|
410 420
....*....|....*....|....*....
gi 2217272553 787 QEELLARLEAEKEEL-SEEIAALQQERDE 814
Cdd:COG4717 415 LGELEELLEALDEEElEEELEELEEELEE 443
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
305-863 |
1.22e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 50.11 E-value: 1.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 305 YEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSReksnlahSLQVAQQQAEE 384
Cdd:pfam05483 221 HEKIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDE-------NLKELIEKKDH 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 385 LRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRaTLQRDMLQA 464
Cdd:pfam05483 294 LTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEE-LLRTEQQRL 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 465 EKAEVAEALTKAEAGRVELELS-MTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEA 543
Cdd:pfam05483 373 EKNEDQLKIITMELQKKSSELEeMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEI 452
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 544 TVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQR- 622
Cdd:pfam05483 453 HDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERm 532
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 623 --QVEALERAARE--------KEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQ 692
Cdd:pfam05483 533 lkQIENLEEKEMNlrdelesvREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEE 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 693 LEAEGQALllaKETLTGELAGLRQQIIATQeKASLDKELMAQKLVQAEREAQASLREQRAAHEEDLQRLQREKEAAwrel 772
Cdd:pfam05483 613 LHQENKAL---KKKGSAENKQLNAYEIKVN-KLELELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKAIA---- 684
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 773 eAERAQLQSQLQREQEELLARLEAEKEELSEEIAALQQERDEGLLLAESEKQQALSLKESEKTALSE---KLMGTRHSLA 849
Cdd:pfam05483 685 -DEAVKLQKEIDKRCQHKIAEMVALMEKHKHQYDKIIEERDSELGLYKNKEQEQSSAKAALEIELSNikaELLSLKKQLE 763
|
570
....*....|....
gi 2217272553 850 TISLEMERQKRDAQ 863
Cdd:pfam05483 764 IEKEEKEKLKMEAK 777
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
316-533 |
1.23e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 50.30 E-value: 1.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 316 RKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAE------------ 383
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREIAELEAElerldassddla 688
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 384 ELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSV-LAKELVEVREALSRATLQRDML 462
Cdd:COG4913 689 ALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLeLRALLEERFAAALGDAVERELR 768
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2217272553 463 QAEKAEVAEALTKAEAGRVELELSMTKLRAE-EASLQDSLSKLSALNESLAQ-DKLDLNRLVAQLEEEKSALQ 533
Cdd:COG4913 769 ENLEERIDALRARLNRAEEELERAMRAFNREwPAETADLDADLESLPEYLALlDRLEEDGLPEYEERFKELLN 841
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
291-606 |
1.27e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 50.02 E-value: 1.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 291 LHKRQLQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSN 370
Cdd:TIGR04523 365 LEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKD 444
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 371 LAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQdgarvrrELERSHRQLEQLEGKRSVLAKELVEVRE 450
Cdd:TIGR04523 445 LTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQK-------ELKSKEKELKKLNEEKKELEEKVKDLTK 517
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 451 ALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTK--LRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEE 528
Cdd:TIGR04523 518 KISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKenLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKE 597
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217272553 529 KSALqgRQRQAEQEATVAReeqerleelrleqevarqgLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQL 606
Cdd:TIGR04523 598 KKDL--IKEIEEKEKKISS-------------------LEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETI 654
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1494-1700 |
1.28e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.76 E-value: 1.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1494 LTEALAQSSASLNSTRDKNLHLQKALTACEHDRQVLQERLDAARQALSEARKQSSSLGEQVQTLRGEVADLELQRVEAEG 1573
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1574 QLQQLREVLRQRQEGEAAALNTVQKLQDERRLL----QERLGSLQRALAQLEAEKREVERSALRLEKDRVALRRTLDKVE 1649
Cdd:COG4942 91 EIAELRAELEAQKEELAELLRALYRLGRQPPLAlllsPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELE 170
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2217272553 1650 REKLRSHEDTVRLSAEKGRLDRTLTGAELELAEAQRQIQQLEAQVVVLEQS 1700
Cdd:COG4942 171 AERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQE 221
|
|
| PRK10246 |
PRK10246 |
exonuclease subunit SbcC; Provisional |
322-794 |
1.37e-05 |
|
exonuclease subunit SbcC; Provisional
Pssm-ID: 182330 [Multi-domain] Cd Length: 1047 Bit Score: 50.18 E-value: 1.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 322 SESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELlSREKSNLAHSLQVAQQQAEELRQEREKLQAAQ--EEL 399
Cdd:PRK10246 214 TPEQVQSLTASLQVLTDEEKQLLTAQQQQQQSLNWLTRLDEL-QQEASRRQQALQQALAAEEKAQPQLAALSLAQpaRQL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 400 RRQRDRLEEeQEDAVqdgARVRRELERSHRQLEQLEGKRSvlakelvEVREALSRatlQRDMLQAEKAEVAEALTKAEAG 479
Cdd:PRK10246 293 RPHWERIQE-QSAAL---AHTRQQIEEVNTRLQSTMALRA-------RIRHHAAK---QSAELQAQQQSLNTWLAEHDRF 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 480 RVeLELSMTKLRAEEASLQDSLSKLSALNESLAQDKldlnrlvaqleeeksalqgRQRQAEQEATVAREEQERLeelrle 559
Cdd:PRK10246 359 RQ-WNNELAGWRAQFSQQTSDREQLRQWQQQLTHAE-------------------QKLNALPAITLTLTADEVA------ 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 560 qevARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARRE--AQRQVEALERAAREKEAL 637
Cdd:PRK10246 413 ---AALAQHAEQRPLRQRLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRykEKTQQLADVKTICEQEAR 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 638 AK---------------------EHAGL----AVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQ 692
Cdd:PRK10246 490 IKdleaqraqlqagqpcplcgstSHPAVeayqALEPGVNQSRLDALEKEVKKLGEEGAALRGQLDALTKQLQRDESEAQS 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 693 LEAEGQALLLAKETLTGELAGLR-----------------QQIIATQEKASLDKELMAQKlvQAEREAQASLREQRAAHE 755
Cdd:PRK10246 570 LRQEEQALTQQWQAVCASLNITLqpqddiqpwldaqeeheRQLRLLSQRHELQGQIAAHN--QQIIQYQQQIEQRQQQLL 647
|
490 500 510 520
....*....|....*....|....*....|....*....|....
gi 2217272553 756 EDLQRL-----QREKEAAWRELEAERAQLQSQLQREQEELLARL 794
Cdd:PRK10246 648 TALAGYaltlpQEDEEASWLATRQQEAQSWQQRQNELTALQNRI 691
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
976-1621 |
1.94e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.91 E-value: 1.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 976 EALRRSNEELRSAVKKAES-ERISLKLANEDKEQKLALLEEARTAVGKEAGELRTGLQEVERSRLEARRELQELRRQMKM 1054
Cdd:COG4913 255 EPIRELAERYAAARERLAElEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRG 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1055 LDsentrlGRELAELQGRLALGERAEKESRRETLGLRQRLLKGEASLEVMRQELQVAQRKLQEqegefrtrerrLLGSLE 1134
Cdd:COG4913 335 NG------GDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAA-----------LLEALE 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1135 EARGTEKQQLDHARGlelkleaaraeaaelglRLSAAEGRAQGLEAELARVEVQRRAAEAQLGGLRSALRRGLGLgrapS 1214
Cdd:COG4913 398 EELEALEEALAEAEA-----------------ALRDLRRELRELEAEIASLERRKSNIPARLLALRDALAEALGL----D 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1215 PAPRPVPGS----PARDAPAEGSGEG-LNSpstlecspgsqppspgPATSPASPDLDPEAVRGA-----LREFLQELRSA 1284
Cdd:COG4913 457 EAELPFVGElievRPEEERWRGAIERvLGG----------------FALTLLVPPEHYAAALRWvnrlhLRGRLVYERVR 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1285 QRERDELRTQTSAlNRQLAEMEAERDSATSRARQL---QKAVA--ESEEARRSVD--------GRLSGVQAELALQEESV 1351
Cdd:COG4913 521 TGLPDPERPRLDP-DSLAGKLDFKPHPFRAWLEAElgrRFDYVcvDSPEELRRHPraitragqVKGNGTRHEKDDRRRIR 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1352 RRSERERRATlDQVATLERSLQATESELRASQEKISKMKANETKLEGDKRRLKEVLDASESRTVKLELQRRSLEGELQRS 1431
Cdd:COG4913 600 SRYVLGFDNR-AKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREIAELEAELE 678
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1432 RLGLSDR-----EAQAQALQDRVDSLQRQVADSEVKAGTLQltvERLNGALAKVEESEGALRDKVRGLTEALAQSSASLN 1506
Cdd:COG4913 679 RLDASSDdlaalEEQLEELEAELEELEEELDELKGEIGRLE---KELEQAEEELDELQDRLEAAEDLARLELRALLEERF 755
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1507 STRDKNLHLQKALTACEHDRQVLQERLDAARQALSEARKQ-SSSLGEQVQTLRGEVADLE-----LQRVEAEG---QLQQ 1577
Cdd:COG4913 756 AAALGDAVERELRENLEERIDALRARLNRAEEELERAMRAfNREWPAETADLDADLESLPeylalLDRLEEDGlpeYEER 835
|
650 660 670 680
....*....|....*....|....*....|....*....|....
gi 2217272553 1578 LREVLRQRQEGEAAALNtvQKLQDERRLLQERLGSLQRALAQLE 1621
Cdd:COG4913 836 FKELLNENSIEFVADLL--SKLRRAIREIKERIDPLNDSLKRIP 877
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
315-615 |
2.05e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 49.63 E-value: 2.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 315 LRKQLSDSESERRALEEQLQRLRDKTdgamqahEDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAEELRQEREKLQA 394
Cdd:TIGR04523 347 LKKELTNSESENSEKQRELEEKQNEI-------EKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQ 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 395 AQEELRRQRDRLEEEQEDAVQDGARVRRE----------LERSHRQLEQ----LEGKRSVLAKELVEVREALSRATLQRD 460
Cdd:TIGR04523 420 EKELLEKEIERLKETIIKNNSEIKDLTNQdsvkeliiknLDNTRESLETqlkvLSRSINKIKQNLEQKQKELKSKEKELK 499
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 461 MLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQdslSKLSALNESLAQDKLDLNRlvAQLEEEKSALQGRQRQAE 540
Cdd:TIGR04523 500 KLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKE---SKISDLEDELNKDDFELKK--ENLEKEIDEKNKEIEELK 574
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217272553 541 QEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQ 615
Cdd:TIGR04523 575 QTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQ 649
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
733-1492 |
2.07e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 49.75 E-value: 2.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 733 AQKLVQAEREAQASLREQRAAHEEDLQRLQ--REKEAAWRELEAERAQLQSQLQREQEELLARLEAEKEELSEEIAALQQ 810
Cdd:PTZ00121 1096 AFGKAEEAKKTETGKAEEARKAEEAKKKAEdaRKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDA 1175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 811 ERDEGLLLAEsEKQQALSLKESEKTalseklmgtRHSLATISLEMERQKRDAQSRQEQDRSTVNALTSELRDLRAQREEA 890
Cdd:PTZ00121 1176 KKAEAARKAE-EVRKAEELRKAEDA---------RKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKA 1245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 891 AAAHAQEVRRLQEQARDLGKQRDSCLREAEELRT--QLRLLEDARDGLRRELLEAQRKLRESQEGREvQRQEAGELRRSL 968
Cdd:PTZ00121 1246 EEERNNEEIRKFEEARMAHFARRQAAIKAEEARKadELKKAEEKKKADEAKKAEEKKKADEAKKKAE-EAKKADEAKKKA 1324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 969 GEGAKEREALRRSNEELRSA--VKKAESERISLKLANEDKEQKLAllEEARTAVGKEAGELRTGLQEVERSRlEARRELQ 1046
Cdd:PTZ00121 1325 EEAKKKADAAKKKAEEAKKAaeAAKAEAEAAADEAEAAEEKAEAA--EKKKEEAKKKADAAKKKAEEKKKAD-EAKKKAE 1401
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1047 ELRRQMKmldsentRLGRELAELQGRLALGERAEKESRRETLGLRQRLLKGEASLEVMRQELQVAQRKLQEQEGEFRTRE 1126
Cdd:PTZ00121 1402 EDKKKAD-------ELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADE 1474
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1127 rrLLGSLEEARGTEkqqldharglELKLEAARAEAAELGLRLSAAEGRAQgleAELARVEVQRRAAEAQlgglrsalrrg 1206
Cdd:PTZ00121 1475 --AKKKAEEAKKAD----------EAKKKAEEAKKKADEAKKAAEAKKKA---DEAKKAEEAKKADEAK----------- 1528
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1207 lglgrapsPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATspaspdldpEAVRGALREFLQELRSAQR 1286
Cdd:PTZ00121 1529 --------KAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKA---------EEDKNMALRKAEEAKKAEE 1591
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1287 ERDElrtqtsalnrqlAEMEAERDSATSRARQLQKAvaesEEARRSVDGRLSGVQAELALQEESVRRSERERRAtlDQVA 1366
Cdd:PTZ00121 1592 ARIE------------EVMKLYEEEKKMKAEEAKKA----EEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKA--EELK 1653
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1367 TLERSLQATESELRASQEKISKMKANETKLEGDKRRLKEVLDASESRTVKLELQRRSLEGELQRS---RLGLSDREAQAQ 1443
Cdd:PTZ00121 1654 KAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAeelKKAEEENKIKAE 1733
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|...
gi 2217272553 1444 ALQDRVDSLQRQV----ADSEVKAGTLQLTVERLNGALAKVEESEGALRDKVR 1492
Cdd:PTZ00121 1734 EAKKEAEEDKKKAeeakKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELD 1786
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
314-850 |
2.76e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 49.20 E-value: 2.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 314 TLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAEELRQEREKLQ 393
Cdd:TIGR00618 271 ELRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTL 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 394 AAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVR--------EALSRATLQRDMLQAE 465
Cdd:TIGR00618 351 HSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQreqatidtRTSAFRDLQGQLAHAK 430
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 466 KAEVAEaLTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNR----------LVAQLEEEKSALQGR 535
Cdd:TIGR00618 431 KQQELQ-QRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQetrkkavvlaRLLELQEEPCPLCGS 509
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 536 QRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQ------QLPTLRHERSQLQEQLAQLSRQLSGR 609
Cdd:TIGR00618 510 CIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQraslkeQMQEIQQSFSILTQCDNRSKEDIPNL 589
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 610 EQELEQARREAQRQVEALERAARE--------KEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQR 681
Cdd:TIGR00618 590 QNITVRLQDLTEKLSEAEDMLACEqhallrklQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRV 669
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 682 QLAQLEARREQLEAEGQALllaKETLTGELAGLRQQIIATQEKASLDKEL--MAQKLVQAEREAQASLREQRAAHEEDLQ 759
Cdd:TIGR00618 670 LPKELLASRQLALQKMQSE---KEQLTYWKEMLAQCQTLLRELETHIEEYdrEFNEIENASSSLGSDLAAREDALNQSLK 746
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 760 RLQREKEAAWRELEAERAQLQSQLQREqEELLARLEAEKEELSEEIAALqQERDEGLLLAESEKQQALSLKESEKTALSE 839
Cdd:TIGR00618 747 ELMHQARTVLKARTEAHFNNNEEVTAA-LQTGAELSHLAAEIQFFNRLR-EEDTHLLKTLEAEIGQEIPSDEDILNLQCE 824
|
570
....*....|.
