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Conserved domains on  [gi|2462570427|ref|XP_054196659|]
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ankyrin and armadillo repeat-containing protein isoform X17 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
526-696 1.08e-19

Ankyrin repeat [Signal transduction mechanisms];


:

Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 90.40  E-value: 1.08e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427 526 INVSDEAGYTIFHHAALHNRVSIICQLCNANFKVNQRrfvtFSQGPTPLHLAAQACSLETTVCLLCSKADYTLSEKRGWM 605
Cdd:COG0666    80 INAKDDGGNTLLHAAARNGDLEIVKLLLEAGADVNAR----DKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDGNT 155

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427 606 PIHFAAFYDNVCIIIAlcrkdpsLLEA----EATAENQCTPLLLAATSGALDTIQYLFSIGANWRKTDIKGNNIIHLSVL 681
Cdd:COG0666   156 PLHLAAANGNLEIVKL-------LLEAgadvNARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDNDGKTALDLAAE 228

                         170
                  ....*....|....*
gi 2462570427 682 TFHTEVLKYIIKLNI 696
Cdd:COG0666   229 NGNLEIVKLLLEAGA 243
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 731-771 6.09e-06

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


:

Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 43.60  E-value: 6.09e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 2462570427 731 NDQYWRCILDAGTIPALINLLKSSKIKLQCKTVGLLSNIST 771
Cdd:pfam00514   1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLAA 41
SRP1 super family cl34886
Karyopherin (importin) alpha [Intracellular trafficking and secretion];
686-823 1.67e-04

Karyopherin (importin) alpha [Intracellular trafficking and secretion];


The actual alignment was detected with superfamily member COG5064:

Pssm-ID: 227396 [Multi-domain]  Cd Length: 526  Bit Score: 45.27  E-value: 1.67e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427 686 EVLKYIIKLNIPelpvwKTLVEMLQCESYKRRMMAVMSLEVICLANDQYWRCILDAGTIPALINLLKSSKIKLQCKTVGL 765
Cdd:COG5064   276 EKIQAVLDVGIP-----GRLVELLSHESAKIQTPALRSVGNIVTGSDDQTQVIINCGALKAFRSLLSSPKENIRKEACWT 350

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427 766 LSNIST-HKSAVHALVEAGGIPSLINLLVCDEPEVHSR-CAVILYDIAQCENKDVIAKYM 823
Cdd:COG5064   351 ISNITAgNTEQIQAVIDANLIPPLIHLLSSAEYKIKKEaCWAISNATSGGLNRPDIIRYL 410
 
Name Accession Description Interval E-value
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
526-696 1.08e-19

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 90.40  E-value: 1.08e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427 526 INVSDEAGYTIFHHAALHNRVSIICQLCNANFKVNQRrfvtFSQGPTPLHLAAQACSLETTVCLLCSKADYTLSEKRGWM 605
Cdd:COG0666    80 INAKDDGGNTLLHAAARNGDLEIVKLLLEAGADVNAR----DKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDGNT 155

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427 606 PIHFAAFYDNVCIIIAlcrkdpsLLEA----EATAENQCTPLLLAATSGALDTIQYLFSIGANWRKTDIKGNNIIHLSVL 681
Cdd:COG0666   156 PLHLAAANGNLEIVKL-------LLEAgadvNARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDNDGKTALDLAAE 228

                         170
                  ....*....|....*
gi 2462570427 682 TFHTEVLKYIIKLNI 696
Cdd:COG0666   229 NGNLEIVKLLLEAGA 243
Ank_2 pfam12796
Ankyrin repeats (3 copies);
574-669 6.76e-10

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 56.66  E-value: 6.76e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427 574 LHLAAQACSLETTVCLLCSKADYTLSEKRGWMPIHFAAFYDNVCIIIALCRKDPSLLEaeataENQCTPLLLAATSGALD 653
Cdd:pfam12796   1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEHADVNLK-----DNGRTALHYAARSGHLE 75

                          90
                  ....*....|....*.
gi 2462570427 654 TIQYLFSIGANWRKTD 669
Cdd:pfam12796  76 IVKLLLEKGADINVKD 91
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 731-771 6.09e-06

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 43.60  E-value: 6.09e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 2462570427 731 NDQYWRCILDAGTIPALINLLKSSKIKLQCKTVGLLSNIST 771
Cdd:pfam00514   1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLAA 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 738-770 4.12e-05

