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Conserved domains on  [gi|2462557545|ref|XP_054173174|]
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UNC93-like protein MFSD11 isoform X6 [Homo sapiens]

Protein Classification

MFS transporter( domain architecture ID 999995)

major facilitator superfamily (MFS) transporter facilitates the transport across cytoplasmic or internal membranes of one or more from a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides

CATH:  1.20.1250.20
Gene Ontology:  GO:0022857|GO:0055085
PubMed:  26758938|26098515
SCOP:  3000310
TCDB:  2.A.1

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS super family cl28910
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
19-248 3.00e-101

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


The actual alignment was detected with superfamily member cd17407:

Pssm-ID: 475125  Cd Length: 387  Bit Score: 303.41  E-value: 3.00e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462557545  19 ESDRRTVFIALTVISLVGTVLFFLIRKPDSENvlgedessddqdmevnesaqnnltkavdafkksfklcvtKEMLLLSIT 98
Cdd:cd17407   158 DHDRRTVFIVLTVISLVGVVLLFLLRKPPSEP---------------------------------------KEMLLLSVT 198
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462557545  99 TAYTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIGIGEILGGSLFGLLSKN-NRFGRNPVVLLGILVHFIAFYL 177
Cdd:cd17407   199 FAYTGLELTFFSGVYGTCIGNTNKFGEDAKSLIGLSGIFIGIGEILGGGLFGILGKKtNRFGRDPIVLLGFVVHLIAFYL 278
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462557545 178 IFLNMPGDAPIApvKGTDSSAYIKSSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFVQ 248
Cdd:cd17407   279 IFLNIPSDAPIA--EGTNDSAYIEPSAYVALFCSFLLGFGDSCFNTQIYSILGFMYPEDSAPAFALFKFVQ 347
 
Name Accession Description Interval E-value
MFS_MFSD11 cd17407
UNC93-like Major facilitator superfamily domain-containing protein 11; This group is composed ...
19-248 3.00e-101

UNC93-like Major facilitator superfamily domain-containing protein 11; This group is composed of UNC93-like protein MFSD11 (also called major facilitator superfamily domain-containing protein 11 or protein ET) and similar proteins, most of which are uncharacterized. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons. Its expression is affected by altered energy homeostasis, suggesting plausible involvement in the energy regulation. MFSD11 belongs to the Unc-93 family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340965  Cd Length: 387  Bit Score: 303.41  E-value: 3.00e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462557545  19 ESDRRTVFIALTVISLVGTVLFFLIRKPDSENvlgedessddqdmevnesaqnnltkavdafkksfklcvtKEMLLLSIT 98
Cdd:cd17407   158 DHDRRTVFIVLTVISLVGVVLLFLLRKPPSEP---------------------------------------KEMLLLSVT 198
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462557545  99 TAYTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIGIGEILGGSLFGLLSKN-NRFGRNPVVLLGILVHFIAFYL 177
Cdd:cd17407   199 FAYTGLELTFFSGVYGTCIGNTNKFGEDAKSLIGLSGIFIGIGEILGGGLFGILGKKtNRFGRDPIVLLGFVVHLIAFYL 278
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462557545 178 IFLNMPGDAPIApvKGTDSSAYIKSSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFVQ 248
Cdd:cd17407   279 IFLNIPSDAPIA--EGTNDSAYIEPSAYVALFCSFLLGFGDSCFNTQIYSILGFMYPEDSAPAFALFKFVQ 347
UNC-93 pfam05978
Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 ...
18-248 1.04e-75

Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 from Caenorhabditis elegans and also includes protein unc-93 homolog A (UNC93A), protein unc-93 homolog B1 (UNC93B1), and UNC93-like protein MFSD11 (also called major facilitator superfamily domain- containing protein 11 or protein ET). UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. UNC-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. UNC93B1 controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons.