gi 2217272553 840 KLMGTRHSLAT 850
Cdd:TIGR00618 825 TLVQEEEQFLS 835
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1279-1507 |
2.84e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.61 E-value: 2.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1279 QELRSAQRERDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEEARRSVDGRLSGVQAELALQEESVRRSERER 1358
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1359 RATLDQVATLERSLQATES----ELRASQEKISKMKANETKLEGDKRRLKEVLDASESRTVKLELQRRSLEGELQRSRLG 1434
Cdd:COG4942 100 EAQKEELAELLRALYRLGRqpplALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2217272553 1435 LSDREAQAQALQDRVDSLQRQVADsevkagtLQLTVERLNGALAKVEESEGALRDKVRGLTEALAQSSASLNS 1507
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLAR-------LEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
667-1205 |
2.93e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.14 E-value: 2.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 667 LEKEALEGSLFEVQRQLAQL-EARREQLEAEGQALLLAketltgELAGLRQQIIATQEKASLDKELMAQKLVQAEREAQA 745
Cdd:COG4913 218 LEEPDTFEAADALVEHFDDLeRAHEALEDAREQIELLE------PIRELAERYAAARERLAELEYLRAALRLWFAQRRLE 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 746 SLREQRAAHEEDLQRLQREK---EAAWRELEAERAQLQSQLQREQEELLARLEAEKEELSEEIAALQQERDEgllLAESE 822
Cdd:COG4913 292 LLEAELEELRAELARLEAELerlEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRAR---LEALL 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 823 KQQALSLKESEK--TALSEKLMGTRHSLATISLEMERQKRDAQSRQEQDRSTVNALTSELRDLRAQREEAAAAHAQEVRR 900
Cdd:COG4913 369 AALGLPLPASAEefAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALRDA 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 901 LqeqARDLGKQRDSC--------LREAEE---------LRTQ-LRLLEDARDglRRELLEA--QRKLRESQEGREVQRQE 960
Cdd:COG4913 449 L---AEALGLDEAELpfvgelieVRPEEErwrgaiervLGGFaLTLLVPPEH--YAAALRWvnRLHLRGRLVYERVRTGL 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 961 AGELRRSLGEGA-------KEREALRRSNEEL--RSAVKKAESERislKLANEDKeqklALLEEARTAVGKEAGELRTGL 1031
Cdd:COG4913 524 PDPERPRLDPDSlagkldfKPHPFRAWLEAELgrRFDYVCVDSPE---ELRRHPR----AITRAGQVKGNGTRHEKDDRR 596
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1032 QEVE--------RSRLEA-RRELQELRRQMKMLDSENTRLGRELAELQGRLALGERAEK------------ESRRETLGL 1090
Cdd:COG4913 597 RIRSryvlgfdnRAKLAAlEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEyswdeidvasaeREIAELEAE 676
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1091 RQRLLKGEASLEVMRQELQVAQRKLQEQEGEFRTRERRlLGSLEEARGTEKQQLDHARGLELKLEAARAEAAELGLRLSA 1170
Cdd:COG4913 677 LERLDASSDDLAALEEQLEELEAELEELEEELDELKGE-IGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERF 755
|
570 580 590
....*....|....*....|....*....|....*.
gi 2217272553 1171 AEGRAQGLEAELAR-VEVQRRAAEAQLGGLRSALRR 1205
Cdd:COG4913 756 AAALGDAVERELREnLEERIDALRARLNRAEEELER 791
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1531-1762 |
3.31e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 48.90 E-value: 3.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1531 ERLDAARQALSEARKqsSSLGEQVQTLRGEVADLELQRVEAEGQLQQLREVLRQRQEGEAAALNTVQKLQDERRLLQERL 1610
Cdd:TIGR02168 213 ERYKELKAELRELEL--ALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKEL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1611 GSLQRALAQLEAEKREVERSALRLEKDRVALRRTLDKVEREKLRSHEDTVRLSAEKGRLDRTLTGAELELAEAQRQIQQL 1690
Cdd:TIGR02168 291 YALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEEL 370
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2217272553 1691 EAQVVVLEQSHSPAQLEV-DAQQQQLELQQEVERLRSAQAQTERTLEARERAHRQRVSTLKGQLQQELRRSSA 1762
Cdd:TIGR02168 371 ESRLEELEEQLETLRSKVaQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELE 443
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
314-841 |
3.59e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 48.86 E-value: 3.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 314 TLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANE---LLSREKSNLAHSLQVAQQQAEELRQERE 390
Cdd:TIGR04523 163 DLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQknkSLESQISELKKQNNQLKDNIEKKQQEIN 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 391 KLQAAQEELRRQRDRLEEEQEdavqdgaRVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRatlqrdmLQAEKAEVA 470
Cdd:TIGR04523 243 EKTTEISNTQTQLNQLKDEQN-------KIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISD-------LNNQKEQDW 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 471 EALTKAEagrvelelsmtkLRAEEASLQDSLSKLSALNESLAQdkldLNRLVAQLEEEKSAL----QGRQRQAEQEatva 546
Cdd:TIGR04523 309 NKELKSE------------LKNQEKKLEEIQNQISQNNKIISQ----LNEQISQLKKELTNSesenSEKQRELEEK---- 368
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 547 reeqerleelrleqevarqglegslrvaeqaqealEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEA 626
Cdd:TIGR04523 369 -----------------------------------QNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQ 413
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 627 LERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQALLLAKET 706
Cdd:TIGR04523 414 IKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKS 493
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 707 LTGELAGLrqqiiaTQEKASLDKELmaQKLVQaereAQASLREQraahEEDLQRLQREKEAAWRELEAERAQLQSQLQRE 786
Cdd:TIGR04523 494 KEKELKKL------NEEKKELEEKV--KDLTK----KISSLKEK----IEKLESEKKEKESKISDLEDELNKDDFELKKE 557
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 2217272553 787 QeellarLEAEKEELSEEIAALQQERDEgLLLAESEKQQALSLKESEKTALSEKL 841
Cdd:TIGR04523 558 N------LEKEIDEKNKEIEELKQTQKS-LKKKQEEKQELIDQKEKEKKDLIKEI 605
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
564-774 |
3.96e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.84 E-value: 3.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 564 RQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEALAKEhag 643
Cdd:COG4942 29 LEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEE--- 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 644 LAVQLVAAEREGRT-------LSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQALLLAKETLTGELAGLRQ 716
Cdd:COG4942 106 LAELLRALYRLGRQpplalllSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEE 185
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 717 QIIATQEKASLDKELMAQ--KLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEA 774
Cdd:COG4942 186 ERAALEALKAERQKLLARleKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1371-1592 |
4.24e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.84 E-value: 4.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1371 SLQATESELRASQEKISKMKANETKLEGDKRRLKEVLDASESRTVKLELQRRSLEGELQRSRLGLSDREAQAQALQDRVD 1450
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1451 SLQRQVADSEVKAGTLQLTVERLngALAKVEESEGALR--DKVRGLTEALAQSSASLNSTRDKNLHLQKALTACEHDRQV 1528
Cdd:COG4942 101 AQKEELAELLRALYRLGRQPPLA--LLLSPEDFLDAVRrlQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEA 178
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2217272553 1529 LQERLDAARQALSEARKQSSSLGEQVQTLRGEVADLELQRVEAEGQLQQLREVLRQRQEGEAAA 1592
Cdd:COG4942 179 LLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1280-1702 |
4.96e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 48.58 E-value: 4.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1280 ELRSAQRERDELRTQTSALNRQLAEMEAE---RDSATSRARQLQKAVAESEEA--------RRSVDGR----------LS 1338
Cdd:pfam15921 357 ELTEARTERDQFSQESGNLDDQLQKLLADlhkREKELSLEKEQNKRLWDRDTGnsitidhlRRELDDRnmevqrlealLK 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1339 GVQAELALQEESVRRSERERRATLDQVATLERSLQATESELRASQEKISKMK----ANETKLEGDKRRLKEVLDASESRT 1414
Cdd:pfam15921 437 AMKSECQGQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKmtleSSERTVSDLTASLQEKERAIEATN 516
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1415 VKLELQRRSLEGELQRSRlGLSDREAQAQALQDRVDSLQRQVADSEVKAGTLQLTVERLNGALAKVEESEGALRDKVRGL 1494
Cdd:pfam15921 517 AEITKLRSRVDLKLQELQ-HLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQL 595
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1495 TEALAQSSASLNS---TRDKNLHLQKALTACEHDRQVLQ--------ERLDAAR-------QALSE---ARKQSSSLGEQ 1553
Cdd:pfam15921 596 EKEINDRRLELQEfkiLKDKKDAKIRELEARVSDLELEKvklvnagsERLRAVKdikqerdQLLNEvktSRNELNSLSED 675
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1554 VQTLRGEVAD-----------LELQRVEAEGQLQQLREVLRQRQEGEAAALNTVQKLQDERR-------LLQERLGSLQR 1615
Cdd:pfam15921 676 YEVLKRNFRNkseemetttnkLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITakrgqidALQSKIQFLEE 755
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1616 ALAQLEAEKR--EVERSALRLEKDRVALRRTLDKVEREKLRSHEDtvRLSAEKGRLDRTLTGAELELAEAQRQIQQLEAQ 1693
Cdd:pfam15921 756 AMTNANKEKHflKEEKNKLSQELSTVATEKNKMAGELEVLRSQER--RLKEKVANMEVALDKASLQFAECQDIIQRQEQE 833
|
....*....
gi 2217272553 1694 VVVLEQSHS 1702
Cdd:pfam15921 834 SVRLKLQHT 842
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1268-1739 |
5.00e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.53 E-value: 5.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1268 EAVRGALREFLQELRSAQRERDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEEARRSVDGRLSGVQAELALQ 1347
Cdd:TIGR02169 304 ASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAET 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1348 EESVRRSERERRATLDQVATLERSLQATESELRASQEKISKMKANETKLEGDKRRLKEVLDASESRTVKLELQRRSLEGE 1427
Cdd:TIGR02169 384 RDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAAD 463
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1428 LQRSRLGLSDREAQAQALQDRVDSLQRQVADSEVKAGTLQLTV-----------ERLNGAL--------------AKVEE 1482
Cdd:TIGR02169 464 LSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVrggraveevlkASIQGVHgtvaqlgsvgeryaTAIEV 543
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1483 SEGALRDKVRGLTEALAQSSAS--------------LNSTRDKNLHLQK---------ALTACEHDRQ------------ 1527
Cdd:TIGR02169 544 AAGNRLNNVVVEDDAVAKEAIEllkrrkagratflpLNKMRDERRDLSIlsedgvigfAVDLVEFDPKyepafkyvfgdt 623
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1528 VLQERLDAARQALSEARkqssslgeqVQTLRGEVadLELQRVEAEGQLQQLREVLRQRQEGEAAAL--NTVQKLQDERRL 1605
Cdd:TIGR02169 624 LVVEDIEAARRLMGKYR---------MVTLEGEL--FEKSGAMTGGSRAPRGGILFSRSEPAELQRlrERLEGLKRELSS 692
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1606 LQERLGSLQRALAQLEAEKREVERSALRLEKDRVALRRTLDKVEREKLRSHEDTVRLSAEKGRLDRTLTGAELELAEAQR 1685
Cdd:TIGR02169 693 LQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEE 772
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 2217272553 1686 QIQQLEAQVVVLEQSHSPAQLEvDAQQQQLELQQEVERLRSAQAQTERTLEARE 1739
Cdd:TIGR02169 773 DLHKLEEALNDLEARLSHSRIP-EIQAELSKLEEEVSRIEARLREIEQKLNRLT 825
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
290-416 |
5.43e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 48.37 E-value: 5.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 290 ALHKRQLQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKS 369
Cdd:COG4913 665 SAEREIAELEAELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLAR 744
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 2217272553 370 NLAHSL---QVAQQQAEELRQE-REKLQAAQEELRRQRDRLEEEQEDAVQD 416
Cdd:COG4913 745 LELRALleeRFAAALGDAVERElRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
630-831 |
5.50e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.45 E-value: 5.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 630 AAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQALLLAKETLTG 709
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 710 ELAGLRQQI---IATQEKASLDKELM----AQKLVQAEREAQ--ASLREQRAAHEEDLQRLQREKEAAWRELEAERAQLQ 780
Cdd:COG4942 98 ELEAQKEELaelLRALYRLGRQPPLAlllsPEDFLDAVRRLQylKYLAPARREQAEELRADLAELAALRAELEAERAELE 177
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2217272553 781 SQLQrEQEELLARLEAEKEELSEEIAALQQERDEGLLLAESEKQQALSLKE 831
Cdd:COG4942 178 ALLA-ELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEA 227
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
290-636 |
5.80e-05 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 47.37 E-value: 5.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 290 ALHKRQLQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKS 369
Cdd:pfam19220 7 LLRVRLGEMADRLEDLRSLKADFSQLIEPIEAILRELPQAKSRLLELEALLAQERAAYGKLRRELAGLTRRLSAAEGELE 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 370 NLAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVR 449
Cdd:pfam19220 87 ELVARLAKLEAALREAEAAKEELRIELRDKTAQAEALERQLAAETEQNRALEEENKALREEAQAAEKALQRAEGELATAR 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 450 EALSRATLQRDMLQAEKAEVAEALTKAEAgrvelelsmtKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEK 529
Cdd:pfam19220 167 ERLALLEQENRRLQALSEEQAAELAELTR----------RLAELETQLDATRARLRALEGQLAAEQAERERAEAQLEEAV 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 530 SALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLsgr 609
Cdd:pfam19220 237 EAHRAERASLRMKLEALTARAAATEQLLAEARNQLRDRDEAIRAAERRLKEASIERDTLERRLAGLEADLERRTQQF--- 313
|
330 340
....*....|....*....|....*..
