|
Name |
Accession |
Description |
Interval |
E-value |
| PL48 |
pfam15903 |
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific ... |
17-369 |
2.34e-180 |
|
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific HL-60 cell differentiation. The N-terminal part of the family is found to induce the formation of filopodia. It is found in vertebrates.
:
Pssm-ID: 464930 Cd Length: 297 Bit Score: 531.59 E-value: 2.34e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 17 VNRSQSFAGVLGSHERgpslsfRSFPVFSPPGPPRKppALSRVSRMFSVAH---PAAKVPQPERLDLVYTALKRGLTAYL 93
Cdd:pfam15903 1 ITRSQSFAGFSSAQER------RNLSSFSRPSLRSK--PPSKSSRMFTSSHksgPPPKVPQPERVDRVYEALKKGLKEYL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 94 EVHQQEQEKLQGQIRESKRNSRLGFLYDLDKQVKSIERFLRRLEFHASKidelyeaycvqrrlrdgaynmvrayttgspg 173
Cdd:pfam15903 73 EVHQAELDKLSRQQKDTKRNSRLGFLYDLDKQIKSVERYIRRLEFHISK------------------------------- 121
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 174 sreardslaeatrghreyteSMCLLESELEAQLGEFHLRMKGLAGFARLCVGDQYEICMKYGRQRWKLRGRIEGSGKQVW 253
Cdd:pfam15903 122 --------------------DMCLLEGELENLLGEFHIKMKGLAGFARLCPGDQYEVLMRYGRQRWKLRGRIETDDKQVW 181
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 254 DSEETIFLPLLTEFLSIKVTELKGLANHVVVGSVSCETKDLFAALPQVVAVDINDLGTIKLSLEVTWSPFDKDDQPSAAS 333
Cdd:pfam15903 182 DEEEMVFLPLIHENFEIKVTELKGLANHVLVGSVTCETKDLFAARPQVVAVDINDLGTIKLQLEVTWNPFDKEDQLPSAS 261
|
330 340 350
....*....|....*....|....*....|....*.
gi 2462550775 334 SVNKASTVTKRFSTYSQSPPDTPSLREQAFYNMLRR 369
Cdd:pfam15903 262 SVSKASVVSRRGSVYSWTPPDTPSFREKYFLSMLRQ 297
|
|
| Herpes_BLLF1 super family |
cl37540 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
421-609 |
2.72e-08 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
The actual alignment was detected with superfamily member pfam05109:
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 58.39 E-value: 2.72e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 421 RRPETPSSGP-LDEEGAVAPVLANG-----HAPYSRTlshiSEASVDAALAEASVEAVGPESLAWGPSPPT-HPAP---- 489
Cdd:pfam05109 423 KAPESTTTSPtLNTTGFAAPNTTTGlpsstHVPTNLT----APASTGPTVSTADVTSPTPAGTTSGASPVTpSPSPrdng 498
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 490 THGEHP-----------------SPVPPALDPGHSATSSTLGTTGSVPTSTDPAPSAHLDSVHKSTDSGPSELP-----G 547
Cdd:pfam05109 499 TESKAPdmtsptsavttptpnatSPTPAVTTPTPNATSPTLGKTSPTSAVTTPTPNATSPTPAVTTPTPNATIPtlgktS 578
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2462550775 548 PTHTTTGSTYSAITTTHSAPSP----LTHTTTGSTHKPIISTLTTTGPTLNIIGPVQTTTSPTHTM 609
Cdd:pfam05109 579 PTSAVTTPTPNATSPTVGETSPqantTNHTLGGTSSTPVVTSPPKNATSAVTTGQHNITSSSTSSM 644
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1068-1189 |
1.54e-06 |
|
HEAT repeat [General function prediction only];
:
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 48.86 E-value: 1.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 1068 LLVRNLNSDDQAVVLKALRLApeGRLR-RDGLRALSSLLVHGNNKVMAAVSTQLRSLSlgptfRERALLCFLDQLEDEDV 1146
Cdd:COG1413 20 ALIAALADEDPDVRAAAARAL--GRLGdPRAVPALLEALKDPDPEVRAAAAEALGRIG-----DPEAVPALIAALKDEDP 92
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 2462550775 1147 QTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQ 1189
Cdd:COG1413 93 EVRRAAAEALGRLGDPAAVPALLEALKDPDWEVRRAAARALGR 135
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
396-932 |
1.13e-05 |
|
large tegument protein UL36; Provisional
The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.94 E-value: 1.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 396 GTARHSPAPRPLVQQPEPLPIQVAFRRPEtPSSGPLDEEGAVAPVLANGHAPYSRTLSHISEASVDAALAEASVEAVGPE 475
Cdd:PHA03247 2606 GDPRGPAPPSPLPPDTHAPDPPPPSPSPA-ANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPR 2684
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 476 SLAWGPS--PPTHPA--PTHGEHPSPVPPALDPGHSATSSTLGTTGSVPTST-DPAPSAHLDSvhKSTDSGPSELPGPTH 550
Cdd:PHA03247 2685 RRAARPTvgSLTSLAdpPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPaAPAPPAVPAG--PATPGGPARPARPPT 2762