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 41.26  E-value: 4.12e-05
                           10        20        30
                   ....*....|....*....|....*....|...
gi 2462570427  738 ILDAGTIPALINLLKSSKIKLQCKTVGLLSNIS 770
Cdd:smart00185   8 VVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
SRP1 COG5064
Karyopherin (importin) alpha [Intracellular trafficking and secretion];
686-823 1.67e-04

Karyopherin (importin) alpha [Intracellular trafficking and secretion];


Pssm-ID: 227396 [Multi-domain]  Cd Length: 526  Bit Score: 45.27  E-value: 1.67e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427 686 EVLKYIIKLNIPelpvwKTLVEMLQCESYKRRMMAVMSLEVICLANDQYWRCILDAGTIPALINLLKSSKIKLQCKTVGL 765
Cdd:COG5064   276 EKIQAVLDVGIP-----GRLVELLSHESAKIQTPALRSVGNIVTGSDDQTQVIINCGALKAFRSLLSSPKENIRKEACWT 350

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427 766 LSNIST-HKSAVHALVEAGGIPSLINLLVCDEPEVHSR-CAVILYDIAQCENKDVIAKYM 823
Cdd:COG5064   351 ISNITAgNTEQIQAVIDANLIPPLIHLLSSAEYKIKKEaCWAISNATSGGLNRPDIIRYL 410
PHA02875 PHA02875
ankyrin repeat protein; Provisional
 537-664 1.73e-04

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 44.98  E-value: 1.73e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427 537 FHHAALHNRVSIICQLCNANFKVNQrrfVTFSQGPTPLHLAAQACSLETTVCLLCSKADYTLSEKRGWMPIHFAAFYDNV 616
Cdd:PHA02875   72 LHDAVEEGDVKAVEELLDLGKFADD---VFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDI 148

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2462570427 617 CIIialcrkdPSLLEAEATAENQ----CTPLLLAATSGALDTIQYLFSIGAN 664
Cdd:PHA02875  149 KGI-------ELLIDHKACLDIEdccgCTPLIIAMAKGDIAICKMLLDSGAN 193
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 710-792 5.96e-03

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 40.47  E-value: 5.96e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427  710 QCESYKRRMMAVMSLEViclaNDQYWrCILDAGTIPALINLLKSSKIKLQCKTVGLLSNISTHKSAVHALVE-AGGIPSL 788
Cdd:PLN03200   461 QQQEYAVALLAILTDEV----DESKW-AITAAGGIPPLVQLLETGSQKAKEDSATVLWNLCCHSEDIRACVEsAGAVPAL 535


                   ....
gi 2462570427  789 INLL 792
Cdd:PLN03200   536 LWLL 539
 
Name Accession Description Interval E-value
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
526-696 1.08e-19

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 90.40  E-value: 1.08e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427 526 INVSDEAGYTIFHHAALHNRVSIICQLCNANFKVNQRrfvtFSQGPTPLHLAAQACSLETTVCLLCSKADYTLSEKRGWM 605
Cdd:COG0666    80 INAKDDGGNTLLHAAARNGDLEIVKLLLEAGADVNAR----DKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDGNT 155

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427 606 PIHFAAFYDNVCIIIAlcrkdpsLLEA----EATAENQCTPLLLAATSGALDTIQYLFSIGANWRKTDIKGNNIIHLSVL 681
Cdd:COG0666   156 PLHLAAANGNLEIVKL-------LLEAgadvNARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDNDGKTALDLAAE 228

                         170
                  ....*....|....*
gi 2462570427 682 TFHTEVLKYIIKLNI 696
Cdd:COG0666   229 NGNLEIVKLLLEAGA 243
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
526-696 8.26e-17

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 81.92  E-value: 8.26e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427 526 INVSDEAGYTIFHHAALHNRVSIICQLCNANFKVNQRRfvtfSQGPTPLHLAAQACSLETTVCLLCSKADYTLSEKRGWM 605
Cdd:COG0666   113 VNARDKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQD----NDGNTPLHLAAANGNLEIVKLLLEAGADVNARDNDGET 188

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427 606 PIHFAAFYDNVCIIIALCRK--DPslleaEATAENQCTPLLLAATSGALDTIQYLFSIGANWRKTDIKGNNIIHLSVLTF 683
Cdd:COG0666   189 PLHLAAENGHLEIVKLLLEAgaDV-----NAKDNDGKTALDLAAENGNLEIVKLLLEAGADLNAKDKDGLTALLLAAAAG 263

                         170
                  ....*....|...
gi 2462570427 684 HTEVLKYIIKLNI 696
Cdd:COG0666   264 AALIVKLLLLALL 276
Ank_2 pfam12796
Ankyrin repeats (3 copies);
574-669 6.76e-10