gi 2217272553 610 eQELEQARREAQRQVEALERAAREKEA 636
Cdd:pfam19220 314 -QEMQRARAELEERAEMLTKALAAKDA 339
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
366-794 |
6.06e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.84 E-value: 6.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 366 REKSNLAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQE--DAVQDGARVRRELERSHRQLEQLEGKRsvlaK 443
Cdd:COG4717 81 KEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQllPLYQELEALEAELAELPERLEELEERL----E 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 444 ELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVE-LELSMTKLRAEEASLQDSLSKLSALNESLAQDkldlnrlV 522
Cdd:COG4717 157 ELRELEEELEELEAELAELQEELEELLEQLSLATEEELQdLAEELEELQQRLAELEEELEEAQEELEELEEE-------L 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 523 AQLEEEKSALQGRQRQAEQEAT-VAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQ 601
Cdd:COG4717 230 EQLENELEAAALEERLKEARLLlLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQA 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 602 LSRQLSGREQELEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQR 681
Cdd:COG4717 310 LPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRA 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 682 QLAQLEARREQLEAegqaLLLAKETLTGELAGLRQQIIATQEKASLDKELMAQKLVQAEREAQASLREQRAAHEEDLQRL 761
Cdd:COG4717 390 ALEQAEEYQELKEE----LEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQL 465
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 2217272553 762 Q-------------------REKEAAWRELEAERAQLQSQLQREQEELLARL 794
Cdd:COG4717 466 EedgelaellqeleelkaelRELAEEWAALKLALELLEEAREEYREERLPPV 517
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
2-445 |
7.28e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 48.01 E-value: 7.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 2 LREQLDQAGSANQALSEDIRKVTNDWTRCRKELEHREAAWRREEESFNAYFSNEHSRLLLLWRQVVGFRRLVSEVKMFT- 80
Cdd:COG1196 321 LEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAa 400
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 81 --ERDLLQLGGELARTSRAVQEAGLGLSTGLRLAESRAEAALEKQALLQAQLEEQLRDKVLREKDLAQQQMQSDLDKADL 158
Cdd:COG1196 401 qlEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALA 480
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 159 SARVTELGLAVKRLEKQNLEKDQ----------VNKDLTEKLEALESLRLQEQAALETEDGEGLQQTLRDLAQAVLSDSE 228
Cdd:COG1196 481 ELLEELAEAAARLLLLLEAEADYegflegvkaaLLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAA 560
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 229 SGVQLSGSERTADASNGSLRGLSGQRTPSPPRRSSPgRGRSPRRGPSPACSDSSTLALIHSALHKRQLQVQDMRGRYEAS 308
Cdd:COG1196 561 AAIEYLKAAKAGRATFLPLDKIRARAALAAALARGA-IGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRA 639
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 309 QDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAEELRQE 388
Cdd:COG1196 640 VTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEE 719
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2217272553 389 REKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKEL 445
Cdd:COG1196 720 ELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREI 776
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
350-991 |
7.67e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 47.91 E-value: 7.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 350 AQREVQRLRSANELLSREKSNLAHSLQVAQQQ---AEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELER 426
Cdd:pfam12128 247 QQEFNTLESAELRLSHLHFGYKSDETLIASRQeerQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSELEA 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 427 SHRQLEQLEG----KRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVE--------LELSMTKLRAE- 493
Cdd:pfam12128 327 LEDQHGAFLDadieTAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEqnnrdiagIKDKLAKIREAr 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 494 ---EASLQDSLSKL-SALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQaeqeATVAREEQERLEELRLEQEVARQGLEG 569
Cdd:pfam12128 407 drqLAVAEDDLQALeSELREQLEAGKLEFNEEEYRLKSRLGELKLRLNQ----ATATPELLLQLENFDERIERAREEQEA 482
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 570 SLRVAEQAQEALEQqlptLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEALAKEHAGlavQLV 649
Cdd:pfam12128 483 ANAEVERLQSELRQ----ARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHFLRKEAPDWEQSIG---KVI 555
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 650 AAEREGRT--------------LSEEATRLRLEKEALEGSLFEVQrqlaQLEARREQLEAEGQALLLAKETLTGELAGLR 715
Cdd:pfam12128 556 SPELLHRTdldpevwdgsvggeLNLYGVKLDLKRIDVPEWAASEE----ELRERLDKAEEALQSAREKQAAAEEQLVQAN 631
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 716 QQIiatqEKASLDKELMAQKLVQAEREAQASLREQRA---AHEEDLQRLQREKEAAWRELEAERAQLQSQLQREQEELLA 792
Cdd:pfam12128 632 GEL----EKASREETFARTALKNARLDLRRLFDEKQSekdKKNKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKE 707
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 793 RLEAEKEELSEEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLAT---ISLEMERQKRDAQSRQEQD 869
Cdd:pfam12128 708 QKREARTEKQAYWQVVEGALDAQLALLKAAIAARRSGAKAELKALETWYKRDLASLGVdpdVIAKLKREIRTLERKIERI 787
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 870 RSTVNALTSELRDLRAQREEAAAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRE 949
Cdd:pfam12128 788 AVRRQEVLRYFDWYQETWLQRRPRLATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRC 867
|
650 660 670 680
....*....|....*....|....*....|....*....|....
gi 2217272553 950 SQEG--REVQRQEAGELRRSLGEGAKEREALRRSNEELRSAVKK 991
Cdd:pfam12128 868 EMSKlaTLKEDANSEQAQGSIGERLAQLEDLKLKRDYLSESVKK 911
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1312-1551 |
8.72e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.07 E-value: 8.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1312 ATSRARQLQKAVAESEEARRSVDGRLSGVQAELALQEESVRRSERERRATLDQVATLERSLQATESELRASQEKISKMKA 1391
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1392 NETKLEGDKRRLKEVLdasESRTVKLELQRRSLEGELQRSRLGLSDREAQAQALQDRVDSLQRQVADSEVKAGTLQLTVE 1471
Cdd:COG4942 91 EIAELRAELEAQKEEL---AELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRA 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1472 RLNGALAKVEESEGALRDKVRGLTEALAQSSASLNSTRDKNLHLQKALTACEHDRQVLQERLDAARQALSEARKQSSSLG 1551
Cdd:COG4942 168 ELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAG 247
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
309-1057 |
1.03e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 47.48 E-value: 1.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 309 QDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAEELRQE 388
Cdd:pfam01576 221 QEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEE 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 389 REKLQ----------AAQEELRRQRDRLEEEQEDAVQDGARVR------------RELERSHRQLEQ------------- 433
Cdd:pfam01576 301 LEALKteledtldttAAQQELRSKREQEVTELKKALEEETRSHeaqlqemrqkhtQALEELTEQLEQakrnkanlekakq 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 434 -LEGKRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLA 512
Cdd:pfam01576 381 aLESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLS 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 513 QDkldLNRLVAQLEEEKSALQGRQRQAEQEATvareeqerleeLRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHER 592
Cdd:pfam01576 461 KD---VSSLESQLQDTQELLQEETRQKLNLST-----------RLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQL 526
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 593 SQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEAL 672
Cdd:pfam01576 527 SDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLEKKQKKF 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 673 EGSLFEVQRQLAQLEARREQLEAEgqalllAKETLTGELAGLRQQIIATQEKASLDKelmAQKLVQAEREAQASlreqra 752
Cdd:pfam01576 607 DQMLAEEKAISARYAEERDRAEAE------AREKETRALSLARALEEALEAKEELER---TNKQLRAEMEDLVS------ 671
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 753 aHEEDLQRLQREKEAAWRELEAERAQLQSQLQREQEELlarleaekeelseeiaalqQERDEGLLLAESEKQQALSLKES 832
Cdd:pfam01576 672 -SKDDVGKNVHELERSKRALEQQVEEMKTQLEELEDEL-------------------QATEDAKLRLEVNMQALKAQFER 731
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 833 EKTALSEKLMGTRHSLATISLEMERQKRDAQSRQEQDRSTVNALTSELRDLRAQREEAAAAHAQEV---RRLQEQARDLG 909
Cdd:pfam01576 732 DLQARDEQGEEKRRQLVKQVRELEAELEDERKQRAQAVAAKKKLELDLKELEAQIDAANKGREEAVkqlKKLQAQMKDLQ 811
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 910 KQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREALRRSNEELRSAV 989
Cdd:pfam01576 812 RELEEARASRDEILAQSKESEKKLKNLEAELLQLQEDLAASERARRQAQQERDELADEIASGASGKSALQDEKRRLEARI 891
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217272553 990 KKAESERISLKLANEDKEQKLALLEEARTAVGKEAGELRTGLQEVERSRLEARRELQELRRQMKMLDS 1057
Cdd:pfam01576 892 AQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAERSTSQKSESARQQLERQNKELKAKLQEMEG 959
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
118-718 |
1.04e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 47.27 E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 118 AALEKQALLQAQLEEQLRDKVLREKDLAQQQMQSDLDKADLSARVTELGLAVKRLEKQNLEKDQVNK--DLTEKLEALES 195
Cdd:TIGR00618 225 EKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKaaPLAAHIKAVTQ 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 196 LRLQEQAAL-ETEDGEGLQQTLRDLAQAVLSDSESGVQLSGSERTADASNGSLRGLSGQRTpspPRRSSPGRGRSPRRGP 274
Cdd:TIGR00618 305 IEQQAQRIHtELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVAT---SIREISCQQHTLTQHI 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 275 SPACSDSSTLALIHSALHKRQLQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREV 354
Cdd:TIGR00618 382 HTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHL 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 355 QRLRSAnellSREKSNLAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGArvrrELERSHRQLEQL 434
Cdd:TIGR00618 462 QESAQS----LKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDID----NPGPLTRRMQRG 533
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 435 EGKRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLA-- 512
Cdd:TIGR00618 534 EQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLAce 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 513 QDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQ-------- 584
Cdd:TIGR00618 614 QHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMqsekeqlt 693
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 585 --LPTLRHERSQLQEQLA----------QLSRQLSGREQELEQARREAQRQVEALERAAREK-EALAKEHAGLAVQLVAA 651
Cdd:TIGR00618 694 ywKEMLAQCQTLLRELEThieeydrefnEIENASSSLGSDLAAREDALNQSLKELMHQARTVlKARTEAHFNNNEEVTAA 773
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217272553 652 EREGRTLSEEATRLRLEKEALEgslfEVQRQLAQLEAR-REQLEAEGQALLLAKETLTGELAGLRQQI 718
Cdd:TIGR00618 774 LQTGAELSHLAAEIQFFNRLRE----EDTHLLKTLEAEiGQEIPSDEDILNLQCETLVQEEEQFLSRL 837
|
|
| CHASE3 |
COG5278 |
Extracytoplasmic sensor domain CHASE3 (specificity unknown) [Signal transduction mechanisms]; |
383-838 |
1.10e-04 |
|
Extracytoplasmic sensor domain CHASE3 (specificity unknown) [Signal transduction mechanisms];
Pssm-ID: 444089 [Multi-domain] Cd Length: 530 Bit Score: 46.82 E-value: 1.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 383 EELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVevreALSRATLQRDML 462
Cdd:COG5278 79 EPYEEARAEIDELLAELRSLTADNPEQQARLDELEALIDQWLAELEQVIALRRAGGLEAALALV----RSGEGKALMDEI 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 463 QAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQE 542
Cdd:COG5278 155 RARLLLLALALAALLLAAAALLLLLLALAALLALAELLLLALARALAALLLLLLLEAELAAAAALLAAAAALAALAALEL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 543 ATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQR 622
Cdd:COG5278 235 LAALALALALLLAALLLALLAALALAALLAAALLALAALLLALAAAAALAAAAALELAAAEALALAELELELLLAAAAAA 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 623 QVEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQALLL 702
Cdd:COG5278 315 AAAAAAAAAALAALLALALATALAAAAAALALLAALLAEAAAAAAEEAEAAAEAAAAALAGLAEVEAEGAAEAVELEVLA 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 703 AKETLTGELAGLRQQIIATQEKASLDKELMAQKLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEAERAQLQSQ 782
Cdd:COG5278 395 IAAAAAAAAAEAAAAAAAAAAASAAEALELAEALAEALALAEEEALALAAASSELAEAGAALALAAAEALAEELAAVAAL 474
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 2217272553 783 LQREQEELLARLEAEKEELSEEIAALQQERDEGLLLAESEKQQALSLKESEKTALS 838
Cdd:COG5278 475 AALAAAAAALAEAEAAAALAAAAALSLALALAALLLAAAEAALAAALAAALASAEL 530
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
898-1460 |
1.22e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.22 E-value: 1.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 898 VRRLQEQARDLGKQRDSClREAEELRTQLRLLEDARDGLRreLLEAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREA 977
Cdd:COG4913 244 LEDAREQIELLEPIRELA-ERYAAARERLAELEYLRAALR--LWFAQRRLELLEAELEELRAELARLEAELERLEARLDA 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 978 LRRSNEELRSAVKKAESERI-SLKLANEDKEQKLALLEEARTAVGKEAGELR----TGLQEVERSRLEARRELQELRRQM 1052
Cdd:COG4913 321 LREELDELEAQIRGNGGDRLeQLEREIERLERELEERERRRARLEALLAALGlplpASAEEFAALRAEAAALLEALEEEL 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1053 KMLDSENTRLGRELAELQGRLA--LGERAEKESRRETLGLRQRLLKGE--ASLEVMRQELQVAQRKLQEQEGE------- 1121
Cdd:COG4913 401 EALEEALAEAEAALRDLRRELRelEAEIASLERRKSNIPARLLALRDAlaEALGLDEAELPFVGELIEVRPEEerwrgai 480
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1122 ------FRTR-------ERRLLGSLEEARGTEKQQLDHARGLELKLEAARAEAAELGLRLSAAEGRAQG-LEAELA-RVE 1186
Cdd:COG4913 481 ervlggFALTllvppehYAAALRWVNRLHLRGRLVYERVRTGLPDPERPRLDPDSLAGKLDFKPHPFRAwLEAELGrRFD 560
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1187 VQRRAAEAQLGGLRSAL-RRGLG--------LGRAPSPAPRPVPGSPARDApaegsgeglnspstlecspgsqppspgpa 1257
Cdd:COG4913 561 YVCVDSPEELRRHPRAItRAGQVkgngtrheKDDRRRIRSRYVLGFDNRAK----------------------------- 611
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1258 tspaspdldpeavrgaLREFLQELRSAQRERDELRTQTSALNRQLAEMEAERdsatsRARQLQKAVAESEEARRSVDGRL 1337
Cdd:COG4913 612 ----------------LAALEAELAELEEELAEAEERLEALEAELDALQERR-----EALQRLAEYSWDEIDVASAEREI 670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1338 SGVQAELAlqeesvrrserERRATLDQVATLERSLQATESELRASQEKISKMKANETKLEGDKRRLKEVLDASESR---T 1414
Cdd:COG4913 671 AELEAELE-----------RLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRleaA 739
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 2217272553 1415 VKLELQRRSLEGELQRSRLGLSDREAQ-AQALQDRVDSLQRQVADSE 1460
Cdd:COG4913 740 EDLARLELRALLEERFAAALGDAVERElRENLEERIDALRARLNRAE 786
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
612-1127 |
1.23e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 46.98 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 612 ELEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEeatrlrlEKEALEGSLFEVQRQLAQLEARRE 691
Cdd:PRK03918 211 EISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEE-------KIRELEERIEELKKEIEELEEKVK 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 692 QLEAegqalLLAKETLTGELAGLRQQIiaTQEKASLDKELmaqklvqaereaqASLREQRAAHEEDLQRLQrEKEAAWRE 771
Cdd:PRK03918 284 ELKE-----LKEKAEEYIKLSEFYEEY--LDELREIEKRL-------------SRLEEEINGIEERIKELE-EKEERLEE 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 772 LEAERAQLQSQLQREQE-----ELLARLEAEKEELSEEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRH 846
Cdd:PRK03918 343 LKKKLKELEKRLEELEErhelyEEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIK 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 847 SLATISLEMERQKRD-----AQSRQEQDRSTVNALTSELRDLRAQREEAAAAHAQEVRRLQEQARDLGKQRDscLREAEE 921
Cdd:PRK03918 423 ELKKAIEELKKAKGKcpvcgRELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESE--LIKLKE 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 922 LRTQLRLLEDARDGLRRELLEaqRKLRESQEGREVQRQEAGELrRSLGEGAKEREALRRSNEELRSAVKKAESERISLK- 1000
Cdd:PRK03918 501 LAEQLKELEEKLKKYNLEELE--KKAEEYEKLKEKLIKLKGEI-KSLKKELEKLEELKKKLAELEKKLDELEEELAELLk 577
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1001 -------LANEDKEQKLALLEEARtavgKEAGELRTGLQEVERSRLEARRELQELRRQMKMLDSENTRLGR---ELAELQ 1070
Cdd:PRK03918 578 eleelgfESVEELEERLKELEPFY----NEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEElrkELEELE 653
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 2217272553 1071 GRLAlgERAEKESRRETLGLRQRLLKGEASLEVMRQELQVAQRKLQEQEGEFRTRER 1127
Cdd:PRK03918 654 KKYS--EEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREK 708
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
274-513 |
