ankyrin repeat and fibronectin type-III domain-containing protein 1 isoform X1 [Homo sapiens]
List of domain hits
Name | Accession | Description | Interval | E-value | |||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
292-385 | 1.37e-12 | |||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. : Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 64.83 E-value: 1.37e-12
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ANKYR super family | cl34000 | Ankyrin repeat [Signal transduction mechanisms]; |
155-219 | 5.04e-07 | |||
Ankyrin repeat [Signal transduction mechanisms]; The actual alignment was detected with superfamily member COG0666: Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 52.65 E-value: 5.04e-07
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Name | Accession | Description | Interval | E-value | |||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
292-385 | 1.37e-12 | |||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 64.83 E-value: 1.37e-12
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fn3 | pfam00041 | Fibronectin type III domain; |
295-378 | 2.25e-12 | |||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 63.59 E-value: 2.25e-12
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
292-377 | 1.65e-10 | |||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 58.39 E-value: 1.65e-10
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ANKYR | COG0666 | Ankyrin repeat [Signal transduction mechanisms]; |
155-219 | 5.04e-07 | |||
Ankyrin repeat [Signal transduction mechanisms]; Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 52.65 E-value: 5.04e-07
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Ank_2 | pfam12796 | Ankyrin repeats (3 copies); |
158-219 | 3.44e-05 | |||
Ankyrin repeats (3 copies); Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 43.57 E-value: 3.44e-05
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FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
291-372 | 7.32e-04 | |||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 43.84 E-value: 7.32e-04
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Name | Accession | Description | Interval | E-value | |||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
292-385 | 1.37e-12 | |||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 64.83 E-value: 1.37e-12
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fn3 | pfam00041 | Fibronectin type III domain; |
295-378 | 2.25e-12 | |||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 63.59 E-value: 2.25e-12
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
292-377 | 1.65e-10 | |||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 58.39 E-value: 1.65e-10
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ANKYR | COG0666 | Ankyrin repeat [Signal transduction mechanisms]; |
155-219 | 5.04e-07 | |||
Ankyrin repeat [Signal transduction mechanisms]; Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 52.65 E-value: 5.04e-07
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ANKYR | COG0666 | Ankyrin repeat [Signal transduction mechanisms]; |
155-219 | 2.62e-06 | |||
Ankyrin repeat [Signal transduction mechanisms]; Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 50.72 E-value: 2.62e-06
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ANKYR | COG0666 | Ankyrin repeat [Signal transduction mechanisms]; |
154-219 | 5.61e-06 | |||
Ankyrin repeat [Signal transduction mechanisms]; Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 49.57 E-value: 5.61e-06
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Ank_2 | pfam12796 | Ankyrin repeats (3 copies); |
158-219 | 3.44e-05 | |||
Ankyrin repeats (3 copies); Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 43.57 E-value: 3.44e-05
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Ank_2 | pfam12796 | Ankyrin repeats (3 copies); |
162-215 | 2.70e-04 | |||
Ankyrin repeats (3 copies); Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 40.87 E-value: 2.70e-04
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Ank_4 | pfam13637 | Ankyrin repeats (many copies); |
158-215 | 2.74e-04 | |||
Ankyrin repeats (many copies); Pssm-ID: 372654 [Multi-domain] Cd Length: 54 Bit Score: 39.95 E-value: 2.74e-04
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FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
291-372 | 7.32e-04 | |||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 43.84 E-value: 7.32e-04
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FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
291-372 | 1.17e-03 | |||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 43.07 E-value: 1.17e-03
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ANKYR | COG0666 | Ankyrin repeat [Signal transduction mechanisms]; |
154-221 | 1.62e-03 | |||
Ankyrin repeat [Signal transduction mechanisms]; Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 41.86 E-value: 1.62e-03
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Blast search parameters | ||||
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