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Conserved domains on  [gi|2217328578|ref|XP_047300595|]
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trafficking protein particle complex subunit 12 isoform X3 [Homo sapiens]

Protein Classification

ICP22 family protein( domain architecture ID 708738)

ICP22 family protein similar to Herpesvirus saimiri transcriptional regulator ICP22 homolog (also known as immediate-early protein) that regulates the transcription of alphaherpesviruses and their host genes

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
PHA03169 super family cl27451
hypothetical protein; Provisional
 3-174 1.12e-06

hypothetical protein; Provisional


The actual alignment was detected with superfamily member PHA03169:

Pssm-ID: 223003 [Multi-domain]  Cd Length: 413  Bit Score: 51.12  E-value: 1.12e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578   3 DAGGGEETPAPEAPHPPQLAPPEEQGLLFQEEtiDLGGDEFGSEENETASEGSSPLADKLNEHMMESvlisDSPNSEGDA 82
Cdd:PHA03169   92 PSGSGSESVGSPTPSPSGSAEELASGLSPENT--SGSSPESPASHSPPPSPPSHPGPHEPAPPESHN----PSPNQQPSS 165

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578  83 GDLGRVRDEAEPGGEGDPGPEPAGTPSPSGEADGDCAPEDAAPSSGGAPRQDAAREVPG----------SEAARPEQE-P 151
Cdd:PHA03169  166 FLQPSHEDSPEEPEPPTSEPEPDSPGPPQSETPTSSPPPQSPPDEPGEPQSPTPQQAPSpntqqaveheDEPTEPEREgP 245

                         170       180
                  ....*....|....*....|...
gi 2217328578 152 PVAEPVPVCTIFSQRAPPASGDG 174
Cdd:PHA03169  246 PFPGHRSHSYTVVGWKPSTRPGG 268
PRK07003 super family cl35530
DNA polymerase III subunit gamma/tau;
93-264 3.79e-03

DNA polymerase III subunit gamma/tau;


The actual alignment was detected with superfamily member PRK07003:

Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 40.22  E-value: 3.79e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578  93 EPGGEGDPGPEPAGTPSPSGEADgdcAPEDAAPSSGGAPRQDAAREVPG--SEAARPEQEPPVAEPVPVCTIfSQRAPPA 170
Cdd:PRK07003  359 EPAVTGGGAPGGGVPARVAGAVP---APGARAAAAVGASAVPAVTAVTGaaGAALAPKAAAAAAATRAEAPP-AAPAPPA 434

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578 171 SGDGFEPQMVKSPSF--GGASEASARTPPQVVQPSPSLSTFFGDTAASHSLASDFFDSFTTSAFISVSnpgaGSPAPASP 248
Cdd:PRK07003  435 TADRGDDAADGDAPVpaKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAA----TPAAVPDA 510

                         170
                  ....*....|....*.
gi 2217328578 249 PPLAVPGTEGRPEPVA 264
Cdd:PRK07003  511 RAPAAASREDAPAAAA 526
 
Name Accession Description Interval E-value
PHA03169 PHA03169
hypothetical protein; Provisional
 3-174 1.12e-06

hypothetical protein; Provisional


Pssm-ID: 223003 [Multi-domain]  Cd Length: 413  Bit Score: 51.12  E-value: 1.12e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578   3 DAGGGEETPAPEAPHPPQLAPPEEQGLLFQEEtiDLGGDEFGSEENETASEGSSPLADKLNEHMMESvlisDSPNSEGDA 82
Cdd:PHA03169   92 PSGSGSESVGSPTPSPSGSAEELASGLSPENT--SGSSPESPASHSPPPSPPSHPGPHEPAPPESHN----PSPNQQPSS 165

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578  83 GDLGRVRDEAEPGGEGDPGPEPAGTPSPSGEADGDCAPEDAAPSSGGAPRQDAAREVPG----------SEAARPEQE-P 151
Cdd:PHA03169  166 FLQPSHEDSPEEPEPPTSEPEPDSPGPPQSETPTSSPPPQSPPDEPGEPQSPTPQQAPSpntqqaveheDEPTEPEREgP 245

                         170       180
                  ....*....|....*....|...
gi 2217328578 152 PVAEPVPVCTIFSQRAPPASGDG 174
Cdd:PHA03169  246 PFPGHRSHSYTVVGWKPSTRPGG 268
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
93-264 3.79e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 40.22  E-value: 3.79e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578  93 EPGGEGDPGPEPAGTPSPSGEADgdcAPEDAAPSSGGAPRQDAAREVPG--SEAARPEQEPPVAEPVPVCTIfSQRAPPA 170
Cdd:PRK07003  359 EPAVTGGGAPGGGVPARVAGAVP---APGARAAAAVGASAVPAVTAVTGaaGAALAPKAAAAAAATRAEAPP-AAPAPPA 434