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 551 TTTGSTYSAITTTHSAPSPLTHTTTGSTHKPIISTLTT-------TGPTLNIIGPVQTTTSPTHTMPSPThttaspthts 623
Cdd:PHA03247 2763 TAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSpwdpadpPAAVLAPAAALPPAASPAGPLPPPT---------- 2832
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 624 tspthtptspthktsmspptttsptpsgmglvqTATSPTHPTTSPTHPTTSPILINVSPSTSLEL--ATLSSPSKHSDPT 701
Cdd:PHA03247 2833 ---------------------------------SAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRrpPSRSPAAKPAAPA 2879
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 702 LPGTDSLPcSPPVSNSyTQADPMAPRTPHPSPahssrkpltsPAPDPSESTVQSLSPTPSPPTPAPQHSDLCLAMAVQTP 781
Cdd:PHA03247 2880 RPPVRRLA-RPAVSRS-TESFALPPDQPERPP----------QPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTT 2947
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 782 VPTAAGGSGDRSLEEALGALMAA-LDDYRGQFPELQGLEQEVTRLESLLMRQGLTR--SRASSLSITVEHALESFSFL-- 856
Cdd:PHA03247 2948 DPAGAGEPSGAVPQPWLGALVPGrVAVPRFRVPQPAPSREAPASSTPPLTGHSLSRvsSWASSLALHEETDPPPVSLKqt 3027
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 857 ----NEDEDEDNDVPGDRPPSSPEAGAEDSID----SPSARPLSTGCPALDAALVRHLYhcsrlllklgtFGPLRCQEAW 928
Cdd:PHA03247 3028 lwppDDTEDSDADSLFDSDSERSDLEALDPLPpephDPFAHEPDPATPEAGARESPSSQ-----------FGPPPLSANA 3096
|
....
gi 2462550775 929 ALER 932
Cdd:PHA03247 3097 ALSR 3100
|
|
| HR1 super family |
cl00087 |
Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small ... |
142-209 |
1.65e-03 |
|
Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases; The HR1 domain, also called the ACC (anti-parallel coiled-coil) finger domain or Rho-binding domain binds small GTPases from the Rho family. It is found in Rho effector proteins including PKC-related kinases such as vertebrate PRK1 (or PKN) and yeast PKC1 protein kinases C, as well as in rhophilins and Rho-associated kinase (ROCK). Rho family members function as molecular switches, cycling between inactive and active forms, controlling a variety of cellular processes. HR1 domains may occur in repeat arrangements (PKN contains three HR1 domains), separated by a short linker region.
The actual alignment was detected with superfamily member cd11636:
Pssm-ID: 469609 Cd Length: 74 Bit Score: 38.42 E-value: 1.65e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462550775 142 KIDELYEAYCVQRRLRDGAYNMVRAYTTGSPGSREArdsLAEATRGHREYTESMCLLESELEAQLGEF 209
Cdd:cd11636 10 RIEELRHHFRVEHAVAEGAKNVLRLLGAGKAQDRKA---ISEAQSKLSESSQKLDLLRVSLEQRLVEL 74
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PL48 |
pfam15903 |
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific ... |
17-369 |
2.34e-180 |
|
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific HL-60 cell differentiation. The N-terminal part of the family is found to induce the formation of filopodia. It is found in vertebrates.
Pssm-ID: 464930 Cd Length: 297 Bit Score: 531.59 E-value: 2.34e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 17 VNRSQSFAGVLGSHERgpslsfRSFPVFSPPGPPRKppALSRVSRMFSVAH---PAAKVPQPERLDLVYTALKRGLTAYL 93
Cdd:pfam15903 1 ITRSQSFAGFSSAQER------RNLSSFSRPSLRSK--PPSKSSRMFTSSHksgPPPKVPQPERVDRVYEALKKGLKEYL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 94 EVHQQEQEKLQGQIRESKRNSRLGFLYDLDKQVKSIERFLRRLEFHASKidelyeaycvqrrlrdgaynmvrayttgspg 173
Cdd:pfam15903 73 EVHQAELDKLSRQQKDTKRNSRLGFLYDLDKQIKSVERYIRRLEFHISK------------------------------- 121
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 174 sreardslaeatrghreyteSMCLLESELEAQLGEFHLRMKGLAGFARLCVGDQYEICMKYGRQRWKLRGRIEGSGKQVW 253
Cdd:pfam15903 122 --------------------DMCLLEGELENLLGEFHIKMKGLAGFARLCPGDQYEVLMRYGRQRWKLRGRIETDDKQVW 181
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 254 DSEETIFLPLLTEFLSIKVTELKGLANHVVVGSVSCETKDLFAALPQVVAVDINDLGTIKLSLEVTWSPFDKDDQPSAAS 333
Cdd:pfam15903 182 DEEEMVFLPLIHENFEIKVTELKGLANHVLVGSVTCETKDLFAARPQVVAVDINDLGTIKLQLEVTWNPFDKEDQLPSAS 261
|
330 340 350
....*....|....*....|....*....|....*.