1.29e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.30 E-value: 1.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 274 PSPACSDSSTLALIHSALHKRQLQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQRE 353
Cdd:COG4942 12 ALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKE 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 354 VQRLRSAnelLSREKSNLAHSLQVAQQQAeelRQEREKLQAAQEELRRQRDRLEEEQEDAVQDgarvRRELERSHRQLEQ 433
Cdd:COG4942 92 IAELRAE---LEAQKEELAELLRALYRLG---RQPPLALLLSPEDFLDAVRRLQYLKYLAPAR----REQAEELRADLAE 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 434 LEGKRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQ 513
Cdd:COG4942 162 LAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAE 241
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
323-640 |
1.29e-04 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 46.81 E-value: 1.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 323 ESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAEELRQEREKLQAAQEELRRQ 402
Cdd:pfam07888 72 ERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSEELSEEKDALLAQRAAHEARIRELEEDIKTLTQRVLERETE 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 403 RDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVE 482
Cdd:pfam07888 152 LERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRKEAE 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 483 LELSMTKLRAEEASLQDSLSKLSALNESLAQdkLDLNRLVAQLEEEKSALQGRQRQAeQEATVAREEQERLEELRLEQEV 562
Cdd:pfam07888 232 NEALLEELRSLQERLNASERKVEGLGEELSS--MAAQRDRTQAELHQARLQAAQLTL-QLADASLALREGRARWAQERET 308
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217272553 563 ARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEALAKE 640
Cdd:pfam07888 309 LQQSAEADKDRIEKLSAELQRLEERLQEERMEREKLEVELGREKDCNRVQLSESRRELQELKASLRVAQKEKEQLQAE 386
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
574-869 |
1.45e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 46.05 E-value: 1.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 574 AEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAER 653
Cdd:COG4372 29 LSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 654 EGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQALLLAKETLTGELAGLRQQIIATQEKASLDKELMA 733
Cdd:COG4372 109 EAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDEL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 734 QKLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEAERAQLQSQLQREQEELLARLEAEKEELSEEIAALQQERD 813
Cdd:COG4372 189 LKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAIL 268
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 2217272553 814 EGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLATISLEMERQKRDAQSRQEQD 869
Cdd:COG4372 269 VEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLEL 324
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1268-1757 |
1.64e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 46.76 E-value: 1.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1268 EAVRGALREFLQELRSAQRE----RDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEEARRSvdgRLSGVQAE 1343
Cdd:pfam12128 279 EERQETSAELNQLLRTLDDQwkekRDELNGELSAADAAVAKDRSELEALEDQHGAFLDADIETAAADQE---QLPSWQSE 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1344 LALQEESVRRSERERRatlDQVATLERSLQATESELRASQEKISKMKANETklEGDKRRLKEVLDASESRTVKLELQRRS 1423
Cdd:pfam12128 356 LENLEERLKALTGKHQ---DVTAKYNRRRSKIKEQNNRDIAGIKDKLAKIR--EARDRQLAVAEDDLQALESELREQLEA 430
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1424 LEGELQRSRLGLSDREAQAQALQDRVDSLQRQVADSEVKagtlqltVERLNGALAKVEESEGALRDKVRGLTEALAQSSA 1503
Cdd:pfam12128 431 GKLEFNEEEYRLKSRLGELKLRLNQATATPELLLQLENF-------DERIERAREEQEAANAEVERLQSELRQARKRRDQ 503
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1504 SLNSTRDKNLHLQKALTACEHdrqvLQERLDAARQAL-----SEARKQSSSLGEQVQT-------LRGEVAD-------- 1563
Cdd:pfam12128 504 ASEALRQASRRLEERQSALDE----LELQLFPQAGTLlhflrKEAPDWEQSIGKVISPellhrtdLDPEVWDgsvggeln 579
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1564 -----LELQRVEAEGQLQQLREVLRQRQEGEAAalntvqkLQDERRLLQERLGSLQRALAQLEAEKREVERSALRLEKDR 1638
Cdd:pfam12128 580 lygvkLDLKRIDVPEWAASEEELRERLDKAEEA-------LQSAREKQAAAEEQLVQANGELEKASREETFARTALKNAR 652
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1639 VALRRTLDKVEREKLRSHEDTVRlsaekgrldrtltgaelELAEAQRQIQQLEAQVVVLEQSHSPAQLEVD-----AQQQ 1713
Cdd:pfam12128 653 LDLRRLFDEKQSEKDKKNKALAE-----------------RKDSANERLNSLEAQLKQLDKKHQAWLEEQKeqkreARTE 715
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 2217272553 1714 QLELQQEVERLRSAQ-AQTERTLEARERAHRQRVSTLKGQLQQEL 1757
Cdd:pfam12128 716 KQAYWQVVEGALDAQlALLKAAIAARRSGAKAELKALETWYKRDL 760
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
463-994 |
1.93e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 46.57 E-value: 1.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 463 QAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQE 542
Cdd:PRK02224 198 EKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEIEDLRETIAETEREREEL 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 543 ATVAREEQERLEELRLeqevARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAqr 622
Cdd:PRK02224 278 AEEVRDLRERLEELEE----ERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDA-- 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 623 qvEALERAAREKEALAKEhagLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEgqalll 702
Cdd:PRK02224 352 --DDLEERAEELREEAAE---LESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREE------ 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 703 aKETLTGELAGLRQQIIATQEKASLDKELMA--------QKLVQAER-EAQASLREQRAAHEEDLQRLQREKEAawRELE 773
Cdd:PRK02224 421 -RDELREREAELEATLRTARERVEEAEALLEagkcpecgQPVEGSPHvETIEEDRERVEELEAELEDLEEEVEE--VEER 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 774 AERAQLQSQLQREQEELLARleaekeelSEEIAALQQERDEGLllaeSEKQQALSLKESEKTALSEKLMGTRHSLATISL 853
Cdd:PRK02224 498 LERAEDLVEAEDRIERLEER--------REDLEELIAERRETI----EEKRERAEELRERAAELEAEAEEKREAAAEAEE 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 854 EMERqKRDAQSRQEQDRSTVNALTSELRDLrAQREEAAAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDAR 933
Cdd:PRK02224 566 EAEE-AREEVAELNSKLAELKERIESLERI-RTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEF 643
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2217272553 934 DGLRRELLEAQR------------KLRESQEGREVQRQEAGELRRSLgegaKEREALRRSNEELRSAVKKAES 994
Cdd:PRK02224 644 DEARIEEAREDKeraeeyleqveeKLDELREERDDLQAEIGAVENEL----EELEELRERREALENRVEALEA 712
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
660-786 |
2.18e-04 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 46.23 E-value: 2.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 660 EEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQALLLAKetltgeLAGLRQQIIATQEKASldkELMAQklVQA 739
Cdd:COG0542 397 EAAARVRMEIDSKPEELDELERRLEQLEIEKEALKKEQDEASFER------LAELRDELAELEEELE---ALKAR--WEA 465
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 2217272553 740 EREAQASLREQRAAHEEDLQRLQrEKEAAWRELEAERAQLQSQLQRE 786
Cdd:COG0542 466 EKELIEEIQELKEELEQRYGKIP-ELEKELAELEEELAELAPLLREE 511
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
451-794 |
2.27e-04 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 46.20 E-value: 2.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 451 ALSRATLQRDMLQAE------KAEVAEALTKAEAGRVELELSMTKLRAEEASLqDSLSKLSA------LNESLAQDKLDL 518
Cdd:PRK10929 22 APDEKQITQELEQAKaaktpaQAEIVEALQSALNWLEERKGSLERAKQYQQVI-DNFPKLSAelrqqlNNERDEPRSVPP 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 519 NRLVAQLEEE----KSALQGRQRQAEQEATVAREEQERLEELRLEQEVAR----------QGLEGSLRVAEQAQEALEQQ 584
Cdd:PRK10929 101 NMSTDALEQEilqvSSQLLEKSRQAQQEQDRAREISDSLSQLPQQQTEARrqlneierrlQTLGTPNTPLAQAQLTALQA 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 585 LPTLRheRSQLQE-QLAQLS---RQ-LSGREQELEQARRE--------------AQRQVEAlERAAREKEALAKEHAGLA 645
Cdd:PRK10929 181 ESAAL--KALVDElELAQLSannRQeLARLRSELAKKRSQqldaylqalrnqlnSQRQREA-ERALESTELLAEQSGDLP 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 646 VQLVAAEREGRTLSEEatrlrLEKEALEGSLF-EVQRQLAQ--LEARREQLEAEGQALLLAKETLTGElaGLRQQIIATQ 722
Cdd:PRK10929 258 KSIVAQFKINRELSQA-----LNQQAQRMDLIaSQQRQAASqtLQVRQALNTLREQSQWLGVSNALGE--ALRAQVARLP 330
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217272553 723 EKAsldkelmaqKLVQAEREaQASLREQRAAHEEDLQRLQRE---KEAAWRELEAERAQLQSQLQREQEELLARL 794
Cdd:PRK10929 331 EMP---------KPQQLDTE-MAQLRVQRLRYEDLLNKQPQLrqiRQADGQPLTAEQNRILDAQLRTQRELLNSL 395
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1362-1699 |
2.48e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 46.10 E-value: 2.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1362 LDQVATLERSLQATESELRASQEKISKM-------KANETKLEGD-------------KRRLKEVLDASESRTVKLELQR 1421
Cdd:PRK04863 285 LEEALELRRELYTSRRQLAAEQYRLVEMarelaelNEAESDLEQDyqaasdhlnlvqtALRQQEKIERYQADLEELEERL 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1422 RSLEGELQRSRLGLSDREAQAQALQDRVDSLQRQVAD-------SEVKAGTLQLTVERLNGA----------LAKVEESE 1484
Cdd:PRK04863 365 EEQNEVVEEADEQQEENEARAEAAEEEVDELKSQLADyqqaldvQQTRAIQYQQAVQALERAkqlcglpdltADNAEDWL 444
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1485 GALRDKVRGLTEALAQSSASLNSTRDKNLHLQKALT-----ACEHDRQVLQerlDAARQALSEARKQsSSLGEQVQTLRG 1559
Cdd:PRK04863 445 EEFQAKEQEATEELLSLEQKLSVAQAAHSQFEQAYQlvrkiAGEVSRSEAW---DVARELLRRLREQ-RHLAEQLQQLRM 520
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1560 EVADLElQRVEAEGQLQQLREVLRQRQEGEAAALNTVQKLQDERRLLQERLGSLQRALAQ----LEAEKREVERSALRLE 1635
Cdd:PRK04863 521 RLSELE-QRLRQQQRAERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARErrmaLRQQLEQLQARIQRLA 599
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2217272553 1636 KDRVALRRTLDKVERekLRSH-----EDTVRLSAEKGRLDRTLTGAELELAEAQRQIQQLEAQVVVLEQ 1699
Cdd:PRK04863 600 ARAPAWLAAQDALAR--LREQsgeefEDSQDVTEYMQQLLERERELTVERDELAARKQALDEEIERLSQ 666
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1264-1705 |
2.78e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 45.80 E-value: 2.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1264 DLDPEAVRGALREFLQELRSAQRERDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVA----ESEEARRSVDGRlSG 1339
Cdd:PRK02224 306 DADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAelesELEEAREAVEDR-RE 384
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1340 VQAELALQEESVRRSERERRATLDQVATLERSLQATESELRasqEKISKMKANETKLEGDKRRLKEVLDASESRTVKLEL 1419
Cdd:PRK02224 385 EIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELR---EREAELEATLRTARERVEEAEALLEAGKCPECGQPV 461
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1420 QRRSLEGELQRSRlglsdreaqaqalqDRVDSLQRQVADSEVKAGTLQLTVERLNgALAKVEESEGALRDKVRGLTEALA 1499
Cdd:PRK02224 462 EGSPHVETIEEDR--------------ERVEELEAELEDLEEEVEEVEERLERAE-DLVEAEDRIERLEERREDLEELIA 526
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1500 QSSASLNSTRDKNLHLQKALTACEHDRQVLQERLDAARQALSEARKQSSSLGEQVQTLrgevaDLELQRVEAEGQLQQLR 1579
Cdd:PRK02224 527 ERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAEL-----KERIESLERIRTLLAAI 601
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1580 EVLRQRQEGEAAALNTVQKLQDERRllqERLGSLQRALAQLEAEKREVERSALRLEKDRVAlrRTLDKVEREKLRSHEDT 1659
Cdd:PRK02224 602 ADAEDEIERLREKREALAELNDERR---ERLAEKRERKRELEAEFDEARIEEAREDKERAE--EYLEQVEEKLDELREER 676
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 2217272553 1660 VRLSAEKGRLDRTLTgaelELAEAQRQIQQLEAQVVVLEQSHSPAQ 1705
Cdd:PRK02224 677 DDLQAEIGAVENELE----ELEELRERREALENRVEALEALYDEAE 718
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
856-1074 |
3.04e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 3.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 856 ERQKRDAQSRQEQDRSTVNALTSELRDLRAQREEAAAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDG 935
Cdd:COG4942 26 EAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEE 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 936 LRRELLEAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEE 1015
Cdd:COG4942 106 LAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEE 185
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2217272553 1016 ARTAVGKEAGELRTGLQEVERSRLEARRELQELRRQMKMLDSENTRLGRELAELQGRLA 1074
Cdd:COG4942 186 ERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1530-1759 |
4.05e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 45.31 E-value: 4.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1530 QERLDAARQALSEARKQSSSLGEQV-QTLRGEVADLELQRVEAEGQLQQLREVLRQRQEGEAAAlntvQKLQDERRLLQE 1608
Cdd:COG1196 185 EENLERLEDILGELERQLEPLERQAeKAERYRELKEELKELEAELLLLKLRELEAELEELEAEL----EELEAELEELEA 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1609 RLGSLQralAQLEAEKREVERSALRLE---KDRVALRRTLDKVEREKLRSHEDTVRLSAEKGRLDRTLTGAELELAEAQR 1685
Cdd:COG1196 261 ELAELE---AELEELRLELEELELELEeaqAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEE 337
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217272553 1686 QIQQLEAQVVVLEQSHSPAQLEVD----AQQQQLELQQEVERLRSAQAQTERTLEARERAHRQRVSTLKGQLQQELRR 1759
Cdd:COG1196 338 ELEELEEELEEAEEELEEAEAELAeaeeALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLER 415
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
290-542 |
5.36e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 45.06 E-value: 5.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 290 ALHKRQLQVQDMRGRYEASQdlLGTLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKS 369
Cdd:TIGR02169 773 DLHKLEEALNDLEARLSHSR--IPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIK 850
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 370 NLAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEqedavqdgarvRRELErshRQLEQLEGKRSVLAKELVEVR 449
Cdd:TIGR02169 851 SIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKE-----------RDELE---AQLRELERKIEELEAQIEKKR 916
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 450 EALSRATLQRDMLQAEKAEVaEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALN-------ESLAQDKLDLNRLV 522
Cdd:TIGR02169 917 KRLSELKAKLEALEEELSEI-EDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNmlaiqeyEEVLKRLDELKEKR 995
|
250 260
....*....|....*....|
gi 2217272553 523 AQLEEEKSALQGRQRQAEQE 542
Cdd:TIGR02169 996 AKLEEERKAILERIEEYEKK 1015
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1274-1613 |
5.37e-04 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 44.50 E-value: 5.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1274 LREFLQELRSAQRERDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEEARRSVDGRLSGVQAELALQEESVRR 1353
Cdd:pfam07888 47 LQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSEELSEEKDALLAQRAA 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1354 SERERRATLDQVATLERSLQATESELRASQEKISKMKANETKLEGDKRRLKEVLDASESrtvklelQRRSLEGELQRSRL 1433
Cdd:pfam07888 127 HEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEE-------ELRSLSKEFQELRN 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1434 GLSDREAQAQALQDRVDSL-------QRQVADSEVKAGTLQLTVERLNGALAKVE------ESEGALRDKVRG-LTEALA 1499
Cdd:pfam07888 200 SLAQRDTQVLQLQDTITTLtqklttaHRKEAENEALLEELRSLQERLNASERKVEglgeelSSMAAQRDRTQAeLHQARL 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1500 QSSASLNSTRDKNLHLQKALTACEHDRQVLQERLDAARQALSEARKQSSSLGEQVQTLRGEVADLE-----------LQR 1568
Cdd:pfam07888 280 QAAQLTLQLADASLALREGRARWAQERETLQQSAEADKDRIEKLSAELQRLEERLQEERMEREKLEvelgrekdcnrVQL 359
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 2217272553 1569 VEAEGQLQQLREVLRQRQEGEAAALNTVQKLQDERRLLQERLGSL 1613
Cdd:pfam07888 360 SESRRELQELKASLRVAQKEKEQLQAEKQELLEYIRQLEQRLETV 404
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
722-1061 |
6.01e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 44.73 E-value: 6.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 722 QEKASLDKEL-MAQKLVQAEREAQASLREQRAAHEEdlqrlqREKEAAWRELEAERAQLQSQlQREQEELlarleaekee 800
Cdd:pfam17380 303 QEKEEKAREVeRRRKLEEAEKARQAEMDRQAAIYAE------QERMAMERERELERIRQEER-KRELERI---------- 365
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 801 lseeiaalqqerdeglllaeseKQQALSLKESEKTALSEklmgtrhslatisLEMERQKRDAQSRQEQDRSTVNALTSEL 880
Cdd:pfam17380 366 ----------------------RQEEIAMEISRMRELER-------------LQMERQQKNERVRQELEAARKVKILEEE 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 881 RdlrAQREEAAAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLR-RELLEAQRKLRESQEGREVQRQ 959
Cdd:pfam17380 411 R---QRKIQQQKVEMEQIRAEQEEARQREVRRLEEERAREMERVRLEEQERQQQVERlRQQEEERKRKKLELEKEKRDRK 487
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 960 EAGELRRSLGEgaKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARTAvgKEAGELRTGLQEV----- 1034
Cdd:pfam17380 488 RAEEQRRKILE--KELEERKQAMIEEERKRKLLEKEMEERQKAIYEEERRREAEEERRKQ--QEMEERRRIQEQMrkate 563
|
330 340
....*....|....*....|....*..