Pssm-ID: 461792 [Multi-domain]  Cd Length: 379  Bit Score: 237.99  E-value: 1.04e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462557545  18 LESDRRTVFIALTVISLVGTVLFFLIRKPDSENVLGEDESSddqdmevnesaqnnlTKAVDAFKKSFKLCVTKEMLLLSI 97
Cdd:pfam05978 130 SDGQIKLLYSVFTAISIVGIVVFAFLPSPDYENVLSSKEKI---------------QSFADQFKSTFRLLRTPKMLLLAV 194
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462557545  98 TTAYTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIGIGEILGGSLFGLLSKNNR-FGRNPVVLLGILVHFIAFY 176
Cdd:pfam05978 195 FFFYTGLEVSFWTSIYPTCISFTSKLGTNTTYLIAIYSISTGLGQIIGGIFFGPLGKRIRkFGRDPTILLGTLLHLVYFI 274
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462557545 177 LIFLNMPGDAPIAPVKGtdSSAYIKSSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFVQ 248
Cdd:pfam05978 275 LIYLSFPNDAPLHPTDG--PGLLITPSLYLAFIISFLLGFSDACWNTQIYSILADAYPEDSSQAFAVFKFYQ 344
 
Name Accession Description Interval E-value
MFS_MFSD11 cd17407
UNC93-like Major facilitator superfamily domain-containing protein 11; This group is composed ...
19-248 3.00e-101

UNC93-like Major facilitator superfamily domain-containing protein 11; This group is composed of UNC93-like protein MFSD11 (also called major facilitator superfamily domain-containing protein 11 or protein ET) and similar proteins, most of which are uncharacterized. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons. Its expression is affected by altered energy homeostasis, suggesting plausible involvement in the energy regulation. MFSD11 belongs to the Unc-93 family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340965  Cd Length: 387  Bit Score: 303.41  E-value: 3.00e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462557545  19 ESDRRTVFIALTVISLVGTVLFFLIRKPDSENvlgedessddqdmevnesaqnnltkavdafkksfklcvtKEMLLLSIT 98
Cdd:cd17407   158 DHDRRTVFIVLTVISLVGVVLLFLLRKPPSEP---------------------------------------KEMLLLSVT 198
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462557545  99 TAYTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIGIGEILGGSLFGLLSKN-NRFGRNPVVLLGILVHFIAFYL 177
Cdd:cd17407   199 FAYTGLELTFFSGVYGTCIGNTNKFGEDAKSLIGLSGIFIGIGEILGGGLFGILGKKtNRFGRDPIVLLGFVVHLIAFYL 278
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462557545 178 IFLNMPGDAPIApvKGTDSSAYIKSSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFVQ 248
Cdd:cd17407   279 IFLNIPSDAPIA--EGTNDSAYIEPSAYVALFCSFLLGFGDSCFNTQIYSILGFMYPEDSAPAFALFKFVQ 347
UNC-93 pfam05978
Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 ...
18-248 1.04e-75

Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 from Caenorhabditis elegans and also includes protein unc-93 homolog A (UNC93A), protein unc-93 homolog B1 (UNC93B1), and UNC93-like protein MFSD11 (also called major facilitator superfamily domain- containing protein 11 or protein ET). UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. UNC-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. UNC93B1 controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons.


Pssm-ID: 461792 [Multi-domain]  Cd Length: 379  Bit Score: 237.99  E-value: 1.04e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462557545  18 LESDRRTVFIALTVISLVGTVLFFLIRKPDSENVLGEDESSddqdmevnesaqnnlTKAVDAFKKSFKLCVTKEMLLLSI 97
Cdd:pfam05978 130 SDGQIKLLYSVFTAISIVGIVVFAFLPSPDYENVLSSKEKI---------------QSFADQFKSTFRLLRTPKMLLLAV 194
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462557545  98 TTAYTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIGIGEILGGSLFGLLSKNNR-FGRNPVVLLGILVHFIAFY 176
Cdd:pfam05978 195 FFFYTGLEVSFWTSIYPTCISFTSKLGTNTTYLIAIYSISTGLGQIIGGIFFGPLGKRIRkFGRDPTILLGTLLHLVYFI 274
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462557545 177 LIFLNMPGDAPIAPVKGtdSSAYIKSSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFVQ 248
Cdd:pfam05978 275 LIYLSFPNDAPLHPTDG--PGLLITPSLYLAFIISFLLGFSDACWNTQIYSILADAYPEDSSQAFAVFKFYQ 344
MFS_unc93_like cd17338
Unc-93 family of the Major Facilitator Superfamily of transporters; The Unc-93 family is ...
20-248 1.54e-52

