NCBI Conserved Domain Search

Conserved domains on [gi|2462553663|ref|XP_054171306|]

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centrosomal protein of 112 kDa isoform X11 [Homo sapiens]

Protein Classification

coiled-coil domain-containing protein( domain architecture ID 1000037)

coiled-coil domain-containing protein contains a region with alpha-helical coiled-coil sequence signatures that is being annotated by a variety of protein family models, not necessarily indicating family membership

Graphical summary

Zoom to residue level

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List of domain hits

Name

Accession

Description

Interval

E-value

Smc super family

cl34174

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...

5-528

7.87e-10

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];

The actual alignment was detected with superfamily member COG1196:

Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 61.88 E-value: 7.87e-10

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663   5 IKELEARVQQLTGEAENSNLQRQKLIQEKAELERCYQITCSELQEVKARRNTLHKEKDHLVNDYEQNMKLLQTKYDADIN 84
Cdd:COG1196   248 LEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAE 327

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  85 LLKQEHALSASKAS---------SMIEELEQNVCQLKQQLQESELQRKQQLRDQENKFQMEKSHLKHIYEKKAHDLQSE- 154
Cdd:COG1196   328 LEEELEELEEELEEleeeleeaeEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEe 407

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 155 LDKGKEDTQKKIHKFEEALKEKEEQLTRVTEVQRLQAQQADAALEEFKRQVELNSEKVYAEMKEQMEKVEADLTRSKSLR 234
Cdd:COG1196   408 AEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELA 487

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 235 EKQSKEflWQLEDIRQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSLVRDHEREIEN----LEKQLRAANMEHENQIQEF 310
Cdd:COG1196   488 EAAARL--LLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAalaaALQNIVVEDDEVAAAAIEY 565

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 311 KKRD----AQVIADMEAQVHKLREELINVNSQRKQQLVELGLLREEEKQRATREHEIVVNKLKAESEKMKIELKKTHAAE 386
Cdd:COG1196   566 LKAAkagrATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGR 645

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 387 temtlekanskLKQIEKEYTQKLAKSSQIIAELQTTISSLKEENSQQQLAAERRLQDVRQKFEDEKKQLIRDNDQAIKVL 466
Cdd:COG1196   646 -----------LREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEE 714

                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462553663 467 QDELENRSNQVRCAEKKLQHKELESQEQITYIRQEYETKLKGLMPASlRQELEDTISSLKSQ 528
Cdd:COG1196   715 ERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPD-LEELERELERLERE 775

Name

Accession

Description

Interval

E-value

Smc

COG1196

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...

5-528

7.87e-10

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 61.88 E-value: 7.87e-10

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663   5 IKELEARVQQLTGEAENSNLQRQKLIQEKAELERCYQITCSELQEVKARRNTLHKEKDHLVNDYEQNMKLLQTKYDADIN 84
Cdd:COG1196   248 LEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAE 327

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  85 LLKQEHALSASKAS---------SMIEELEQNVCQLKQQLQESELQRKQQLRDQENKFQMEKSHLKHIYEKKAHDLQSE- 154
Cdd:COG1196   328 LEEELEELEEELEEleeeleeaeEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEe 407

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 155 LDKGKEDTQKKIHKFEEALKEKEEQLTRVTEVQRLQAQQADAALEEFKRQVELNSEKVYAEMKEQMEKVEADLTRSKSLR 234
Cdd:COG1196   408 AEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELA 487

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 235 EKQSKEflWQLEDIRQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSLVRDHEREIEN----LEKQLRAANMEHENQIQEF 310
Cdd:COG1196   488 EAAARL--LLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAalaaALQNIVVEDDEVAAAAIEY 565

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 311 KKRD----AQVIADMEAQVHKLREELINVNSQRKQQLVELGLLREEEKQRATREHEIVVNKLKAESEKMKIELKKTHAAE 386
Cdd:COG1196   566 LKAAkagrATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGR 645

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 387 temtlekanskLKQIEKEYTQKLAKSSQIIAELQTTISSLKEENSQQQLAAERRLQDVRQKFEDEKKQLIRDNDQAIKVL 466
Cdd:COG1196   646 -----------LREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEE 714

                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462553663 467 QDELENRSNQVRCAEKKLQHKELESQEQITYIRQEYETKLKGLMPASlRQELEDTISSLKSQ 528
Cdd:COG1196   715 ERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPD-LEELERELERLERE 775

PTZ00121

MAEBL; Provisional

103-542

3.12e-07

MAEBL; Provisional

Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 53.61 E-value: 3.12e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  103 ELEQNVCQLKQQLQESELQRKQQLRDQENKFQMEKSHLKHIYEKKAHDLQSELDKGKEDTQKKIHKFEEALKEKEEQLTR 182
Cdd:PTZ00121  1299 EEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKK 1378

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  183 VTEVQRLQAQQADAAlEEFKRQVELNSEKVYAEMKEQMEKVEADLTRSKSLREKQSKEFLWQLEDIRQRYE-QQIVELKL 261
Cdd:PTZ00121  1379 KADAAKKKAEEKKKA-DEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEaKKKAEEAK 1457

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  262 EHEQEKTHLLQQHNAEKDSLVRDHEREIENLEKQLRAANMEHEnqiQEFKKRDAQVIADMEAQVHKLREELINVNSQRKQ 341
Cdd:PTZ00121  1458 KAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKAD---EAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAK 1534

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  342 QLVELGLLREEEKQRATREHEivvnKLKAESEKMKIELKKTHAAETEMTLEKAnSKLKQIEKEYTQKLAKSSQIIAELQT 421
Cdd:PTZ00121  1535 KADEAKKAEEKKKADELKKAE----ELKKAEEKKKAEEAKKAEEDKNMALRKA-EEAKKAEEARIEEVMKLYEEEKKMKA 1609

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  422 TiSSLKEENSQQQLAAERRLQDVRQKFEDEKKQLIRDNDQAIKVLQDELENRsnqVRCAEKKlqHKELESQEQITYIRQE 501
Cdd:PTZ00121  1610 E-EAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENK---IKAAEEA--KKAEEDKKKAEEAKKA 1683

                          410       420       430       440
                   ....*....|....*....|....*....|....*....|.
gi 2462553663  502 YETKLKGLMPASLRQELEDTISSLKSQVNFLQKRASILQEE 542
Cdd:PTZ00121  1684 EEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKA 1724

SMC_prok_B

TIGR02168

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...

15-334

1.82e-06

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]

Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 50.83 E-value: 1.82e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663   15 LTGEAENSNLQRQKLIQEKAELERCYQITCSELQEVKARRNTLHKEKDHLVNDYEQNMKLLQTKyDADINLLKQEhalsA 94
Cdd:TIGR02168  661 ITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEEL-SRQISALRKD----L 735

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663   95 SKASSMIEELEQNVCQLKQQLQESELQRKQQLRDQENKFQMEKSHlkhiyEKKAHDLQSELDKGKEDTQKKIHKFEEALK 174
Cdd:TIGR02168  736 ARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEA-----EAEIEELEAQIEQLKEELKALREALDELRA 810

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  175 EKEEQLTRVTEVQRLQAQQADAALEEFKRQVELNSEKvyAEMKEQMEKVEADLTRSKSLREKQSKEfLWQLEDIRQRYEQ 254
Cdd:TIGR02168  811 ELTLLNEEAANLRERLESLERRIAATERRLEDLEEQI--EELSEDIESLAAEIEELEELIEELESE-LEALLNERASLEE 887

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  255 QIVELKL----------EHEQEKTHLLQQHNAEKDSLVRDHER------EIENLEKQLRA-ANMEHENQIQEFKKRDAQv 317
Cdd:TIGR02168  888 ALALLRSeleelseelrELESKRSELRRELEELREKLAQLELRleglevRIDNLQERLSEeYSLTLEEAEALENKIEDD- 966

                          330
                   ....*....|....*..
gi 2462553663  318 IADMEAQVHKLREELIN 334
Cdd:TIGR02168  967 EEEARRRLKRLENKIKE 983

DUF5401

pfam17380

Family of unknown function (DUF5401); This is a family of unknown function found in ...

229-494

5.07e-05

Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.

Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 46.27 E-value: 5.07e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 229 RSKSLREKQSKEFLWQLEDIRQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSLV-RDHEREIENLEKQLraanmehENQI 307
Cdd:pfam17380 282 KAVSERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIyAEQERMAMEREREL-------ERIR 354

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 308 QEFKKRDAQVIADME--AQVHKLRE-ELINVNSQRKQQLVELGL-------LREEEKQRATREHEIVVNKLKAESEKMKI 377
Cdd:pfam17380 355 QEERKRELERIRQEEiaMEISRMRElERLQMERQQKNERVRQELeaarkvkILEEERQRKIQQQKVEMEQIRAEQEEARQ 434

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 378 ELKKTHAAETEMTLEkansKLKQIEKEYTQKLAKSSQIIAELQTTISSLKEENSQQQLAAERRLQDVRQKFEDEKKQLIR 457
Cdd:pfam17380 435 REVRRLEEERAREME----RVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIE 510

                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 2462553663 458 DNDQAiKVLQDELENRSNQVRCAEKKLQHKELESQEQ 494
Cdd:pfam17380 511 EERKR-KLLEKEMEERQKAIYEEERRREAEEERRKQQ 546

PspC_subgroup_1

NF033838

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...

194-506

1.43e-03

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.

Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 41.54 E-value: 1.43e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 194 ADAALEEFKRQVELNSEKVYAEMKEQMEKVeadltrskslREKQSKEFLWQLEDIRQRYEQQIVELKLEHEQEKT----- 268
Cdd:NF033838   52 GNESQKEHAKEVESHLEKILSEIQKSLDKR----------KHTQNVALNKKLSDIKTEYLYELNVLKEKSEAELTsktkk 121

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 269 ------HLLQQHNAEKDSLVRDHEREIENLEKQLRAANME-HENQIQEFKKRDAQVIADMEAQVHKLREELINVN---SQ 338
Cdd:NF033838  122 eldaafEQFKKDTLEPGKKVAEATKKVEEAEKKAKDQKEEdRRNYPTNTYKTLELEIAESDVEVKKAELELVKEEakePR 201

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 339 RKQQLVELGLLREEEKQRATREHEIVVNKLKAESEKMKIELKKTHAAETEMTLEKANSKLKQIEK----------EYTQK 408
Cdd:NF033838  202 DEEKIKQAKAKVESKKAEATRLEKIKTDREKAEEEAKRRADAKLKEAVEKNVATSEQDKPKRRAKrgvlgepatpDKKEN 281

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 409 LAKSSQIIAELQTTIS-SLKEEnsQQQLAAERRLQDVRQKFEDEKKQLIRD-NDQAIKVLQDELENRSNQVRCAEKKL-- 484
Cdd:NF033838  282 DAKSSDSSVGEETLPSpSLKPE--KKVAEAEKKVEEAKKKAKDQKEEDRRNyPTNTYKTLELEIAESDVKVKEAELELvk 359

                         330       340
                  ....*....|....*....|...
gi 2462553663 485 -QHKELESQEQITYIRQEYETKL 506
Cdd:NF033838  360 eEAKEPRNEEKIKQAKAKVESKK 382

Name

Accession

Description

Interval

E-value

Smc

COG1196

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...

5-528

7.87e-10

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 61.88 E-value: 7.87e-10

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663   5 IKELEARVQQLTGEAENSNLQRQKLIQEKAELERCYQITCSELQEVKARRNTLHKEKDHLVNDYEQNMKLLQTKYDADIN 84
Cdd:COG1196   248 LEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAE 327

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  85 LLKQEHALSASKAS---------SMIEELEQNVCQLKQQLQESELQRKQQLRDQENKFQMEKSHLKHIYEKKAHDLQSE- 154
Cdd:COG1196   328 LEEELEELEEELEEleeeleeaeEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEe 407

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 155 LDKGKEDTQKKIHKFEEALKEKEEQLTRVTEVQRLQAQQADAALEEFKRQVELNSEKVYAEMKEQMEKVEADLTRSKSLR 234
Cdd:COG1196   408 AEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELA 487

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 235 EKQSKEflWQLEDIRQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSLVRDHEREIEN----LEKQLRAANMEHENQIQEF 310
Cdd:COG1196   488 EAAARL--LLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAalaaALQNIVVEDDEVAAAAIEY 565

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 311 KKRD----AQVIADMEAQVHKLREELINVNSQRKQQLVELGLLREEEKQRATREHEIVVNKLKAESEKMKIELKKTHAAE 386
Cdd:COG1196   566 LKAAkagrATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGR 645

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 387 temtlekanskLKQIEKEYTQKLAKSSQIIAELQTTISSLKEENSQQQLAAERRLQDVRQKFEDEKKQLIRDNDQAIKVL 466
Cdd:COG1196   646 -----------LREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEE 714

                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462553663 467 QDELENRSNQVRCAEKKLQHKELESQEQITYIRQEYETKLKGLMPASlRQELEDTISSLKSQ 528
Cdd:COG1196   715 ERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPD-LEELERELERLERE 775

Smc

COG1196

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...

160-471

1.99e-08

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 57.25 E-value: 1.99e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 160 EDTQKKIHKFEEALKEKEEQLTRVtEVQRLQAQQADAALEEFK-RQVELNSEKvYAEMKEQMEKVEADLTRSKSLREKQS 238
Cdd:COG1196   182 EATEENLERLEDILGELERQLEPL-ERQAEKAERYRELKEELKeLEAELLLLK-LRELEAELEELEAELEELEAELEELE 259

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 239 KEF-LWQLEDIRQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSLVRDHEREIENLEKQLRAANMEHENQIQEfKKRDAQV 317
Cdd:COG1196   260 AELaELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEE-LEELEEE 338

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 318 IADMEAQVHKLREELINVNSQRKQQLVELGLLREEEKQRATREHEIVVNKLKAESEKMKIELKKTHAAETEMTLEKANSK 397
Cdd:COG1196   339 LEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLER 418

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462553663 398 LKQIEKEYTQKLAKSSQIIAELQTTISSLKEENSQQQLAAERRLQDVRQKFEDEKKQLIRDNDQAIKVLQDELE 471
Cdd:COG1196   419 LEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAAR 492

Smc

COG1196

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...

5-535

2.38e-08

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 56.87 E-value: 2.38e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663   5 IKELEARVQQLTGEAENSNLQRQKLIQEKAELErcyqitcSELQEVKARRNTLHKEKDHLVNDYEQNMKLLQtKYDADIN 84
Cdd:COG1196   234 LRELEAELEELEAELEELEAELEELEAELAELE-------AELEELRLELEELELELEEAQAEEYELLAELA-RLEQDIA 305

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  85 LLKQEHALSASKASSMIEELEQNVcQLKQQLQESELQRKQQLRDQENKFQMEKSHLKHIyEKKAHDLQSELDKGKEDTQK 164
Cdd:COG1196   306 RLEERRRELEERLEELEEELAELE-EELEELEEELEELEEELEEAEEELEEAEAELAEA-EEALLEAEAELAEAEEELEE 383

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 165 KIHKFEEALKEKEEQLTRVTEVQRLQA--QQADAALEEFKRQVELNSEKVYAEMKEQMEKVEADLTRSKSLREKQSKEFL 242
Cdd:COG1196   384 LAEELLEALRAAAELAAQLEELEEAEEalLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLE 463

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 243 WQLEDIRQ--RYEQQIVELKLEHEQEKTHLLQQHNAEKDSLVRDHE-REIENLEKQLRAANMEHENQIQEFKKRDAQVIA 319
Cdd:COG1196   464 LLAELLEEaaLLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGvKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAA 543

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 320 DMEAQVHKLRE------ELINVNSQRKQ--------QLVELGLLREEEKQRATREHEIVVNKLKAESEKMKIELKKTHAA 385
Cdd:COG1196   544 LAAALQNIVVEddevaaAAIEYLKAAKAgratflplDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLL 623

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 386 ETEMTLEKANSKLKQIEKEYTQKLAKS--SQIIAELQTTISSLKEENSQQQLAAERRLQDVRQKFEDEKKQLIRDNDQAI 463
Cdd:COG1196   624 GRTLVAARLEAALRRAVTLAGRLREVTleGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEE 703

                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462553663 464 KVLQDELENRSNQVRCAEKKLQHKELESQEQITYIRQEYETKLKGLMPASLRQELEDTISSLKSQVNFLQKR 535
Cdd:COG1196   704 EEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLERE 775

Smc

COG1196

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...