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578 171 SGDGFEPQMVKSPSF--GGASEASARTPPQVVQPSPSLSTFFGDTAASHSLASDFFDSFTTSAFISVSnpgaGSPAPASP 248
Cdd:PRK07003  435 TADRGDDAADGDAPVpaKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAA----TPAAVPDA 510

                         170
                  ....*....|....*.
gi 2217328578 249 PPLAVPGTEGRPEPVA 264
Cdd:PRK07003  511 RAPAAASREDAPAAAA 526
 
Name Accession Description Interval E-value
PHA03169 PHA03169
hypothetical protein; Provisional
 3-174 1.12e-06

hypothetical protein; Provisional


Pssm-ID: 223003 [Multi-domain]  Cd Length: 413  Bit Score: 51.12  E-value: 1.12e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578   3 DAGGGEETPAPEAPHPPQLAPPEEQGLLFQEEtiDLGGDEFGSEENETASEGSSPLADKLNEHMMESvlisDSPNSEGDA 82
Cdd:PHA03169   92 PSGSGSESVGSPTPSPSGSAEELASGLSPENT--SGSSPESPASHSPPPSPPSHPGPHEPAPPESHN----PSPNQQPSS 165

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578  83 GDLGRVRDEAEPGGEGDPGPEPAGTPSPSGEADGDCAPEDAAPSSGGAPRQDAAREVPG----------SEAARPEQE-P 151
Cdd:PHA03169  166 FLQPSHEDSPEEPEPPTSEPEPDSPGPPQSETPTSSPPPQSPPDEPGEPQSPTPQQAPSpntqqaveheDEPTEPEREgP 245

                         170       180
                  ....*....|....*....|...
gi 2217328578 152 PVAEPVPVCTIFSQRAPPASGDG 174
Cdd:PHA03169  246 PFPGHRSHSYTVVGWKPSTRPGG 268
PHA03264 PHA03264
envelope glycoprotein D; Provisional
 91-205 1.38e-04

envelope glycoprotein D; Provisional


Pssm-ID: 223029 [Multi-domain]  Cd Length: 416  Bit Score: 44.23  E-value: 1.38e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578  91 EAEPGGEGDPGPEpAGTPSPSGEADGDcAPEDAAPSSGGAPRQDAAREVPGSEAARPEQEPPvAEPVPvctifsqrAPPA 170
Cdd:PHA03264  259 EESKGYEPPPAPS-GGSPAPPGDDRPE-AKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAG-GEPKP--------GPPR 327

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2217328578 171 SGdgfePQMVKsPSFGGASEASARTPPQVVQPSPS 205
Cdd:PHA03264  328 PA----PDADR-PEGWPSLEAITFPPPTPATPAVP 357
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 78-208 2.43e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 43.82  E-value: 2.43e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578  78 SEGDAGDLGRVRDEAEPGGEGDPGPEPAGTPSPSGEADGDCAPEDAAPSSGGAPRQDAAREVPGSEAARPEQEPPVA--- 154
Cdd:PRK07764  636 PAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGqad 715

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2217328578 155 ----EPVPVCTIFSQRAPPASGDGFEPQMVKSPSFGGASEASARTPPQVVQPSPSLST 208
Cdd:PRK07764  716 dpaaQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAA 773
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 89-205 4.28e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 43.05  E-value: 4.28e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578  89 RDEAEPGGEGDPGPEPAGTPSPSGEADGDCAPEDAAPSSGGAPRQDAAREVPGSEAARPEQEPPVAEPVPVCTIFSQRAP 168
Cdd:PRK07764  377 RLERLERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSP 456

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 2217328578 169 PASGDGFEPQMVKSPSFGGASEASARTPPQVVQPSPS 205
Cdd:PRK07764  457 PPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAA 493
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 4-202 4.70e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 43.05  E-value: 4.70e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578   4 AGGGEETPAP-------EAPHPPQLAPPEEQGllfqeetidlggdefGSEENETASEGSSPLADKLNEHMMESVLISDSP 76
Cdd:PRK07764  594 AAGGEGPPAPassgppeEAARPAAPAAPAAPA---------------APAPAGAAAAPAEASAAPAPGVAAPEHHPKHVA 658