gi 2462550775 334 SVNKASTVTKRFSTYSQSPPDTPSLREQAFYNMLRR 369
Cdd:pfam15903 262 SVSKASVVSRRGSVYSWTPPDTPSFREKYFLSMLRQ 297
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
421-609 |
2.72e-08 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 58.39 E-value: 2.72e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 421 RRPETPSSGP-LDEEGAVAPVLANG-----HAPYSRTlshiSEASVDAALAEASVEAVGPESLAWGPSPPT-HPAP---- 489
Cdd:pfam05109 423 KAPESTTTSPtLNTTGFAAPNTTTGlpsstHVPTNLT----APASTGPTVSTADVTSPTPAGTTSGASPVTpSPSPrdng 498
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 490 THGEHP-----------------SPVPPALDPGHSATSSTLGTTGSVPTSTDPAPSAHLDSVHKSTDSGPSELP-----G 547
Cdd:pfam05109 499 TESKAPdmtsptsavttptpnatSPTPAVTTPTPNATSPTLGKTSPTSAVTTPTPNATSPTPAVTTPTPNATIPtlgktS 578
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2462550775 548 PTHTTTGSTYSAITTTHSAPSP----LTHTTTGSTHKPIISTLTTTGPTLNIIGPVQTTTSPTHTM 609
Cdd:pfam05109 579 PTSAVTTPTPNATSPTVGETSPqantTNHTLGGTSSTPVVTSPPKNATSAVTTGQHNITSSSTSSM 644
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1068-1189 |
1.54e-06 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 48.86 E-value: 1.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 1068 LLVRNLNSDDQAVVLKALRLApeGRLR-RDGLRALSSLLVHGNNKVMAAVSTQLRSLSlgptfRERALLCFLDQLEDEDV 1146
Cdd:COG1413 20 ALIAALADEDPDVRAAAARAL--GRLGdPRAVPALLEALKDPDPEVRAAAAEALGRIG-----DPEAVPALIAALKDEDP 92
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 2462550775 1147 QTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQ 1189
Cdd:COG1413 93 EVRRAAAEALGRLGDPAAVPALLEALKDPDWEVRRAAARALGR 135
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
461-617 |
1.10e-05 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 48.36 E-value: 1.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 461 DAALAEASVEAVGPESLAWGPSPPThPAP---THGEHPSPVPPALDPGHSATSSTLGTTGSVPTSTDPAPSAHLDSVhks 537
Cdd:PHA03255 6 DKAGAVLAMILICETSLIWTSSGSS-TASagnVTGTTAVTTPSPSASGPSTNQSTTLTTTSAPITTTAILSTNTTTV--- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 538 TDSGPSELPGPThTTTGSTYSaiTTTHSAPSPLTHTTTG-STHKPIISTLT-----TTGPTLNIIGPVQTTTSPTH-TMP 610
Cdd:PHA03255 82 TSTGTTVTPVPT-TSNASTIN--VTTKVTAQNITATEAGtGTSTGVTSNVTtrsssTTSATTRITNATTLAPTLSSkGTS 158
|
....*..
gi 2462550775 611 SPTHTTA 617
Cdd:PHA03255 159 NATKTTA 165
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
396-932 |
1.13e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.94 E-value: 1.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 396 GTARHSPAPRPLVQQPEPLPIQVAFRRPEtPSSGPLDEEGAVAPVLANGHAPYSRTLSHISEASVDAALAEASVEAVGPE 475
Cdd:PHA03247 2606 GDPRGPAPPSPLPPDTHAPDPPPPSPSPA-ANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPR 2684
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 476 SLAWGPS--PPTHPA--PTHGEHPSPVPPALDPGHSATSSTLGTTGSVPTST-DPAPSAHLDSvhKSTDSGPSELPGPTH 550
Cdd:PHA03247 2685 RRAARPTvgSLTSLAdpPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPaAPAPPAVPAG--PATPGGPARPARPPT 2762
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 551 TTTGSTYSAITTTHSAPSPLTHTTTGSTHKPIISTLTT-------TGPTLNIIGPVQTTTSPTHTMPSPThttaspthts 623
Cdd:PHA03247 2763 TAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSpwdpadpPAAVLAPAAALPPAASPAGPLPPPT---------- 2832
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 624 tspthtptspthktsmspptttsptpsgmglvqTATSPTHPTTSPTHPTTSPILINVSPSTSLEL--ATLSSPSKHSDPT 701
Cdd:PHA03247 2833 ---------------------------------SAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRrpPSRSPAAKPAAPA 2879
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 702 LPGTDSLPcSPPVSNSyTQADPMAPRTPHPSPahssrkpltsPAPDPSESTVQSLSPTPSPPTPAPQHSDLCLAMAVQTP 781
Cdd:PHA03247 2880 RPPVRRLA-RPAVSRS-TESFALPPDQPERPP----------QPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTT 2947
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 782 VPTAAGGSGDRSLEEALGALMAA-LDDYRGQFPELQGLEQEVTRLESLLMRQGLTR--SRASSLSITVEHALESFSFL-- 856
Cdd:PHA03247 2948 DPAGAGEPSGAVPQPWLGALVPGrVAVPRFRVPQPAPSREAPASSTPPLTGHSLSRvsSWASSLALHEETDPPPVSLKqt 3027
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 857 ----NEDEDEDNDVPGDRPPSSPEAGAEDSID----SPSARPLSTGCPALDAALVRHLYhcsrlllklgtFGPLRCQEAW 928
Cdd:PHA03247 3028 lwppDDTEDSDADSLFDSDSERSDLEALDPLPpephDPFAHEPDPATPEAGARESPSSQ-----------FGPPPLSANA 3096
|
....