Unc-93 family of the Major Facilitator Superfamily of transporters; The Unc-93 family is composed of Caenorhabditis elegans uncoordinated protein 93 (also called putative potassium channel regulatory protein unc-93) and similar proteins including three vertebrate members: protein unc-93 homolog A (UNC93A), protein unc-93 homolog B1 (UNC93B1), and UNC93-like protein MFSD11 (also called major facilitator superfamily domain-containing protein 11 or protein ET). Unc-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. The human UNC93A gene is located in a region of the genome that is frequently associated with ovarian cancer, however, there is no evidence that UNC93A has a tumor suppressor function. UNC93B1 controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons. The unc93-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340896 [Multi-domain]  Cd Length: 388  Bit Score: 177.92  E-value: 1.54e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462557545  20 SDRRTVFIALTVISLVGTVLFFLIRKPDSENVLGEDESSDDQDMEVnesaqnnltkaVDAFKKSFKLCVTKEMLLLSITT 99
Cdd:cd17338   148 SGTTILFIVFMAIMLVGIILLFFLRGPDNEVITEIESSSVGESMEK-----------KNLFKLPFTLLKDKRFLLLIPLL 216
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462557545 100 AYTGLELTFFSGVYGTCIGATnkfgAEEKSLIGLSGIFIGIGEILGGSLFGLLSKNnRFGRNPVVLLGILVHFIAFYLIF 179
Cdd:cd17338   217 IYSGLEQTFFSGVFTLIIGTP----TTGIARVGYVMAVYGFGDALGSLVAGLLSDW-RFGRIVLAVIGAFVHIASLILLF 291
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462557545 180 LNMPGDAPIAPvkgtdssayiksSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFVQ 248
Cdd:cd17338   292 LSGNVTPYGLG------------GSWLAYVSAILWGLGDAIFNTQIYALLGSLYENDSESAFAVYKLWQ 348
MFS_unc93A_like cd17406
Protein unc-93 homolog A and similar proteins of the Major Facilitator Superfamily of ...
67-246 2.42e-06

Protein unc-93 homolog A and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of Caenorhabditis elegans Uncoordinated protein 93 (also called putative potassium channel regulatory protein unc-93), human protein unc-93 homolog A (HmUnc-93A or UNC93A), and similar proteins. Unc-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. The human UNC93A gene is located in a region of the genome that is frequently associated with ovarian cancer, however, there is no evidence that UNC93A has a tumor suppressor function. This unc93A-like subfamily belongs to the Unc-93 family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340964 [Multi-domain]  Cd Length: 390  Bit Score: 48.79  E-value: 2.42e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462557545  67 ESAQNNLTKAVDAFKKSFKLCVTKEMLLLSITTAYTGLELTFFSGVYG----TC-IGATNkfgaeekslIGLSGIFIGIG 141
Cdd:cd17406   189 KRKQETKFSVLSLLLATFKHLKDPRQLLLIPLTIYSGLEQAFLSGDFTksyvTCaLGIWN---------VGYVMICFGVV 259
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462557545 142 EILGGSLFGLLSKnnRFGRNPVVLLGILVHF---IAFYLIFLNmPGDapiapvkgtdssayiksskeVAILCSF--LLGL 216
Cdd:cd17406   260 NALCSFLFGRLVK--YTGRIPLFALGALVNLgliIALLLWEPD-PDQ--------------------LAIFFVFagLWGM 316
                         170       180       190
                  ....*....|....*....|....*....|
gi 2462557545 217 GDSCFNTQLLSILGFLYSEDSAPAFAIFKF 246
Cdd:cd17406   317 ADAVWQTQINALYGVLFPKNKEAAFSNYRL 346
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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