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578  77 NSEGDAGDLGRVRDEAEPGGEGD-PGPEPAGTPSPSGEADGDCAPEDAA-------PSSGGAPR---QDAAREVPGSEAA 145
Cdd:PRK07764  659 VPDASDGGDGWPAKAGGAAPAAPpPAPAPAAPAAPAGAAPAQPAPAPAAtppagqaDDPAAQPPqaaQGASAPSPAADDP 738

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2217328578 146 RPEQEPPVAEPVPVCTIFSQRAPPASGDGFEPQMVKSPSFGGASEASARTPPQVVQP 202
Cdd:PRK07764  739 VPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDD 795
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 91-206 8.15e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 42.28  E-value: 8.15e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578  91 EAEPGGEGDPGPEPAGTPSPSGEADGDCAPEDAAPSSGGAPRQDAAREVPGSEAARPEQEPPVAEPVPVCTIFSQRAPPA 170
Cdd:PRK07764  393 APAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAA 472

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2217328578 171 SGDGfEPQMVKSPSFGGASEASARTPPQVVQPSPSL 206
Cdd:PRK07764  473 APEP-TAAPAPAPPAAPAPAAAPAAPAAPAAPAGAD 507
PRK14954 PRK14954
DNA polymerase III subunits gamma and tau; Provisional
 102-174 2.59e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184918 [Multi-domain]  Cd Length: 620  Bit Score: 40.70  E-value: 2.59e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2217328578 102 PEPAGTP---SPSGEADGDCAPEDAAPSSGGAPRQDAAREVPGSEAARPEQEPPVAEPVPVCTIFSQRAPPASGDG 174
Cdd:PRK14954  382 PSPAGSPdvkKKAPEPDLPQPDRHPGPAKPEAPGARPAELPSPASAPTPEQQPPVARSAPLPPSPQASAPRNVASG 457
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
5-205 3.28e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 40.24  E-value: 3.28e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578   5 GGGEETPAPEAPHPPQLAPPEEQGLLFQEETidlggdefgseeneTASEGSSPLADKLNEHMMESVLISDSPNSEGDAGd 84
Cdd:PRK12323  368 SGGGAGPATAAAAPVAQPAPAAAAPAAAAPA--------------PAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEA- 432

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578  85 LGRVRDEAEPGGEGDPGPEPAGTPSPSGeadgdcAPEDAAPSSGGAPRQDA---AREVPGSEAARPEQEPPVAEPVPVCt 161
Cdd:PRK12323  433 LAAARQASARGPGGAPAPAPAPAAAPAA------AARPAAAGPRPVAAAAAaapARAAPAAAPAPADDDPPPWEELPPE- 505

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 2217328578 162 iFSQRAPPASGDGFEPQMVKSPSFGGASEASARTPPQVVQPSPS 205
Cdd:PRK12323  506 -FASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAA 548
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
93-264 3.79e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 40.22  E-value: 3.79e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578  93 EPGGEGDPGPEPAGTPSPSGEADgdcAPEDAAPSSGGAPRQDAAREVPG--SEAARPEQEPPVAEPVPVCTIfSQRAPPA 170
Cdd:PRK07003  359 EPAVTGGGAPGGGVPARVAGAVP---APGARAAAAVGASAVPAVTAVTGaaGAALAPKAAAAAAATRAEAPP-AAPAPPA 434

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578 171 SGDGFEPQMVKSPSF--GGASEASARTPPQVVQPSPSLSTFFGDTAASHSLASDFFDSFTTSAFISVSnpgaGSPAPASP 248
Cdd:PRK07003  435 TADRGDDAADGDAPVpaKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAA----TPAAVPDA 510

                         170
                  ....*....|....*.
gi 2217328578 249 PPLAVPGTEGRPEPVA 264
Cdd:PRK07003  511 RAPAAASREDAPAAAA 526
PHA03247 PHA03247
large tegument protein UL36; Provisional
 10-221 4.01e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 40.31  E-value: 4.01e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578   10 TPAPEAPHPPQLAPPEEQGLLFQEEtidlGGDEFGSEENETASEGSSPLADKLNEHMMESVLISDS---------PNSEG 80
Cdd:PHA03247  2615 SPLPPDTHAPDPPPPSPSPAANEPD----PHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQAssppqrprrRAARP 2690

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578   81 DAGDLGRVRDEAEPGGEGDPGPEPA--GTPSPSGEADGDCAPEdAAPSSGGAPRQDAAREVPGSEAARPEQEPPVAEPVP 158
Cdd:PHA03247  2691 TVGSLTSLADPPPPPPTPEPAPHALvsATPLPPGPAAARQASP-ALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAP 2769