5-543

3.69e-08

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 56.48 E-value: 3.69e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663   5 IKELEARVQQLTGEAENSnLQRQKLIQEKAELERCYQItcSELQEVKARRNTLHKEKDHLVNDYEQNMKLLQTKyDADIN 84
Cdd:COG1196   195 LGELERQLEPLERQAEKA-ERYRELKEELKELEAELLL--LKLRELEAELEELEAELEELEAELEELEAELAEL-EAELE 270

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  85 LLKQEHALSASKASSMIEELEQNVCQLKQQLQESELQRKQQLRDQENKFQMEKShlkhiyekkahdlQSELDKGKEDTQK 164
Cdd:COG1196   271 ELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEE-------------LAELEEELEELEE 337

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 165 KIHKFEEALKEKEEQLTRVTEVQRLQAQQADAALEEFKRQVELNSEKVYAEMKEQMEKVEADLTRSKSLREKQskeflwQ 244
Cdd:COG1196   338 ELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEE------A 411

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 245 LEDIRQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSlvrdhEREIENLEKQLRAANMEHENQIQEFKKRDAQVIADMEAQ 324
Cdd:COG1196   412 LLERLERLEEELEELEEALAELEEEEEEEEEALEEA-----AEEEAELEEEEEALLELLAELLEEAALLEAALAELLEEL 486

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 325 VHKLREELINVNSQRKQQLVELGLLREEEKQRATREHEIVVNKLKAESEKMKIELKKTHAAETEMTLEKANSKLKQIEKE 404
Cdd:COG1196   487 AEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYL 566

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 405 YTQKLAKSSQIIAELQTTISSLKEENSQQQLAAERRLQDVRQKFEDEKKQLIRDNDQAIKVLQDELENRSNQVRCAEKKL 484
Cdd:COG1196   567 KAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRL 646

                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2462553663 485 QHKELESQEQITYIRQEYETKLKGLMPASLRQELEDTISSLKSQVNFLQKRASILQEEL 543
Cdd:COG1196   647 REVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEE 705

PTZ00121

MAEBL; Provisional

103-542

3.12e-07

MAEBL; Provisional

Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 53.61 E-value: 3.12e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  103 ELEQNVCQLKQQLQESELQRKQQLRDQENKFQMEKSHLKHIYEKKAHDLQSELDKGKEDTQKKIHKFEEALKEKEEQLTR 182
Cdd:PTZ00121  1299 EEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKK 1378

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  183 VTEVQRLQAQQADAAlEEFKRQVELNSEKVYAEMKEQMEKVEADLTRSKSLREKQSKEFLWQLEDIRQRYE-QQIVELKL 261
Cdd:PTZ00121  1379 KADAAKKKAEEKKKA-DEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEaKKKAEEAK 1457

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  262 EHEQEKTHLLQQHNAEKDSLVRDHEREIENLEKQLRAANMEHEnqiQEFKKRDAQVIADMEAQVHKLREELINVNSQRKQ 341
Cdd:PTZ00121  1458 KAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKAD---EAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAK 1534

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  342 QLVELGLLREEEKQRATREHEivvnKLKAESEKMKIELKKTHAAETEMTLEKAnSKLKQIEKEYTQKLAKSSQIIAELQT 421
Cdd:PTZ00121  1535 KADEAKKAEEKKKADELKKAE----ELKKAEEKKKAEEAKKAEEDKNMALRKA-EEAKKAEEARIEEVMKLYEEEKKMKA 1609

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  422 TiSSLKEENSQQQLAAERRLQDVRQKFEDEKKQLIRDNDQAIKVLQDELENRsnqVRCAEKKlqHKELESQEQITYIRQE 501
Cdd:PTZ00121  1610 E-EAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENK---IKAAEEA--KKAEEDKKKAEEAKKA 1683

                          410       420       430       440
                   ....*....|....*....|....*....|....*....|.
gi 2462553663  502 YETKLKGLMPASLRQELEDTISSLKSQVNFLQKRASILQEE 542
Cdd:PTZ00121  1684 EEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKA 1724

SMC_prok_B

TIGR02168

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...

15-334

1.82e-06

Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 50.83 E-value: 1.82e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663   15 LTGEAENSNLQRQKLIQEKAELERCYQITCSELQEVKARRNTLHKEKDHLVNDYEQNMKLLQTKyDADINLLKQEhalsA 94
Cdd:TIGR02168  661 ITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEEL-SRQISALRKD----L 735

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663   95 SKASSMIEELEQNVCQLKQQLQESELQRKQQLRDQENKFQMEKSHlkhiyEKKAHDLQSELDKGKEDTQKKIHKFEEALK 174
Cdd:TIGR02168  736 ARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEA-----EAEIEELEAQIEQLKEELKALREALDELRA 810

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  175 EKEEQLTRVTEVQRLQAQQADAALEEFKRQVELNSEKvyAEMKEQMEKVEADLTRSKSLREKQSKEfLWQLEDIRQRYEQ 254
Cdd:TIGR02168  811 ELTLLNEEAANLRERLESLERRIAATERRLEDLEEQI--EELSEDIESLAAEIEELEELIEELESE-LEALLNERASLEE 887

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  255 QIVELKL----------EHEQEKTHLLQQHNAEKDSLVRDHER------EIENLEKQLRA-ANMEHENQIQEFKKRDAQv 317
Cdd:TIGR02168  888 ALALLRSeleelseelrELESKRSELRRELEELREKLAQLELRleglevRIDNLQERLSEeYSLTLEEAEALENKIEDD- 966

                          330
                   ....*....|....*..
gi 2462553663  318 IADMEAQVHKLREELIN 334
Cdd:TIGR02168  967 EEEARRRLKRLENKIKE 983

Smc

COG1196

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...

4-471

1.23e-05

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 48.39 E-value: 1.23e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663   4 MIKELEARVQQLTGEAENSNLQRQKLIQEKAELERCYQITCSELQEVKARRNTLHKEKDHLVNDYEQNMKLLQTKYDADI 83
Cdd:COG1196   310 RRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELL 389

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  84 NLLKQEhalsaskassmiEELEQNVCQLKQQLQESELQRKQQLRDQENKFQMEKSHLKHIYEKKAHDLQSELDKGKEDTQ 163
Cdd:COG1196   390 EALRAA------------AELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEE 457

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 164 KKIHKFEEALKEKEEQLTRVTEVQRLQAQQADAALEEFKRQVELNSEKVYAEMKEQMEKVEAD-LTRSKSLREKQSKEFL 242
Cdd:COG1196   458 EEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRgLAGAVAVLIGVEAAYE 537

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 243 WQLEDIRQRYEQQIVELKLEHEQEKTHLLQQHNA--------EKDSLVRDHEREIENLEKQLRAANMEHENQIQEFKKRD 314
Cdd:COG1196   538 AALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAgratflplDKIRARAALAAALARGAIGAAVDLVASDLREADARYYV 617

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 315 AQVIADMEAQVHKLREELINVNSQRKQQLVELGLLREEEKQRATREHEIVVNKLKAESEKMKIELKKTHAAETEMTLEKA 394
Cdd:COG1196   618 LGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEE 697

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462553663 395 nsklKQIEKEYTQKLAKSSQIIAELQTTISSLKEENSQQQLAAERRLQDVRQKFEDEKKQLIRDNDQAIKVLQDELE 471
Cdd:COG1196   698 ----ALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELE 770

PRK00409

recombination and DNA strand exchange inhibitor protein; Reviewed

174-394

1.28e-05

recombination and DNA strand exchange inhibitor protein; Reviewed

Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 48.28 E-value: 1.28e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 174 KEKEEQLTRVTEVQRLQAQQADAALEEFKRQVelnsEKVYAEMKEQMEKVEAdltRSKSLREKQskeflwqlediRQRYE 253
Cdd:PRK00409  515 KEKLNELIASLEELERELEQKAEEAEALLKEA----EKLKEELEEKKEKLQE---EEDKLLEEA-----------EKEAQ 576