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 56.66  E-value: 6.76e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427 574 LHLAAQACSLETTVCLLCSKADYTLSEKRGWMPIHFAAFYDNVCIIIALCRKDPSLLEaeataENQCTPLLLAATSGALD 653
Cdd:pfam12796   1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEHADVNLK-----DNGRTALHYAARSGHLE 75

                          90
                  ....*....|....*.
gi 2462570427 654 TIQYLFSIGANWRKTD 669
Cdd:pfam12796  76 IVKLLLEKGADINVKD 91
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 731-771 6.09e-06

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 43.60  E-value: 6.09e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 2462570427 731 NDQYWRCILDAGTIPALINLLKSSKIKLQCKTVGLLSNIST 771
Cdd:pfam00514   1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLAA 41
Ank_4 pfam13637
Ankyrin repeats (many copies);
641-692 8.86e-06

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 43.80  E-value: 8.86e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2462570427 641 TPLLLAATSGALDTIQYLFSIGANWRKTDIKGNNIIHLSVLTFHTEVLKYII 692
Cdd:pfam13637   3 TALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
571-693 2.50e-05

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 46.87  E-value: 2.50e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427 571 PTPLHLAAQACSLETTVCLLCSKADYTLSEKRGWMPIHFAAFYDNVCIIIALCRKDpslLEAEATAENQCTPLLLAATSG 650
Cdd:COG0666    22 ALLLLAAALLLLLLLLLLLLLALLALALADALGALLLLAAALAGDLLVALLLLAAG---ADINAKDDGGNTLLHAAARNG 98

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 2462570427 651 ALDTIQYLFSIGANWRKTDIKGNNIIHLSVLTFHTEVLKYIIK 693
Cdd:COG0666    99 DLEIVKLLLEAGADVNARDKDGETPLHLAAYNGNLEIVKLLLE 141
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 738-770 4.12e-05

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 41.26  E-value: 4.12e-05
                           10        20        30
                   ....*....|....*....|....*....|...
gi 2462570427  738 ILDAGTIPALINLLKSSKIKLQCKTVGLLSNIS 770
Cdd:smart00185   8 VVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
Ank_2 pfam12796
Ankyrin repeats (3 copies);
643-693 1.06e-04

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 41.64  E-value: 1.06e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2462570427 643 LLLAATSGALDTIQYLFSIGANWRKTDIKGNNIIHLSVLTFHTEVLKYIIK 693
Cdd:pfam12796   1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLE 51
Ank_2 pfam12796
Ankyrin repeats (3 copies);
526-598 1.65e-04

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 41.25  E-value: 1.65e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462570427 526 INVSDEAGYTIFHHAALHNRVSIICQLCNanfKVNQRRfvtFSQGPTPLHLAAQACSLETTVCLLCSKADYTL 598
Cdd:pfam12796  23 ANLQDKNGRTALHLAAKNGHLEIVKLLLE---HADVNL---KDNGRTALHYAARSGHLEIVKLLLEKGADINV 89
SRP1 COG5064
Karyopherin (importin) alpha [Intracellular trafficking and secretion];
686-823 1.67e-04

Karyopherin (importin) alpha [Intracellular trafficking and secretion];


Pssm-ID: 227396 [Multi-domain]  Cd Length: 526  Bit Score: 45.27  E-value: 1.67e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427 686 EVLKYIIKLNIPelpvwKTLVEMLQCESYKRRMMAVMSLEVICLANDQYWRCILDAGTIPALINLLKSSKIKLQCKTVGL 765
Cdd:COG5064   276 EKIQAVLDVGIP-----GRLVELLSHESAKIQTPALRSVGNIVTGSDDQTQVIINCGALKAFRSLLSSPKENIRKEACWT 350

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427 766 LSNIST-HKSAVHALVEAGGIPSLINLLVCDEPEVHSR-CAVILYDIAQCENKDVIAKYM 823
Cdd:COG5064   351 ISNITAgNTEQIQAVIDANLIPPLIHLLSSAEYKIKKEaCWAISNATSGGLNRPDIIRYL 410
PHA02875 PHA02875
ankyrin repeat protein; Provisional
 537-664 1.73e-04

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 44.98  E-value: 1.73e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427 537 FHHAALHNRVSIICQLCNANFKVNQrrfVTFSQGPTPLHLAAQACSLETTVCLLCSKADYTLSEKRGWMPIHFAAFYDNV 616
Cdd:PHA02875   72 LHDAVEEGDVKAVEELLDLGKFADD---VFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDI 148