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2217328578  159 vctifsqrAPPASGDGFEPQMVKSPSFGGASEASArTPPQVVQPSPSLSTFFGDTAASHSLAS 221
Cdd:PHA03247  2770 --------APPAAPAAGPPRRLTRPAVASLSESRE-SLPSPWDPADPPAAVLAPAAALPPAAS 2823
PHA03379 PHA03379
EBNA-3A; Provisional
 1-204 4.61e-03

EBNA-3A; Provisional


Pssm-ID: 223066 [Multi-domain]  Cd Length: 935  Bit Score: 40.04  E-value: 4.61e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578   1 MEDAGGGEET----------PAPEAPHPPQLAPPEEqgLLFQEETIDLGGDEFGSEENETASEGSSPLADklnEHMMESV 70
Cdd:PHA03379  391 LMRAGKLTERarealekasePTYGTPRPPVEKPRPE--VPQSLETATSHGSAQVPEPPPVHDLEPGPLHD---QHSMAPC 465

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578  71 LISDSPNS---EGDAGDLgrvrdeaEPGGEGDPGPEPAGTPSPSGEAdgdCAPEDAAPSsggaprqdaarEVPGSEAARP 147
Cdd:PHA03379  466 PVAQLPPGplqDLEPGDQ-------LPGVVQDGRPACAPVPAPAGPI---VRPWEASLS-----------QVPGVAFAPV 524

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2217328578 148 EQEPPVAEPVPVCTIFSQR----APPA---SGDGfEPQMVKSPSFGGASEASARTPPQVVQPSP 204
Cdd:PHA03379  525 MPQPMPVEPVPVPTVALERpvcpAPPLiamQGPG-ETSGIVRVRERWRPAPWTPNPPRSPSQMS 587
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 73-204 5.11e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 39.58  E-value: 5.11e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578  73 SDSPNSEGDAGDLGRVRDEAEPGGEGDPGPEPAGTPSPSGEADGDCAPEDAAPSSG----GAPRQDAAREVPGSEAARPE 148
Cdd:PRK07764  641 AAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAapaqPAPAPAATPPAGQADDPAAQ 720

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2217328578 149 QEPPVAEPVPVCTiFSQRAPPASGDGFEPQMVKSPSFGGASEASARTPPQVVQPSP 204
Cdd:PRK07764  721 PPQAAQGASAPSP-AADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPP 775
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 100-212 5.22e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 39.70  E-value: 5.22e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578 100 PGPEPAGTPSPSGEADGDCAPEDAAPSSGGAPRQDAAREVPGSEAARPEQEPPVAEPVPVCTIFSQRAPPASGDGFEPQM 179
Cdd:PRK14951  383 RPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAPETVAI 462

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2217328578 180 VKSPSFGGASEASARTPPQVVQPSPSLSTFFGD 212
Cdd:PRK14951  463 PVRVAPEPAVASAAPAPAAAPAAARLTPTEEGD 495
PRK12495 PRK12495
hypothetical protein; Provisional
 75-194 6.27e-03

hypothetical protein; Provisional


Pssm-ID: 183558 [Multi-domain]  Cd Length: 226  Bit Score: 38.31  E-value: 6.27e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217328578  75 SPNSEGDAGDlGRVRDEAEPGGEGDPGPEPAGTPSPSGEADGDCAPEDAAPSSGGAPRQDAAREVPGSEAA---RPEQEP 151
Cdd:PRK12495   66 QPVTEDGAAG-DDAGDGAEATAPSDAGSQASPDDDAQPAAEAEAADQSAPPEASSTSATDEAATDPPATAAardGPTPDP 144

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 2217328578 152 PVAEPVPVCTIFSQRAPPASGDGFEPQmvKSPSFGGASEASAR 194
Cdd:PRK12495  145 TAQPATPDERRSPRQRPPVSGEPPTPS--TPDAHVAGTLQAAR 185
PHA03169 PHA03169
hypothetical protein; Provisional
 75-151 8.08e-03

hypothetical protein; Provisional


Pssm-ID: 223003 [Multi-domain]  Cd Length: 413  Bit Score: 38.80  E-value: 8.08e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2217328578  75 SPNSEGDAGDLGRVRDEAEPGGEGDPGPEPAGTPSPSGEADGDCAPEdaAPSSGGAPRQDAAREVPGSEAARPEQEP 151
Cdd:PHA03169   83 EKEERGQGGPSGSGSESVGSPTPSPSGSAEELASGLSPENTSGSSPE--SPASHSPPPSPPSHPGPHEPAPPESHNP 157
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
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