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 254 QQIVELKLEHEQEKTHLLQQHNAEKDSLVrdhEREIENLEKQLRAANMEHENQIQEFKKRDAQVIADMEAQVHKLRE--E 331
Cdd:PRK00409  577 QAIKEAKKEADEIIKELRQLQKGGYASVK---AHELIEARKRLNKANEKKEKKKKKQKEKQEELKVGDEVKYLSLGQkgE 653

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462553663 332 LINVNSQRKQQL--------VELGLLREEEKQRATREHEIVVNKLKAESEKMKIELKKTHAAETEMTLEKA 394
Cdd:PRK00409  654 VLSIPDDKEAIVqagimkmkVPLSDLEKIQKPKKKKKKKPKTVKPKPRTVSLELDLRGMRYEEALERLDKY 724

PTZ00121

MAEBL; Provisional

119-505

1.42e-05

MAEBL; Provisional

Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.21 E-value: 1.42e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  119 ELQRKQQLRDQENKFQMEKSHLKHIYEKKAhdlqSELDKGKEDTQKKihkfEEALKEKEEQLTRVTEVQRLQAQQADAAL 198
Cdd:PTZ00121  1288 EKKKADEAKKAEEKKKADEAKKKAEEAKKA----DEAKKKAEEAKKK----ADAAKKKAEEAKKAAEAAKAEAEAAADEA 1359

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  199 EEFKRQVELnsekvyAEMKEQMEKVEADLTRSKSLREKQSKEFLWQLEDIRQRYEqqivELKLEHEQEKthllqqhNAEK 278
Cdd:PTZ00121  1360 EAAEEKAEA------AEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKAD----ELKKAAAAKK-------KADE 1422

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  279 DSLVRDHEREIENLEKQLRAANMEHENQIQEFKKRDAQVIADMEAQVHKLREELINVNSQRKQQlvELGLLREEEKQRAT 358
Cdd:PTZ00121  1423 AKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKAD--EAKKKAEEAKKKAD 1500

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  359 REHEIVVNKLKAESEKMKIELKKTHAAETEMTLEKANSKLKQIEKEYTQKLAKSSQIIAELQTTISSLKEENSQQQLAAE 438
Cdd:PTZ00121  1501 EAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMAL 1580

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462553663  439 RRLQDVRQKFEDEKKQLIRDNDQAIKVLQDELENRSNQVRCAEKKLQHKELESQEQITYIRQEYETK 505
Cdd:PTZ00121  1581 RKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKK 1647

SMC_prok_B

TIGR02168

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...

210-505

4.73e-05

Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 46.59 E-value: 4.73e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  210 EKVYAEMKEQMEKVEADLTRSKSLREKQSKEFLWQLEDIRQRYEQQivelkleheQEKTHLLQQHNAEKDSLVRDHEREI 289
Cdd:TIGR02168  192 EDILNELERQLKSLERQAEKAERYKELKAELRELELALLVLRLEEL---------REELEELQEELKEAEEELEELTAEL 262

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  290 ENLEKQ---LRAANMEHENQIQEFKKR---DAQVIADMEAQVHKLREELINVNSQRKQQLVELGLL--REEEKQRATREH 361
Cdd:TIGR02168  263 QELEEKleeLRLEVSELEEEIEELQKElyaLANEISRLEQQKQILRERLANLERQLEELEAQLEELesKLDELAEELAEL 342

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  362 EIVVNKLKAESEKMKIELKkthaaETEMTLEKANSKLKQIEKEYTQKLAKSSQI---IAELQTTISSLKEENSQQQLAAE 438
Cdd:TIGR02168  343 EEKLEELKEELESLEAELE-----ELEAELEELESRLEELEEQLETLRSKVAQLelqIASLNNEIERLEARLERLEDRRE 417

                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  439 RRLQ---DVRQKFEDEKKQLIRDNDQAIKVLQDELENRSNQVRCAEKKLQHKELESQEQITYIRQEYETK 505
Cdd:TIGR02168  418 RLQQeieELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQL 487

DUF5401

pfam17380

Family of unknown function (DUF5401); This is a family of unknown function found in ...

229-494

5.07e-05

Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.

Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 46.27 E-value: 5.07e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 229 RSKSLREKQSKEFLWQLEDIRQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSLV-RDHEREIENLEKQLraanmehENQI 307
Cdd:pfam17380 282 KAVSERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIyAEQERMAMEREREL-------ERIR 354

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 308 QEFKKRDAQVIADME--AQVHKLRE-ELINVNSQRKQQLVELGL-------LREEEKQRATREHEIVVNKLKAESEKMKI 377
Cdd:pfam17380 355 QEERKRELERIRQEEiaMEISRMRElERLQMERQQKNERVRQELeaarkvkILEEERQRKIQQQKVEMEQIRAEQEEARQ 434

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 378 ELKKTHAAETEMTLEkansKLKQIEKEYTQKLAKSSQIIAELQTTISSLKEENSQQQLAAERRLQDVRQKFEDEKKQLIR 457
Cdd:pfam17380 435 REVRRLEEERAREME----RVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIE 510

                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 2462553663 458 DNDQAiKVLQDELENRSNQVRCAEKKLQHKELESQEQ 494
Cdd:pfam17380 511 EERKR-KLLEKEMEERQKAIYEEERRREAEEERRKQQ 546

PTZ00121

MAEBL; Provisional

87-507

6.22e-05

MAEBL; Provisional

Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.29 E-value: 6.22e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663   87 KQEHALSASKASSMIEELEQNVCQLKQQLQESELQRKQQLRDQENKFQMEKSHLKhiyEKKAHDLQSELDKGKEDTQKK- 165
Cdd:PTZ00121  1310 KAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEE---KAEAAEKKKEEAKKKADAAKKk 1386

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  166 ---IHKFEEALKEKEEQLTRVTEVQRLQAQQADAalEEFKRQVElNSEKVYAEMKEQMEKVEADLTRSKSLREKQSKEFL 242
Cdd:PTZ00121  1387 aeeKKKADEAKKKAEEDKKKADELKKAAAAKKKA--DEAKKKAE-EKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAK 1463

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  243 WQLEDIRQRYE--------QQIVELKLEHEQEKTHLLQQHNAEKDSLVRDHEREIENLEKQLRAANMEHENQIQEFKKRD 314
Cdd:PTZ00121  1464 KKAEEAKKADEakkkaeeaKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAE 1543

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  315 AQVIADMEAQVHKLR--EELINVNSQRKQQ------LVELGLLREEEKQRATREHEIVVNKLKAESEKMKIELKKTHAAE 386
Cdd:PTZ00121  1544 EKKKADELKKAEELKkaEEKKKAEEAKKAEedknmaLRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAE 1623

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  387 TEMTLEKANSKLKQIEKEYTQKLAKSSQIIAELQTTI-------------------SSLKEENSQQQLAAERRLQDVRQK 447
Cdd:PTZ00121  1624 ELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKikaaeeakkaeedkkkaeeAKKAEEDEKKAAEALKKEAEEAKK 1703

                          410       420       430       440       450       460
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  448 FEDEKKQLIRDNDQAIKVLQDELENRSNQvrcaeKKLQHKELESQEQITYIRQEYETKLK 507
Cdd:PTZ00121  1704 AEELKKKEAEEKKKAEELKKAEEENKIKA-----EEAKKEAEEDKKKAEEAKKDEEEKKK 1758

SMC_prok_B

TIGR02168

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...

208-532

9.62e-05

Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 45.43 E-value: 9.62e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  208 NSEKVYAEMKEQMEKVEADLTRSKSLREKQSkEFLWQLEDIRQRYEQQIVELKLEHEQEKTHLLQQHNAEKDslVRDHER 287
Cdd:TIGR02168  678 EIEELEEKIEELEEKIAELEKALAELRKELE-ELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEER--IAQLSK 754

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  288 EIENLEKQlRAANMEHENQIQEFKKRDAQVIADMEAQVHKLREELINVNSQRKQQLVELGLLREeekqratrehEIVVNK 367
Cdd:TIGR02168  755 ELTELEAE-IEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNE----------EAANLR 823

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  368 LKAESEKMKIELKKTHAAETEMTLEKANSKLKQIEKEytqkLAKSSQIIAELQTTISSLKEENSQQQLAAERRLQDVRQK 447
Cdd:TIGR02168  824 ERLESLERRIAATERRLEDLEEQIEELSEDIESLAAE----IEELEELIEELESELEALLNERASLEEALALLRSELEEL 899

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  448 FEDekkqlIRDNDQAIKVLQDELENRSNQVRCAEKKLQHKELESQEQITYIRQEYETKLKGLMP-----ASLRQELEDTI 522
Cdd:TIGR02168  900 SEE-----LRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEAlenkiEDDEEEARRRL 974

                          330
                   ....*....|
gi 2462553663  523 SSLKSQVNFL 532
Cdd:TIGR02168  975 KRLENKIKEL 984

SMC_prok_B

TIGR02168

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...

