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POU domain, class 2, transcription factor 2 isoform X12 [Homo sapiens]
List of domain hits
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Name | Accession | Description | Interval | E-value | ||
POU | smart00352 | Found in Pit-Oct-Unc transcription factors; |
195-269 | 3.42e-47 | ||
Found in Pit-Oct-Unc transcription factors; : Pssm-ID: 197673 Cd Length: 75 Bit Score: 159.91 E-value: 3.42e-47
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Homeodomain | pfam00046 | Homeodomain; |
298-354 | 1.74e-21 | ||
Homeodomain; : Pssm-ID: 459649 [Multi-domain] Cd Length: 57 Bit Score: 87.94 E-value: 1.74e-21
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POU2F1_C super family | cl44948 | POU domain, class 2, transcription factor 1 C-terminal; This domain represents the C-terminal ... |
472-548 | 2.27e-20 | ||
POU domain, class 2, transcription factor 1 C-terminal; This domain represents the C-terminal region of the POU domain, class 2 subfamily, transcription factor 1, which is localized adjacent to the homeobox domain. This transcription factor activates the promoters of the genes for some small nuclear RNAs (snRNA) and of genes such as those for histone H2B and immunoglobulins. The actual alignment was detected with superfamily member pfam19536: Pssm-ID: 437368 Cd Length: 284 Bit Score: 91.46 E-value: 2.27e-20
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Name | Accession | Description | Interval | E-value | ||
POU | smart00352 | Found in Pit-Oct-Unc transcription factors; |
195-269 | 3.42e-47 | ||
Found in Pit-Oct-Unc transcription factors; Pssm-ID: 197673 Cd Length: 75 Bit Score: 159.91 E-value: 3.42e-47
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Pou | pfam00157 | Pou domain - N-terminal to homeobox domain; |
199-269 | 4.43e-42 | ||
Pou domain - N-terminal to homeobox domain; Pssm-ID: 459692 Cd Length: 72 Bit Score: 145.88 E-value: 4.43e-42
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Homeodomain | pfam00046 | Homeodomain; |
298-354 | 1.74e-21 | ||
Homeodomain; Pssm-ID: 459649 [Multi-domain] Cd Length: 57 Bit Score: 87.94 E-value: 1.74e-21
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POU2F1_C | pfam19536 | POU domain, class 2, transcription factor 1 C-terminal; This domain represents the C-terminal ... |
472-548 | 2.27e-20 | ||
POU domain, class 2, transcription factor 1 C-terminal; This domain represents the C-terminal region of the POU domain, class 2 subfamily, transcription factor 1, which is localized adjacent to the homeobox domain. This transcription factor activates the promoters of the genes for some small nuclear RNAs (snRNA) and of genes such as those for histone H2B and immunoglobulins. Pssm-ID: 437368 Cd Length: 284 Bit Score: 91.46 E-value: 2.27e-20
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HOX | smart00389 | Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key ... |
297-353 | 4.90e-17 | ||
Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key developmental processes Pssm-ID: 197696 [Multi-domain] Cd Length: 57 Bit Score: 75.36 E-value: 4.90e-17
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homeodomain | cd00086 | Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ... |
298-354 | 9.04e-17 | ||
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner. Pssm-ID: 238039 [Multi-domain] Cd Length: 59 Bit Score: 74.59 E-value: 9.04e-17
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COG5576 | COG5576 | Homeodomain-containing transcription factor [Transcription]; |
285-356 | 3.61e-11 | ||
Homeodomain-containing transcription factor [Transcription]; Pssm-ID: 227863 [Multi-domain] Cd Length: 156 Bit Score: 61.68 E-value: 3.61e-11
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Name | Accession | Description | Interval | E-value | ||
POU | smart00352 | Found in Pit-Oct-Unc transcription factors; |
195-269 | 3.42e-47 | ||
Found in Pit-Oct-Unc transcription factors; Pssm-ID: 197673 Cd Length: 75 Bit Score: 159.91 E-value: 3.42e-47
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Pou | pfam00157 | Pou domain - N-terminal to homeobox domain; |
199-269 | 4.43e-42 | ||
Pou domain - N-terminal to homeobox domain; Pssm-ID: 459692 Cd Length: 72 Bit Score: 145.88 E-value: 4.43e-42
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Homeodomain | pfam00046 | Homeodomain; |
298-354 | 1.74e-21 | ||
Homeodomain; Pssm-ID: 459649 [Multi-domain] Cd Length: 57 Bit Score: 87.94 E-value: 1.74e-21
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POU2F1_C | pfam19536 | POU domain, class 2, transcription factor 1 C-terminal; This domain represents the C-terminal ... |
472-548 | 2.27e-20 | ||
POU domain, class 2, transcription factor 1 C-terminal; This domain represents the C-terminal region of the POU domain, class 2 subfamily, transcription factor 1, which is localized adjacent to the homeobox domain. This transcription factor activates the promoters of the genes for some small nuclear RNAs (snRNA) and of genes such as those for histone H2B and immunoglobulins. Pssm-ID: 437368 Cd Length: 284 Bit Score: 91.46 E-value: 2.27e-20
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HOX | smart00389 | Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key ... |
297-353 | 4.90e-17 | ||
Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key developmental processes Pssm-ID: 197696 [Multi-domain] Cd Length: 57 Bit Score: 75.36 E-value: 4.90e-17
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homeodomain | cd00086 | Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ... |
298-354 | 9.04e-17 | ||
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner. Pssm-ID: 238039 [Multi-domain] Cd Length: 59 Bit Score: 74.59 E-value: 9.04e-17
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COG5576 | COG5576 | Homeodomain-containing transcription factor [Transcription]; |
285-356 | 3.61e-11 | ||
Homeodomain-containing transcription factor [Transcription]; Pssm-ID: 227863 [Multi-domain] Cd Length: 156 Bit Score: 61.68 E-value: 3.61e-11
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Blast search parameters | ||||
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