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2462570427 617 CIIialcrkdPSLLEAEATAENQ----CTPLLLAATSGALDTIQYLFSIGAN 664
Cdd:PHA02875  149 KGI-------ELLIDHKACLDIEdccgCTPLIIAMAKGDIAICKMLLDSGAN 193
PHA02874 PHA02874
ankyrin repeat protein; Provisional
 521-636 1.77e-04

ankyrin repeat protein; Provisional


Pssm-ID: 165205 [Multi-domain]  Cd Length: 434  Bit Score: 44.95  E-value: 1.77e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427 521 TSSSTINVSDEAGYTIFHHAALHNRvSIICQLCNaNFKVNqrrfVTFSQGPTPLHLAAQ-ACSLETTVCLLCSKADYTLS 599
Cdd:PHA02874  211 DHGNHIMNKCKNGFTPLHNAIIHNR-SAIELLIN-NASIN----DQDIDGSTPLHHAINpPCDIDIIDILLYHKADISIK 284

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 2462570427 600 EKRGWMPIHFAAFYDNvciiialcrKDPSLLEAEATA 636
Cdd:PHA02874  285 DNKGENPIDTAFKYIN---------KDPVIKDIIANA 312
Ank_4 pfam13637
Ankyrin repeats (many copies);
572-622 1.88e-04

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 39.95  E-value: 1.88e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2462570427 572 TPLHLAAQACSLETTVCLLCSKADYTLSEKRGWMPIHFAAFYDNVCIIIAL 622
Cdd:pfam13637   3 TALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLL 53
Ank_5 pfam13857
Ankyrin repeats (many copies);
526-577 2.85e-03

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 36.56  E-value: 2.85e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2462570427 526 INVSDEAGYTIFHHAALHNRVSIICQLCNANFKVNQRRFvtfsQGPTPLHLA 577
Cdd:pfam13857   9 LNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDE----EGLTALDLA 56
HEAT COG1413
HEAT repeat [General function prediction only];
701-811 4.25e-03

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 38.46  E-value: 4.25e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427 701 VWKTLVEMLQCESYKRRMMAVMSLEVIClandqywrcilDAGTIPALINLLKSSKIKLQCKTVGLLSNISTHKS------ 774
Cdd:COG1413    17 AVPALIAALADEDPDVRAAAARALGRLG-----------DPRAVPALLEALKDPDPEVRAAAAEALGRIGDPEAvpalia 85

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2462570427 775 ------------AVHALVEAGG---IPSLINLLVCDEPEVHSRCAVILYDIA 811
Cdd:COG1413    86 alkdedpevrraAAEALGRLGDpaaVPALLEALKDPDWEVRRAAARALGRLG 137
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 710-792 5.96e-03

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 40.47  E-value: 5.96e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427  710 QCESYKRRMMAVMSLEViclaNDQYWrCILDAGTIPALINLLKSSKIKLQCKTVGLLSNISTHKSAVHALVE-AGGIPSL 788
Cdd:PLN03200   461 QQQEYAVALLAILTDEV----DESKW-AITAAGGIPPLVQLLETGSQKAKEDSATVLWNLCCHSEDIRACVEsAGAVPAL 535


                   ....
gi 2462570427  789 INLL 792
Cdd:PLN03200   536 LWLL 539
PHA03095 PHA03095
ankyrin-like protein; Provisional
 524-677 6.26e-03

ankyrin-like protein; Provisional


Pssm-ID: 222980 [Multi-domain]  Cd Length: 471  Bit Score: 40.01  E-value: 6.26e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427 524 STINVSDEAGYTIFH---HAALHNRVSIICQLCNANFKVNQRRfvtfSQGPTPLHLAAQACSLETTVCLLCSK-ADYTLS 599
Cdd:PHA03095   38 ADVNFRGEYGKTPLHlylHYSSEKVKDIVRLLLEAGADVNAPE----RCGFTPLHLYLYNATTLDVIKLLIKAgADVNAK 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462570427 600 EKRGWMPIH--FAAFYDNVCIIIALCRKDPSLleaEATAENQCTPL--LLAATSGALDTIQYLFSIGANWRKTDIKGNNI 675
Cdd:PHA03095  114 DKVGRTPLHvyLSGFNINPKVIRLLLRKGADV---NALDLYGMTPLavLLKSRNANVELLRLLIDAGADVYAVDDRFRSL 190


                  ..
gi 2462570427 676 IH 677
Cdd:PHA03095  191 LH 192
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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