10-549

1.16e-04

Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 45.05 E-value: 1.16e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663   10 ARVQQLTGEAENSNLQRQKLIQEKAELERCYQITCSELQEVKARRNTLHKEKDHLVNDYeQNMKLLQTKYDADINLLKQE 89
Cdd:TIGR02168  232 LRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKEL-YALANEISRLEQQKQILRER 310

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663   90 HALSASKASSMIEELEQNVCQLKQQLQESELQRKQQLRDQENKFQMEKSHlkhiyeKKAHDLQSELDKGKEDTQKKIHKF 169
Cdd:TIGR02168  311 LANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAEL------EELEAELEELESRLEELEEQLETL 384

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  170 EEALKEKEEQLtrvtEVQRLQAQQADAALEEFKRQVELNSEKVYAEMKEQMEKVEADLTRSKSLREKQSKEFLWQLEDIR 249
Cdd:TIGR02168  385 RSKVAQLELQI----ASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLE 460

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  250 QRYE--QQIVELKLEHEQEKTHLLQQHNAEKDSLVRDhEREIENLEKQLRAAnMEHENQIQEFKKRDAQVI---ADMEAQ 324
Cdd:TIGR02168  461 EALEelREELEEAEQALDAAERELAQLQARLDSLERL-QENLEGFSEGVKAL-LKNQSGLSGILGVLSELIsvdEGYEAA 538

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  325 VHKLREELIN--VNSQRKQQLVELGLLREEEKQRATREHEIVVNKLKAESEKMKIELKKTHAAETEMTLEK--------- 393
Cdd:TIGR02168  539 IEAALGGRLQavVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKfdpklrkal 618

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  394 ---------------ANSKLKQIEKEYT-----------------------QKLAKSSQIIAELQTTISSL--KEENSQQ 433
Cdd:TIGR02168  619 syllggvlvvddldnALELAKKLRPGYRivtldgdlvrpggvitggsaktnSSILERRREIEELEEKIEELeeKIAELEK 698

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  434 QLAAERRLQDVRQKFEDEKKQLIRDNDQAIKVLQDELENRSNQVRCAEKKLQHKELESQEQITYiRQEYETKLKGLMPA- 512
Cdd:TIGR02168  699 ALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAE-IEELEERLEEAEEEl 777

                          570       580       590       600
                   ....*....|....*....|....*....|....*....|.
gi 2462553663  513 ----SLRQELEDTISSLKSQVNFLQKRASILQEELTTYQGR 549
Cdd:TIGR02168  778 aeaeAEIEELEAQIEQLKEELKALREALDELRAELTLLNEE 818

COG4913

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];

192-429

1.79e-04

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];

Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.52 E-value: 1.79e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  192 QQADAALEEFKRqvelnsekvYAEMKEQMEKVEADLTRSKSLREKQSKefLWQLEDIRQRYEQQIVELKLEHEQEKTHLL 271
Cdd:COG4913    225 EAADALVEHFDD---------LERAHEALEDAREQIELLEPIRELAER--YAAARERLAELEYLRAALRLWFAQRRLELL 293

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  272 QQHNAEKDSLVRDHEREIENLEKQLRAANMEHENQIQEFKKRDAQVIADMEAQVHKLREELINVNSQRKQ---QLVELGL 348
Cdd:COG4913    294 EAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARleaLLAALGL 373

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  349 LREEEKQRATREHEivvnKLKAESEKMKIELKKTHAAETEM--TLEKANSKLKQIEKEYTQKLAKSSQIIAELQTTISSL 426
Cdd:COG4913    374 PLPASAEEFAALRA----EAAALLEALEEELEALEEALAEAeaALRDLRRELRELEAEIASLERRKSNIPARLLALRDAL 449


                   ...
gi 2462553663  427 KEE 429
Cdd:COG4913    450 AEA 452

PTZ00121

MAEBL; Provisional

59-472

2.13e-04

MAEBL; Provisional

Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.36 E-value: 2.13e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663   59 KEKDHLVNDYEQNMKLLQTKYDADINLLKQEHALSASKASSMIEElEQNVCQLKQQLQESELQRKQQLRDQENKFQMEKS 138
Cdd:PTZ00121  1424 KKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEE-AKKADEAKKKAEEAKKADEAKKKAEEAKKKADEA 1502

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  139 HLKHIYEKKAHDLQSELDKGKEDTQKKIHKfeealKEKEEQLTRVTEVQRLqaqqadaalEEFKRQVELNSEKvyaEMKE 218
Cdd:PTZ00121  1503 KKAAEAKKKADEAKKAEEAKKADEAKKAEE-----AKKADEAKKAEEKKKA---------DELKKAEELKKAE---EKKK 1565

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  219 QMEKVEADLTRSKSLRekqskeflwQLEDIRQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSLVRDHEREIENLEKQlra 298
Cdd:PTZ00121  1566 AEEAKKAEEDKNMALR---------KAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKK--- 1633

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  299 aNMEHENQIQEFKKRDAQVIADMEAQVHKLREELINVNSQRKQQLVELGLLREEEKQRATREHEIVVNKLKAESEKMKIE 378
Cdd:PTZ00121  1634 -KVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEA 1712

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  379 LKKTHAAETEMTLEKANSKLKQIEK--EYTQKLAKSSQIIAELQTTISSLKEENSQQQLAAERRLQDVRQKFEDEKKQLI 456
Cdd:PTZ00121  1713 EEKKKAEELKKAEEENKIKAEEAKKeaEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKR 1792

                          410
                   ....*....|....*..
gi 2462553663  457 R-DNDQAIKVLQDELEN 472
Cdd:PTZ00121  1793 RmEVDKKIKDIFDNFAN 1809

PTZ00121

MAEBL; Provisional

110-414

2.32e-04

MAEBL; Provisional

Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.36 E-value: 2.32e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  110 QLKQQLQESELQRKQQLRDQENKFQMEKSHLKHIYEKKAHDLQSELDKGKEDTQKKIHKFEEAlKEKEEQLTRVTEVQRL 189
Cdd:PTZ00121  1556 ELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEA-KIKAEELKKAEEEKKK 1634

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  190 QAQQADAALEEFKRQVELNSEKVYAEMKEQMEKVEADLTRSKSLREKQSKEFLWQLEDIRQRYEQQ---IVELKLEHEQE 266
Cdd:PTZ00121  1635 VEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEakkAEELKKKEAEE 1714

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  267 KTHLLQQHNAEKDSLVRDHEREIENLEKQLRAANMEHEnqiQEFKKRDAQVIADMEAQVHKLREELINVNSQRKQQLVEL 346
Cdd:PTZ00121  1715 KKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKD---EEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEK 1791

                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462553663  347 GLLREEEKQRATREHEIVVNKLKAESEKMKIELKKTHAAETEMTLEKANSKLKQIEKEYTQKLAKSSQ 414
Cdd:PTZ00121  1792 RRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLEEADAFEKHKFNKNNE 1859

PRK12704

phosphodiesterase; Provisional

112-266

2.38e-04

phosphodiesterase; Provisional

Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 44.00 E-value: 2.38e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 112 KQQLQESELQRKQQLRDQENKFQMEKSHLKHIYEKKAHDLQSELDKGKEDTQKKIHKFEEALKEKEEQLTRVTEVQRLQA 191
Cdd:PRK12704   30 EAKIKEAEEEAKRILEEAKKEAEAIKKEALLEAKEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENLDRKLELLEKRE 109

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462553663 192 QQADAALEEFKRQvELNSEKVYAEMKEQMEKVEADLTRSKSLREKQSKEFLwqLEDIRQRYEQQIVELKLEHEQE 266
Cdd:PRK12704  110 EELEKKEKELEQK-QQELEKKEEELEELIEEQLQELERISGLTAEEAKEIL--LEKVEEEARHEAAVLIKEIEEE 181

DUF5401

pfam17380

Family of unknown function (DUF5401); This is a family of unknown function found in ...