gi 2462550775 929 ALER 932
Cdd:PHA03247 3097 ALSR 3100
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
423-614 |
1.43e-04 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 45.90 E-value: 1.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 423 PETPSSGPLDEEGAVAPVLANGHAPYSRTLSHISEASVDAALAEASVEAVGPESLAWGPSPPTHPAPTHGEHPSPVPPAl 502
Cdd:COG3469 28 TAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAAAATSTSATLVATSTASGAN- 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 503 dPGHSATSSTLGTTGSVPTSTDPAPSAHLDSVHKSTDSGPSELPGPTHTTTGsTYSAITTTHSAPSPLTHTTTGSTHKPI 582
Cdd:COG3469 107 -TGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTE-TATGGTTTTSTTTTTTSASTTPSATTT 184
|
170 180 190
....*....|....*....|....*....|..
gi 2462550775 583 ISTLTTTGPTLNiIGPVQTTTSPTHTMPSPTH 614
Cdd:COG3469 185 ATATTASGATTP-SATTTATTTGPPTPGLPKH 215
|
|
| HEAT_2 |
pfam13646 |
HEAT repeats; This family includes multiple HEAT repeats. |
1098-1188 |
3.43e-04 |
|
HEAT repeats; This family includes multiple HEAT repeats.
Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 40.78 E-value: 3.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 1098 LRALSSLLVHGNNKVMAAVSTQlrslSLGPTFRERALLCFLDQLEDEDVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTE 1177
Cdd:pfam13646 1 LPALLQALLRDPDPEVRAAAIR----ALGRIGDPEAVPALLELLKDEDPAVRRAAAEALGKIGDPEALPALLELLRDDDD 76
|
90
....*....|..
gi 2462550775 1178 A-VREAARQSLQ 1188
Cdd:pfam13646 77 DvVRAAAAEALA 88
|
|
| HR1_PKN1_3 |
cd11636 |
Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein ... |
142-209 |
1.65e-03 |
|
Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein Kinase N1; PKN1, also called PKNalpha or Protein-kinase C-related kinase 1 (PRK1), is a serine/threonine protein kinase that is activated by the Rho family of small GTPases, and by fatty acids such as arachidonic and linoleic acids. It is expressed ubiquitously and is the most abundant PKN isoform in neurons. PKN1 is implicated in a variety of functions including cytoskeletal reorganization, cardiac cell survival, cell adhesion, and glucose transport, among others. PKN1 contains three HR1 domains, a C2 domain, and a kinase domain. This model characterizes the third HR1 domain of PKN1. HR1 domains are anti-parallel coiled-coil (ACC) domains that bind small GTPases from the Rho family; PKN1 binds the GTPases RhoA, RhoB, and RhoC, and can also interact weakly with Rac.
Pssm-ID: 212026 Cd Length: 74 Bit Score: 38.42 E-value: 1.65e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462550775 142 KIDELYEAYCVQRRLRDGAYNMVRAYTTGSPGSREArdsLAEATRGHREYTESMCLLESELEAQLGEF 209
Cdd:cd11636 10 RIEELRHHFRVEHAVAEGAKNVLRLLGAGKAQDRKA---ISEAQSKLSESSQKLDLLRVSLEQRLVEL 74
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
498-786 |
4.26e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 41.10 E-value: 4.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 498 VPPALDPGHSATSSTLGTTGSVP-TSTDPAPSAHLDSVHKSTDSGPSELPGPTHTTTGSTYSAITTthSAPSplthTTTG 576
Cdd:pfam17823 47 VPRADNKSSEQ*NFCAATAAPAPvTLTKGTSAAHLNSTEVTAEHTPHGTDLSEPATREGAADGAAS--RALA----AAAS 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 577 STHKPIISTLTTTGPTLniigPVQTTTSPTHTMPSPTHTTASPTHTSTSPTHTPTSPTHKTSMSPPTTTSPTPSGMGLVQ 656
Cdd:pfam17823 121 SSPSSAAQSLPAAIAAL----PSEAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPT 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 657 TATSPTHPTTSPTHPTTSPILINVSPSTSLEL----------------------ATLSSPSKHSDPTLPGTDSLPCSPPV 714
Cdd:pfam17823 197 TAASSAPATLTPARGISTAATATGHPAAGTALaavgnsspaagtvtaavgtvtpAALATLAAAAGTVASAAGTINMGDPH 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 715 SNSYTQADPMAPRTPHPSPAHSSR-------------KPLTSPAPDPSESTVQSLSPTPSPPTPAPQHSDLCLAMAVQTP 781
Cdd:pfam17823 277 ARRLSPAKHMPSDTMARNPAAPMGaqaqgpiiqvstdQPVHNTAGEPTPSPSNTTLEPNTPKSVASTNLAVVTTTKAQAK 356
|
....*
gi 2462550775 782 VPTAA 786
Cdd:pfam17823 357 EPSAS 361
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PL48 |
pfam15903 |
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific ... |
17-369 |
2.34e-180 |
|
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific HL-60 cell differentiation. The N-terminal part of the family is found to induce the formation of filopodia. It is found in vertebrates.