gi 2217272553 1035 ERSRLEARRELQELRRQMKmlDSENTR 1061
Cdd:pfam17380 564 ERSRLEAMEREREMMRQIV--ESEKAR 588
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
1535-1708 |
6.20e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 44.46 E-value: 6.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1535 AARQALSEARKQSSSLGEQVQTLRGEVADLELQRVEAEGQLQQLREVL---RQRQEGEAAALNTVQKLQDERRLLQERLG 1611
Cdd:COG2433 403 HEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERIERLERELseaRSEERREIRKDREISRLDREIERLERELE 482
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1612 SLQRALAQLEAEKREVERSALRLEKDRVALRRTLDKVEREKLRSHEDTVRLSAEKGRLDRTLTGAELELAEaqrQIQQLE 1691
Cdd:COG2433 483 EERERIEELKRKLERLKELWKLEHSGELVPVKVVEKFTKEAIRRLEEEYGLKEGDVVYLRDASGAGRSTAE---LLAEAG 559
|
170
....*....|....*..
gi 2217272553 1692 AQVVVLEQSHSPAQLEV 1708
Cdd:COG2433 560 PRAVIVPGELSEAADEV 576
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1407-1645 |
6.29e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.91 E-value: 6.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1407 LDASESRTVKLELQRRSLEG--ELQRSRLGLSDREAQAQAL---------QDRVDSLQRQVADsevkagtLQLTVERLNG 1475
Cdd:COG4913 237 LERAHEALEDAREQIELLEPirELAERYAAARERLAELEYLraalrlwfaQRRLELLEAELEE-------LRAELARLEA 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1476 ALAKVEESEGALRDKVRGLTEALAQSSAslnstrdknlhlqKALTACEHDRQVLQERLDAARQALSEARKQssslgeqvq 1555
Cdd:COG4913 310 ELERLEARLDALREELDELEAQIRGNGG-------------DRLEQLEREIERLERELEERERRRARLEAL--------- 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1556 tlrgeVADLELQRVEAEGQLQQLREVLRQRQEGEAAALntvQKLQDERRLLQERLGSLQRALAQLEAEKREVERSALRLE 1635
Cdd:COG4913 368 -----LAALGLPLPASAEEFAALRAEAAALLEALEEEL---EALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIP 439
|
250
....*....|
gi 2217272553 1636 KDRVALRRTL 1645
Cdd:COG4913 440 ARLLALRDAL 449
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1277-1749 |
6.45e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.37 E-value: 6.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1277 FLQELRSAQRERDELRTQtsalNRQLAEMEAERDSATSRARQLQKAVAESEEARRsvdgrlsgvQAELALQEESVRRSER 1356
Cdd:COG4717 69 NLKELKELEEELKEAEEK----EEEYAELQEELEELEEELEELEAELEELREELE---------KLEKLLQLLPLYQELE 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1357 ERRATLDQVATLERSLQATESELRASQEKISKMKANETKLEGDKRRLKEVLDASESRTVK-LELQRRSLEGELQRSRLGL 1435
Cdd:COG4717 136 ALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQdLAEELEELQQRLAELEEEL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1436 SDREAQAQALQDRVDSLQRQVADSEVKAGTLQLTVERLNGALAKVEESEGALRDKVRGLTEALAQSSASLnstrdknlhL 1515
Cdd:COG4717 216 EEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGL---------L 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1516 QKALTACEHDRQVLQERLDAARQALSEARKQSSSLGEQVQTLRGEVADLELQRVEAEGQLQQLREVLRQRQEGEAAALnt 1595
Cdd:COG4717 287 ALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQ-- 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1596 VQKLQDERRLLQERLGSLQRALAQLEAEKREvERSALRLEKDRVALRRTLDKVEREKLRSHEDTVRLSAEKGRLDRTLTG 1675
Cdd:COG4717 365 LEELEQEIAALLAEAGVEDEEELRAALEQAE-EYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEE 443
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2217272553 1676 AELELAEAQRQIQQLEAQVVVLEQSHSPAQLEVDAQQQQLELQQEVERLRSAQAQTERTLEARERAHRQRVSTL 1749
Cdd:COG4717 444 LEEELEELREELAELEAELEQLEEDGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREERLPPV 517
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
284-472 |
6.99e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.98 E-value: 6.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 284 LALIHSALHKRQLQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLR----- 358
Cdd:COG4942 29 LEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKeelae 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 359 ------------SANELLSREKSN--------LAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGA 418
Cdd:COG4942 109 llralyrlgrqpPLALLLSPEDFLdavrrlqyLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEERA 188
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 2217272553 419 RVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEA 472
Cdd:COG4942 189 ALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
290-717 |
7.02e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.37 E-value: 7.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 290 ALHKRQLQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANEllsREKS 369
Cdd:COG4717 119 EKLEKLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATE---EELQ 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 370 NLAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDgarvrrelershRQLEQLEGKRSVLAKELVEVR 449
Cdd:COG4717 196 DLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALE------------ERLKEARLLLLIAAALLALLG 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 450 EALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEK 529
Cdd:COG4717 264 LGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 530 SALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQlptlrhersQLQEQLAQLSRQLSGR 609
Cdd:COG4717 344 DRIEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQ---------ELKEELEELEEQLEEL 414
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 610 EQELEQarreaqrqvealERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALE--GSLFEVQRQLAQLE 687
Cdd:COG4717 415 LGELEE------------LLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEedGELAELLQELEELK 482
|
410 420 430
....*....|....*....|....*....|
gi 2217272553 688 ARREQLEAEGQALLLAKETLTGELAGLRQQ 717
Cdd:COG4717 483 AELRELAEEWAALKLALELLEEAREEYREE 512
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
579-1053 |
7.43e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 44.24 E-value: 7.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 579 EALEQQLPTLRHERSQLQEQLAQLSRQLSGRE------QELEQARREAQRQVEALERA----AREKEALAKEHAGLAVQL 648
Cdd:TIGR04523 169 EELENELNLLEKEKLNIQKNIDKIKNKLLKLElllsnlKKKIQKNKSLESQISELKKQnnqlKDNIEKKQQEINEKTTEI 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 649 VAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQALLLAKE-----TLTGELAGLRQQIIATQE 723
Cdd:TIGR04523 249 SNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEqdwnkELKSELKNQEKKLEEIQN 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 724 KASLDKELMAQ---KLVQAEREAQ------ASLREQRAAHEEDLQRLQREKEAAWRE---LEAERAQLQSQLQrEQEELL 791
Cdd:TIGR04523 329 QISQNNKIISQlneQISQLKKELTnsesenSEKQRELEEKQNEIEKLKKENQSYKQEiknLESQINDLESKIQ-NQEKLN 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 792 ARLEAEKEELSEEIAALQQERDEglLLAESEKQQA----LSLKESEKTALSEKLMGTRHSLATISLEMERQKRDAQSRQE 867
Cdd:TIGR04523 408 QQKDEQIKKLQQEKELLEKEIER--LKETIIKNNSeikdLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLE 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 868 QDRSTVNALTSELRDLRAQreeaaaahaqeVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKL 947
Cdd:TIGR04523 486 QKQKELKSKEKELKKLNEE-----------KKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFEL 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 948 RESQEGREVQrqeagELRRSLGEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARTAVGKEAGEL 1027
Cdd:TIGR04523 555 KKENLEKEID-----EKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKL 629
|
490 500
....*....|....*....|....*.
gi 2217272553 1028 RTGLQEVERSRLEARRELQELRRQMK 1053
Cdd:TIGR04523 630 SSIIKNIKSKKNKLKQEVKQIKETIK 655
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
593-835 |
7.76e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 44.15 E-value: 7.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 593 SQLQE----QLAQLSRQLSGreQELEQARREAQRQVEALE--RAAREKEALAKEhaglavqlVAAEREGRTLSEEATRLR 666
Cdd:PRK05771 23 EALHElgvvHIEDLKEELSN--ERLRKLRSLLTKLSEALDklRSYLPKLNPLRE--------EKKKVSVKSLEELIKDVE 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 667 LEKEALEGSLFEVQRQLAQLEARREQLEAEGQAL------------LLAKETLTGELAGL------RQQIIATQEKASLD 728
Cdd:PRK05771 93 EELEKIEKEIKELEEEISELENEIKELEQEIERLepwgnfdldlslLLGFKYVSVFVGTVpedkleELKLESDVENVEYI 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 729 KELMAQK--LVQAEREAQASLREQRAAHEEDLQRLQREKEAAwRELEAERAQLqSQLQREQEELLARLEAEKEELSEEIA 806
Cdd:PRK05771 173 STDKGYVyvVVVVLKELSDEVEEELKKLGFERLELEEEGTPS-ELIREIKEEL-EEIEKERESLLEELKELAKKYLEELL 250
|
250 260 270
....*....|....*....|....*....|
gi 2217272553 807 ALqqerdEGLLLAESEKQQALS-LKESEKT 835
Cdd:PRK05771 251 AL-----YEYLEIELERAEALSkFLKTDKT 275
|
|
| MARTX_Nterm |
NF012221 |
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ... |
307-681 |
7.96e-04 |
|
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.
Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 44.44 E-value: 7.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 307 ASQDLLGTLRKQLSDSESERRALEEQlqrlrdktdgaMQAHEDAQRevqrlrsanelLSREKSNLAHSLQVAQQQAEELR 386
Cdd:NF012221 1539 ESSQQADAVSKHAKQDDAAQNALADK-----------ERAEADRQR-----------LEQEKQQQLAAISGSQSQLESTD 1596
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 387 QereklQAAQEELRRQRDRLEEEQEDavqdgarVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRATLQRdmlqaek 466
Cdd:NF012221 1597 Q-----NALETNGQAQRDAILEESRA-------VTKELTTLAQGLDALDSQATYAGESGDQWRNPFAGGLLDR------- 1657
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 467 aeVAEAL--TKAEAGrVELELSMTKLRAEEASLQDSLSKLSAlneslAQDKLDLNRLVAQLEEEKSALQGRQRQaeQEAT 544
Cdd:NF012221 1658 --VQEQLddAKKISG-KQLADAKQRHVDNQQKVKDAVAKSEA-----GVAQGEQNQANAEQDIDDAKADAEKRK--DDAL 1727
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 545 VAREEqerleelrleqevARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQlAQLSRQLSGREQEleqaRREAQRQV 624
Cdd:NF012221 1728 AKQNE-------------AQQAESDANAAANDAQSRGEQDASAAENKANQAQAD-AKGAKQDESDKPN----RQGAAGSG 1789
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2217272553 625 EALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEatrlrlEKEALEGSLFEVQR 681
Cdd:NF012221 1790 LSGKAYSVEGVAEPGSHINPDSPAAADGRFSEGLTEQ------EQEALEGATNAVNR 1840
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
405-793 |
8.13e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 44.56 E-value: 8.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 405 RLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEA-GRVEL 483
Cdd:PRK04863 276 RHANERRVHLEEALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLNLVQTALRQQEKiERYQA 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 484 ELSMTKLRAEEAS--LQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATvAREEQERLEELRLEQE 561
Cdd:PRK04863 356 DLEELEERLEEQNevVEEADEQQEENEARAEAAEEEVDELKSQLADYQQALDVQQTRAIQYQQ-AVQALERAKQLCGLPD 434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 562 VARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQ------EQLAQLSRQLSGreqelEQARREAQRQVEALERAAREKE 635
Cdd:PRK04863 435 LTADNAEDWLEEFQAKEQEATEELLSLEQKLSVAQaahsqfEQAYQLVRKIAG-----EVSRSEAWDVARELLRRLREQR 509
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 636 ALAKEHAGLAVQLVAAEREgrtLSEEATRLRLEKEALEGSLFEVQRQlAQLEARREQLEAEGQALLLAKETLTGELAGLR 715
Cdd:PRK04863 510 HLAEQLQQLRMRLSELEQR---LRQQQRAERLLAEFCKRLGKNLDDE-DELEQLQEELEARLESLSESVSEARERRMALR 585
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 716 QQIiatQEKASLDKELMAQKLV-QAEREAQASLREQRAAHEEDLQRL------QREKEAAWRELEAERAQLQSQLQREQE 788
Cdd:PRK04863 586 QQL---EQLQARIQRLAARAPAwLAAQDALARLREQSGEEFEDSQDVteymqqLLERERELTVERDELAARKQALDEEIE 662
|
....*
gi 2217272553 789 ELLAR 793
Cdd:PRK04863 663 RLSQP 667
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
291-773 |
8.93e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 44.28 E-value: 8.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 291 LHKRQLQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRdKTDGAMQAHEDAQREVQRLRSANELLSREKSN 370
Cdd:PRK03918 240 IEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELK-ELKEKAEEYIKLSEFYEEYLDELREIEKRLSR 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 371 LAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDA--VQDGARVRRELER-----SHRQLEQLEGKRSVLAK 443
Cdd:PRK03918 319 LEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHelYEEAKAKKEELERlkkrlTGLTPEKLEKELEELEK 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 444 ELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEE---------ASLQDSLSKLSALNESLAQD 514
Cdd:PRK03918 399 AKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHrkelleeytAELKRIEKELKEIEEKERKL 478
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 515 KLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQ------GLEGSLRVAE---QAQEALEQQL 585
Cdd:PRK03918 479 RKELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKlkekliKLKGEIKSLKkelEKLEELKKKL 558
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 586 PTLRHERSQLQEQLAQLSRQLsgreqeleqaRREAQRQVEALERAAREKEALAKEHaglaVQLVAAEREgrtLSEEATRL 665
Cdd:PRK03918 559 AELEKKLDELEEELAELLKEL----------EELGFESVEELEERLKELEPFYNEY----LELKDAEKE---LEREEKEL 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 666 RLEKEALEGSLFEVQRQLAQLEARREQLEAegqallLAKETLTGELAGLRqqiiatQEKASLDKELMAqklVQAEREAQA 745
Cdd:PRK03918 622 KKLEEELDKAFEELAETEKRLEELRKELEE------LEKKYSEEEYEELR------EEYLELSRELAG---LRAELEELE 686
|
490 500
....*....|....*....|....*...