149-511

3.19e-04

Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.

Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 43.57 E-value: 3.19e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 149 HDLQSELDKGKEDTQKKIHKFE-EALKEKEEQLTRVTEVQRLQAQQADAALEEFKRQVEL--NSEKVYAEMKEQMEKVEA 225
Cdd:pfam17380 276 HIVQHQKAVSERQQQEKFEKMEqERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIyaEQERMAMERERELERIRQ 355

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 226 DlTRSKSLREKQSKEFLWQLEDIRQryeqqIVELKLEHEQEKTHLLQQHNAEKDSLVRDHEREIENLEKQLRAANMEHEN 305
Cdd:pfam17380 356 E-ERKRELERIRQEEIAMEISRMRE-----LERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQ 429

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 306 QiqEFKKRDAQVIADMEA-QVHKLREElinvNSQRKQQLVELGLLREEEKQRATREHEIVVNKLKAESEKMKIELKKTHA 384
Cdd:pfam17380 430 E--EARQREVRRLEEERArEMERVRLE----EQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEE 503

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 385 AETEMTLEKANSKLKQIEKEYTQKlakssqIIAELQTTISSLKEENSQQQLAAERRLQDVRQKFEDEKKQLirdndqaik 464
Cdd:pfam17380 504 RKQAMIEEERKRKLLEKEMEERQK------AIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRL--------- 568

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*...
gi 2462553663 465 vlqDELENRSNQVR-CAEKKLQHKELESQEQITYIRQEYETKLKGLMP 511
Cdd:pfam17380 569 ---EAMEREREMMRqIVESEKARAEYEATTPITTIKPIYRPRISEYQP 613

PRK00409

recombination and DNA strand exchange inhibitor protein; Reviewed

96-236

5.65e-04

recombination and DNA strand exchange inhibitor protein; Reviewed

Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 42.89 E-value: 5.65e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  96 KASSMIEELEQNVCQLKQQLQESELQRKQQLRDQENKFQ-MEKSHLKhiYEKKAHDLQSELDKGKEDTQKKIHK-FEEAL 173
Cdd:PRK00409  506 EAKKLIGEDKEKLNELIASLEELERELEQKAEEAEALLKeAEKLKEE--LEEKKEKLQEEEDKLLEEAEKEAQQaIKEAK 583

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462553663 174 KEKEEQLTRVTEVQRLQ-----AQQADAALEEFKRQVELNSEKVYAEMKEQMEKVEADLTRSKSLREK 236
Cdd:PRK00409  584 KEADEIIKELRQLQKGGyasvkAHELIEARKRLNKANEKKEKKKKKQKEKQEELKVGDEVKYLSLGQK 651

PRK01156

chromosome segregation protein; Provisional

15-501

8.71e-04

chromosome segregation protein; Provisional

Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 42.20 E-value: 8.71e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  15 LTGEAENSNLQRQKLIQEKAELERCYQITCSELQEVKARRNTLHKEKDHLVNDYEQNMKLLQTKydadiNLLKQEHALSA 94
Cdd:PRK01156  188 LEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMK-----NRYESEIKTAE 262

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  95 SKAsSMIEELEQNVCQLKQQLQESELQRKQQLRDQENKFQMEKSHLKHiYEKKAHDLQSELDKGKEDtqkkIHKFEEALK 174
Cdd:PRK01156  263 SDL-SMELEKNNYYKELEERHMKIINDPVYKNRNYINDYFKYKNDIEN-KKQILSNIDAEINKYHAI----IKKLSVLQK 336

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 175 EKEEQLTRVTEVQRLQAQQADAALEEFKRQVELNSekvYAEMKEQMEKVEADLTRSKSLREKQSKEFLWQLEDIRQRYEQ 254
Cdd:PRK01156  337 DYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKS---IESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNE 413

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 255 QIVELkleheQEKTHLLQQHNAEKDSLvRDHEREIENLEKQLRAANM-------EHENQIQEFKKRDAQVIADMEAQVHK 327
Cdd:PRK01156  414 INVKL-----QDISSKVSSLNQRIRAL-RENLDELSRNMEMLNGQSVcpvcgttLGEEKSNHIINHYNEKKSRLEEKIRE 487

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 328 LREELINVNSQRKQQLVELGLLREEEKQRATREHEIvVNKLKAESEKMKI---ELKKTHAAETEMTLEKANSKLKQIEKE 404
Cdd:PRK01156  488 IEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNK-IESARADLEDIKIkinELKDKHDKYEEIKNRYKSLKLEDLDSK 566

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 405 YTQKLAKSSQIIAELQTTISSLKEENSQQQLAAERRLQDVRQKFEDEKKQlirdNDQAIKVLQDELENRSNQVRCAEKKL 484
Cdd:PRK01156  567 RTSWLNALAVISLIDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSY----IDKSIREIENEANNLNNKYNEIQENK 642

                         490
                  ....*....|....*..
gi 2462553663 485 QHKElESQEQITYIRQE 501
Cdd:PRK01156  643 ILIE-KLRGKIDNYKKQ 658

CCDC158

pfam15921

Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ...

100-545

1.24e-03

Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.

Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 41.64 E-value: 1.24e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  100 MIEELEQNVCQLKQQLQES-ELQRKQQ---------LRDQENKFQMEKSHLKHIYEKKAhdlQSELDKgKEDTQKKIHKF 169
Cdd:pfam15921   79 VLEEYSHQVKDLQRRLNESnELHEKQKfylrqsvidLQTKLQEMQMERDAMADIRRRES---QSQEDL-RNQLQNTVHEL 154

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  170 EEALKEKEEQL----TRVTEVQRLQAQQaDAALEEFKRQVELNSEKVYAEMKEQMEKVEADLTRSKSLREKQSKEFLWQL 245
Cdd:pfam15921  155 EAAKCLKEDMLedsnTQIEQLRKMMLSH-EGVLQEIRSILVDFEEASGKKIYEHDSMSTMHFRSLGSAISKILRELDTEI 233

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  246 EDIRQR---YEQQIVELKLEHEQEKTHLLQQHNAEKDSLVRDHEREIENLEKQLRAANMEhENQIQefkkrdaqviadme 322
Cdd:pfam15921  234 SYLKGRifpVEDQLEALKSESQNKIELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQ-ANSIQ-------------- 298

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  323 AQVHKLREELINVNSQRKQQLVELgllreeekqratrehEIVVNKLKAESEKMKiELKKTHAAETEMTLEKANSKLKQIE 402
Cdd:pfam15921  299 SQLEIIQEQARNQNSMYMRQLSDL---------------ESTVSQLRSELREAK-RMYEDKIEELEKQLVLANSELTEAR 362

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  403 KEYTQKLAKSSQIIAELQTTISSLkeensqqqlaaERRLQDVRQKFEDEKKQLIRDNDQAIKV--LQDELENRSNQVRCA 480
Cdd:pfam15921  363 TERDQFSQESGNLDDQLQKLLADL-----------HKREKELSLEKEQNKRLWDRDTGNSITIdhLRRELDDRNMEVQRL 431

                          410       420       430       440       450       460
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2462553663  481 EKKLQHKELESQEQITYIRQEYETKLKGLMP-ASLRQELEDTISSLKSQVNFLQKRASILQEELTT 545
Cdd:pfam15921  432 EALLKAMKSECQGQMERQMAAIQGKNESLEKvSSLTAQLESTKEMLRKVVEELTAKKMTLESSERT 497

PspC_subgroup_1

NF033838

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...