Pssm-ID: 464930 Cd Length: 297 Bit Score: 531.59 E-value: 2.34e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 17 VNRSQSFAGVLGSHERgpslsfRSFPVFSPPGPPRKppALSRVSRMFSVAH---PAAKVPQPERLDLVYTALKRGLTAYL 93
Cdd:pfam15903 1 ITRSQSFAGFSSAQER------RNLSSFSRPSLRSK--PPSKSSRMFTSSHksgPPPKVPQPERVDRVYEALKKGLKEYL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 94 EVHQQEQEKLQGQIRESKRNSRLGFLYDLDKQVKSIERFLRRLEFHASKidelyeaycvqrrlrdgaynmvrayttgspg 173
Cdd:pfam15903 73 EVHQAELDKLSRQQKDTKRNSRLGFLYDLDKQIKSVERYIRRLEFHISK------------------------------- 121
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 174 sreardslaeatrghreyteSMCLLESELEAQLGEFHLRMKGLAGFARLCVGDQYEICMKYGRQRWKLRGRIEGSGKQVW 253
Cdd:pfam15903 122 --------------------DMCLLEGELENLLGEFHIKMKGLAGFARLCPGDQYEVLMRYGRQRWKLRGRIETDDKQVW 181
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 254 DSEETIFLPLLTEFLSIKVTELKGLANHVVVGSVSCETKDLFAALPQVVAVDINDLGTIKLSLEVTWSPFDKDDQPSAAS 333
Cdd:pfam15903 182 DEEEMVFLPLIHENFEIKVTELKGLANHVLVGSVTCETKDLFAARPQVVAVDINDLGTIKLQLEVTWNPFDKEDQLPSAS 261
|
330 340 350
....*....|....*....|....*....|....*.
gi 2462550775 334 SVNKASTVTKRFSTYSQSPPDTPSLREQAFYNMLRR 369
Cdd:pfam15903 262 SVSKASVVSRRGSVYSWTPPDTPSFREKYFLSMLRQ 297
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
421-609 |
2.72e-08 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 58.39 E-value: 2.72e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 421 RRPETPSSGP-LDEEGAVAPVLANG-----HAPYSRTlshiSEASVDAALAEASVEAVGPESLAWGPSPPT-HPAP---- 489
Cdd:pfam05109 423 KAPESTTTSPtLNTTGFAAPNTTTGlpsstHVPTNLT----APASTGPTVSTADVTSPTPAGTTSGASPVTpSPSPrdng 498
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 490 THGEHP-----------------SPVPPALDPGHSATSSTLGTTGSVPTSTDPAPSAHLDSVHKSTDSGPSELP-----G 547
Cdd:pfam05109 499 TESKAPdmtsptsavttptpnatSPTPAVTTPTPNATSPTLGKTSPTSAVTTPTPNATSPTPAVTTPTPNATIPtlgktS 578
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2462550775 548 PTHTTTGSTYSAITTTHSAPSP----LTHTTTGSTHKPIISTLTTTGPTLNIIGPVQTTTSPTHTM 609
Cdd:pfam05109 579 PTSAVTTPTPNATSPTVGETSPqantTNHTLGGTSSTPVVTSPPKNATSAVTTGQHNITSSSTSSM 644
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1068-1189 |
1.54e-06 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 48.86 E-value: 1.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 1068 LLVRNLNSDDQAVVLKALRLApeGRLR-RDGLRALSSLLVHGNNKVMAAVSTQLRSLSlgptfRERALLCFLDQLEDEDV 1146
Cdd:COG1413 20 ALIAALADEDPDVRAAAARAL--GRLGdPRAVPALLEALKDPDPEVRAAAAEALGRIG-----DPEAVPALIAALKDEDP 92
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 2462550775 1147 QTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQ 1189
Cdd:COG1413 93 EVRRAAAEALGRLGDPAAVPALLEALKDPDWEVRRAAARALGR 135
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1100-1206 |
5.68e-06 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 47.32 E-value: 5.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 1100 ALSSLLVHGNNKV-MAAVStqlrslSLGPTFRERALLCFLDQLEDEDVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTEA 1178
Cdd:COG1413 20 ALIAALADEDPDVrAAAAR------ALGRLGDPRAVPALLEALKDPDPEVRAAAAEALGRIGDPEAVPALIAALKDEDPE 93
|
90 100
....*....|....*....|....*...