gi 2217272553 746 SLREQRAAHEEDLQRLQREKEAAWRELE 773
Cdd:PRK03918 687 KRREEIKKTLEKLKEELEEREKAKKELE 714
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
490-807 |
1.02e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 43.35 E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 490 LRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQgleg 569
Cdd:COG4372 33 LRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQE---- 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 570 SLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEALAKEHA--GLAVQ 647
Cdd:COG4372 109 EAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAeqALDEL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 648 LVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQALLLAKETLTGELAGLRQQIIATQEKASL 727
Cdd:COG4372 189 LKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAIL 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 728 DKELMAQKLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEAERAQLQSQLQREQEELLARLEAEKEELSEEIAA 807
Cdd:COG4372 269 VEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLLV 348
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
831-1193 |
1.05e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 43.88 E-value: 1.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 831 ESEKTALSEKLMGTRHSLATISLEMER---QKRDAQSRQE-------------QDRSTVNALTSELRDLRAQREEAAAAH 894
Cdd:PRK02224 198 EKEEKDLHERLNGLESELAELDEEIERyeeQREQARETRDeadevleeheerrEELETLEAEIEDLRETIAETEREREEL 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 895 AQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLREsqegrevQRQEAGELRRSLGEGAKE 974
Cdd:PRK02224 278 AEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEE-------CRVAAQAHNEEAESLRED 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 975 REALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARTAVGKEAGELRTGLQEVERSRLEARRELQELRRQMKM 1054
Cdd:PRK02224 351 ADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAE 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1055 LDSENTRLGRELAELQGRLA------LGERAEKESRRETLG-LRQRLLKGEASLEVMRQELQVAQRKLQEQEgEFRTRER 1127
Cdd:PRK02224 431 LEATLRTARERVEEAEALLEagkcpeCGQPVEGSPHVETIEeDRERVEELEAELEDLEEEVEEVEERLERAE-DLVEAED 509
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2217272553 1128 RLLGSLEEARGTEKQQLDHARGLELKLEAARAEAAELG-LRLSAAEGRAQGLEAELARVEVQRRAAE 1193
Cdd:PRK02224 510 RIERLEERREDLEELIAERRETIEEKRERAEELRERAAeLEAEAEEKREAAAEAEEEAEEAREEVAE 576
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
346-1063 |
1.25e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 43.80 E-value: 1.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 346 AHEDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQedavqdgaRVRRELE 425
Cdd:TIGR00618 192 LHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQL--------KKQQLLK 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 426 RSHRQLEQLEGkrsvLAKELVEVREALSRATlQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLraeeaslqdslSKLS 505
Cdd:TIGR00618 264 QLRARIEELRA----QEAVLEETQERINRAR-KAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSR-----------AKLL 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 506 ALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEelrleqevarqgLEGSLRVAEQAQEALEQQL 585
Cdd:TIGR00618 328 MKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHT------------LTQHIHTLQQQKTTLTQKL 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 586 PTLRHERSQLQEQLAQLSRQLSgREQELEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRL 665
Cdd:TIGR00618 396 QSLCKELDILQREQATIDTRTS-AFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQ 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 666 RLEKEAL-----------EGSLFEVQRQLAQLEARREQLEAEGQALLLAKETLTGELAGLRQQIIATQEKASLDKELmaq 734
Cdd:TIGR00618 475 LQTKEQIhlqetrkkavvLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQL--- 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 735 klvQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEAERAQLQSQLQREQEELLARLEAEKEELSEEIAALQQERDE 814
Cdd:TIGR00618 552 ---TSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQ 628
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 815 GLLLAESEKQQALSLKESEKTALSEKLM--GTRHSLATISLEMERQKRDAQSRQEQDRSTVNALTSELRDL---RAQREE 889
Cdd:TIGR00618 629 DVRLHLQQCSQELALKLTALHALQLTLTqeRVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLaqcQTLLRE 708
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 890 AAAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREVQRQEAGELRRSLG 969
Cdd:TIGR00618 709 LETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQ 788
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 970 EGAKEREALRRSNEELRSAVK-KAESERISLKLANEDKEQKLALLEEARTAVGKEAGELRTGLQEVErsrlEARRELQEL 1048
Cdd:TIGR00618 789 FFNRLREEDTHLLKTLEAEIGqEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYE----ECSKQLAQL 864
|
730
....*....|....*
gi 2217272553 1049 RRQMKMLDSENTRLG 1063
Cdd:TIGR00618 865 TQEQAKIIQLSDKLN 879
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1478-1761 |
1.26e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 43.35 E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1478 AKVEESEGALRDKVRGLTEALAQSSASLNSTRDKNLHLQKALTACEHDRQVLQERLDAARQALSEARKQSSSLGEQVQTL 1557
Cdd:COG4372 6 EKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEEL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1558 RGEVADLELQRVEAEGQLQQLREVLRQRQEGEAAALNTVQKLQDERRLLQERLGSLQRALAQLEAEKREVERSALRLEKD 1637
Cdd:COG4372 86 NEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEE 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1638 RVALRRTLDKVEREKLRSHEDTVRLSAEKGRLDRTLTGAELELAEAQRQIQQLEAQVVVLEQSHSPAQLEVDAQQQQLEL 1717
Cdd:COG4372 166 LAALEQELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELE 245
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 2217272553 1718 QQEVERLRSAQAQTERTLEARERAHRQRVSTLKGQLQQELRRSS 1761
Cdd:COG4372 246 EDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALE 289
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
304-834 |
1.32e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.51 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 304 RYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGAmqahEDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAE 383
Cdd:PRK03918 187 RTENIEELIKEKEKELEEVLREINEISSELPELREELEKL----EKEVKELEELKEEIEELEKELESLEGSKRKLEEKIR 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 384 ELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGA--RVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRATLQRDM 461
Cdd:PRK03918 263 ELEERIEELKKEIEELEEKVKELKELKEKAEEYIKlsEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEE 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 462 LQAEKAEVAEALTKAEAGRVELElsmtKLRAEEASLQDSLSKLSALN-ESLAQDKLDLNRLVAQLEEEKSALQGRQRQAE 540
Cdd:PRK03918 343 LKKKLKELEKRLEELEERHELYE----EAKAKKEELERLKKRLTGLTpEKLEKELEELEKAKEEIEEEISKITARIGELK 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 541 QEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEqqLPTLRHERSQLQEQLAQLSRQLSGREQELEQARR-- 618
Cdd:PRK03918 419 KEIKELKKAIEELKKAKGKCPVCGRELTEEHRKELLEEYTAE--LKRIEKELKEIEEKERKLRKELRELEKVLKKESEli 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 619 ---EAQRQVEALERA-----AREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLrlekEALEGSLFEVQRQLAQLEARR 690
Cdd:PRK03918 497 klkELAEQLKELEEKlkkynLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKL----EELKKKLAELEKKLDELEEEL 572
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 691 EQLEAEGQALLLAK-ETLTGELAGLRQQIIATQEKASLDKELmaqklvQAEREAQASLREQRAAHEEDLQRLQREKEAAW 769
Cdd:PRK03918 573 AELLKELEELGFESvEELEERLKELEPFYNEYLELKDAEKEL------EREEKELKKLEEELDKAFEELAETEKRLEELR 646
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217272553 770 RELEAERAQLQSQLQREQEELLARLEAEKEELSEEIAALQQERDEGLLLAESEKQQALSLKESEK 834
Cdd:PRK03918 647 KELEELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKK 711
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
329-691 |
1.32e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 43.35 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 329 LEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEE 408
Cdd:pfam07888 36 LEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSEELSE 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 409 EQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMT 488
Cdd:pfam07888 116 EKDALLAQRAAHEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQ 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 489 KLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLE 568
Cdd:pfam07888 196 ELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRKEAENEALLEELRSLQERLNASERKVEGLGEELSSMAAQRDRTQAELH 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 569 GSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEA----LAKEHAGL 644
Cdd:pfam07888 276 QARLQAAQLTLQLADASLALREGRARWAQERETLQQSAEADKDRIEKLSAELQRLEERLQEERMEREKleveLGREKDCN 355
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 2217272553 645 AVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARRE 691
Cdd:pfam07888 356 RVQLSESRRELQELKASLRVAQKEKEQLQAEKQELLEYIRQLEQRLE 402
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
310-717 |
1.34e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 43.79 E-value: 1.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 310 DLLGTLRKQLSDSESERRALEEQLQRLRDKtdgaMQAHEDAQREV-QRLRSANELLSReksnlahsLQVAQQQAEELRQE 388
Cdd:COG3096 285 ERALELRRELFGARRQLAEEQYRLVEMARE----LEELSARESDLeQDYQAASDHLNL--------VQTALRQQEKIERY 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 389 REKLQAAQEELRRQRDRLEEEQEdavqdgarvrrELERSHRQLEQLEGKRSVLAKELVEVREAL----SRATLQRDMLQA 464
Cdd:COG3096 353 QEDLEELTERLEEQEEVVEEAAE-----------QLAEAEARLEAAEEEVDSLKSQLADYQQALdvqqTRAIQYQQAVQA 421
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 465 -EKAEVAEALTKAEAGRVELELSMTKLRAEEA-----SLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQ-- 536
Cdd:COG3096 422 lEKARALCGLPDLTPENAEDYLAAFRAKEQQAteevlELEQKLSVADAARRQFEKAYELVCKIAGEVERSQAWQTAREll 501
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 537 -------RQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQ--AQEALEQQLPTLRHERSQLQEQLAQLSRQLS 607
Cdd:COG3096 502 rryrsqqALAQRLQQLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQldAAEELEELLAELEAQLEELEEQAAEAVEQRS 581
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 608 GREQELEQ--ARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAEREGRtlseeATRLRLEKEAlegslfEVQRQlaQ 685
Cdd:COG3096 582 ELRQQLEQlrARIKELAARAPAWLAAQDALERLREQSGEALADSQEVTAAM-----QQLLEREREA------TVERD--E 648
|
410 420 430
....*....|....*....|....*....|..
gi 2217272553 686 LEARREQLEAEGQALLLAKETLTGELAGLRQQ 717
Cdd:COG3096 649 LAARKQALESQIERLSQPGGAEDPRLLALAER 680
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
285-612 |
1.57e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 42.97 E-value: 1.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 285 ALIHSALHKRQLQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELL 364
Cdd:COG4372 27 AALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 365 SREKSNLAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEgkrsvlAKE 444
Cdd:COG4372 107 QEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALS------EAE 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 445 LVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQ 524
Cdd:COG4372 181 AEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEI 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 525 LEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSR 604
Cdd:COG4372 261 EELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELA 340
|
....*...
gi 2217272553 605 QLSGREQE 612
Cdd:COG4372 341 DLLQLLLV 348
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
898-1114 |
1.72e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.83 E-value: 1.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 898 VRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREVQRQEAGELrrslgegakerea 977
Cdd:COG4942 43 LAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAEL------------- 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 978 lrrsneeLRSAVKKAESERISLKLANEDKEQ---KLALLEEARTAVGKEAGELRTGLQEVERSRLEARRELQELRRQMKM 1054
Cdd:COG4942 110 -------LRALYRLGRQPPLALLLSPEDFLDavrRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAE 182
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1055 LDSENTRLGRELAELQGRLALGERAEKESRRETLGLRQRLLKGEASLEVMRQELQVAQRK 1114
Cdd:COG4942 183 LEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
348-683 |
1.74e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 42.58 E-value: 1.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 348 EDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERS 427
Cdd:COG4372 34 RKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEEL 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 428 HRQLEQLEGKRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSAL 507
Cdd:COG4372 114 QEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDELLKEAN 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 508 NESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPT 587
Cdd:COG4372 194 RNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDT 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 588 LRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRL 667
Cdd:COG4372 274 EEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLLVGLLDN 353
|
330
....*....|....*.
gi 2217272553 668 EKEALEGSLFEVQRQL 683
Cdd:COG4372 354 DVLELLSKGAEAGVAD 369
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
618-794 |
1.92e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.83 E-value: 1.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 618 REAQRQVEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEG 697
Cdd:COG1579 3 PEDLRALLDLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 698 QALLLAKE--TLTGELAGLRQQIIATQEKAsldKELMAQklVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEAE 775
Cdd:COG1579 83 GNVRNNKEyeALQKEIESLKRRISDLEDEI---LELMER--IEELEEELAELEAELAELEAELEEKKAELDEELAELEAE 157
|
170
....*....|....*....
gi 2217272553 776 RAQLQSQLQREQEELLARL 794
Cdd:COG1579 158 LEELEAEREELAAKIPPEL 176
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
343-506 |
2.33e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.45 E-value: 2.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 343 AMQAHEDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVR- 421
Cdd:COG1579 1 AMPEDLRALLDLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEe 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 422 --------RELERSHRQLEQLEGKRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAgrvELELSMTKLRAE 493
Cdd:COG1579 81 qlgnvrnnKEYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKA---ELDEELAELEAE 157
|
170
....*....|...
gi 2217272553 494 EASLQDSLSKLSA 506
Cdd:COG1579 158 LEELEAEREELAA 170
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
589-1062 |
2.36e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 42.81 E-value: 2.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 589 RHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAERE-GRTLSEEATRLRL 667
Cdd:pfam05557 1 RAELIESKARLSQLQNEKKQMELEHKRARIELEKKASALKRQLDRESDRNQELQKRIRLLEKREAEaEEALREQAELNRL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 668 EKEALEGslfevqrqLAQLEARREQLEAEGQALLLAketLTGELAGLRQQI-IATQEKASLDKELMAQKLVQAEREAQAS 746
Cdd:pfam05557 81 KKKYLEA--------LNKKLNEKESQLADAREVISC---LKNELSELRRQIqRAELELQSTNSELEELQERLDLLKAKAS 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 747 LREQRAAHEEDLQRLQREKEAAWRELEAERAQLQS---QLQREQEEL--LARLEAEKEELSEEIAALQQERDEGLLLAES 821
Cdd:pfam05557 150 EAEQLRQNLEKQQSSLAEAEQRIKELEFEIQSQEQdseIVKNSKSELarIPELEKELERLREHNKHLNENIENKLLLKEE 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 822 ekqqalslKESEKTALsEKLMGTRHSLATISLEMERQKRDAQSRQEQDRSTVNALTS---------ELRDLRAQREEAAA 892
Cdd:pfam05557 230 --------VEDLKRKL-EREEKYREEAATLELEKEKLEQELQSWVKLAQDTGLNLRSpedlsrrieQLQQREIVLKEENS 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 893 AHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQ------RKLRESQEGREVQRQEAGELRR 966
Cdd:pfam05557 301 SLTSSARQLEKARRELEQELAQYLKKIEDLNKKLKRHKALVRRLQRRVLLLTkerdgyRAILESYDKELTMSNYSPQLLE 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 967 SLGEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEeaRTAVGKEAGELRTGLQEVERSRLEARRELQ 1046
Cdd:pfam05557 381 RIEEAEDMTQKMQAHNEEMEAQLSVAEEELGGYKQQAQTLERELQALR--QQESLADPSYSKEEVDSLRRKLETLELERQ 458
|
490
....*....|....*.