194-506

1.43e-03

Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 41.54 E-value: 1.43e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 194 ADAALEEFKRQVELNSEKVYAEMKEQMEKVeadltrskslREKQSKEFLWQLEDIRQRYEQQIVELKLEHEQEKT----- 268
Cdd:NF033838   52 GNESQKEHAKEVESHLEKILSEIQKSLDKR----------KHTQNVALNKKLSDIKTEYLYELNVLKEKSEAELTsktkk 121

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 269 ------HLLQQHNAEKDSLVRDHEREIENLEKQLRAANME-HENQIQEFKKRDAQVIADMEAQVHKLREELINVN---SQ 338
Cdd:NF033838  122 eldaafEQFKKDTLEPGKKVAEATKKVEEAEKKAKDQKEEdRRNYPTNTYKTLELEIAESDVEVKKAELELVKEEakePR 201

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 339 RKQQLVELGLLREEEKQRATREHEIVVNKLKAESEKMKIELKKTHAAETEMTLEKANSKLKQIEK----------EYTQK 408
Cdd:NF033838  202 DEEKIKQAKAKVESKKAEATRLEKIKTDREKAEEEAKRRADAKLKEAVEKNVATSEQDKPKRRAKrgvlgepatpDKKEN 281

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 409 LAKSSQIIAELQTTIS-SLKEEnsQQQLAAERRLQDVRQKFEDEKKQLIRD-NDQAIKVLQDELENRSNQVRCAEKKL-- 484
Cdd:NF033838  282 DAKSSDSSVGEETLPSpSLKPE--KKVAEAEKKVEEAKKKAKDQKEEDRRNyPTNTYKTLELEIAESDVKVKEAELELvk 359

                         330       340
                  ....*....|....*....|...
gi 2462553663 485 -QHKELESQEQITYIRQEYETKL 506
Cdd:NF033838  360 eEAKEPRNEEKIKQAKAKVESKK 382

GumC

COG3206

Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];

151-369

1.86e-03

Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];

Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.16 E-value: 1.86e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 151 LQSELDKGKEDTQKKIHKFEEALKEKEEQLtrvtevqrlqaQQADAALEEFKRQ---VELNSE-----KVYAEMKEQMEK 222
Cdd:COG3206   162 LEQNLELRREEARKALEFLEEQLPELRKEL-----------EEAEAALEEFRQKnglVDLSEEaklllQQLSELESQLAE 230

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 223 VEADLTRSKSLR---EKQSKEFLWQLEDIR-----QRYEQQIVELKLEHEQEKTHLLQQHNAekdslVRDHEREIENLEK 294
Cdd:COG3206   231 ARAELAEAEARLaalRAQLGSGPDALPELLqspviQQLRAQLAELEAELAELSARYTPNHPD-----VIALRAQIAALRA 305

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462553663 295 QLRAANMEHENQIQEFKKRDAQVIADMEAQVHKLREELINVNSQRkQQLVELgllrEEEKQRATREHEIVVNKLK 369
Cdd:COG3206   306 QLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELE-AELRRL----EREVEVARELYESLLQRLE 375

PLN02939

transferase, transferring glycosyl groups

4-270

2.09e-03

transferase, transferring glycosyl groups

Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 41.04 E-value: 2.09e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663   4 MIKELEARVQQLTgEAENSNLQR-QKLIQEKAELERCYQITCSELQEVKARRNTLHKEKDHLVNDYEQNMKLLqtkydad 82
Cdd:PLN02939  136 MIQNAEKNILLLN-QARLQALEDlEKILTEKEALQGKINILEMRLSETDARIKLAAQEKIHVEILEEQLEKLR------- 207

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  83 iNLLKQEHALSASKASSMIEEL----EQNVcQLKQQLQESELQRKQQLRDQENKFQMEKSHlkHIYEKKAHDLQSELDKG 158
Cdd:PLN02939  208 -NELLIRGATEGLCVHSLSKELdvlkEENM-LLKDDIQFLKAELIEVAETEERVFKLEKER--SLLDASLRELESKFIVA 283

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 159 KEDTQKKIHKFEEALKEKEEQLTRVTEVQRLQAQQADAALE---EFKRQVE-----LNSEKVYAEMKEQMEKVEADLTRS 230
Cdd:PLN02939  284 QEDVSKLSPLQYDCWWEKVENLQDLLDRATNQVEKAALVLDqnqDLRDKVDkleasLKEANVSKFSSYKVELLQQKLKLL 363

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 2462553663 231 KSLREKQSKEFLWQLedirQRYEQQIVEL-----KLEHEQEKTHL 270
Cdd:PLN02939  364 EERLQASDHEIHSYI----QLYQESIKEFqdtlsKLKEESKKRSL 404

SMC_prok_A

TIGR02169

chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...

271-546

3.20e-03

chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]

Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 40.44 E-value: 3.20e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  271 LQQHNAEKDSLVRDHE------REIENLEKQLRAANMEHENQIQEFKKRDAQVIADMEAQVHKLREelinvnSQRKQQLV 344
Cdd:TIGR02169  676 LQRLRERLEGLKRELSslqselRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEE------LEEDLSSL 749

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  345 ELGLLREEEKQRatreheivvnKLKAESEKMKIELKKTHAAETEMTLEKANSKLKQIEKEYTQKLAKSSQIIAELQTTIS 424
Cdd:TIGR02169  750 EQEIENVKSELK----------ELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQ 819

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  425 SLKEENSQQQLAAERRlqdvrqkfeDEKKQLIRDNDQAIKVLQDELEN-----RSNQVRCAEKKLQHKELESQ-EQITYI 498
Cdd:TIGR02169  820 KLNRLTLEKEYLEKEI---------QELQEQRIDLKEQIKSIEKEIENlngkkEELEEELEELEAALRDLESRlGDLKKE 890

                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....*...
gi 2462553663  499 RQEYETKLKGLMPAslRQELEDTISSLKSQVNFLQKRASILQEELTTY 546
Cdd:TIGR02169  891 RDELEAQLRELERK--IEELEAQIEKKRKRLSELKAKLEALEEELSEI 936

PRK03918

DNA double-strand break repair ATPase Rad50;

9-529

3.34e-03

DNA double-strand break repair ATPase Rad50;

Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 40.43 E-value: 3.34e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663   9 EARVQQLTGEAENSNLQRQKLIQEKAELERcyqITCSELQEVKARRNTLHKEKDHLVNDYEQNMKLLQTKYDADINLLKQ 88
Cdd:PRK03918  188 TENIEELIKEKEKELEEVLREINEISSELP---ELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIREL 264

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  89 EHALSASKASsmIEELEQNVCQLKQQLQESELQRK-QQLRDQENKFQMEKSHLKHIYEKKAHDLQ-------------SE 154
Cdd:PRK03918  265 EERIEELKKE--IEELEEKVKELKELKEKAEEYIKlSEFYEEYLDELREIEKRLSRLEEEINGIEerikeleekeerlEE 342

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 155 LDKGKEDTQKKIHKFEEALKEKEEQLTRVTEVQRLQAQQADAALEEFKRQVElNSEKVYAEMKEQMEKVEADLTRSKSlR 234
Cdd:PRK03918  343 LKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPEKLEKELE-ELEKAKEEIEEEISKITARIGELKK-E 420

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 235 EKQSKEFLWQLEDIRQRYEQQIVELKLEHEQEkthLLQQHNAEKDSlVRDHEREIENLEKQLRAANMEHENQIQEFKKRD 314
Cdd:PRK03918  421 IKELKKAIEELKKAKGKCPVCGRELTEEHRKE---LLEEYTAELKR-IEKELKEIEEKERKLRKELRELEKVLKKESELI 496

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 315 AQviadmeaqvHKLREELINVnsqrKQQLVELGLLREEEKQRATREHEIVVNKLKAESEKMKIELKKTHA-----AETEM 389
Cdd:PRK03918  497 KL---------KELAEQLKEL----EEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEElkkklAELEK 563

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 390 TLEKANSKLKQIEKEYTQKLAKSsqiIAELQTTISSLKE--ENSQQQLAAERRLQDVRQKFEDEKKQL--IRDNDQAIKV 465
Cdd:PRK03918  564 KLDELEEELAELLKELEELGFES---VEELEERLKELEPfyNEYLELKDAEKELEREEKELKKLEEELdkAFEELAETEK 640

                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462553663 466 LQDELENRSNQVRCAEKKLQHKELEsqEQITYIRQEYETKLKGLMPA-SLRQELEDTISSLKSQV 529
Cdd:PRK03918  641 RLEELRKELEELEKKYSEEEYEELR--EEYLELSRELAGLRAELEELeKRREEIKKTLEKLKEEL 703

Smc

COG1196

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...