gi 2462550775 1179 VREAARQSLQQCGEEgqSAHRRLEESLD 1206
Cdd:COG1413 94 VRRAAAEALGRLGDP--AAVPALLEALK 119
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
461-617 |
1.10e-05 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 48.36 E-value: 1.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 461 DAALAEASVEAVGPESLAWGPSPPThPAP---THGEHPSPVPPALDPGHSATSSTLGTTGSVPTSTDPAPSAHLDSVhks 537
Cdd:PHA03255 6 DKAGAVLAMILICETSLIWTSSGSS-TASagnVTGTTAVTTPSPSASGPSTNQSTTLTTTSAPITTTAILSTNTTTV--- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 538 TDSGPSELPGPThTTTGSTYSaiTTTHSAPSPLTHTTTG-STHKPIISTLT-----TTGPTLNIIGPVQTTTSPTH-TMP 610
Cdd:PHA03255 82 TSTGTTVTPVPT-TSNASTIN--VTTKVTAQNITATEAGtGTSTGVTSNVTtrsssTTSATTRITNATTLAPTLSSkGTS 158
|
....*..
gi 2462550775 611 SPTHTTA 617
Cdd:PHA03255 159 NATKTTA 165
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
396-932 |
1.13e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.94 E-value: 1.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 396 GTARHSPAPRPLVQQPEPLPIQVAFRRPEtPSSGPLDEEGAVAPVLANGHAPYSRTLSHISEASVDAALAEASVEAVGPE 475
Cdd:PHA03247 2606 GDPRGPAPPSPLPPDTHAPDPPPPSPSPA-ANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPR 2684
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 476 SLAWGPS--PPTHPA--PTHGEHPSPVPPALDPGHSATSSTLGTTGSVPTST-DPAPSAHLDSvhKSTDSGPSELPGPTH 550
Cdd:PHA03247 2685 RRAARPTvgSLTSLAdpPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPaAPAPPAVPAG--PATPGGPARPARPPT 2762
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 551 TTTGSTYSAITTTHSAPSPLTHTTTGSTHKPIISTLTT-------TGPTLNIIGPVQTTTSPTHTMPSPThttaspthts 623
Cdd:PHA03247 2763 TAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSpwdpadpPAAVLAPAAALPPAASPAGPLPPPT---------- 2832
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 624 tspthtptspthktsmspptttsptpsgmglvqTATSPTHPTTSPTHPTTSPILINVSPSTSLEL--ATLSSPSKHSDPT 701
Cdd:PHA03247 2833 ---------------------------------SAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRrpPSRSPAAKPAAPA 2879
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 702 LPGTDSLPcSPPVSNSyTQADPMAPRTPHPSPahssrkpltsPAPDPSESTVQSLSPTPSPPTPAPQHSDLCLAMAVQTP 781
Cdd:PHA03247 2880 RPPVRRLA-RPAVSRS-TESFALPPDQPERPP----------QPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTT 2947
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 782 VPTAAGGSGDRSLEEALGALMAA-LDDYRGQFPELQGLEQEVTRLESLLMRQGLTR--SRASSLSITVEHALESFSFL-- 856
Cdd:PHA03247 2948 DPAGAGEPSGAVPQPWLGALVPGrVAVPRFRVPQPAPSREAPASSTPPLTGHSLSRvsSWASSLALHEETDPPPVSLKqt 3027
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 857 ----NEDEDEDNDVPGDRPPSSPEAGAEDSID----SPSARPLSTGCPALDAALVRHLYhcsrlllklgtFGPLRCQEAW 928
Cdd:PHA03247 3028 lwppDDTEDSDADSLFDSDSERSDLEALDPLPpephDPFAHEPDPATPEAGARESPSSQ-----------FGPPPLSANA 3096
|
....
gi 2462550775 929 ALER 932
Cdd:PHA03247 3097 ALSR 3100
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1124-1193 |
9.11e-05 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 43.85 E-value: 9.11e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 1124 SLGPTFRERALLCFLDQLEDEDVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQCGEE 1193
Cdd:COG1413 8 ALGRLGDPAAVPALIAALADEDPDVRAAAARALGRLGDPRAVPALLEALKDPDPEVRAAAAEALGRIGDP 77
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
423-614 |
1.43e-04 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 45.90 E-value: 1.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 423 PETPSSGPLDEEGAVAPVLANGHAPYSRTLSHISEASVDAALAEASVEAVGPESLAWGPSPPTHPAPTHGEHPSPVPPAl 502
Cdd:COG3469 28 TAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAAAATSTSATLVATSTASGAN- 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 503 dPGHSATSSTLGTTGSVPTSTDPAPSAHLDSVHKSTDSGPSELPGPTHTTTGsTYSAITTTHSAPSPLTHTTTGSTHKPI 582
Cdd:COG3469 107 -TGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTE-TATGGTTTTSTTTTTTSASTTPSATTT 184
|
170 180 190
....*....|....*....|....*....|..
