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Conserved domains on  [gi|2296788044|ref|XP_050448827|]
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uncharacterized protein LOC126850156 [Cataglyphis hispanica]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4806 super family cl24587
Domain of unknown function (DUF4806); This presumed domain is functionally uncharacterized. ...
 147-212 1.80e-06

Domain of unknown function (DUF4806); This presumed domain is functionally uncharacterized. This domain family is found in eukaryotes, and is approximately 80 amino acids in length.


The actual alignment was detected with superfamily member pfam16064:

Pssm-ID: 465001  Cd Length: 87  Bit Score: 44.92  E-value: 1.80e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2296788044 147 FPIDNIEDLRTFEKLLIENQINRQKLIKELSRIGG--NDIKRIIfnllRALISDKLACLFNYIGKKKQ 212
Cdd:pfam16064   7 FPIADEEDLERLEAAVRTDEKIRNQYVNFLRKIKGksGDLKEAF----SKIFSDEALTNYNWTGISKK 70
 
Name Accession Description Interval E-value
DUF4806 pfam16064
Domain of unknown function (DUF4806); This presumed domain is functionally uncharacterized. ...
 147-212 1.80e-06

Domain of unknown function (DUF4806); This presumed domain is functionally uncharacterized. This domain family is found in eukaryotes, and is approximately 80 amino acids in length.


Pssm-ID: 465001  Cd Length: 87  Bit Score: 44.92  E-value: 1.80e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2296788044 147 FPIDNIEDLRTFEKLLIENQINRQKLIKELSRIGG--NDIKRIIfnllRALISDKLACLFNYIGKKKQ 212
Cdd:pfam16064   7 FPIADEEDLERLEAAVRTDEKIRNQYVNFLRKIKGksGDLKEAF----SKIFSDEALTNYNWTGISKK 70
 
Name Accession Description Interval E-value
DUF4806 pfam16064
Domain of unknown function (DUF4806); This presumed domain is functionally uncharacterized. ...
 147-212 1.80e-06

Domain of unknown function (DUF4806); This presumed domain is functionally uncharacterized. This domain family is found in eukaryotes, and is approximately 80 amino acids in length.


Pssm-ID: 465001  Cd Length: 87  Bit Score: 44.92  E-value: 1.80e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2296788044 147 FPIDNIEDLRTFEKLLIENQINRQKLIKELSRIGG--NDIKRIIfnllRALISDKLACLFNYIGKKKQ 212
Cdd:pfam16064   7 FPIADEEDLERLEAAVRTDEKIRNQYVNFLRKIKGksGDLKEAF----SKIFSDEALTNYNWTGISKK 70
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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