286-547

3.41e-03

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 40.31 E-value: 3.41e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 286 EREIENLEKQLRAAnMEHENQIQEFKKRDAQVIAdmeAQVHKLREELINVNSQRKQQLVELgllREEEKQRATREHEIVV 365
Cdd:COG1196   199 ERQLEPLERQAEKA-ERYRELKEELKELEAELLL---LKLRELEAELEELEAELEELEAEL---EELEAELAELEAELEE 271

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 366 NKLKAESEKMKIELKKTHAAETEMTLEKANSKL---KQIEKEYTQKLAKSSQIIAELQTTISSLKE---ENSQQQLAAER 439
Cdd:COG1196   272 LRLELEELELELEEAQAEEYELLAELARLEQDIarlEERRRELEERLEELEEELAELEEELEELEEeleELEEELEEAEE 351

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 440 RLQDVRQKFEDEKKQLIRDNDQAIKVLQDELENRSNQvrcAEKKLQHKELESQEQITYIRQEYETKLKGLMPASLRQELE 519
Cdd:COG1196   352 ELEEAEAELAEAEEALLEAEAELAEAEEELEELAEEL---LEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEE 428

                         250       260
                  ....*....|....*....|....*...
gi 2462553663 520 DTISSLKSQVNFLQKRASILQEELTTYQ 547
Cdd:COG1196   429 ALAELEEEEEEEEEALEEAAEEEAELEE 456

GumC

COG3206

Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];

319-549

3.61e-03

Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];

Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 40.00 E-value: 3.61e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 319 ADMEAQVHKLREELiNVNSQRKQQLVELGLlREEEKQRATReheiVVNKLKAESEKMKIELKKTHAAET----EMTLEKA 394
Cdd:COG3206   114 ASREAAIERLRKNL-TVEPVKGSNVIEISY-TSPDPELAAA----VANALAEAYLEQNLELRREEARKAleflEEQLPEL 187

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 395 NSKLKQIEKEYTQKLAKSSQIIAELQTTISSLK-EENSQQQLAAERRLQDVRQKFEDEKKQLIRDNDQAIKVLQDELENR 473
Cdd:COG3206   188 RKELEEAEAALEEFRQKNGLVDLSEEAKLLLQQlSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQSPVIQQ 267

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462553663 474 SNQvRCAEKKLQHKELESQEQITYIR-QEYETKLKGLMpASLRQELEDTISSLKSQVNFLQKRASILQEELTTYQGR 549
Cdd:COG3206   268 LRA-QLAELEAELAELSARYTPNHPDvIALRAQIAALR-AQLQQEAQRILASLEAELEALQAREASLQAQLAQLEAR 342

PRK05771

V-type ATP synthase subunit I; Validated

198-406

3.68e-03

V-type ATP synthase subunit I; Validated

Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 40.30 E-value: 3.68e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 198 LEEFKRQVELNSEKVYAEMKEQMEKVEadltrskslrekqskeflwQLEDIRQRYEQQIVELK--------LEHEQEKTH 269
Cdd:PRK05771   84 LEELIKDVEEELEKIEKEIKELEEEIS-------------------ELENEIKELEQEIERLEpwgnfdldLSLLLGFKY 144

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 270 LlqqhnaekdsLVRDHEREIENLEKQLRAANMEHENQIQEFKKRDAQVIADMEAQVHKLREELiNVNSQRKQQLVELGLL 349
Cdd:PRK05771  145 V----------SVFVGTVPEDKLEELKLESDVENVEYISTDKGYVYVVVVVLKELSDEVEEEL-KKLGFERLELEEEGTP 213

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462553663 350 RE------EEKQRATREHEIVVNKLKAESEKMKIELKKTHaAETEMTLEKANSKLKQIEKEYT 406
Cdd:PRK05771  214 SElireikEELEEIEKERESLLEELKELAKKYLEELLALY-EYLEIELERAEALSKFLKTDKT 275

PRK05771

V-type ATP synthase subunit I; Validated

339-547

3.97e-03

V-type ATP synthase subunit I; Validated

Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 39.91 E-value: 3.97e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 339 RKQQLVELGLLREEEK----QRATREHEIV---VNKLKAESEKMKI---ELKKTHAAETEMTLEKANSKLKQIEKEYTQK 408
Cdd:PRK05771   26 HELGVVHIEDLKEELSnerlRKLRSLLTKLseaLDKLRSYLPKLNPlreEKKKVSVKSLEELIKDVEEELEKIEKEIKEL 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663 409 LAKssqiIAELQTTISSLKEENSQQQ--------LAAERRLQDVRQKF----EDEKKQLIRDNDQAIKVLQDELENRSNQ 476
Cdd:PRK05771  106 EEE----ISELENEIKELEQEIERLEpwgnfdldLSLLLGFKYVSVFVgtvpEDKLEELKLESDVENVEYISTDKGYVYV 181

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462553663 477 VRCAEKKLQHKELESQEQITYIRQEYETKLKglmPASLRQELEDTISSLKSQVNFLQKRASILQEELTTYQ 547
Cdd:PRK05771  182 VVVVLKELSDEVEEELKKLGFERLELEEEGT---PSELIREIKEELEEIEKERESLLEELKELAKKYLEEL 249

SMC_prok_B

TIGR02168

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...

5-287

4.25e-03

Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 40.04 E-value: 4.25e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663    5 IKELEARVQQLTGEAENSNLQRQKLIQEKAELERCYQITCSELQEVKARRNTLHKEKDHlvndYEQNMKLLQTKYDadin 84
Cdd:TIGR02168  248 LKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQI----LRERLANLERQLE---- 319

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663   85 llkqehalsaskassMIEELEQNVCQLKQQLQESELQRKQQLRDQENKFQMEKSHLkhiyeKKAHDLQSELDKGKEDTQK 164
Cdd:TIGR02168  320 ---------------ELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAEL-----EELEAELEELESRLEELEE 379

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  165 KIHKFEEALKEKEEQLtrvtEVQRLQAQQADAALEEFKRQVELNSEKVYAEMKEQMEKVEADLTRSKSLREKQSKEFLWQ 244
Cdd:TIGR02168  380 QLETLRSKVAQLELQI----ASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEE 455

                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....*
gi 2462553663  245 LEDIRQRYE--QQIVELKLEHEQEKTHLLQQHNAEKDSLVRDHER 287
Cdd:TIGR02168  456 LERLEEALEelREELEEAEQALDAAERELAQLQARLDSLERLQEN 500

PTZ00108

DNA topoisomerase 2-like protein; Provisional

278-530

9.74e-03

DNA topoisomerase 2-like protein; Provisional

Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 38.87 E-value: 9.74e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  278 KDSLVRDHEREIENLEKQLRAANMEHENQIQEFKKRDAQVIADMEAQVHKLREELINVNSQRKQQLVELGLLREEEKQRA 357
Cdd:PTZ00108   997 KEYLLGKLERELARLSNKVRFIKHVINGELVITNAKKKDLVKELKKLGYVRFKDIIKKKSEKITAEEEEGAEEDDEADDE 1076

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  358 TREHEIV--------------------VNKLKAESEKMKIELKKTHAAETE-MTLEKANSKLKQIEKEYTQKLAKSSQII 416
Cdd:PTZ00108  1077 DDEEELGaavsydyllsmpiwsltkekVEKLNAELEKKEKELEKLKNTTPKdMWLEDLDKFEEALEEQEEVEEKEIAKEQ 1156

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462553663  417 AELQTTISSLKEENSQQQLAAERRlqdvrqkfedeKKQLIRDNDQAIKVLQDELENRSNQVRCAEKKLQHKELESQEQIT 496
Cdd:PTZ00108  1157 RLKSKTKGKASKLRKPKLKKKEKK-----------KKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQ 1225

                          250       260       270
                   ....*....|....*....|....*....|....
gi 2462553663  497 YIRQEYETKLKGlmPASLRQELEDTISSLKSQVN 530
Cdd:PTZ00108  1226 EDDEEQKTKPKK--SSVKRLKSKKNNSSKSSEDN 1257

Blast search parameters

Data Source:	Precalculated data, version = cdd.v.3.21
Preset Options:	Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01