gi 2462550775 583 ISTLTTTGPTLNiIGPVQTTTSPTHTMPSPTH 614
Cdd:COG3469 185 ATATTASGATTP-SATTTATTTGPPTPGLPKH 215
|
|
| HEAT_2 |
pfam13646 |
HEAT repeats; This family includes multiple HEAT repeats. |
1098-1188 |
3.43e-04 |
|
HEAT repeats; This family includes multiple HEAT repeats.
Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 40.78 E-value: 3.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 1098 LRALSSLLVHGNNKVMAAVSTQlrslSLGPTFRERALLCFLDQLEDEDVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTE 1177
Cdd:pfam13646 1 LPALLQALLRDPDPEVRAAAIR----ALGRIGDPEAVPALLELLKDEDPAVRRAAAEALGKIGDPEALPALLELLRDDDD 76
|
90
....*....|..
gi 2462550775 1178 A-VREAARQSLQ 1188
Cdd:pfam13646 77 DvVRAAAAEALA 88
|
|
| HR1_PKN1_3 |
cd11636 |
Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein ... |
142-209 |
1.65e-03 |
|
Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein Kinase N1; PKN1, also called PKNalpha or Protein-kinase C-related kinase 1 (PRK1), is a serine/threonine protein kinase that is activated by the Rho family of small GTPases, and by fatty acids such as arachidonic and linoleic acids. It is expressed ubiquitously and is the most abundant PKN isoform in neurons. PKN1 is implicated in a variety of functions including cytoskeletal reorganization, cardiac cell survival, cell adhesion, and glucose transport, among others. PKN1 contains three HR1 domains, a C2 domain, and a kinase domain. This model characterizes the third HR1 domain of PKN1. HR1 domains are anti-parallel coiled-coil (ACC) domains that bind small GTPases from the Rho family; PKN1 binds the GTPases RhoA, RhoB, and RhoC, and can also interact weakly with Rac.
Pssm-ID: 212026 Cd Length: 74 Bit Score: 38.42 E-value: 1.65e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462550775 142 KIDELYEAYCVQRRLRDGAYNMVRAYTTGSPGSREArdsLAEATRGHREYTESMCLLESELEAQLGEF 209
Cdd:cd11636 10 RIEELRHHFRVEHAVAEGAKNVLRLLGAGKAQDRKA---ISEAQSKLSESSQKLDLLRVSLEQRLVEL 74
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
504-754 |
1.77e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 42.60 E-value: 1.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 504 PGHSATSSTLGTTG-SVPTSTDPAPSahldSVHKSTDSGPSELPGPTHTTTGSTYSAITTTHSAPSPLTHTTTGSTHKPI 582
Cdd:pfam05109 425 PESTTTSPTLNTTGfAAPNTTTGLPS----STHVPTNLTAPASTGPTVSTADVTSPTPAGTTSGASPVTPSPSPRDNGTE 500
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 583 ISTLTTTGPTLNIIGPVQTTTSPTH--TMPSPTHTTASPThtstspthtPTSPTHKTSMSPPTTTSPTPSgmglVQTATS 660
Cdd:pfam05109 501 SKAPDMTSPTSAVTTPTPNATSPTPavTTPTPNATSPTLG---------KTSPTSAVTTPTPNATSPTPA----VTTPTP 567
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 661 PTHPTTSPTHPTTSPILINVSPSTSLELATLSSPSKHSDPTLPGTDSLPC--SPP-------------VSNSYTQADPMA 725
Cdd:pfam05109 568 NATIPTLGKTSPTSAVTTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVvtSPPknatsavttgqhnITSSSTSSMSLR 647
|
250 260 270
....*....|....*....|....*....|....*.
gi 2462550775 726 PR------TPHPSPAHSSRKP-LTSPAPDPSESTVQ 754
Cdd:pfam05109 648 PSsisetlSPSTSDNSTSHMPlLTSAHPTGGENITQ 683
|
|
| HEAT_2 |
pfam13646 |
HEAT repeats; This family includes multiple HEAT repeats. |
1141-1206 |
4.03e-03 |
|
HEAT repeats; This family includes multiple HEAT repeats.
Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 37.70 E-value: 4.03e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2462550775 1141 LEDEDVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQCGEEGQSAHrrLEESLD 1206
Cdd:pfam13646 9 LRDPDPEVRAAAIRALGRIGDPEAVPALLELLKDEDPAVRRAAAEALGKIGDPEALPA--LLELLR 72
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
498-786 |
4.26e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 41.10 E-value: 4.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 498 VPPALDPGHSATSSTLGTTGSVP-TSTDPAPSAHLDSVHKSTDSGPSELPGPTHTTTGSTYSAITTthSAPSplthTTTG 576
Cdd:pfam17823 47 VPRADNKSSEQ*NFCAATAAPAPvTLTKGTSAAHLNSTEVTAEHTPHGTDLSEPATREGAADGAAS--RALA----AAAS 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 577 STHKPIISTLTTTGPTLniigPVQTTTSPTHTMPSPTHTTASPTHTSTSPTHTPTSPTHKTSMSPPTTTSPTPSGMGLVQ 656
Cdd:pfam17823 121 SSPSSAAQSLPAAIAAL----PSEAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPT 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 657 TATSPTHPTTSPTHPTTSPILINVSPSTSLEL----------------------ATLSSPSKHSDPTLPGTDSLPCSPPV 714
Cdd:pfam17823 197 TAASSAPATLTPARGISTAATATGHPAAGTALaavgnsspaagtvtaavgtvtpAALATLAAAAGTVASAAGTINMGDPH 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 715 SNSYTQADPMAPRTPHPSPAHSSR-------------KPLTSPAPDPSESTVQSLSPTPSPPTPAPQHSDLCLAMAVQTP 781
Cdd:pfam17823 277 ARRLSPAKHMPSDTMARNPAAPMGaqaqgpiiqvstdQPVHNTAGEPTPSPSNTTLEPNTPKSVASTNLAVVTTTKAQAK 356
|
....*
gi 2462550775 782 VPTAA 786
Cdd:pfam17823 357 EPSAS 361
|
|
| HR1 |
cd00089 |
Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small ... |
141-203 |
7.40e-03 |
|
Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases; The HR1 domain, also called the ACC (anti-parallel coiled-coil) finger domain or Rho-binding domain binds small GTPases from the Rho family. It is found in Rho effector proteins including PKC-related kinases such as vertebrate PRK1 (or PKN) and yeast PKC1 protein kinases C, as well as in rhophilins and Rho-associated kinase (ROCK). Rho family members function as molecular switches, cycling between inactive and active forms, controlling a variety of cellular processes. HR1 domains may occur in repeat arrangements (PKN contains three HR1 domains), separated by a short linker region.
Pssm-ID: 212008 [Multi-domain] Cd Length: 68 Bit Score: 36.15 E-value: 7.40e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462550775 141 SKIDELYEAYCVQRRLRDGAYNMVRAYTTGspgsrEARDSLAEATRGHREYTESMCLLESELE 203
Cdd:cd00089 5 QRLEELRRKLEKELKIREGAENLLKLYSNP-----KVKKDLAEVQLNLKESKEKIDLLKRQLE 62
|
|
| Not5 |
COG5665 |
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription]; |
425-615 |
8.90e-03 |
|
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];
Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 40.42 E-value: 8.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 425 TPSSGPLDEEGAVAPVLANGHAPYSRTLSHISEASVDAA--LAEASVEAVGPESLAWGPSPPTHPAPTHGEHPSPVPPAL 502
Cdd:COG5665 245 TPPATPATEEKSSQQPKSQPTSPSGGTTPPSTNQLTTSNtpTSTAKAQPQPPTKKQPAKEPPSDTASGNPSAPSVLINSD 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 503 DPGHSATS-STLGTTGSVPTSTDPAPSAHLDSVHKSTDSGPSELPGPTHTTTGSTYSAitTTHSAPSPLTHTTTGSTHKP 581
Cdd:COG5665 325 SPTSEDPAtASVPTTEETTAFTTPSSVPSTPAEKDTPATDLATPVSPTPPETSVDKKV--SPDSATSSTKSEKEGGTASS 402
|
170 180 190
....*....|....*....|....*....|....
gi 2462550775 582 IISTLTTTGptlniigpvqTTTSPTHTMPSPTHT 615
Cdd:COG5665 403 PMPPNIAIG----------AKDDVDATDPSQEAK 426
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
485-616 |
9.70e-03 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 40.03 E-value: 9.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462550775 485 THPAPTHGEHP---SPVPPALDP---GHSATSST--LGTTGSVPTSTDPapsahldsvhKSTDSGPSELPGPthtttgST 556
Cdd:pfam05539 177 TTSWPTEVSHPtypSQVTPQSQPatqGHQTATANqrLSSTEPVGTQGTT----------TSSNPEPQTEPPP------SQ 240
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462550775 557 YSAITTTHSAPSPLTH-TTTGSTHKPIISTLTTTGPTLNIIGPVQTTTSPTHT--------MPSPTHTT 616
Cdd:pfam05539 241 RGPSGSPQHPPSTTSQdQSTTGDGQEHTQRRKTPPATSNRRSPHSTATPPPTTkrqetgrpTPRPTATT 309
|
|
| |