gi 2217272553 1047 ELRRQMKMLDSENTRL 1062
Cdd:pfam05557 459 RLREQKNELEMELERR 474
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
323-1048 |
2.89e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.47 E-value: 2.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 323 ESERRALEEQLQRLRDKtdgamqaHEDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAEELRQEREKLQAAQEELRRQ 402
Cdd:pfam01576 4 EEEMQAKEEELQKVKER-------QQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQELEEI 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 403 RDRLEeeqedavqdgARVRRELERShrqlEQLEGKRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVE 482
Cdd:pfam01576 77 LHELE----------SRLEEEEERS----QQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILL 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 483 LELSMTKLRAEEASLQDSLSKLSAlneslaqdkldlnrlvAQLEEEKSALQGRQRQAEQEATVAReeqerleelrleqev 562
Cdd:pfam01576 143 LEDQNSKLSKERKLLEERISEFTS----------------NLAEEEEKAKSLSKLKNKHEAMISD--------------- 191
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 563 arqgLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEALAKEHA 642
Cdd:pfam01576 192 ----LEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIR 267
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 643 GLAVQL------VAAEREGRTLSEEATR-LRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQALllaKETLTGELAGLR 715
Cdd:pfam01576 268 ELEAQIselqedLESERAARNKAEKQRRdLGEELEALKTELEDTLDTTAAQQELRSKREQEVTEL---KKALEEETRSHE 344
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 716 QQIIATQEKASLDKELMAQKLVQAEReAQASLREQRAAHEEDLQRLQREK---EAAWRELEAERAQLQSQLQreqeELLA 792
Cdd:pfam01576 345 AQLQEMRQKHTQALEELTEQLEQAKR-NKANLEKAKQALESENAELQAELrtlQQAKQDSEHKRKKLEGQLQ----ELQA 419
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 793 RLEAEKEELSEEiaalqqerdeglllaeSEKQQALSLKESEKTALSEKLMGTRHSLATISLEMERQKRDAQSRQEQDRST 872
Cdd:pfam01576 420 RLSESERQRAEL----------------AEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQ 483
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 873 VNALTSELRDLRAQREEAAAAHAQEV---RRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRE 949
Cdd:pfam01576 484 KLNLSTRLRQLEDERNSLQEQLEEEEeakRNVERQLSTLQAQLSDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEE 563
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 950 SQEGREVQRQEAGELRRSLGEGAKEREALRRSNEELRSAVKK-----AESERISLKLANE-DKEQKLALLEEART-AVGK 1022
Cdd:pfam01576 564 KAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLEKKQKKfdqmlAEEKAISARYAEErDRAEAEAREKETRAlSLAR 643
|
730 740
....*....|....*....|....*.
gi 2217272553 1023 EAGELRTGLQEVERSRLEARRELQEL 1048
Cdd:pfam01576 644 ALEEALEAKEELERTNKQLRAEMEDL 669
|
|
| KpsE |
COG3524 |
Capsule polysaccharide export protein KpsE/RkpR [Cell wall/membrane/envelope biogenesis]; |
1523-1631 |
3.21e-03 |
|
Capsule polysaccharide export protein KpsE/RkpR [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442746 [Multi-domain] Cd Length: 370 Bit Score: 41.76 E-value: 3.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1523 EHDRQVLQERLDAARQALSEARKQSS--SLGEQVQTLRGEVADLELQRVEAEGQLQQLREVLRQRQEgeaaalnTVQKLQ 1600
Cdd:COG3524 183 EEEVERAEERLRDAREALLAFRNRNGilDPEATAEALLQLIATLEGQLAELEAELAALRSYLSPNSP-------QVRQLR 255
|
90 100 110
....*....|....*....|....*....|.
gi 2217272553 1601 DERRLLQERLGSLQRALAQLEAEKREVERSA 1631
Cdd:COG3524 256 RRIAALEKQIAAERARLTGASGGDSLASLLA 286
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
290-504 |
3.74e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.44 E-value: 3.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 290 ALHKRQLQVQDMRGRYEASQDLLGTLRKQlsDSESERRALEEQL--QRLRDKTDGAMQAHEDAQREVQRLRSANELLSRE 367
Cdd:PTZ00121 1579 ALRKAEEAKKAEEARIEEVMKLYEEEKKM--KAEEAKKAEEAKIkaEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAE 1656
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 368 KSNLAHSLQVAQQQAEELRQErEKLQAAQEELRRQRDRLEEEQEDAvQDGARVRRELERSHRQLEQL---EGKRSVLAKE 444
Cdd:PTZ00121 1657 EENKIKAAEEAKKAEEDKKKA-EEAKKAEEDEKKAAEALKKEAEEA-KKAEELKKKEAEEKKKAEELkkaEEENKIKAEE 1734
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 445 LVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKL 504
Cdd:PTZ00121 1735 AKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRM 1794
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
972-1206 |
3.78e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 3.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 972 AKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARTAVGKEAGELRTGLQEVERSRLEARRELQELRRQ 1051
Cdd:COG4942 26 EAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEE 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1052 MKMLDSENTRLGR-----------ELAELQGRLALGERAEKESRRETLGLRQRLlkgeASLEVMRQELQVAQRKLQEQEG 1120
Cdd:COG4942 106 LAELLRALYRLGRqpplalllspeDFLDAVRRLQYLKYLAPARREQAEELRADL----AELAALRAELEAERAELEALLA 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1121 EFRTRERRLlgsleEARGTEKQQLdharglelkLEAARAEAAELGLRLSAAEGRAQGLEAELARVEVQRRAAEAQLGGLR 1200
Cdd:COG4942 182 ELEEERAAL-----EALKAERQKL---------LARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAG 247
|
....*.
gi 2217272553 1201 SALRRG 1206
Cdd:COG4942 248 FAALKG 253
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1274-1709 |
3.92e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 41.93 E-value: 3.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1274 LREFLQELRSAQRERDELRTQTSALNRQLAEMEAErdsaTSRARQLQKAVAESEEARRSVDGRLSGVQAELALQEESVRR 1353
Cdd:TIGR04523 175 LNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKK----IQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISN 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1354 SERERRATLDQVATLERSLQATESELRASQEKISKMKANETKLEGDKRRLKEVLDASESRTVKLELqrRSLEGELQRSRL 1433
Cdd:TIGR04523 251 TQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNKELKSEL--KNQEKKLEEIQN 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1434 GLSDREAQAQALQDRVDSLQRQVADSEVKAGTLQLTVERLNGALAKVEESEGALRDKVRGLTealaqssaslNSTRDKNL 1513
Cdd:TIGR04523 329 QISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLE----------SQINDLES 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1514 HLQKAltacEHDRQVLQERLDAARQALSEARKQSSSLGEQVQTLRGEVADLELQRVEAEGQLQQLREVLRQRQEGEAAAL 1593
Cdd:TIGR04523 399 KIQNQ----EKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLS 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1594 NTVQKLQDERRLLQERLGSLQRALAQLEAEKREVERSALRLEKDRVALRRTLDKVEREKLRSHEDTVRLSAEKGRLDRTL 1673
Cdd:TIGR04523 475 RSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFEL 554
|
410 420 430
....*....|....*....|....*....|....*...
gi 2217272553 1674 TGAELE--LAEAQRQIQQLEAQVVVLEQSHSPAQLEVD 1709
Cdd:TIGR04523 555 KKENLEkeIDEKNKEIEELKQTQKSLKKKQEEKQELID 592
|
|
| COG4995 |
COG4995 |
Uncharacterized conserved protein, contains CHAT domain [Function unknown]; |
295-707 |
4.08e-03 |
|
Uncharacterized conserved protein, contains CHAT domain [Function unknown];
Pssm-ID: 444019 [Multi-domain] Cd Length: 711 Bit Score: 41.88 E-value: 4.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 295 QLQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHS 374
Cdd:COG4995 55 AAALAAAALALALLAAAALALLLLALALAALALALLAAALALALAAAALAALALLAALLALAAAAALLALLAALALLALL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 375 LQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSR 454
Cdd:COG4995 135 AALAAALAAAAAAALAAALAAAAAAAAAAALLALALALAAAALALLALLLAALAAALAAAAAALALLLALLLLAALAAAL 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 455 ATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQG 534
Cdd:COG4995 215 AAALAALLLALLALAAALLALLLLALLALAAAAAALAAAAAALLALAAALLLLAALAALAAAAAAAALAALALAAALALA 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 535 RQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELE 614
Cdd:COG4995 295 AAALALALLLAAAAAAALAALALLLLAALLLLLAALALLALLLLLAAAALLAAALAAALALAAALALALLAALLLLLAAL 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 615 QARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSL--FEVQRQLAQLEARREQ 692
Cdd:COG4995 375 LALLLEALLLLLLALLAALLLLAAALLALAAAQLLRLLLAALALLLALAAYAAARLALLALIeyIILPDRLYAFVQLYQL 454
|
410
....*....|....*
gi 2217272553 693 LEAEGQALLLAKETL 707
Cdd:COG4995 455 LIAPIEAELPGIKRL 469
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
575-1154 |
4.12e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 42.13 E-value: 4.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 575 EQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAR--EKEALAKEHAGL------AV 646
Cdd:pfam12128 275 ASRQEERQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSELEALEDQHGafLDADIETAAADQeqlpswQS 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 647 QLVAAEREGRTLSEEATRLRLEKEALEGSL-FEVQRQLAQLEARRE-QLEAEGQALLLAKETLTGELAGLRQQIIATQEK 724
Cdd:pfam12128 355 ELENLEERLKALTGKHQDVTAKYNRRRSKIkEQNNRDIAGIKDKLAkIREARDRQLAVAEDDLQALESELREQLEAGKLE 434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 725 ASLDKELMAQ-----KLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEA---ERAQLQSqLQREQEELLARLEA 796
Cdd:pfam12128 435 FNEEEYRLKSrlgelKLRLNQATATPELLLQLENFDERIERAREEQEAANAEVERlqsELRQARK-RRDQASEALRQASR 513
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 797 EKEELSEEIAALQQERD--EGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLATISLEMERQKRDAQSRQEQDRSTVN 874
Cdd:pfam12128 514 RLEERQSALDELELQLFpqAGTLLHFLRKEAPDWEQSIGKVISPELLHRTDLDPEVWDGSVGGELNLYGVKLDLKRIDVP 593
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 875 ---ALTSELRDLRAQREEAAAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQlrlLEDARDGLRRELLEAQRKLRESQ 951
Cdd:pfam12128 594 ewaASEEELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFARTA---LKNARLDLRRLFDEKQSEKDKKN 670
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 952 EGREVQRQEAGELRRSLgegAKEREALRRSNEELRSAVKKAESErislklANEDKEQKLALLEEARTAvgkeagELRTGL 1031
Cdd:pfam12128 671 KALAERKDSANERLNSL---EAQLKQLDKKHQAWLEEQKEQKRE------ARTEKQAYWQVVEGALDA------QLALLK 735
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1032 QEVERSRLEARRELQELRRQMKM------LDSEN-TRLGRELAELQGRLALGERAEKESRRETLGLRQRLLKGEASLEVM 1104
Cdd:pfam12128 736 AAIAARRSGAKAELKALETWYKRdlaslgVDPDViAKLKREIRTLERKIERIAVRRQEVLRYFDWYQETWLQRRPRLATQ 815
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1105 RQELQVAQRKLQEQEGEFRTRERRLLGSLEEARGTEKQQLDHARGLELKL 1154
Cdd:pfam12128 816 LSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRGL 865
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
376-704 |
4.39e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.43 E-value: 4.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 376 QVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEdavqdgarvrrELERSHRQLEQLEGKRSVLAKELVEVREALSRA 455
Cdd:COG4372 24 ILIAALSEQLRKALFELDKLQEELEQLREELEQARE-----------ELEQLEEELEQARSELEQLEEELEELNEQLQAA 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 456 TLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGR 535
Cdd:COG4372 93 QAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQE 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 536 QRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQ 615
Cdd:COG4372 173 LQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELL 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 616 ARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEA 695
Cdd:COG4372 253 EEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELAL 332
|
....*....
gi 2217272553 696 EGQALLLAK 704
Cdd:COG4372 333 AILLAELAD 341
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1279-1694 |
4.48e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.08 E-value: 4.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1279 QELRSAQRERDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEEARRSVDGRLSGVQAELALQEESVRRSERER 1358
Cdd:pfam01576 12 EELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQELEEILHELESRLEEEEERS 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1359 RATLDQVATLERSLQATESELRASQEKISKMKANETKLEGDKRRLKEVLDASESRTVKLELQRRSLEGELQRSRLGLSDR 1438
Cdd:pfam01576 92 QQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERKLLEERISEFTSNLAEE 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1439 EAQAQALQDRVDSLQRQVADSEVKAGTLQLTVERLNGALAKVEESEGALRDKVRGLTEALAQSSASLNSTRDK------- 1511
Cdd:pfam01576 172 EEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEElqaalar 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1512 -------NLHLQKALTACEHDRQVLQERLDAARQALSEARKQSSSLGEQVQTLRGEVAD-LELQRVEAEGQLQQLREVLR 1583
Cdd:pfam01576 252 leeetaqKNNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEELEALKTELEDtLDTTAAQQELRSKREQEVTE 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1584 QRQEGEAAALNTVQKLQDERRLLQERLGSLQRALAQLEAEKREVERSALRLEKDRVALRRTLDKVEREKLRSHEDTVRLS 1663
Cdd:pfam01576 332 LKKALEEETRSHEAQLQEMRQKHTQALEELTEQLEQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLE 411
|
410 420 430
....*....|....*....|....*....|.
gi 2217272553 1664 AEKGRLDRTLTGAELELAEAQRQIQQLEAQV 1694
Cdd:pfam01576 412 GQLQELQARLSESERQRAELAEKLSKLQSEL 442
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
1421-1613 |
4.81e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 41.96 E-value: 4.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1421 RRSLEGELQRSRLGLSDREAQAQAlqdRVDSLQRQVADSEVKagtLQLTVERLNGAlaKVEESEGALRDkvrglTEALAQ 1500
Cdd:PRK10929 185 LKALVDELELAQLSANNRQELARL---RSELAKKRSQQLDAY---LQALRNQLNSQ--RQREAERALES-----TELLAE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1501 SSASLNSTRDKNLHLQKALT------ACEHDRQVLQERLDAA-----RQALSEARKQ------SSSLGE----QV----- 1554
Cdd:PRK10929 252 QSGDLPKSIVAQFKINRELSqalnqqAQRMDLIASQQRQAASqtlqvRQALNTLREQsqwlgvSNALGEalraQVarlpe 331
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217272553 1555 ----QTLRGEVADLELQRVEAEGQLQQLREVLRQRQEGeAAALNTVQK--LQDERRLLQERLGSL 1613
Cdd:PRK10929 332 mpkpQQLDTEMAQLRVQRLRYEDLLNKQPQLRQIRQAD-GQPLTAEQNriLDAQLRTQRELLNSL 395
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1270-1763 |
4.93e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.87 E-value: 4.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1270 VRGALREF---LQELRSAQRERDELR----TQTSALNRQLAEMEAERDSATSRARQLQKAVAESEEARRSVDGRLSGVQA 1342
Cdd:PRK04863 235 MEAALRENrmtLEAIRVTQSDRDLFKhlitESTNYVAADYMRHANERRVHLEEALELRRELYTSRRQLAAEQYRLVEMAR 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1343 ELAlqeesvrrsererratldqvaTLERSLQATESELRASQEKISKMKANETKLEGDKRRLKEVLDASEsrtvKLELQRR 1422
Cdd:PRK04863 315 ELA---------------------ELNEAESDLEQDYQAASDHLNLVQTALRQQEKIERYQADLEELEE----RLEEQNE 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1423 SLEGelqrSRLGLSDREAQAQALQDRVDSLQRQVAD-------SEVKAGTLQLTVERLNGA----------LAKVEESEG 1485
Cdd:PRK04863 370 VVEE----ADEQQEENEARAEAAEEEVDELKSQLADyqqaldvQQTRAIQYQQAVQALERAkqlcglpdltADNAEDWLE 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1486 ALRDKVRGLTEALAQSSASLNSTRDKNLHLQKALT-----ACEHDRQVLQerlDAARQALSEARKQSSsLGEQVQTLRGE 1560
Cdd:PRK04863 446 EFQAKEQEATEELLSLEQKLSVAQAAHSQFEQAYQlvrkiAGEVSRSEAW---DVARELLRRLREQRH-LAEQLQQLRMR 521
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1561 VADLElQRVEAEGQLQQLREVLRQRQEgeaaalntvQKLQDErrllqerlgslqrALAQLEAEKREVERSALRLEKDRVA 1640
Cdd:PRK04863 522 LSELE-QRLRQQQRAERLLAEFCKRLG---------KNLDDE-------------DELEQLQEELEARLESLSESVSEAR 578
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1641 LRRTLDKVEREKLRShedtvrlsaekgrLDRTLTGAELELAEAQRQIQQLEAQvvvleqshSPAQLEvDAQQQQLELQQE 1720
Cdd:PRK04863 579 ERRMALRQQLEQLQA-------------RIQRLAARAPAWLAAQDALARLREQ--------SGEEFE-DSQDVTEYMQQL 636
|
490 500 510 520
....*....|....*....|....*....|....*....|...
gi 2217272553 1721 VERLRSAqaqtertleareRAHRQRVSTLKGQLQQELRRSSAP 1763
Cdd:PRK04863 637 LEREREL------------TVERDELAARKQALDEEIERLSQP 667
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1530-1753 |
5.11e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.29 E-value: 5.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1530 QERLDAARQALSEARKQSSSLGEQVQTLRGEVADLELQRVEAEGQLQQLREVLRQRQEGEAAALNTVQKLQDERRLLQER 1609
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1610 LGSLQRALAQLEA------------------EKREVERSALRLEKDRVALRRTLDKVEREKLRSHEDTVRLSAEKGRLDR 1671
Cdd:COG4942 99 LEAQKEELAELLRalyrlgrqpplalllspeDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEA 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1672 TLTGAELELAEAQRQIQQLEAQVVVLEQSHSPAQLEVDAQQQQLELQQeverlRSAQAQTERTLEARERAHRQRVSTLKG 1751
Cdd:COG4942 179 LLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELE-----ALIARLEAEAAAAAERTPAAGFAALKG 253
|
..
gi 2217272553 1752 QL 1753
Cdd:COG4942 254 KL 255
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
465-1142 |
5.24e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 41.88 E-value: 5.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 465 EKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQaEQEAT 544
Cdd:TIGR00618 185 EFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKK-QQLLK 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 545 VAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEAleqqlPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQV 624
Cdd:TIGR00618 264 QLRARIEELRAQEAVLEETQERINRARKAAPLAAHI-----KAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQS 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 625 EALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQALLLAK 704
Cdd:TIGR00618 339 SIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSA 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 705 ET-LTGELAGLRQQIIATQEKASLdKELMAQKLVQAEREAQASLREQRAAHEEDLQRLQR-----EKEAAWRELEAERAQ 778
Cdd:TIGR00618 419 FRdLQGQLAHAKKQQELQQRYAEL-CAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTkeqihLQETRKKAVVLARLL 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 779 LQSQLQREQEELLARLeaEKEELSEEIAALQQERDEGLLLAESEKQQALSLKESEKTALseklmgtRHSLATISLEMERQ 858
Cdd:TIGR00618 498 ELQEEPCPLCGSCIHP--NPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSE-------RKQRASLKEQMQEI 568
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 859 KRDAQSRQEQDRS---TVNALTSELRDLRAQREEAAAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDG 935
Cdd:TIGR00618 569 QQSFSILTQCDNRskeDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTAL 648
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 936 LRRELLEAQRKLRESQEGREVQRQEAGELR-RSLGEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLE 1014
Cdd:TIGR00618 649 HALQLTLTQERVREHALSIRVLPKELLASRqLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASS 728
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1015 EARTAVGKEAGELRTGLQEVERSRLEARRELQELRRQMKMLDSENTRLGRELAELQGRLALGERAEKESRREtlgLRQRL 1094
Cdd:TIGR00618 729 SLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHL---LKTLE 805
|
650 660 670 680
....*....|....*....|....*....|....*....|....*...
gi 2217272553 1095 LKGEASLEVMRQELQVAQRKLQEQEGEFRTRERRLLGSLEEARGTEKQ 1142
Cdd:TIGR00618 806 AEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLK 853
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
588-710 |
5.27e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 41.61 E-value: 5.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 588 LRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEalERAAREKEALAKEHAGLAvQLVAAEREGRTLSEEATRLRL 667
Cdd:COG0542 402 VRMEIDSKPEELDELERRLEQLEIEKEALKKEQDEASF--ERLAELRDELAELEEELE-ALKARWEAEKELIEEIQELKE 478
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 2217272553 668 EKEALEGSLFEVQRQLAQLEARREQLEAegqallLAKETLTGE 710
Cdd:COG0542 479 ELEQRYGKIPELEKELAELEEELAELAP------LLREEVTEE 515
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1280-1637 |
5.82e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 41.70 E-value: 5.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1280 ELRSAQRERDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEEARRSVDGRLSGVQAELALQEESVRRSERERR 1359
Cdd:pfam01576 216 ESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQRR 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1360 ATLDQVATLERSLQATESELRASQEKISKMKANETKL-----EGDKRRLKEVLDASESRTVKLELQRRSLEgELQRSRLG 1434
Cdd:pfam01576 296 DLGEELEALKTELEDTLDTTAAQQELRSKREQEVTELkkaleEETRSHEAQLQEMRQKHTQALEELTEQLE-QAKRNKAN 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1435 LSDR----EAQAQALQDRVDSLQRQVADSEVKAGTLQLTVERLNGALAKVEESEGALRDKVRGLTEALAQSSASLNSTRD 1510
Cdd:pfam01576 375 LEKAkqalESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEG 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1511 KNLHLQKALTACEHDRQVLQERLDAARQALSEARKQSSSLGEQVQTLRGEVADLELQRVEAEGQLQQLREVLRQRQEGEA 1590
Cdd:pfam01576 455 KNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLE 534
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 2217272553 1591 AALNTVQKLQDERRLLQERLGSLQRALAQLEAEKREVERSALRLEKD 1637
Cdd:pfam01576 535 EDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQE 581
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
507-846 |
6.32e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.04 E-value: 6.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 507 LNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLP 586
Cdd:COG4372 4 LGEKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELE 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 587 TLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLR 666
Cdd:COG4372 84 ELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQ 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 667 LEKEALEGSLfeVQRQLAQLEARREQLEAEGQALLLAKETLTGELAGLRQQIIATQEKASLDKELMAQKLVQAEREAQAS 746
Cdd:COG4372 164 EELAALEQEL--QALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDA 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 747 LREQRAAHEEDLQRLQREKEAAWRELEAERAQLQSQLQREQEELLARLEAEKEELSEEIAALQQERDEGLLLAESEKQQA 826
Cdd:COG4372 242 LELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAAL 321
|
330 340
....*....|....*....|
gi 2217272553 827 LSLKESEKTALSEKLMGTRH 846
Cdd:COG4372 322 LELAKKLELALAILLAELAD 341
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
318-538 |
6.97e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 41.28 E-value: 6.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 318 QLSDSESERRALEEQLQRLRDKTDGAMQAH-----------EDAQREVQR----LRSANELLSREKSNLAHSLQVAQQ-- 380
Cdd:PTZ00121 1526 EAKKAEEAKKADEAKKAEEKKKADELKKAEelkkaeekkkaEEAKKAEEDknmaLRKAEEAKKAEEARIEEVMKLYEEek 1605
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 381 --QAEELRQ-EREKLQAAQ----EELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVR--EA 451
Cdd:PTZ00121 1606 kmKAEEAKKaEEAKIKAEElkkaEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKkaEE 1685
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 452 LSRATLQRDMLQAEKAEVAEALTKAE------AGRVELELSMTKLRAEEASLQDSLSKLSAlnESLAQDKLDLNRlVAQL 525
Cdd:PTZ00121 1686 DEKKAAEALKKEAEEAKKAEELKKKEaeekkkAEELKKAEEENKIKAEEAKKEAEEDKKKA--EEAKKDEEEKKK-IAHL 1762
|
250
....*....|....*
gi 2217272553 526 --EEEKSALQGRQRQ 538
Cdd:PTZ00121 1763 kkEEEKKAEEIRKEK 1777
|
|
| COG1754 |
COG1754 |
Uncharacterized C-terminal domain of topoisomerase IA [Function unknown]; |
916-1261 |
7.54e-03 |
|
Uncharacterized C-terminal domain of topoisomerase IA [Function unknown];
Pssm-ID: 441360 [Multi-domain] Cd Length: 892 Bit Score: 41.34 E-value: 7.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 916 LREAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREALRRSNEELRSAVKKAESE 995
Cdd:COG1754 137 LLRRRLVLRRLVRRLLVRLLLLRLVLLLLRLLVARRAARRRRRRRRRRARRRELERRRERARAAEAEEAAAAAAAAADAG 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 996 RISLKLANEDKEQKLALLEEARTAVGKEAGELRTGLQEVERSRLEARRELQELRRQMKMldSENTRLGRELAELQGRLAL 1075
Cdd:COG1754 217 RAAAARDGKGGGKLAAGGAAAAAAAAAAAAAAAAALAEAAAAAAVREPPTPTTTTTAQA--ATTTTTRAAAARTTRSAQQ 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1076 GERAEKESRRETLGLRQRLLKGEASLEVMRQELQVAQRKLQEQEGEFRTRERRLLGSLEEARGTEKQQLDHARGLELKLE 1155
Cdd:COG1754 295 AARRTRLGGEGTYTTTTTTTTTTSAAAAAAAAAAAALAAAAAAAYAPPPPYYYKKKAAAAAAAAAAAAAAAARRPPAARA 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 1156 AARAEAAELGLRLSAAEGRAQGLEAELARVEVQRRAAEAQLGGLR----SALRRGLGLGRAPSPAPRPVPGSPARDAPAE 1231
Cdd:COG1754 375 ALLSDDRLLLELLLLRRTAAAAAAAAAATATTTAAAAAAGAGAVGtaaaGAVFFFGGFLLFAEEEDDDEEDDDDDDLPAL 454
|
330 340 350
....*....|....*....|....*....|
gi 2217272553 1232 GSGEGLNSPSTLECSPGSQPPSPGPATSPA 1261
Cdd:COG1754 455 EEGLPLLKEGVLADQHFTQPPPRYTEAPLV 484
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
602-723 |
7.64e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 40.72 E-value: 7.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 602 LSRQLSGREQELEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAEREGrtlseeaTRLRLEKEALEGSLFEVQR 681
Cdd:PRK09039 44 LSREISGKDSALDRLNSQIAELADLLSLERQGNQDLQDSVANLRASLSAAEAER-------SRLQALLAELAGAGAAAEG 116
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 2217272553 682 QLAQLEARREQLEAEGQALLLAKETLTGELAGLRQQIIATQE 723
Cdd:PRK09039 117 RAGELAQELDSEKQVSARALAQVELLNQQIAALRRQLAALEA 158
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
579-1119 |
8.62e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 40.77 E-value: 8.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 579 EALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAEREGRTL 658
Cdd:TIGR04523 78 KILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKL 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 659 SEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEgqalLLAKETLTGELaglrqqiiatQEKASLDKELMAQKLvq 738
Cdd:TIGR04523 158 NNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNK----LLKLELLLSNL----------KKKIQKNKSLESQIS-- 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 739 aereaqaSLREQRAAHEEDLQRLQREKEAAWRELEAERAQLQsQLQREQEELLARLEAEKeelseeiaaLQQERDEGLLl 818
Cdd:TIGR04523 222 -------ELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLN-QLKDEQNKIKKQLSEKQ---------KELEQNNKKI- 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 819 aeSEKQQALSLKESEKTAL-SEKLMGTRHSLATISLEMERQKRDAQSRQEQDRSTVNALTSELRDLRAQREEAAAAHAQE 897
Cdd:TIGR04523 284 --KELEKQLNQLKSEISDLnNQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEK 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 898 VRRLQE---QARDLGKQRDSCLREAEELRTQLRLLEdardglrRELLEAQRKLRESQEGREVQRQEAGELRrslgegaKE 974
Cdd:TIGR04523 362 QRELEEkqnEIEKLKKENQSYKQEIKNLESQINDLE-------SKIQNQEKLNQQKDEQIKKLQQEKELLE-------KE 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 975 REALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARTAVGKEAGELRTGLQEVERsrlearrELQELRRQMKM 1054
Cdd:TIGR04523 428 IERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQK-------ELKSKEKELKK 500
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217272553 1055 LDSENTRLGRELAELQGRLALGERAEKESRRETLGLRQRLLKGEASLEVMRQELQVAQRKLQEQE 1119
Cdd:TIGR04523 501 LNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKENLEKEIDE 565
|
|
| RecN |
COG0497 |
DNA repair ATPase RecN [Replication, recombination and repair]; |
571-779 |
8.68e-03 |
|
DNA repair ATPase RecN [Replication, recombination and repair];
Pssm-ID: 440263 [Multi-domain] Cd Length: 555 Bit Score: 40.83 E-value: 8.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 571 LRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSR-QLS-GREQELEQARREAQRQVEALERAAREKEALAKEHAGLAVQL 648
Cdd:COG0497 167 WRALKKELEELRADEAERARELDLLRFQLEELEAaALQpGEEEELEEERRRLSNAEKLREALQEALEALSGGEGGALDLL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217272553 649 VAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQALllakETLTGELAGLRQ----------QI 718
Cdd:COG0497 247 GQALRALERLAEYDPSLAELAERLESALIELEEAASELRRYLDSLEFDPERL----EEVEERLALLRRlarkygvtveEL 322
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2217272553 719 IATQEKasldkelMAQKLVQAEreaqaslreqraAHEEDLQRLQREKEAAWRELEAERAQL 779
Cdd:COG0497 323 LAYAEE-------LRAELAELE------------NSDERLEELEAELAEAEAELLEAAEKL 364
|
|
| PLN02316 |
PLN02316 |
synthase/transferase |
382-445 |
9.23e-03 |
|
synthase/transferase
Pssm-ID: 215180 [Multi-domain] Cd Length: 1036 Bit Score: 41.01 E-value: 9.23e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2217272553 382 AEELRQEREKLQAAQEELRRQRD---RLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKEL 445
Cdd:PLN02316 251 LEEKRRELEKLAKEEAERERQAEeqrRREEEKAAMEADRAQAKAEVEKRREKLQNLLKKASRSADNV 317
|
|
| |
